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Conserved domains on  [gi|2208839|dbj|BAA20489|]
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peptide/histidine transporter [Rattus norvegicus]

Protein Classification

solute carrier 15 family transporter( domain architecture ID 13023890)

solute carrier 15 (SLC15) family transporter is proton-coupled amino-acid transporter; similar to solute carrier family 15 member 3 and solute carrier family 15 member 4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
25-555 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 701.55  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   25 RAACGAVLLAELLERAAFYGVTANLVLFLNGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALY 104
Cdd:cd17348   1 RAACAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  105 LLGMLAFPLLAAPrsrsflcgdphpelvrncsapfpngtavcpdaaarrcapATFAGLVLVGLGVATVKANITPFGADQV 184
Cdd:cd17348  81 LLGMLLFPATAAP---------------------------------------ALYAGLLLVGLGVGSVKANITPFGADQV 121
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  185 KDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmfri 264
Cdd:cd17348 122 KDRGPEATRRFFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI--------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  265 ltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ 344
Cdd:cd17348 187 ------------------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQ 218
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  345 SLHLKIPEI-----SSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAG 419
Cdd:cd17348 219 SLHLKIPNIfisniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAG 298
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESKRLDLVKEKTINQT-IGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIG 498
Cdd:cd17348 299 ILESKRLEIVKHNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVG 378
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 2208839  499 SFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVK 555
Cdd:cd17348 379 SFVGSGLLALVSIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
25-555 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 701.55  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   25 RAACGAVLLAELLERAAFYGVTANLVLFLNGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALY 104
Cdd:cd17348   1 RAACAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  105 LLGMLAFPLLAAPrsrsflcgdphpelvrncsapfpngtavcpdaaarrcapATFAGLVLVGLGVATVKANITPFGADQV 184
Cdd:cd17348  81 LLGMLLFPATAAP---------------------------------------ALYAGLLLVGLGVGSVKANITPFGADQV 121
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  185 KDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmfri 264
Cdd:cd17348 122 KDRGPEATRRFFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI--------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  265 ltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ 344
Cdd:cd17348 187 ------------------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQ 218
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  345 SLHLKIPEI-----SSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAG 419
Cdd:cd17348 219 SLHLKIPNIfisniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAG 298
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESKRLDLVKEKTINQT-IGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIG 498
Cdd:cd17348 299 ILESKRLEIVKHNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVG 378
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 2208839  499 SFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVK 555
Cdd:cd17348 379 SFVGSGLLALVSIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
147-517 2.56e-108

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 330.05  E-value: 2.56e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    147 PDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTG 226
Cdd:pfam00854  24 PSLRPPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    227 YLIPTVCVAIAFLVFLCGQSVFITKPPDGSAFTDMFRILTYSCCSQRgGQRRSGEGLGVFQQSSKHSLFDSCK---MSRG 303
Cdd:pfam00854 104 FGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVLPVAAWNKV-KLNGSSAGIKKLHWLDWARELDALIilgIVVP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    304 GPF-----TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQS--LHLKIpeissittTHHTLPAAWLTMFDAVLI 376
Cdd:pfam00854 183 GIFfniwcTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQArtMNRKI--------GSFEIPPAQFQAFNAILV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    377 LLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTiggvvyhaADLPIWWQIPQ 456
Cdd:pfam00854 255 LIFIPIFDRLVYPLGRKCTGGLTPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPEFPIAQE--------VPISVLWLIPQ 326
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839    457 YVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALV-----SLKAIGWM 517
Cdd:pfam00854 327 YLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTakptnVLGAYGWL 392
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
33-490 8.75e-36

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 139.95  E-value: 8.75e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   33 LAELLERAAFYGVTANLVLFL----NGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGM 108
Cdd:COG3104  21 FTEMWERFSFYGMRAILVLYLtaslADGGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGH 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  109 LafpLLAAPRSRSFLcgdphpelvrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPF------GAD 182
Cdd:COG3104 101 F---LLALPGGVTLF-----------------------------------YLGLALIAVGNGLFKPNISSLvgqlydPGD 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  183 QVKDRGpeatrrfFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVF--ITKPPDGSAFTD 260
Cdd:COG3104 143 PRRDAG-------FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLgdIGLEPDNPLSKK 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  261 MFRILTYSCCSQRGGQRRsgeGLGVFQQSSKHSLFDSCKMSRGGPFTEDK---VEDVKALVKIVPVFLALIPYWTVYFQM 337
Cdd:COG3104 216 ERLIAVALGALLLVLVLA---GLLSNANIANYLLYVIAIIAYFIFILRSKkltKEERKRLLAILILFLFSIVFWALYEQA 292
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  338 QTTYVLQSLHLKIPEISSIttthhTLPAAWLTMFDAVLILLLIPLKDKLVDPvLRRHGLLPSSLKRIAVGMFFVTCS--- 414
Cdd:COG3104 293 GTSLNLFADRNVDRSLFGF-----EIPPSWFQSLNPLFIIILAPVFAALWTK-LGKRGKEPSTPTKFALGLLLLGLGflv 366
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2208839  415 -AFAAGILESkrldlvkektinqtiGGVVyhaadlPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGL 490
Cdd:COG3104 367 mALAALLAGA---------------GGKV------SPLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGL 422
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
42-424 6.92e-17

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 84.04  E-value: 6.92e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839     42 FYGVTANLVLFLngapFNWEGAQASQALLL---FMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPR 118
Cdd:TIGR00926   3 YYGMRTILVLYF----LNFLGFSESTSTVLfhtFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    119 SrsflcGDPHPELVrncsapfpngtavcpdaaarrcapaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNW 198
Cdd:TIGR00926  79 S-----GHPLHDLL-------------------------DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSF 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    199 FYWSINLGAILSLGGIAYIQQNVS-------FLTGYLIPTVCVAIAFLVFLCGQSVFITKPPDGS-AFTDMFRILTYSCC 270
Cdd:TIGR00926 129 FYFAINAGSLISTIITPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNiVSKVIKCIVTALRK 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    271 SQRggqRRSGEglgvfqQSSKHSLFDSCKMSRggpfteDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHL-- 348
Cdd:TIGR00926 209 RFS---TRSEH------WPLHWLDYAKDKHDI------RMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMdg 273
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839    349 KIPEISSITTTHHTLpaawltmfDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESK 424
Cdd:TIGR00926 274 DVGGFEIQPDQMQVV--------NPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341
PRK15462 PRK15462
dipeptide permease;
31-248 7.87e-05

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 45.32  E-value: 7.87e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:PRK15462  14 VVALQIWEYFSFYGMRALLILYLTNQ-LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   111 fpLLAAPRSRSFLcgdphpelvrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPFGADQVKdrgPE 190
Cdd:PRK15462  93 --LGASEIHPSFL-----------------------------------YLSLAIIVCGYGLFKSNVSCLLGELYE---PT 132
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   191 ATRR--FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVF 248
Cdd:PRK15462 133 DPRRdgGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192
 
Name Accession Description Interval E-value
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
25-555 0e+00

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 701.55  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   25 RAACGAVLLAELLERAAFYGVTANLVLFLNGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALY 104
Cdd:cd17348   1 RAACAAVLLVELLERAAFYGITSNLVLFLNGSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  105 LLGMLAFPLLAAPrsrsflcgdphpelvrncsapfpngtavcpdaaarrcapATFAGLVLVGLGVATVKANITPFGADQV 184
Cdd:cd17348  81 LLGMLLFPATAAP---------------------------------------ALYAGLLLVGLGVGSVKANITPFGADQV 121
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  185 KDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmfri 264
Cdd:cd17348 122 KDRGPEATRRFFNWFYWSINLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFLCGQPVFI--------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  265 ltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ 344
Cdd:cd17348 187 ------------------------------------------------DVKALVKILPVFLALIPYWTVYFQMQTTYVLQ 218
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  345 SLHLKIPEI-----SSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAG 419
Cdd:cd17348 219 SLHLKIPNIfisniAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKRRGLLPSSLKRIAVGMFFVMCSAIAAG 298
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESKRLDLVKEKTINQT-IGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIG 498
Cdd:cd17348 299 ILESKRLEIVKHNTTIQQqIGNVTYYAADLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVG 378
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 2208839  499 SFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVK 555
Cdd:cd17348 379 SFVGSGLLALVSIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIISVK 435
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
28-555 3.33e-144

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 423.00  E-value: 3.33e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   28 CGAVLLAELLERAAFYGVTANLVLFLNGAPFnWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLG 107
Cdd:cd06175   1 CAMILLIELCERFTFYGIGANLVPFLTGALG-LGNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  108 MLAFPLLAAPRSRSFLCGDPHPelvrncsapfpngtavcPDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDR 187
Cdd:cd06175  80 VAILTVSTIPPGLRPLRCNPSH-----------------CEQASGIQLTGFYAALYLIALGTGGVKANVSPLGADQFDER 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  188 GPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFlcgqsvfitkppdgsaftdmfrilty 267
Cdd:cd06175 143 GPSKTQSFFNWFYFCINVGSLLAMLGTPYIQDNVGWAAAYGIPFVAILLALVVF-------------------------- 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  268 sccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLH 347
Cdd:cd06175 197 ---------------------------------------------EVKQLLRALPLFAFCILFWTVYAQMTTSYVLQALT 231
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  348 LKIPeissitTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESKRLD 427
Cdd:cd06175 232 LVRS------TGLFTIPPASMQAFNPILLLLLIPVLDKVVYPLIRRYGVGLSPLTKIGLGFFFGSLSMFVAGFLELKRLN 305
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  428 LVKEKtinqtigGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLA 507
Cdd:cd06175 306 TAHAH-------GPVVTTSPLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLVT 378
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*...
gi 2208839  508 LVSLKAIGWMsshtDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVK 555
Cdd:cd06175 379 LVSKPTDGAH----IADDLNKGVLTNFFFLLAVLAALNFLIFLLVSRK 422
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
147-517 2.56e-108

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 330.05  E-value: 2.56e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    147 PDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTG 226
Cdd:pfam00854  24 PSLRPPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEETDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    227 YLIPTVCVAIAFLVFLCGQSVFITKPPDGSAFTDMFRILTYSCCSQRgGQRRSGEGLGVFQQSSKHSLFDSCK---MSRG 303
Cdd:pfam00854 104 FGLPAVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVLPVAAWNKV-KLNGSSAGIKKLHWLDWARELDALIilgIVVP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    304 GPF-----TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQS--LHLKIpeissittTHHTLPAAWLTMFDAVLI 376
Cdd:pfam00854 183 GIFfniwcTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQArtMNRKI--------GSFEIPPAQFQAFNAILV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    377 LLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTiggvvyhaADLPIWWQIPQ 456
Cdd:pfam00854 255 LIFIPIFDRLVYPLGRKCTGGLTPLQKMAVGLFLASLAFAIAAIVQLKRNDTGPEFPIAQE--------VPISVLWLIPQ 326
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839    457 YVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALV-----SLKAIGWM 517
Cdd:pfam00854 327 YLLIGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTakptnVLGAYGWL 392
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
31-553 6.58e-84

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 268.72  E-value: 6.58e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVLFLNGaPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:cd17351   4 ILGNEFAERLAFYGIAVNLVTYLTK-VMHLSNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLVGLIL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  111 FPLLAAprSRSFLCGDPHPELVrnCSAPFPNGTAVCpdaaarrcapatFAGLVLVGLGVATVKANITPFGADQVKDRGPE 190
Cdd:cd17351  83 LTLSAS--VPSLRPPPCNPDSP--CEPASSTQLTVL------------YVGLYLIALGTGGIKPCVSAFGADQFDETDPK 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  191 ATR---RFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGqsvfitkppdgsafTDMFRilty 267
Cdd:cd17351 147 EKKqkpSFFNWFYFSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAG--------------TPFYR---- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  268 sccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLH 347
Cdd:cd17351 209 ---------------------------------------------EVKCLLRLLPIWATTILLSTVYAQMQTFFVQQGLT 243
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  348 LKIPEISSITtthhtLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR-----HGLlpSSLKRIAVGMFFVTCSAFAAGILE 422
Cdd:cd17351 244 MDRRLGGSFE-----IPAASLSVFSTLFVLLFIPLYDRVFVPFARRytgnpRGI--TPLQRIGIGLVLSILAMAVAALVE 316
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  423 SKRLDLVKEKTINQTIGGVVyhaaDLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVG 502
Cdd:cd17351 317 VKRLRVARAHGLLDSPTGVV----PMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLS 392
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839  503 SGLLALVS-----LKAIGWMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVS 553
Cdd:cd17351 393 SALVTIVNkitgkGGGPGWLPN-----NLNKGRLDYFYWLLAVLSAVNFLVFLVCA 443
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
27-556 1.19e-66

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 223.68  E-value: 1.19e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   27 ACGAVLLAELLERAAFYGVTANLVLFLNGaPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLL 106
Cdd:cd17417   3 ACSFIIGIEVAERFAYYGIASNLVTYLTT-PLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYLL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  107 GMLAFPLLAaprsrsflcgdphpelvrncSAPfpngtAVCPDAAARRCAPAT-------FAGLVLVGLGVATVKANITPF 179
Cdd:cd17417  82 GLVLLTLSA--------------------SLP-----SLKPPECNGTCSKAStlqvaffFFSLYLVAIGQGGHKPCVQAF 136
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  180 GADQVKDRGP-EATRR--FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQsvfitkppdgs 256
Cdd:cd17417 137 GADQFDEDDPkEKKQKssFFNWWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGT----------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  257 aftdmfriltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggPFTEDKVEDVKALVKIVPVFLALIPYWTVYFQ 336
Cdd:cd17417 206 ------------------------------------------------PLYRYKVEEVKLVLRLIPIWFTTLVFTVVFAQ 237
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  337 MQTTYVLQSLHLKipeisSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR-----HGLlpSSLKRIAVGMFFV 411
Cdd:cd17417 238 SPTFFTKQGVTMD-----RTIGPNFKIPPASLQSFITLSILISIPIYDRVFVPIARKitgnpRGI--TLLQRIGIGMFLS 310
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  412 TCSAFAAGILESKRLDLVKEKTINQTIGGVvyhaaDLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLF 491
Cdd:cd17417 311 ILAMVIAALVEMKRLKVAKEHGLISPKATV-----PMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALY 385
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839  492 FFFSGIGSFVGSGLLALVSlKAIGWMSSHTDFG-NINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556
Cdd:cd17417 386 LSVFGVGSFLSSFLISIVD-KITSSSGGQSWFNnNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSY 450
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
27-556 2.38e-63

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 214.64  E-value: 2.38e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   27 ACGAVLLAELLERAAFYGVTANLVLFLNgAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLL 106
Cdd:cd17418   3 ACPFILGNECCERLAYYGIATNLITYLT-KELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYFI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  107 GMLAFPLLAAPrsrsflcgdphPELvrncsAPFPNGTAVCPDAAARRCApATFAGLVLVGLGVATVKANITPFGADQVKD 186
Cdd:cd17418  82 GMVLLTLSASV-----------PGL-----KPASCIGSLCPPATSVQYA-VFFLGLYLIALGTGGIKPCVSSFGADQFDD 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  187 RGPEATRR---FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGqsvfitkppdgsafTDMFR 263
Cdd:cd17418 145 TDPKEKVRkssFFNWFYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFG--------------TPLYR 210
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  264 iltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVL 343
Cdd:cd17418 211 -------------------------------------------------EVKILIRLLPIWASGIVFATVYSQMSTMFVQ 241
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  344 QSLHLKipeiSSITTTHhtLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLP---SSLKRIAVGMFFVTCSAFAAGI 420
Cdd:cd17418 242 QGRTMD----RMGGNFE--IPPASLSLFDTLSVLIWVPIYDRFIVPLVRKFTGHErgfTQLQRMGIGLFISVLSMVAAAI 315
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  421 LESKRLDLVKekTINQTIGGVVYHaadLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSF 500
Cdd:cd17418 316 VEIVRLQLAR--THNLVESGPPVP---MSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNY 390
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2208839  501 VGSGLLALVSL-----KAIGWMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556
Cdd:cd17418 391 LSSLIVTLVTYvttkgGKPGWIPD-----NLNNGHLDYFFWLLASLSFLNILVYLWIAKRY 446
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
26-553 1.18e-61

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 210.39  E-value: 1.18e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   26 AACGAVLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYL 105
Cdd:cd17413   2 KSAALILGIEMCERLTTLGIGVNLVTYLTGT-MHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  106 LGMLAFPLLAA-PRSRsflcgdPHPelvrncsapfpngtavCPDAAARRCAPAT-------FAGLVLVGLGVATVKANIT 177
Cdd:cd17413  81 LGVLVLTLSTTlPSLR------PPP----------------CNHTTSHHCEPASgiqltvlYLALYLIALGTGGIKSSVS 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  178 PFGADQVKDRGPEATRR---FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGqsvfitkppd 254
Cdd:cd17413 139 GFGSDQFDENDPKERKLmsyFFNRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAG---------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  255 gsafTDMFRiltysccsqrggqrrsgeglgvFQQSSKHSlfdsckmsrggpftedKVEDVKALVKIVPVFLALIPYWTVY 334
Cdd:cd17413 209 ----TKRYR----------------------FKKSIGST----------------QVEEVKMVVRMLPIWATTILFWTVY 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  335 FQMQTTYVLQSLHLKIPEISsittthHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR-----HGLlpSSLKRIAVGMF 409
Cdd:cd17413 247 AQMTTFSVEQAETMDRNIGS------FEIPPASMAVFLVATILLTTAVYDRVIVPLCRKltghpQGL--TTLQRIGVGLV 318
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  410 FVTCSAFAAGILESKRLDLVKEKTINQtiggvvyhaADLPI--WWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAI 487
Cdd:cd17413 319 FSCLAMAVAALVELKRLRIAHAHGKPV---------KTVPMsvFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMS 389
                       490       500       510       520       530       540       550
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2208839  488 MGLFFFFSGIGSFVGSGLLALV-----SLKAIGWMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVS 553
Cdd:cd17413 390 TGLFLSTLSLGFFVSSFLVSIVnrvtgKSHPHGWLAD-----NLNKGRLDYFYWLLAVLSALNFVIFLVFA 455
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
31-554 6.53e-58

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 200.29  E-value: 6.53e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:cd17419   7 ILVNQGLATLAYFGVGVNLVLYLTRV-MHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFVIGLLL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  111 FPLLAA-PRSRSFLCGDphpelvrncsapfpnGTAVCPDAAARRCAPATFAgLVLVGLGVATVKANITPFGADQVKDRGP 189
Cdd:cd17419  86 LTLSSAlPSLRPPQCGD---------------GDLKCPPASAAQTTFLYFS-LYLIALGYGGYQPCIATLGADQFDDEDP 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  190 EATRR---FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGqsvfitkppdgsafTDMFRilt 266
Cdd:cd17419 150 IEKASksaFFSYFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAG--------------TPFYR--- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  267 ysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ-- 344
Cdd:cd17419 213 ----------------------------------------------EVKCILRLLPIWLSTIIYSVVYTQMATLFVEQga 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  345 --SLHLKIPEIssittthhtlPAAWLTMFDAVLILLLIPLKDKLVDPVLRR---HGLLPSSLKRIAVGMFFVTCSAFAAG 419
Cdd:cd17419 247 amDTSFGNFKI----------PPASMSVFEILSVAVGTVLYRKFLVPLLRKvtgHPKGITELQRMGIGLVIGILAMVVAA 316
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESKRLDLVKEKTINQTIGGVvyhaaDLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGS 499
Cdd:cd17419 317 LVEIQRLKVARPSNLDDPTSPS-----PLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGN 391
                       490       500       510       520       530       540
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  500 FVGSGLLALV-----SLKAIGWMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVSV 554
Cdd:cd17419 392 YLSSLLVTIVnkvttKDGSPGWIPD-----NLNKGHLDRFYWLLAALSGIDFVVFLICAK 446
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
35-556 4.01e-57

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 197.87  E-value: 4.01e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   35 ELLERAAFYGVTANLVLFLNgAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLL 114
Cdd:cd17416   8 ETGEKLASYGLLANLIVYLI-EEYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMVLLTLT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  115 AA-PRSRSFLCGDPHPelvrNCSAPFPNGTAVcpdaaarrcapaTFAGLVLVGLGVATVKANITPFGADQVKDR---GPE 190
Cdd:cd17416  87 AAiPSLRPPPCETASS----LCQSPSKLQLAV------------LYSALALLSIGAGGIRPCSLAFGADQFDKKtesGKR 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  191 ATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFitkppdgsaftdmfriltyscc 270
Cdd:cd17416 151 GLESFFNWYYFTFTVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLY---------------------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  271 sqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSL---- 346
Cdd:cd17416 209 ---------------------------------------VVEDLKSLIRVIPIWSTGIILSLAMAQQMSLTVLQALvmdr 249
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  347 HLkipeissitTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR---HGLLPSSLKRIAVGMFFVTCSAFAAGILES 423
Cdd:cd17416 250 HL---------GPSFQIPAGSITVFLLITLTIFIPLYDRVLVPLLRKitgRGRGLTLLQRVGIGIVFSILSMAVAAIVER 320
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  424 KRLDLVkektINQTIGGVvyhaaDLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGS 503
Cdd:cd17416 321 KRRKTA----LTQGNGTS-----PMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSS 391
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 2208839  504 GLLALV-----SLKAIGWMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556
Cdd:cd17416 392 ALISAVhrttgRGGGGSWLPD-----DINKGRLDYVYWLLAGLGALNLGYFLVCSWRY 444
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
35-556 1.12e-54

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 190.91  E-value: 1.12e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   35 ELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLL 114
Cdd:cd17347  11 EFCERFSYYGMRAILVLYLTDF-LGFSEAEATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHIVLAVT 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  115 AAPRSrsflcGDPHPELVrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR 194
Cdd:cd17347  90 AIPPL-----GPPHVWGL--------------------------LIGLLLIAIGTGGIKPCVSAFGGDQFGADQQHLLAR 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  195 FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGY------LIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmfriltys 268
Cdd:cd17347 139 FFSWFYFAINAGSLLSTFLTPILRADVQFGGHDcyplafGVPGVLMAVATLVFWLGRKHYK------------------- 199
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  269 ccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHL 348
Cdd:cd17347 200 --------------------------------------------DVKALLRVLVLFIPLPVFWALFDQQGSRWTLQAEQM 235
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  349 kipeisSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESK-RLD 427
Cdd:cd17347 236 ------DGLVGGFTILPDQMQALNPILILILIPLFDYVIYPLLERCGIPLTPLRKMGVGMILAALAFVIAGFLQLRiDGG 309
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  428 LVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLffffsgigsfvgsglla 507
Cdd:cd17347 310 LPGQPDPGEVTTFEDIEPNSVSILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAA----------------- 372
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 2208839  508 lvslkaigWMSShTDFGN-----INSCHLH----YYFFLLAAIQGATLLLFLIVSVKY 556
Cdd:cd17347 373 --------WLLT-VALGNlivviVAELIQFssqaAEYFFFAGLMLVVAVVFALLARFY 421
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
27-550 6.95e-50

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 178.76  E-value: 6.95e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   27 ACGAVLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLL 106
Cdd:cd17414   3 AAFFVLVVEALENMAYLANANNLVTYLINN-MHYSLAKSANIVTNFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  107 GMLAFPLLAA-PRSRSFLCgdpHPELVRNCSAPFPNGTAVcpdaaarrcapaTFAGLVLVGLGVATVKANITPFGADQVK 185
Cdd:cd17414  82 GLILLTVQAHiPSLQPPSC---NSLGDLTCKEPSGSQAAI------------LFVGLYLVALGVGCIKPNLPSHGADQFD 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  186 DRGPEATRR---FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGqsvfitkppdgsafTDMF 262
Cdd:cd17414 147 ENDPKGRRQlssFFNWYYFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAG--------------TPFY 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  263 RILTysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYV 342
Cdd:cd17414 213 RNKT-------------------------------------------QVEEVKIVLKMLPIFACTIILNCILAQLQTFSV 249
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  343 LQSLHLKIPEISSITtthhtLPAAWLTMFDAVLILLLIPLKDKLVDPVLRR---HGLLPSSLKRIAVGMFFVTCSAFAAG 419
Cdd:cd17414 250 QQGSTMNRTKIGSFN-----IPPASLQAIPVIFMLILVPLYDHLLVPFARKitgHESGITHLQRIGIGLVLSTLSMVVAA 324
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESKRLDLVKEKtinqtigGVVYHAADLPI--WWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGI 497
Cdd:cd17414 325 LVETKRKKVAVEN-------GLLNSKENLPIsiFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSF 397
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....
gi 2208839  498 GSFVGSGLLALV-SLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFL 550
Cdd:cd17414 398 GFYLSSVLVSVVnKVTGSGGHGGWLLGENLNRDRLDLFYWLLCVLSTINFLNYL 451
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
35-551 1.12e-40

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 153.37  E-value: 1.12e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   35 ELLERAAFYGVTANLVLFLNgAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLL 114
Cdd:cd17415  11 EICERLASVGFHTNLITYLT-LQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQLGMVLLTIS 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  115 AAPRSRsflcgdpHPelvrncsaPFPNGTAVCPDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRR 194
Cdd:cd17415  90 AILPSL-------RP--------PPCNGHEVCACQASSAQLSILYLSLLLTALGSGGIRPCVVAFGADQFDESDPKQAKQ 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  195 ---FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmfriltysccs 271
Cdd:cd17415 155 twnFFNWYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVVGSPLYR---------------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  272 qrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQmQTTYVLQSLHlkip 351
Cdd:cd17415 213 -----------------------------------------ELKSIIRMLPIWAAGILLVTASSQ-QHTFSIQQAR---- 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  352 EISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSS---LKRIAVGMFFVTCSAFAAGILESKRldl 428
Cdd:cd17415 247 TMNRHLTPSFQIPPASMSVFGILSLLTTVPLYDRVLMPVARKFTGNERGitfLQRMGIGLFISILATVVAAFVEVKR--- 323
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  429 vkeKTINQTIGGVVYHAADLPI--WWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLL 506
Cdd:cd17415 324 ---KSVAANHGLLDRPHATVPIsvFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWSTISLGSYLSTLLV 400
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*
gi 2208839  507 ALVSlKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLI 551
Cdd:cd17415 401 TLVH-KETSRGGRWWLPNNLNRGRLDYFYWLVAVLQAVNLVYFLI 444
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
33-490 8.75e-36

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 139.95  E-value: 8.75e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   33 LAELLERAAFYGVTANLVLFL----NGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGM 108
Cdd:COG3104  21 FTEMWERFSFYGMRAILVLYLtaslADGGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGH 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  109 LafpLLAAPRSRSFLcgdphpelvrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPF------GAD 182
Cdd:COG3104 101 F---LLALPGGVTLF-----------------------------------YLGLALIAVGNGLFKPNISSLvgqlydPGD 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  183 QVKDRGpeatrrfFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVF--ITKPPDGSAFTD 260
Cdd:COG3104 143 PRRDAG-------FTIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIGMLIGLIIFLLGRKYLgdIGLEPDNPLSKK 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  261 MFRILTYSCCSQRGGQRRsgeGLGVFQQSSKHSLFDSCKMSRGGPFTEDK---VEDVKALVKIVPVFLALIPYWTVYFQM 337
Cdd:COG3104 216 ERLIAVALGALLLVLVLA---GLLSNANIANYLLYVIAIIAYFIFILRSKkltKEERKRLLAILILFLFSIVFWALYEQA 292
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  338 QTTYVLQSLHLKIPEISSIttthhTLPAAWLTMFDAVLILLLIPLKDKLVDPvLRRHGLLPSSLKRIAVGMFFVTCS--- 414
Cdd:COG3104 293 GTSLNLFADRNVDRSLFGF-----EIPPSWFQSLNPLFIIILAPVFAALWTK-LGKRGKEPSTPTKFALGLLLLGLGflv 366
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2208839  415 -AFAAGILESkrldlvkektinqtiGGVVyhaadlPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGL 490
Cdd:COG3104 367 mALAALLAGA---------------GGKV------SPLWLVLAYLLLTIGELCLSPVGLSMITKLAPARFAGQMMGL 422
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
25-490 1.23e-35

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 138.76  E-value: 1.23e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   25 RAACGAVLLAELLERAAFYGVTANLVLFLNGAPFNWE------GAQASQALL-LFMGLTYLGSPFGGWLADARLGRARAI 97
Cdd:cd17350   1 PWSAFLIAIVELCERFSYYGLTGPFQNYMQFGPDDSTpgalglGEQGATGLSnFFTFWCYVTPVIGAYVADQFLGRYNTI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   98 LLSLALYLLGMLAFPLLAAPrsrsflcgdphpelvrncsapfpngTAVCPDAAARRCAPAtfagLVLVGLGVATVKANIT 177
Cdd:cd17350  81 VCGAVIYFVGILILTCTSIP-------------------------SVIDAGAGLGGFVVA----IIIIGLGTGGIKSNVS 131
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  178 PFGADQVKDRGPE----------------ATRRFFNWFYWSINLGAiLSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVF 241
Cdd:cd17350 132 PLIADQLPKIKPYvktlkngervivdpvvTLSRIYMIFYWAINVGS-LSLLATTYLERTKGFWYAYLLPLCVFVIPLIIL 210
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  242 LCGQSVFITKPpdgSAFTDMFRiltysccsqrggqrrsgeglgvfqqsskhSLFDSCKmsrggpftedkvedvkalvkiv 321
Cdd:cd17350 211 AFGKKFYKIRP---DLFIDELK-----------------------------RALRACK---------------------- 236
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  322 pVFLALIPYWTVYFQMQTTYVLQSLHLKIpeissittthHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSL 401
Cdd:cd17350 237 -VFLFYPIYWVCYGQMTSNFISQAGQMQL----------HGVPNDLFQAFDSIALIIFIPILENIIYPLLRKYNIPFKPI 305
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  402 KRIAVGMFFVTCSAFAAGILESKrldlVKEKtinqtiGGVVYHA------ADLPIWWQIPQYVLIGISEIFASIAGLEFA 475
Cdd:cd17350 306 TRITLGFMFASFSMIYAAVLQAK----IYQA------GPCYANPtgtcspNDIHVWIQIPAYVLIAFSEIFASITGLEYA 375
                       490
                ....*....|....*
gi 2208839  476 YSAAPKSMQSAIMGL 490
Cdd:cd17350 376 YTKAPPSMKSFITAL 390
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
31-553 5.01e-34

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 134.11  E-value: 5.01e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:cd17349   7 LLLVELCERFTFFGIVCNMILFCTIK-LGYRNHQAAIVNLCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLGTAL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  111 FPLLAAPRSRSFLcgDPHPelvrncsapfpngtaVCPDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDRGPE 190
Cdd:cd17349  86 LPVVAFPFEDFYI--DTHH---------------IIHTLAKREQTLLFYVALLTASLGTGGIRAIVCPLSAYGLQDYGSR 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  191 ATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLvflcgqsvfitkppdgsaftdmfriltyscc 270
Cdd:cd17349 149 KLMSFFNWFYWLVNLNSAVVFVGISYIQQSVAKNLGFLIPFMSVLMALI------------------------------- 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  271 sqrggqrrsgeglgvfqqsskhslfdSCKMSRGgpftedKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHlki 350
Cdd:cd17349 198 --------------------------TLHMVRN------DLINTKNLVRLFPLFAFQILYRTCIMQIPSGYYLQTMN--- 242
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  351 peiSSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVL--RRHGLLPSSLkrIAVGMFFVTCSAFAAGILESKRLDL 428
Cdd:cd17349 243 ---SNLNLGGFLLPIAAMNVISIIPLLILAPFLEYFSSCLFssKRYGPFLSAC--IIAGHLCAALSVMVAGFSEIHRKRF 317
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  429 VKektINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLAL 508
Cdd:cd17349 318 PL---VEQTLSGKVLLVSSMPCFQLAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAGCFMGALLIQL 394
                       490       500       510       520
                ....*....|....*....|....*....|....*....|....*.
gi 2208839  509 VSLKAIG-WMSShtdfgNINSCHLHYYFFLLAAIQGATLLLFLIVS 553
Cdd:cd17349 395 VYLISEGnWFPN-----TLNKGNLERFFFFLASLMLLNALGFWRIS 435
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
31-487 3.29e-22

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 99.15  E-value: 3.29e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:cd17412   7 IVVNEFCERFSYYGMRAVLVLYFKYF-LRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAV 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  111 FPLLAaprsrsflcgdphpelVRNCSAPFPNGTavcPDAAARRCApATFAGLVLVGLGVATVKANITPFGADQVKDRGPE 190
Cdd:cd17412  86 MAVSA----------------IHDLTDANRDGT---PDNLTLHVA-LSMIGLLLIALGTGGIKPCVAAFGGDQFEEHQEK 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  191 ATRRFFNWFYWSINLGAILS--LGGIAYIQQ------NVSFLTGYLIPTVCVAIAFLVFLCGQSVFItkppdgsaftdmf 262
Cdd:cd17412 146 QRSRFFSIFYLSINAGSLLStiITPILRSQEcgihskQKCYPLAFGVPAALMVVALIVFILGSKMYK------------- 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  263 riltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkveDVKALVKIVPVFLALIPYWTVYFQMQTTYV 342
Cdd:cd17412 213 --------------------------------------------------QIKMVLKVLFLYIPLPMFWALFDQQGSRWT 242
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  343 LQSlhlkipeissiTTTHHTLPAA-----WLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFA 417
Cdd:cd17412 243 LQA-----------TTMDGNFGAIqiqpdQMQTVNPILIIIMVPIFDAVIYPLIKKCKINFTPLRKMTVGMFLAALAFVA 311
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  418 AGILEskrldlvkektinqtiggvvyhaadLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAI 487
Cdd:cd17412 312 AALLQ-------------------------IQMAWQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVL 356
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
31-487 1.57e-19

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 91.04  E-value: 1.57e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVL-FLNGapFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML 109
Cdd:cd17411   7 IVVNEFCERFSYYGMKAVLTLyFLSF--LHWDENLSTAIYHAFSGLCYFTPVLGALIADSWLGKFKTIIYLSIVYVVGHV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  110 AFPLLAAPrsrsfLCGDPHPELVrncsapfpngtavcpdaaarrcapATFAGLVLVGLGVATVKANITPFGADQVKDRGP 189
Cdd:cd17411  85 IKSVGAIP-----TVGDQQVHVV------------------------LSMIGLFLIALGTGGIKPCVAAFGGDQFEEEHA 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  190 EATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFLTG------YLIPTVCVAIAFLVFLCGQSVFitkppdgsaftdmfr 263
Cdd:cd17411 136 RERSKFFSIFYLSINAGSLISTFVTPILRGDVQCFGGdcyalaFGVPAALMVVALVVFIAGSGMY--------------- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  264 iltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkvEDVKALVKIVPVFLALIPYWTVYFQMQTTYVL 343
Cdd:cd17411 201 ------------------------------------------------KEVKMVTRVLFLYIPLPMFWALFDQQGSRWTL 232
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  344 QSLHLkipeisSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILES 423
Cdd:cd17411 233 QATRM------NDFGGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKCKINFTSLRKMATGMILAALAFAVAAAVEI 306
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2208839  424 KrldlvkektinqtiggvvyhaadlpIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAI 487
Cdd:cd17411 307 K-------------------------IAWQLPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVL 345
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
33-552 9.14e-18

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 85.70  E-value: 9.14e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   33 LAELLERAAFYGVTANLVLFLN---GAPFNweGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGML 109
Cdd:cd17346   9 FTEMWERFSYYGMRAILILYLTaqlGDGFS--EADAASIYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMALGYL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  110 AfpLLAAPRSRSFLcgdphpelvrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPF------GADQ 183
Cdd:cd17346  87 L--LALSPFSVSML-----------------------------------YLGLALIIVGNGLFKPNISSLvgklydENDP 129
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  184 VKDRGpeatrrfFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVFITKppdgsaftdmfr 263
Cdd:cd17346 130 RRDSG-------FSIFYMGINLGAFLAPLLCGTLGDNYGYHYGFGLAAVGMLLGLLIFLLGRKKLLER------------ 190
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  264 iltysccsqrggqrrsgeglgvfqqsskhslfdsckmsrggpftedkvedvKALVKIVPVFLALIPYWTVYFQMQTTYVL 343
Cdd:cd17346 191 ---------------------------------------------------KKMLAIIILFLFAVVFWAIYEQAGTSLAL 219
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  344 QSLHLKIPEISSITtthhtLPAAWLTMFDAVLILLLIPLKDKLVdPVLRRHGLLPSSLKRIAVGMFFVTCS----AFAAG 419
Cdd:cd17346 220 FADENVDRLLGGFT-----IPPSWFQSLNPLFIILLAPILAALW-TKLGKRGKDPSIPTKFALGLLLLGLSfllmVLAAS 293
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  420 ILESkrldlvkektinqtiGGVVyhaadlPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGS 499
Cdd:cd17346 294 FAGG---------------SGKV------SALWLVLSYFLQTLGELCLSPVGLSMITKLAPAKFAGFMMGLWFLASALGN 352
                       490       500       510       520       530
                ....*....|....*....|....*....|....*....|....*....|....
gi 2208839  500 FVGSGLLALVSLKAIGWMSSHTdfgninschLHYYFFLLAAIQ-GATLLLFLIV 552
Cdd:cd17346 353 ILAGYLAGFYAQPKDPLASALV---------YTDYFGLIGVIAlVAGIILLLLA 397
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
42-424 6.92e-17

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 84.04  E-value: 6.92e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839     42 FYGVTANLVLFLngapFNWEGAQASQALLL---FMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPR 118
Cdd:TIGR00926   3 YYGMRTILVLYF----LNFLGFSESTSTVLfhtFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    119 SrsflcGDPHPELVrncsapfpngtavcpdaaarrcapaTFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNW 198
Cdd:TIGR00926  79 S-----GHPLHDLL-------------------------DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSF 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    199 FYWSINLGAILSLGGIAYIQQNVS-------FLTGYLIPTVCVAIAFLVFLCGQSVFITKPPDGS-AFTDMFRILTYSCC 270
Cdd:TIGR00926 129 FYFAINAGSLISTIITPILRGDVGcfgcqdcYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNiVSKVIKCIVTALRK 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    271 SQRggqRRSGEglgvfqQSSKHSLFDSCKMSRggpfteDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHL-- 348
Cdd:TIGR00926 209 RFS---TRSEH------WPLHWLDYAKDKHDI------RMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMdg 273
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208839    349 KIPEISSITTTHHTLpaawltmfDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMFFVTCSAFAAGILESK 424
Cdd:TIGR00926 274 DVGGFEIQPDQMQVV--------NPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLK 341
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
35-490 3.59e-11

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 65.63  E-value: 3.59e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839     35 ELLERAAFYGVTANLVLFL-NGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYllgMLAFPL 113
Cdd:TIGR00924  19 ELWERFSYYGMQGILAVYLvQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL---MLGHFM 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    114 LAAPrsrsflcgdPHPELVrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPFGAdQVKDRgPEATR 193
Cdd:TIGR00924  96 LAMS---------IYPDLI--------------------------FYGLGTIAVGSGLFKANPSSMVG-KLYER-GDMPR 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    194 R--FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVF-----ITKPPDGSAFTDMFRILT 266
Cdd:TIGR00924 139 RdgGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLrdigsVPDPLSGQGKTYGKLLLA 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    267 YSCCSQRGGQrrsgEGLGVFQQSSKHSLFDSCKMSRGGPFTE-------DKVEDVKALVKIvPVFLALIPYWTVYFQMQT 339
Cdd:TIGR00924 219 LLAALALVFF----CAWLMHHVVIANILLMTVTLAVIIFFFRlafkprlDAVARNKMYAYI-VLFLEAVVFWVLYAQMPT 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    340 TYVLqslhlkipeiSSITTTHHTL-----PAAWLTMFDAVLILLLIPLKdKLVDPVLRRHGLLPSSLKRIAVGMFFVTCS 414
Cdd:TIGR00924 294 SLNF----------FADNNMHHEMlgmsvPVIWFQSLNPFWVVVGSPVL-AMIWTRLGRKGKDPTTPLKFTLGMLFCGAS 362
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    415 AFAA----GILESKRLdlvkektinqtiggvvyhaadLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGL 490
Cdd:TIGR00924 363 FLTFaasiWFADAGGL---------------------TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGM 421
PRK15462 PRK15462
dipeptide permease;
31-248 7.87e-05

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 45.32  E-value: 7.87e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839    31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLA 110
Cdd:PRK15462  14 VVALQIWEYFSFYGMRALLILYLTNQ-LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   111 fpLLAAPRSRSFLcgdphpelvrncsapfpngtavcpdaaarrcapatFAGLVLVGLGVATVKANITPFGADQVKdrgPE 190
Cdd:PRK15462  93 --LGASEIHPSFL-----------------------------------YLSLAIIVCGYGLFKSNVSCLLGELYE---PT 132
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   191 ATRR--FFNWFYWSINLGAILSLGGIAYIQQNVSFLTGYLIPTVCVAIAFLVFLCGQSVF 248
Cdd:PRK15462 133 DPRRdgGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
31-242 6.94e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 39.13  E-value: 6.94e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839   31 VLLAELLERAAFYGVTANLVLFLNGApFNWEGAQASQALLLFMGLTYLGSPFGGWLADaRLGRARAILLSLALYLLGMLA 110
Cdd:cd17329   4 LLIGSFLNRLGFFMVWPFMAIYLHQQ-LGLSASIVGLVLALSAVAGIVASLIGGRLAD-RFGRKPVMLAGLLLRALGFAL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208839  111 FPLLAAPrsrsflcgdphpelvrncsapfpngtavcpdaaarrcaPATFAGLVLVGLGVATVKANITPFGADQVKdrgPE 190
Cdd:cd17329  82 LGFAHSP--------------------------------------WLFAIALVLTGFGGGLFEPASEAMIADVTT---PE 120
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 2208839  191 ATRRFFNWFYWSINLGAILS--LGGIAYiqqNVSFLTGYLIPTVCVAIAFLVFL 242
Cdd:cd17329 121 NRTRAFSLLYWAINLGVAIGplLGGLLL---LYSFRLLFLAAAVLFLLAALVLL 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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