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Conserved domains on  [gi|1526552|dbj|BAA07463|]
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FLI-1, partial [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Ets super family cl02599
Ets-domain;
3-23 8.48e-08

Ets-domain;


The actual alignment was detected with superfamily member smart00413:

Pssm-ID: 470627  Cd Length: 87  Bit Score: 42.64  E-value: 8.48e-08
                          10        20
                  ....*....|....*....|.
gi 1526552      3 QIQLWQFLLELLSDSANASCI 23
Cdd:smart00413  1 GIQLWQFLLDLLLDPENSDII 21
 
Name Accession Description Interval E-value
ETS smart00413
erythroblast transformation specific domain; variation of the helix-turn-helix motif
3-23 8.48e-08

erythroblast transformation specific domain; variation of the helix-turn-helix motif


Pssm-ID: 197710  Cd Length: 87  Bit Score: 42.64  E-value: 8.48e-08
                          10        20
                  ....*....|....*....|.
gi 1526552      3 QIQLWQFLLELLSDSANASCI 23
Cdd:smart00413  1 GIQLWQFLLDLLLDPENSDII 21
Ets pfam00178
Ets-domain;
5-24 2.15e-06

Ets-domain;


Pssm-ID: 459700  Cd Length: 80  Bit Score: 39.02  E-value: 2.15e-06
                         10        20
                 ....*....|....*....|
gi 1526552     5 QLWQFLLELLSDSANASCIT 24
Cdd:pfam00178  1 QLWQFLLDLLTDPEYSDIIK 20
 
Name Accession Description Interval E-value
ETS smart00413
erythroblast transformation specific domain; variation of the helix-turn-helix motif
3-23 8.48e-08

erythroblast transformation specific domain; variation of the helix-turn-helix motif


Pssm-ID: 197710  Cd Length: 87  Bit Score: 42.64  E-value: 8.48e-08
                          10        20
                  ....*....|....*....|.
gi 1526552      3 QIQLWQFLLELLSDSANASCI 23
Cdd:smart00413  1 GIQLWQFLLDLLLDPENSDII 21
Ets pfam00178
Ets-domain;
5-24 2.15e-06

Ets-domain;


Pssm-ID: 459700  Cd Length: 80  Bit Score: 39.02  E-value: 2.15e-06
                         10        20
                 ....*....|....*....|
gi 1526552     5 QLWQFLLELLSDSANASCIT 24
Cdd:pfam00178  1 QLWQFLLDLLTDPEYSDIIK 20
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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