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Conserved domains on  [gi|116062205|dbj|BAA79012|]
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small heat shock protein [Aeropyrum pernix K1]

Protein Classification

Hsp20/alpha crystallin family protein( domain architecture ID 11414641)

Hsp20/alpha crystallin family protein is a small, stress-induced protein, between 12-43 kDa, which functions as an ATP-independent chaperone that prevents aggregation and protects against cell stress, induced by heat, osmotic, or acid shock

Gene Ontology:  GO:0009408|GO:0042802
SCOP:  4002439

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
IbpA COG0071
Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, ...
62-155 2.70e-10

Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 439841  Cd Length: 105  Bit Score: 54.00  E-value: 2.70e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205  62 VSVDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARIREHVVKRALGSLSEKFSFREYRGVYRLPAPVDPRSVRIRTR 141
Cdd:COG0071    2 VDIEETDDAYVITADLPGVDKEDIDVTVEGNVLTISGERKEEEEEEGENYLRRERRYGSFERSFTLPDDVDVDKIEASYE 81
                         90
                 ....*....|....
gi 116062205 142 GSLIIVEADKKAAV 155
Cdd:COG0071   82 NGVLTITLPKAEEA 95
 
Name Accession Description Interval E-value
IbpA COG0071
Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, ...
62-155 2.70e-10

Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 439841  Cd Length: 105  Bit Score: 54.00  E-value: 2.70e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205  62 VSVDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARIREHVVKRALGSLSEKFSFREYRGVYRLPAPVDPRSVRIRTR 141
Cdd:COG0071    2 VDIEETDDAYVITADLPGVDKEDIDVTVEGNVLTISGERKEEEEEEGENYLRRERRYGSFERSFTLPDDVDVDKIEASYE 81
                         90
                 ....*....|....
gi 116062205 142 GSLIIVEADKKAAV 155
Cdd:COG0071   82 NGVLTITLPKAEEA 95
ACD_sHsps-like cd06464
Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). ...
64-137 5.05e-09

Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.


Pssm-ID: 107221  Cd Length: 88  Bit Score: 50.25  E-value: 5.05e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 116062205  64 VDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARiREHVVKRALGSLSEKFSFREYRGVYRLPAPVDPRSVR 137
Cdd:cd06464    2 VYETDDAYVVEADLPGFKKEDIKVEVEDGVLTISGE-REEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIK 74
HSP20 pfam00011
Hsp20/alpha crystallin family; Not only do small heat-shock-proteins occur in eukaryotes and ...
69-155 7.63e-04

Hsp20/alpha crystallin family; Not only do small heat-shock-proteins occur in eukaryotes and prokaryotes but they have also now been shown to occur in cyanobacterial phages as well as their bacterial hosts.


Pssm-ID: 459629  Cd Length: 100  Bit Score: 36.82  E-value: 7.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205   69 DRLRILIDLPGMDRESLNIVVLEDRVEISArIREHVVKRALGSLSEkFSFREYRGVYRLPAPVDPRSVRIRTRGSLIIVE 148
Cdd:pfam00011   7 DAFEVRLDVPGFKPEELKVKVEDNRLLVKG-EHEEEKEDDHGLRSE-RSYGSFSRKFTLPENADPDKVKASLKDGVLTVT 84

                  ....*..
gi 116062205  149 ADKKAAV 155
Cdd:pfam00011  85 VPKLEPE 91
 
Name Accession Description Interval E-value
IbpA COG0071
Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, ...
62-155 2.70e-10

Small heat shock protein IbpA, HSP20 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 439841  Cd Length: 105  Bit Score: 54.00  E-value: 2.70e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205  62 VSVDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARIREHVVKRALGSLSEKFSFREYRGVYRLPAPVDPRSVRIRTR 141
Cdd:COG0071    2 VDIEETDDAYVITADLPGVDKEDIDVTVEGNVLTISGERKEEEEEEGENYLRRERRYGSFERSFTLPDDVDVDKIEASYE 81
                         90
                 ....*....|....
gi 116062205 142 GSLIIVEADKKAAV 155
Cdd:COG0071   82 NGVLTITLPKAEEA 95
ACD_sHsps-like cd06464
Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). ...
64-137 5.05e-09

Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.


Pssm-ID: 107221  Cd Length: 88  Bit Score: 50.25  E-value: 5.05e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 116062205  64 VDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARiREHVVKRALGSLSEKFSFREYRGVYRLPAPVDPRSVR 137
Cdd:cd06464    2 VYETDDAYVVEADLPGFKKEDIKVEVEDGVLTISGE-REEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIK 74
ACD_sHsps_p23-like cd00298
This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small ...
64-151 2.65e-07

This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR).


Pssm-ID: 107219  Cd Length: 80  Bit Score: 45.66  E-value: 2.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205  64 VDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISARIREHVVKRalgslsekFSFREYRGVYRLPAPVDPRSVRIRTRGS 143
Cdd:cd00298    1 WYQTDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREEEEERE--------RSYGEFERSFELPEDVDPEKSKASLENG 72

                 ....*...
gi 116062205 144 LIIVEADK 151
Cdd:cd00298   73 VLEITLPK 80
HSP20 pfam00011
Hsp20/alpha crystallin family; Not only do small heat-shock-proteins occur in eukaryotes and ...
69-155 7.63e-04

Hsp20/alpha crystallin family; Not only do small heat-shock-proteins occur in eukaryotes and prokaryotes but they have also now been shown to occur in cyanobacterial phages as well as their bacterial hosts.


Pssm-ID: 459629  Cd Length: 100  Bit Score: 36.82  E-value: 7.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205   69 DRLRILIDLPGMDRESLNIVVLEDRVEISArIREHVVKRALGSLSEkFSFREYRGVYRLPAPVDPRSVRIRTRGSLIIVE 148
Cdd:pfam00011   7 DAFEVRLDVPGFKPEELKVKVEDNRLLVKG-EHEEEKEDDHGLRSE-RSYGSFSRKFTLPENADPDKVKASLKDGVLTVT 84

                  ....*..
gi 116062205  149 ADKKAAV 155
Cdd:pfam00011  85 VPKLEPE 91
ACD_HspB4-5-6 cd06478
Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the ...
69-136 2.14e-03

Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activities. HspB5 is protective in demyelinating disease such as multiple sclerosis (MS), being a negative regulator of inflammation. In early active MS lesions it is the most abundant gene transcript and an autoantigen, the immune response against it would disrupt its function and worsen inflammation and demyelination. Given as therapy for ongoing demyelinating disease it may counteract this effect. It is an autoantigen in the pathogenesis of various other inflammatory disorders including Lens-associated uveitis (LAU), and Behcet's disease. Mutations in HspB5 have been associated with diseases including dominant cataract and desmin-related myopathy. Mutations in HspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). HspB6 (Hsp20) is ubiquitous and is involved in diverse functions including regulation of glucose transport and contraction of smooth muscle, in platelet aggregation, in cardioprotection, and in the prevention of apoptosis. It interacts with the universal scaffolding and adaptor protein 14-3-3, and also with the proapoptotic protein Bax.


Pssm-ID: 107233  Cd Length: 83  Bit Score: 35.12  E-value: 2.14e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 116062205  69 DRLRILIDLPGMDRESLNIVVLEDRVEISARIREHVVKRAlgslsekFSFREYRGVYRLPAPVDPRSV 136
Cdd:cd06478    7 DRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEERQDEHG-------FISREFHRRYRLPPGVDPAAI 67
ACD_alphaA-crystallin_HspB4 cd06497
Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, ...
69-136 4.42e-03

Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.


Pssm-ID: 107245  Cd Length: 86  Bit Score: 34.58  E-value: 4.42e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 116062205  69 DRLRILIDLPGMDRESLNIVVLEDRVEISARIREHvvKRALGSLSEKFSFReyrgvYRLPAPVDPRSV 136
Cdd:cd06497   10 DKFTIYLDVKHFSPEDLTVKVLDDYVEIHGKHSER--QDDHGYISREFHRR-----YRLPSNVDQSAI 70
metazoan_ACD cd06526
Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins ...
64-151 5.93e-03

Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.


Pssm-ID: 107247  Cd Length: 83  Bit Score: 34.03  E-value: 5.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116062205  64 VDDLGDRLRILIDLPGMDRESLNIVVLEDRVEISArirEHVVKRALGSlsekFSFREYRGVYRLPAPVDPRSV--RIRTR 141
Cdd:cd06526    2 VNDDDEKFQVTLDVKGFKPEELKVKVSDNKLVVEG---KHEEREDEHG----YVSREFTRRYQLPEGVDPDSVtsSLSSD 74
                         90
                 ....*....|
gi 116062205 142 GSLIIvEADK 151
Cdd:cd06526   75 GVLTI-EAPK 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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