|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-747 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1533.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 1 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVP 80
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSGMSVYAQAAVEPKEETITVTAAPAPQESAWGPAATIAAKRSATGTKTDTPIEKTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE 160
Cdd:PRK10044 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQNNYLDGLKLQGNFYNDAVIDPYMLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 161 RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
Cdd:PRK10044 161 RAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 241 SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
Cdd:PRK10044 241 SEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 321 HEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKGHYLARKYVVDDEKLQNFSVDTQLQSKFAT 400
Cdd:PRK10044 321 HEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKGHYLNRGYVVDDEKLQNFSVDTQLQSKFAT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 401 GDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLDLYNPVNTDFDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLV 480
Cdd:PRK10044 385 GDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGPVNTDFDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLV 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 481 TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKY 560
Cdd:PRK10044 461 TLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKY 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 561 VPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPA 640
Cdd:PRK10044 541 VPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPA 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 641 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE 720
Cdd:PRK10044 621 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDRE 700
|
730 740
....*....|....*....|....*..
gi 13359610 721 YVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:PRK10044 701 YVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
17-747 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 666.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 17 AVVVATAVSGMSVYAQAAVELkeDTITVTAAPAPQESawgpaatIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQP 96
Cdd:COG4773 12 AAAAGALAQAAAAAAAEATTL--PEVTVTGTAEGTGG-------YTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 97 KSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNGLKLQGnfYNDAVIDPYMLERAEIMRGPVSVLYGKS 176
Cdd:COG4773 83 TTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDGLPLGG--FGGGQPDTANLERVEVLKGPAGLLYGAG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 177 SPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRP 256
Cdd:COG4773 156 SPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 257 DDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFA 336
Cdd:COG4773 236 TDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 337 ENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRM 416
Cdd:COG4773 310 DSDRDGRSAYAYGAPDAATGTLT----------------RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRY 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 417 RNDINAWfgyddSVPLLDLYNPVNTDFDfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLN 495
Cdd:COG4773 374 DSDSDSA-----TAGTINIYNPVYGNLP-----EPDFDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTN 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 496 RVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYN 575
Cdd:COG4773 444 RLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFD 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 576 LTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKHMASLWADYT 654
Cdd:COG4773 524 ITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTYR 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 655 FFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASCFNTYGCFWG 734
Cdd:COG4773 604 FPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYYG 679
|
730
....*....|...
gi 13359610 735 AERQVVATATFRF 747
Cdd:COG4773 680 APRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
78-747 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 602.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 78 KVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 157
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQ 237
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 238 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEKMV 315
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 316 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 395
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 396 SKFATGDIDHTLLTGV-DFMRMRNDINAWFGYDDSVPLLDLYNPVNTDFDFNAKDPANSGPYRILNkqkqtGVYVQDQAQ 474
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALN-----GVALQRILL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 475 WDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGKDGNIFAPSK 550
Cdd:TIGR01783 374 ADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGNSGDILEPEK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 551 GKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:TIGR01783 454 GKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 631 DT--TYKGNTPAQVPKHMASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgMAGSN 708
Cdd:TIGR01783 533 DTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTK--KKNLT 609
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 13359610 709 VALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 747
Cdd:TIGR01783 610 LALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
82-747 |
4.71e-131 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 402.60 E-value: 4.71e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 82 SISVVTAEEMALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 157
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDALDDDGVYSYRLTGLARSA 234
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 235 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 308
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 309 SRNEKMVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 388
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 389 SVDTQLQSKFATGDIDHTLLTGVDFMRMRNDinawfgyddsvplldlynpvntdfdfnakdpansgpyrilnkQKQTGVY 468
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------EKQTALY 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 469 VQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNI- 545
Cdd:cd01347 339 AQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGs 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 546 -----------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEG-----SFFSVEGGEIRARGVEIEAKA 609
Cdd:cd01347 419 hggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNtglglVTVYVNGGKARIRGVELEASY 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 610 ALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPA---NSFKV 685
Cdd:cd01347 498 DLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTAngnNTVKV 574
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13359610 686 GSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 747
Cdd:cd01347 575 PGYTLVDLSASYQFTK----NLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
255-746 |
1.59e-51 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 186.90 E-value: 1.59e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 255 RPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRlptDFNEGAKNNTYSRNEKMVGYSFDHEFNDTF--TVRQN 332
Cdd:pfam00593 8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR---PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 333 LRFAENKTSQNSVYGYGvcsdpanayskqcaalapadkghYLARKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 412
Cdd:pfam00593 85 LRYSSLDGDYTSNSSGL-----------------------SGAGDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 413 FMRMRNDinaWFGYDDsvPLLDLYNPVNTDFDFNAKdpansgpyrilNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQ 491
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDPANPSSSSYSD-----------TTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYST 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 492 ESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGNI-FAPSKGKQYEV 556
Cdd:pfam00593 203 DGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNPdLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 557 GVKYvpEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:pfam00593 283 GLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDA 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 631 DTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYDLARvgmaGS 707
Cdd:pfam00593 361 DADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNK----NL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 13359610 708 NVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 746
Cdd:pfam00593 434 TLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-747 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1533.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 1 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVP 80
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSGMSVYAQAAVEPKEETITVTAAPAPQESAWGPAATIAAKRSATGTKTDTPIEKTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE 160
Cdd:PRK10044 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQNNYLDGLKLQGNFYNDAVIDPYMLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 161 RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
Cdd:PRK10044 161 RAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 241 SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
Cdd:PRK10044 241 SEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 321 HEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKGHYLARKYVVDDEKLQNFSVDTQLQSKFAT 400
Cdd:PRK10044 321 HEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKGHYLNRGYVVDDEKLQNFSVDTQLQSKFAT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 401 GDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLDLYNPVNTDFDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLV 480
Cdd:PRK10044 385 GDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGPVNTDFDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLV 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 481 TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKY 560
Cdd:PRK10044 461 TLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKY 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 561 VPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPA 640
Cdd:PRK10044 541 VPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPA 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 641 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE 720
Cdd:PRK10044 621 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDRE 700
|
730 740
....*....|....*....|....*..
gi 13359610 721 YVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:PRK10044 701 YVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
17-747 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 666.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 17 AVVVATAVSGMSVYAQAAVELkeDTITVTAAPAPQESawgpaatIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQP 96
Cdd:COG4773 12 AAAAGALAQAAAAAAAEATTL--PEVTVTGTAEGTGG-------YTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 97 KSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNGLKLQGnfYNDAVIDPYMLERAEIMRGPVSVLYGKS 176
Cdd:COG4773 83 TTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDGLPLGG--FGGGQPDTANLERVEVLKGPAGLLYGAG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 177 SPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRP 256
Cdd:COG4773 156 SPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 257 DDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFA 336
Cdd:COG4773 236 TDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 337 ENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRM 416
Cdd:COG4773 310 DSDRDGRSAYAYGAPDAATGTLT----------------RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRY 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 417 RNDINAWfgyddSVPLLDLYNPVNTDFDfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLN 495
Cdd:COG4773 374 DSDSDSA-----TAGTINIYNPVYGNLP-----EPDFDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTN 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 496 RVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYN 575
Cdd:COG4773 444 RLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFD 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 576 LTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKHMASLWADYT 654
Cdd:COG4773 524 ITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTYR 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 655 FFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASCFNTYGCFWG 734
Cdd:COG4773 604 FPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYYG 679
|
730
....*....|...
gi 13359610 735 AERQVVATATFRF 747
Cdd:COG4773 680 APRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
78-747 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 602.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 78 KVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 157
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQ 237
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 238 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEKMV 315
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 316 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 395
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 396 SKFATGDIDHTLLTGV-DFMRMRNDINAWFGYDDSVPLLDLYNPVNTDFDFNAKDPANSGPYRILNkqkqtGVYVQDQAQ 474
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALN-----GVALQRILL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 475 WDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGKDGNIFAPSK 550
Cdd:TIGR01783 374 ADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGNSGDILEPEK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 551 GKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:TIGR01783 454 GKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 631 DT--TYKGNTPAQVPKHMASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgMAGSN 708
Cdd:TIGR01783 533 DTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTK--KKNLT 609
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 13359610 709 VALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 747
Cdd:TIGR01783 610 LALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
71-747 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 598.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 71 KTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTrGASNTYDHLIIRGFAAegqSQNNYLNGLKLQGNFYn 150
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGA-GEGGNGDSFSIRGFSA---SGDIYVDGLRDPGQYR- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 151 davIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDgvYSYRLTGL 230
Cdd:COG4774 76 ---RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 231 ARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwLPKEGTVEPLPngkrLPTDFNEGAKNNTYSR 310
Cdd:COG4774 151 YRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYG-VPAVANGRPVD----VDRSTFYGQPDDYSDS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 311 NEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcsdpanayskqcaalapADKGHYLARKYVVDDEKLQNFSV 390
Cdd:COG4774 226 ETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTG------------------GNATGTVTRSAYRRDQDNDTLSN 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 391 DTQLQSKFATGDIDHTLLTGVDFMRMRNDiNAWFGYDDSVPLLDLYNPVNTDFDFNAkdpaNSGPYRILNKQKQTGVYVQ 470
Cdd:COG4774 288 QTDLTGKFDTGGVKHTLLAGVEYSREDSD-NARYSGGGTAPTVNLYNPVYGAPVTGP----TLGGADNDSRTDTTGLYLQ 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 471 DQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGK---DGNI 545
Cdd:COG4774 363 DTISLtDRWSLLAGLRYDRFDTDYTDRTTGaTTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSlsnAGQA 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 546 FAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTD 625
Cdd:COG4774 443 LDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLD 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 626 AEYT--TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvg 703
Cdd:COG4774 523 AEITksANAANVGNRLPNVPRHSASLWTTYDL---PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNK-- 597
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 13359610 704 maGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:COG4774 598 --NLTLRLNVNNLTDKRYYASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
17-746 |
9.41e-169 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 503.18 E-value: 9.41e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 17 AVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEM-ALHQ 95
Cdd:PRK14050 17 GVALAALVLSGLVAAQEGNTTQLETIVVEGGNAASATATGPVDGYVAKATATGSKTDTPITEIPQSVSVVGRQEMdDRGV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 96 PKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGK 175
Cdd:PRK14050 97 TNKVDEALRYTPGVLSQPFGTDGDTDWFYIRGFDA--TQTGVFLDGLNLFSYGFGGFQIDPFMLERVEVLKGPASVLYGG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 176 SSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWR 255
Cdd:PRK14050 175 SNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 256 PDDKTNFTFLSYFQNEPET-GYYGWLPKEGTVEPLPNGKrLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQNL 333
Cdd:PRK14050 255 PDDATSLTVYGYLSGLDQVhVGNGFLPYVGTVVDAPFGK-IDRDAFYGEPDiDNGSYAQQMLGYEFSHEFDNGWTFSQNA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 334 RFAENKTSQNSVYGYGVcSDPANAYSKqcaalaPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF 413
Cdd:PRK14050 334 RYGHLHKHEKGPYTYGY-VGGATGLPD------PTGPDYMLNRIGFEHRSKVDSFSIDNRLEGEFDTGALTHNLLFGLDY 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 414 MRMRND-INAWFGyddSVPLlDLYNPVntdfdFNAKDPANSgPY--RILNKQkQTGVYVQDQAQW-DKVLVTLGGRYDWA 489
Cdd:PRK14050 407 KYYRLDqVQACCG---ATPI-SATNPV-----YGTTQGANF-VYldQILTQQ-QIGIYAQDQIRFgDGWLVTLNGRYDYV 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 490 DQESLNRVaGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVV 569
Cdd:PRK14050 476 DTDSDARI-GTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEPSFIDGLI 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 570 TGAVYNLTKTNNLMADPeGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDT--TYKGNTPAQVPKHMA 647
Cdd:PRK14050 555 TASVFQITKKNVTVTDP-LTFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDAnpSLIGNSPYLVPETQA 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 648 SLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGmagsnVALHVNNLFDREYVASCFN 727
Cdd:PRK14050 634 SLWLDYAVTDGAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKNDWG-----ASLNVANLFDKEYVAGCQG 708
|
730
....*....|....*....
gi 13359610 728 TYGCFWGAERqvvaTATFR 746
Cdd:PRK14050 709 LLVCGYGESR----TITLK 723
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
63-747 |
5.72e-151 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 457.44 E-value: 5.72e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 63 ARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqsqnnYLNGL 142
Cdd:PRK14049 63 ATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAFFVRGFDV-------TYTGV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 143 kLQGNFYNDAVID------PYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDA 216
Cdd:PRK14049 136 -FRDNLRQPGASSsifktePYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 217 LDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQ--NEPETGYYGWLPKEGTVEPLPNGKr 294
Cdd:PRK14049 215 VNETDPVYYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVLGEYSrtKTGGTAAYYNDPLTGEVTDIFAGN- 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 295 lpTDFNEgaknntYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcSDPANayskqcAALAPADKGHYl 374
Cdd:PRK14049 294 --PAFND------SVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYA--PNAAD------PTLLDSSAGTY- 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 375 arkyvvdDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDdsvPLLDLYNPVN------TDFDFnak 448
Cdd:PRK14049 357 -------DERLTAFVIDNQLEAKFDTGAFEHTLLAGVDYTKLRFRALNGRGVS---PPLDTKNPTQgrpvaaIDFST--- 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 449 dpansgpyRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQES----LNRVAGTTDKRDDKQFTWRGGVNYLFDNGVT 524
Cdd:PRK14049 424 --------RTVQDQWQLGTYLQDQIRYDAWTLTAGGRYDWVSTDTdttdLATDSLTTVSQKDKEFSGRIGLTYETDFGLA 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 525 PYFSYSESFEPSSQVGKD-GNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL----MADPEG-SFFSVEGGEI 598
Cdd:PRK14049 496 PYISYSTAFSPNAGFNRAtNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLyyevVFLAAGpTNIQVQRGKL 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 599 RARGVEIEAKAALSASVNVVGSYTYTDA---EYTTDTTykGNTPAQVPKHMASLWADYTFF-DGPLSGLTLGTGGRYTGS 674
Cdd:PRK14049 576 RSRGFELEANTSLDNGLSLIASYTYTDVkiiQGPEGTI--GNEVSSVPNHMASAWAHYTLPeGGPLYGLGLGAGARFVGS 653
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13359610 675 SYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVN--NLFD-REYVASCFNtygCFWGAERQVVATATFRF 747
Cdd:PRK14049 654 SYGNDQNTFKNSSRVLFDASVGYDFAAIDKKYEGLMLQVNatNLFDrRKAVCTAGF---CYRDQGRTVIGSLRYNW 726
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
82-747 |
4.71e-131 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 402.60 E-value: 4.71e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 82 SISVVTAEEMALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 157
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDALDDDGVYSYRLTGLARSA 234
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 235 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 308
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 309 SRNEKMVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 388
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 389 SVDTQLQSKFATGDIDHTLLTGVDFMRMRNDinawfgyddsvplldlynpvntdfdfnakdpansgpyrilnkQKQTGVY 468
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------EKQTALY 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 469 VQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNI- 545
Cdd:cd01347 339 AQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGs 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 546 -----------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEG-----SFFSVEGGEIRARGVEIEAKA 609
Cdd:cd01347 419 hggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNtglglVTVYVNGGKARIRGVELEASY 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 610 ALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPA---NSFKV 685
Cdd:cd01347 498 DLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTAngnNTVKV 574
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13359610 686 GSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 747
Cdd:cd01347 575 PGYTLVDLSASYQFTK----NLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
68-730 |
1.86e-100 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 323.32 E-value: 1.86e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQGN 147
Cdd:COG1629 7 TATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGGGGNRVLVLVDGVPLNDP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 148 FYND---AVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDdgvYS 224
Cdd:COG1629 85 SGGDgglSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGGNGK---LA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 225 YRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTF-LSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGA 303
Cdd:COG1629 162 YRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLsASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDN 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 304 KNNTYSrnekmVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkghylarKYVVDDE 383
Cdd:COG1629 242 TRDRYS-----LSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGG----------------------TLEQTDF 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 384 KLQNFSVDTQLQSKFATGDiDHTLLTGVDFMRMRNDINAWFGYDDSvpllDLYNPVNTDFDFNakdpansgpyrilNKQK 463
Cdd:COG1629 294 DNRTYGLELRLTYDLGFGG-KHTLLVGLDYQRQDLDGSGYPLDLGS----GSLPTLTSGADDD-------------GTTT 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 464 QTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAGTTD---KRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS-- 537
Cdd:COG1629 356 SLALYAQDTYKLtDKLTLTAGLRYDYVSYDVDDTVTGTDSasgSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTfg 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 538 ---QVGKDGNIFA-----PSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGS-----FFSVEGGEIRARGVE 604
Cdd:COG1629 436 elyANGTDPYSVGnpdlkPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNdsgfsTYYTNAGKARSYGVE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 605 IEAKAALSASVNVVGSYTYTDAEYTTDTT----YKGNTPAQVPKHMASLWADYTFFDgplsGLTLGTGGRYTGSSYGDPA 680
Cdd:COG1629 516 LELSYQLTPGLSLNASYSYTDAKFDDDTDgsadLDGNRLPGVPPLTANLGLTYEFPG----GWSLGLGVRYVGDRYLDDA 591
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 13359610 681 NSFKV-GSYTVVDALVRYDLARVGmagsNVALHVNNLFDREYVASCFNTYG 730
Cdd:COG1629 592 NTQGApGGYTLVDLGAGYRFGDNL----TLSLGVDNLFDKKYATSLSVRAS 638
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
18-747 |
9.96e-71 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 244.45 E-value: 9.96e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 18 VVVATAVSGMSVYAQAAVELkeDTITVTAAPAPQESAwgpaatiaarqsatgtktdtpiQKVPQSISVVTAEEMALHQPK 97
Cdd:COG4772 4 ALAAALLLAAAAAAEAATTL--ETVVVTGSRAAEARL----------------------KDVPGSVSVVDREELENQAAT 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 98 SVKEALSYTPGVSVgtRGASNTYDHL-I-IRGFAAEGQSQNN-YLNGLKLQGNFYND--AVIDPYM--LERAEIMRGPVS 170
Cdd:COG4772 60 SLREVLRRVPGVNV--QEEDGFGLRPnIgIRGLGPRRSRGITlLEDGIPIAPAPYGDpaAYYFPDLerMERIEVLRGAAA 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 171 VLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYsyrLTGLARSANAQQKGSEEQRYAIAP 250
Cdd:COG4772 138 LRYGPQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGTVGNFGYL---VEYSRKRGDGFRDNSGFDINDFNA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 251 AFTWRPDDKTNFTF-LSYFQNEPETgyYGWLPkegtveplpngkrlPTDFNEG-----AKNNTYSRNEKMVGYSFDHEFN 324
Cdd:COG4772 215 KLGYRLSDRQELTLkFQYYDEDANT--PGGLT--------------DAQFDADprqsyRPADQFDTRRTQLSLRYEHQLS 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 325 DTFTVrqNLRFAENKTSQNSVYGYGVcSDPANayskqcaalaPADKGHYLARKYvvddeklQNFSVDTQLQSKFATGDID 404
Cdd:COG4772 279 DNTTL--TTTAYYNDFSRNWYIRQNT-ADPNT----------PGLGLRGNPRGY-------RSYGIEPRLTHRFELGGVP 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 405 HTLLTGVDFMRMRNDinaWFGYDDSVPLLDLYNPVNTDFDFNAKDpansgpyrilnkqkqTGVYVQDQAQW-DKVLVTLG 483
Cdd:COG4772 339 HTLEVGLRYHREEED---RKQYVNTYGQGRSGAGLRRDRRFSADA---------------LAAYAQNRFELtGRLTLTPG 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 484 GRYDWADQESLNRV-----AGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEP------SSQVGKDGNIfAPSKGK 552
Cdd:COG4772 401 LRYEHIRRDRTDRYstrtgGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPptfgdlAYGNGGNPDL-KPEKSW 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 553 QYEVGVKYVPEDRpivVTG-AVYNLTKTNNLM-----ADPEGSFFsVEGGEIRARGVEIEAKAALSA----SVNVVGSYT 622
Cdd:COG4772 480 NYELGTRGRIGNG---LSAeVALFYIDYDNELgscsaAGGDRSTF-TNAGETRHQGLELALDYDLLKggglGLPLFAAYT 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 623 YTDAEYTT--DTTYKGNTPAQVPKHMASLWADYTFfdgplSGLTLGTGGRYTGSSYGDPANSFKVG------SYTVVDAL 694
Cdd:COG4772 556 YTDAEFTSdfGPVFAGNRLPYVPRHQLTAGLGYEH-----GGWTANLNGRYVSEQFTDAANTVADGsfgkipSYTVLDLS 630
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 13359610 695 VRYDLARvgmaGSNVALHVNNLFDREYVAS--CFNTYGCFWGAERQVVATATFRF 747
Cdd:COG4772 631 ASYDFGK----NLSLFAGVNNLFDKRYIASraPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
18-699 |
4.36e-60 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 213.56 E-value: 4.36e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 18 VVVATAVSGMSVYAQAAVELKE-----DTITVTAapapqesawgpaatiaarqsatgTKTDTPIQKVPQSISVVTAEEMA 92
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEdatelEEVVVTA-----------------------TRTEQSLSDAPASVSVITAEEIE 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 93 LHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE-------GQSQNNYlnglkLQGNFYNDAVIDPYMLERAEIM 165
Cdd:COG4771 58 KLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDrvlvlidGVPVNNP-----ALGGGGDLSYIPPDDIERIEVI 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 166 RGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGT--DSLFQTGFDFSDALDDDGV---YSYRLTGLARSANAQQK- 239
Cdd:COG4771 133 RGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSngNGTYSGSLSLGGPGDKLSFllsGSYRDRDGYLDYRNGGFv 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 240 -GSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEpetgyygwlpkEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYs 318
Cdd:COG4771 213 gNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQ-----------DRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSLRY- 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 319 fDHEFNDTFtvrqNLRFAENKTSQNSVYGYGVCSDPANayskqcaalapadkghylarkyvvDDEKLQNFSVDTQLQSKF 398
Cdd:COG4771 281 -NGDLGDNL----DLSLYYSRTDRDSTNGSLGGSTGSF------------------------SDSDDTTYGLELDLTYPL 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 399 atgDIDHTLLTGVDFMRMRNDINAWFGYDDSvplldlynpvntdfdfnakdpansgpyrilnKQKQTGVYVQDQAQW-DK 477
Cdd:COG4771 332 ---GGNHTLTLGAEYRYDDLDSSSFLGGADA-------------------------------SRDTYGLFAQDEWKLtDK 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 478 VLVTLGGRYDWADqeslnrvagTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESF--------EPSSQVGKDGNIFA-- 547
Cdd:COG4771 378 LTLTAGLRYDYYS---------TFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFrapslaelYGSGTGTPGRYVLGnp 448
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 548 ---PSKGKQYEVGVKYVPEDRPIVVTGAVYNlTKTNNL-----MADPEGSFFSVE-GGEIRARGVEIEAKAALSASVNVV 618
Cdd:COG4771 449 dlkPETSDNYELGLEYRLGNGGLSLSLTGFY-TDIKDLivlvpVGPGPGDVLQYEnVGKARTYGLELELKYRLGKGLTLT 527
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 619 GSYTYTDAEYTTDTTykGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTgSSYGDPANSFKVGSYTVVDALVRYD 698
Cdd:COG4771 528 ASYTYLDSKIDDGDT--GEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRY-VTPPSGRLEGYTPGYTLLDLRASYK 604
|
.
gi 13359610 699 L 699
Cdd:COG4771 605 L 605
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
9-747 |
1.71e-54 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 200.80 E-value: 1.71e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 9 PKHSLRKIAVVVATAVSGMSVYAQAAVElkedtiTVTAAPAPQESAWGPAATIAARQSATGtKTDTPIQKVPQSISVVTA 88
Cdd:PRK09840 8 PARQFHSLAFFAGLCIGITPVAQALAAE------GQTNADDTLVVEASTPSLYAPDQSADP-KFSQPLADTTQTITVISE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 89 EEMALHQPKSVKEALSYTPGVS---VGTRGASNTYDHLIIRGFAAegqSQNNYLNGLKLQGNFYNDAvidpYMLERAEIM 165
Cdd:PRK09840 81 QVIKDQGATNLTEALRNVPGVGtffAGENGNTTTGDAIYMRGFDT---SNSIYVDGIRDIGSISRDT----FNTEQVEVI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 166 RGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGvySYRLTGLARSAN-AQQKGSEEQ 244
Cdd:PRK09840 154 KGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTT--AVRLNVMGEKTHdAGRDKVKNE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 245 RYAIAPAFTWRPDDKTNfTFLSYF---QNE------PETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMV 315
Cdd:PRK09840 232 RYGVAPSVAFGLGTANR-LYLNYLhvtQNNtpdggiPTIGLPGYSAPSAGRAALNHAGKVDTHNFYGTDSDYDDSTTDTA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 316 GYSFDHEFNDTFTVRQNLRFAenKTSQNsvygYGVCSDPANAYSKQcaALAPADKGHY-LARKYVVDDEKLQNFSVDTQL 394
Cdd:PRK09840 311 TMRFEHDINDNTTLRNTTRWS--RVKQD----YLLTAIMGGASNIT--TPTPSDVNTWtWSRTANTKDVSNKILTNQTNL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 395 QSKFATGDIDHTLLTGVDFMR--MRNdinawFGYDDS-VPLLDLYNPvntdfdfnakDPANSGPYRILN------KQKQT 465
Cdd:PRK09840 383 TSTFYTGSIGHDVSTGVEFTRetQTN-----YGVNPVtLPAVNLYHP----------DSSIHPGGLTRNganangQTDTF 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 466 GVYVQDQAQW-DKVLVTLGGRYDWADQE-----------------SLNRVAGTTDKRDDKQ-----FTWRGGVNYLFDNG 522
Cdd:PRK09840 448 AIYAFDTLQLtRDWELNGGIRLDNYHTEydsatacggsgrgaitcPAGVAKGSPVTTVDTAksgnlVNWKAGALYKLTEN 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 523 VTPYFSYSESFEP---------SSQVGKDGN--IFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFF 591
Cdd:PRK09840 528 GNVYINYAVSQQPpggsnfalaQSGSGNSANrtDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYS 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 592 svEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT--DTTYKG-NTPAQVPKHMASLWADYTFfdgpLSGLTLGTG 668
Cdd:PRK09840 608 --QYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNgkDVAQDGsSSLPYTPEHAFTLWSQYQA----TDDLSVGGG 681
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 669 GRYTGS-------SYGDPANsfkVGSYTVVDALVRYDLARvgmagsNVALHVN--NLFDREYVASCFNT-YGCFWGAERQ 738
Cdd:PRK09840 682 ARYIGSmhrgsdgAVGTPAF---TEGYWVADAKLGYRVNR------NLDLQLNvyNLFDTDYVASINKSgYRYHPGEPRT 752
|
....*....
gi 13359610 739 VVATATFRF 747
Cdd:PRK09840 753 FLLTANMHF 761
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
255-746 |
1.59e-51 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 186.90 E-value: 1.59e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 255 RPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRlptDFNEGAKNNTYSRNEKMVGYSFDHEFNDTF--TVRQN 332
Cdd:pfam00593 8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR---PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 333 LRFAENKTSQNSVYGYGvcsdpanayskqcaalapadkghYLARKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 412
Cdd:pfam00593 85 LRYSSLDGDYTSNSSGL-----------------------SGAGDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 413 FMRMRNDinaWFGYDDsvPLLDLYNPVNTDFDFNAKdpansgpyrilNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQ 491
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDPANPSSSSYSD-----------TTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYST 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 492 ESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGNI-FAPSKGKQYEV 556
Cdd:pfam00593 203 DGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNPdLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 557 GVKYvpEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:pfam00593 283 GLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDA 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 631 DTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYDLARvgmaGS 707
Cdd:pfam00593 361 DADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNK----NL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 13359610 708 NVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 746
Cdd:pfam00593 434 TLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
68-747 |
2.35e-33 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 136.75 E-value: 2.35e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDhLIIRGFA-------AEGQSQNnYLN 140
Cdd:TIGR01785 7 TATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQS-INIRGLQdnrvlvvVDGARQN-YQR 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 141 GLKLQGNFYndavIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPtTEPLKE-------VQFKAGT-DSLFQTGFD 212
Cdd:TIGR01785 85 GGAHNGSLF----VDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDA-ADLLRPgqlfgglAKLSYGSnNNSFGGSVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 213 FSDALDDD----GVYSYRLTGLARSANAQQKGSEE-QRYAIAPAFTWRPDDKTNFTFlSYFQNEpetgyyGWLpkegtve 287
Cdd:TIGR01785 160 VAGRLDDNldalVAATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEF-SYFTTE------GSL------- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 288 PLPNGKRLPTDFNEGAKNNTYSRNEKmvgysfdhefNDTFTVRQNLRFAENK--TSQNSVYGYGVCSDPANayskqcaal 365
Cdd:TIGR01785 226 DEAQNSGPGTEYVLGSSSTLLASSTR----------DRSATLTYNWTPEDNPwlDATASLYYNRTENDNDR--------- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 366 apadKGHYLARKYVVDDEklqNFSVDTQLQSKFAtGDIDHTLLTGVDFMRMRNDinawfgyddsvplldlynpvNTDFDF 445
Cdd:TIGR01785 287 ----SARGVGREEGYQYT---TYGATLQNTSRFD-VASWSTLTYGVDWMKDKRR--------------------TESFDP 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 446 NAKDPANSGPYRIlnKQKQTGVYVQDQAQW--DKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGV 523
Cdd:TIGR01785 339 NSVTTIVPNPPSA--KEYFFGLFLQDNIPLldDRLTLSAGLRYDHYKLSPKTTADTEAVDRSYSRWSPSLGLSYKPVDWL 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 524 TPYFSYSESFEPSS----------QVGKDGNIFAPS------KGKQYEVGVKYVPED----------------------- 564
Cdd:TIGR01785 417 TLYASYSQGFRAPSidelygtgdhPGTPGGYTFAPNpnlkpeTSKTWELGANLSFDNllldndqlqfkvayfyndvkdfi 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 565 -----RPIVVTGAVYNLTKTNNLmadpegsffsvegGEIRARGVEIEAKAALsASVNVVGSYTYTDAEYTTDTTYKGNtp 639
Cdd:TIGR01785 497 dltigVTDNVTAGMNNITQYVNI-------------DGARIRGIEASASYDA-GLWATGLSYGYTIGKDQNTNQWLSN-- 560
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 640 aqVPKHMASLWADYTFFDgplSGLTLGTGGRYTGSSY-------GDPANSFKVGSYTVVDALVRYDLARVgmAGSNVALH 712
Cdd:TIGR01785 561 --IPPLKLVVTVGYRFPD---RRLDLGAKAAYYERQSespttedVAANGLLTTPGYTVVDLYATYQPNAV--KGLTVRFG 633
|
730 740 750
....*....|....*....|....*....|....*
gi 13359610 713 VNNLFDREYVAScFNTYGCfwGAERQVVATATFRF 747
Cdd:TIGR01785 634 VNNLTDRKYTPA-QSVPGA--GPGRNFKGSVKYQF 665
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
3-747 |
3.87e-26 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 114.58 E-value: 3.87e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 3 RSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVElkeDTITVTA---APAPQESAwgpaaTIAARQSATGTKTDTPIQKV 79
Cdd:PRK10003 7 RDNQYQAIAKPSLLAGCIALALLPSAAFAAPATE---DTVIVEGsatAPVDDGEQ-----DYSVKTTSAGTKMQMTQRDI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 80 PQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQGNFyNDAVIDPYML 159
Cdd:PRK10003 79 PQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRA--LYYSRGFQIDNYMVDGIPTYFESRWNL-GDALSDTALF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 160 ERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLK-EVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTglarsANAQQ 238
Cdd:PRK10003 156 ERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKgDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIV-----AGYQN 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 239 KGSEEQRYAIAPAFTWR--PDDKTNFTFLS----YFQNEPETGYYGWLPKEGTveplpNGKRlpTDFNEG---AKNNTYS 309
Cdd:PRK10003 231 NDSWLDRYNSEKTFFSGivDADLGDLTTLSagyeYQRIDVNSPTWGGLPRWNT-----DGSS--NSYDRArstAPDWAYN 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 310 RNE-KMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYgygvcsdpANAY-SKQCAALAPADKGHYLARKYV----VDDE 383
Cdd:PRK10003 304 DKEiNKVFMTLKQRFADTWQATLNATHSEVEFDSKMMY--------VDAYvDKATGMLVGPYSNYGPGFDYVggtgWNSG 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 384 KLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRND-INAWfgyDDSVPlldlyNPVNTDFDFNAKDPANS-GPYRIL-- 459
Cdd:PRK10003 376 KRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRyFSSW---ANIFP-----DEIGSFYNFNGNFPQTDwSPQSLAqd 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 460 NKQKQTGVYVQDQAQW-DKVLVTLGGRY-DWadqeslnRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS 537
Cdd:PRK10003 448 DTTHMKSLYAATRVSLaDPLHLILGARYtNW-------RVDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQN 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 538 QVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNnlMADPEGSFFSVEGGE--------IRARGVEIEAKA 609
Cdd:PRK10003 521 DRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDN--VAQSTGTPIPGSNGEtaykavdgTVSKGVEFELNG 598
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 610 ALSASVNVvgsyTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPlsGLTLGTGGRYTGSSYGD---PANSFKV- 685
Cdd:PRK10003 599 AITDNWQL----TFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLPVMP--ELTVGGGVNWQNRVYTDtvtPYGTFRAe 672
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13359610 686 -GSYTVVDALVRYDLARvgmagsNVAL--HVNNLFDREYvASCFNTYGCFwGAERQVVATATFRF 747
Cdd:PRK10003 673 qGSYALVDLFTRYQVTK------NFSVqgNVNNLFDKTY-DTNVEGSIVY-GAPRNFSITATYQF 729
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
17-720 |
1.71e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 106.01 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 17 AVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQEsawgpaatiaarqsatgtktdtpIQKVPQSISVVTAEEMALHQP 96
Cdd:PRK13483 11 ALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQ-----------------------IRDAPASISVITREDLENRFY 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 97 KSVKEALSYTPGVSVgtRGASNTYDhLIIRGFAA-------EGQSQNNYLNGLKLQGNFYNDAVIDPY-MLERAEIMRGP 168
Cdd:PRK13483 68 RDLTDALLDVPGVVV--TGGGDRTD-ISLRGMGSqytlilvDGKRQSSRETRPNSDGPGVEQAWTPPLaAIERIEVIRGP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 169 VSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKA----GTDS--LFQTGFDFSDALDDDgvysyrLTGLARSANAQQKGSE 242
Cdd:PRK13483 145 MSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTtlqeNSDSgnVYQANFFVNGPLIKD------LLGLQLYGQYTQREED 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 243 EQRY--------AIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwlpkeGTVEPLPNGKRLPTDFNEGAKNNTYSRNEkm 314
Cdd:PRK13483 219 DIEGgyrdkdarSLTAKLALTPNEDHDIMLEVGTSNQERDSTVG-----KTVAPLAPGESCGRRGCPESSTTEYERST-- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 315 vgYSFDHefndtftvrqnlrfaenktsqNSVYGYGVcsdpANAYSKQcaalapaDKGHYLARKYVVDdeklqnfsvDTQL 394
Cdd:PRK13483 292 --VSLSH---------------------TGRWDFGT----SDTYIQH-------EEFDNKSREMKIK---------NTDF 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 395 QSKFATG-DIDHTLLTGVDFMRMrndinawfgyddsvpllDLynpvnTDFDFNAKdpanSGPYRILNkqKQTGVYVQDqa 473
Cdd:PRK13483 329 QSSLVAPlGQEHTLTFGAAYNHQ-----------------DL-----TDETSNQI----SDLTDISR--TQWAVFSED-- 378
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 474 QW---DKVLVTLGGRYDwaDQESLN-----RVAGTTDKRDdkQFTWRGGVNYLFDngvTPyfSYSESFEPSSQVGKDGNI 545
Cdd:PRK13483 379 EWriaDDFALTGGLRLD--HDENFGghvspRVYGVWNLAP--SWTVKGGVSTGFR---AP--SLRQTTPDWGQVSRGGNI 449
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 546 F-----APSKGKQYEVGVKYVPEDRPIVVTGAVYN-----LTKT-----------NNLMADPEgsfFSVEGGEIRARGVE 604
Cdd:PRK13483 450 YgnpdlKPETSLNKELGLYYDLGSGLTASLTVFYNefkdkITRVacpatqctdgpNQFGADPT---TYVNIDEAVTQGVE 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 605 IEAKAALSASVNVVGSYTYTDAEYTTDtTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFK 684
Cdd:PRK13483 527 ASLSYPITSTLSLSGNYTYTDSEQKSG-AYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPTTGPSSSSFI 605
|
730 740 750
....*....|....*....|....*....|....*...
gi 13359610 685 VGSYTVVDALVRYDLARvgmagsNVALH--VNNLFDRE 720
Cdd:PRK13483 606 APSYTFLDLGANYQLTD------NLKLSagIYNLFDKE 637
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
68-331 |
1.71e-23 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 101.10 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFaaeGQSQNNYL-NGLKL-- 144
Cdd:COG4206 4 TATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGL---GSNQTLVLiDGVPLnd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 145 -QGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVY 223
Cdd:COG4206 81 pSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAGKFSYS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 224 ---SYRLTGLARSANAQQKGSEEQRYAIAPA-FTWRPDDKTNFTFlSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDF 299
Cdd:COG4206 161 lsaSYRRSDGYRYNDPDLRNNDGYENTSLNArLGYKLGDNGSLSL-SGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDG 239
|
250 260 270
....*....|....*....|....*....|..
gi 13359610 300 NEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQ 331
Cdd:COG4206 240 WSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
75-180 |
2.28e-22 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 92.33 E-value: 2.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 75 PIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFAaeGQSQNNYLNGLKLQGNFYND--- 151
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGG-GGGGSSISIRGFG--SNRVLVLVDGVPLNSGGGGSvdl 77
|
90 100
....*....|....*....|....*....
gi 13359610 152 AVIDPYMLERAEIMRGPVSVLYGKSSPGG 180
Cdd:pfam07715 78 NSIDPEDIERVEVLKGPASALYGSGAIGG 106
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
58-721 |
4.80e-18 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 88.38 E-value: 4.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 58 AATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGfaAEGQSQNN 137
Cdd:TIGR01779 24 EAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSLFLRG--TESDHVLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 138 YLNGLKLQ-----GNFYNDAVIDpyMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSlFQTGfd 212
Cdd:TIGR01779 102 LIDGIRFGsaaagAADFQQLPVE--LVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLD-YQEY-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 213 fsdaldddgvysyrltglarSANAQQKGSEEQRYAIApaftwrpddktnftfLSYFQNEpetGYYGWLPKEGTVEPLPNG 292
Cdd:TIGR01779 177 --------------------SIASGVAIGENGWYSVA---------------LGTESTK---GINVRPGGPGVYDPDRDG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 293 KRLPTDFNEGAK--NNTYSRNEKMVGYSFDHEFnDTFTVRQNLRFAENKTSQNSVYGYgVCSDPANAYSKQCAALAPADK 370
Cdd:TIGR01779 219 FRSDSLLLGGGHrfDESWSLFVNALRYENRNDY-DNYSFGTRLYKEAEKGDQSFTGGR-QRQSERDVSELTLSTGKSKDW 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 371 G--HYLARKYVVDDEKLQNfsvDTQLQSKFATGDIdHTLLTGVDFMRmrndinawfgyddsvpllDLYNPVNTDFDFNak 448
Cdd:TIGR01779 297 DyaYSKGRYSSTSDTREQR---NIQWQNDLLVGDG-WVLAGGVDWQK------------------DSIISSTADKEDD-- 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 449 dpansgpyrilnkQKQTGVYVQDQAQWdkvlvtlgGRYDWadQESLNRvagttdkRDDKQF----TWRGGVNYLFDNGVT 524
Cdd:TIGR01779 353 -------------RSNTAAFAQVLQQW--------GQQLL--EASLRR-------DDNQQFgshtTGSIAWGYQFIEELR 402
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 525 PYFSYSESFEPSS---QVGKD-GNI-FAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLtktNNLMA-DPEGSFFSVEGGEI 598
Cdd:TIGR01779 403 FTASYGTAFKAPNlnqLYYPSyGNPnLQPETSKSAELGFYGLFSGGKWSISGYRTKI---NDLIDyDSHPKGYPNNIGEA 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 599 RARGVEIEAKAALsASVNVVGSYTYTDAEYTTDttykGNTPAQVPKHMASLWADYTFFDgplsgLTLGTGGRYTGSSYGD 678
Cdd:TIGR01779 480 RIKGVEATAEFAT-GGWTHQLSVDLLDAQNVNT----GNTLPRRARQMYKWNADRAFEQ-----FDWGASYQYVGKRYDD 549
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 13359610 679 PANSF-----KVGSYTVVDALVRYDLArvgmAGSNVALHVNNLFDREY 721
Cdd:TIGR01779 550 DYNTYptqnvRLGGYSLLDLRVSYYVT----DSWTVQGRIANLFDKDY 593
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
14-264 |
3.62e-17 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 85.98 E-value: 3.62e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 14 RKIAVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQESawgpaatiaarqsatgtktdtpIQKVPQSISVVTAEEMAL 93
Cdd:PRK13513 9 HKAALVIAAAISSQAYAAEKTNTATPTDTMVVTASGFQQR----------------------IQDAPASISVVTREQLEN 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 94 HQPKSVKEALSYTPGVSVgTRGASNTydHLIIRGFAAE--------------GQSQNNYLNGLKlQGNFYNDAVIdpyml 159
Cdd:PRK13513 67 KAYRDVTDALKDVPGVVV-TGGGSTS--DISIRGMAAKytlilvdgkrvdtrSTRPNSDGSGIE-QGWLPPLAAI----- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 160 ERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQ----FKAGTDS--LFQTGFDFSDALdDDGVYSYRLTGL--A 231
Cdd:PRK13513 138 ERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWHGSLRadatLQEDSKSgdIFQTNAYASGPL-IDGLLGLKVSGLlsH 216
|
250 260 270
....*....|....*....|....*....|....
gi 13359610 232 RSANAQQKGSEEQRYAIAPA-FTWRPDDKTNFTF 264
Cdd:PRK13513 217 RSEDKIIDGYNEQRMRNGTAtFSLTPDDNNEFDF 250
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
16-220 |
1.93e-09 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 61.18 E-value: 1.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 16 IAVVVATAVSGMSVYAQAAVELKEDTITVTAAPAPQESAWGPAatiaarqsatgtktdtpiqkvpqSISVVTAEEMALHQ 95
Cdd:PRK13484 7 IAPGIAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPA-----------------------SVSVITSEQLQKKP 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 96 PKSVKEALSYTPGVSVgtRGASNTYDhLIIRGFAAE-------GQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGP 168
Cdd:PRK13484 64 VSDLVDAVKDVEGISI--TGGNEKPD-ISIRGLSGDytlilvdGRRQSGRESRPNGSGGFEAGFIPPVEAIERIEVIRGP 140
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 13359610 169 VSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTdslFQTGFDFSDALDDD 220
Cdd:PRK13484 141 MSSLYGSDAIGGVINIITKPVNNQTWDGVLGLGGI---IQEHGKFGNSTTND 189
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
18-264 |
1.03e-08 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 58.74 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 18 VVVATAVSGMSV-YAQAAVELKEDTITVTAAPAPQESAWGPAatiaarqsatgtktdtpiqkvpqSISVVTAEEMALHQP 96
Cdd:PRK10064 8 VRVGLCASAISCaWPVLAVDDDGETMVVTASAVEQNLKDAPA-----------------------SISVITQEDLQRKPV 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 97 KSVKEALSYTPGVS----------VGTRGASNTYDHLIIRGfaaegqSQNNYLNGLkLQGNFYNDAVIDPYMLERAEIMR 166
Cdd:PRK10064 65 QNLKDVLKEVPGVQltnegdnrkgVSIRGLDSSYTLILIDG------KRVNSRNAV-FRHNDFDLNWIPVDAIERIEVVR 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 167 GPVSVLYGKSSPGGLLNMVSKrptteplKEVQFKAGT---DSLFQTGFDFSDALDD---------DGVYSYRLTG-LARS 233
Cdd:PRK10064 138 GPMSSLYGSDALGGVVNIITK-------KIGQKWHGTvtvDTTIQEHRDRGDTYNGqfftsgpliDGVLGMKAYGsLAKR 210
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 13359610 234 ANAQQKGSEEQRYAIAPA------------FTWRPDDKTNFTF 264
Cdd:PRK10064 211 EKDDPQNSTTTDTGETPRiegftsrdgnveFAWTPNQNHDFTA 253
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
13-229 |
1.52e-08 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 58.12 E-value: 1.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 13 LRKIAVVVATAVSGMSVYAQAAVE-------LKEDTITVTAApapQEsawgpaatiaARQsATGTktdtpiqkvpqsiSV 85
Cdd:PRK13524 5 IHSLALLVNLGIYGVAQAAEAEDAktddtpaSHEDTIVVTAA---EQ----------NLQ-APGV-------------ST 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 86 VTAEEMALHQP-KSVKEALSYTPGVSV------GTRGASNTYDhliIRGFAAEG----------QSQNNYLNGLKLQGNF 148
Cdd:PRK13524 58 ITAEDIRKRPPaNDVSEIIRTMPGVNLtgnstsGQRGNNRQID---IRGMGPENtlilidgkpvSSRNSVRYGWRGERDT 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 149 YND-AVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEplkevqfKAGTDSLF-------------QTGFDFS 214
Cdd:PRK13524 135 RGDtNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTGE-------WHGSWNTYfnapehkaegatkRTNFSLS 207
|
250
....*....|....*
gi 13359610 215 DALDDDgvYSYRLTG 229
Cdd:PRK13524 208 GPLGDE--LSFRLYG 220
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
68-721 |
3.15e-08 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 56.95 E-value: 3.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSV--GT----------RGASNTYDHLIIRGfAAEGQSQ 135
Cdd:PRK13486 31 SASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVesGTgktggleisiRGMPASYTLILIDG-VRQGGSS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 136 NNYLNGLKLQgnfyNDAVIDPY-MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTE---------PLKEVQfKAGTDS 205
Cdd:PRK13486 110 DVTPNGFSAM----NTGFMPPLaAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKwlssvnaglNLQESN-KWGNSS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 206 LFQtgFDFSDALDDDGvysyrLTGLARSANAQQKGS-----------------EEQRYAIAPAFTWRPDDKTNFTFlsyf 268
Cdd:PRK13486 185 QFN--FWSSGPLVDDS-----VSLQVRGSTQQRQGSsvtslsdtaatripyptESQNYNLGARLDWKASEQDVLWF---- 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 269 qnEPETGYYGWLPKEGTVEPLPNGKRlptdfnegaKNNTYSRNEKMVGYsfDHEFN-DTFTVRQNLRFAENKTSQNSvyg 347
Cdd:PRK13486 254 --DMDTTRQRYDNRDGQLGSLTGGYD---------RTLRYERNKISAGY--DHTFTfGTWKSYLNWNETENKGRELV--- 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 348 ygvcsdpANAYSKQCAALAPADKghylarkyvvdDEKLQNFSVDTQLQSKFATgdiDHTLLTGVDFMRMRndinawfgYD 427
Cdd:PRK13486 318 -------RSVLKRDKWGLAGQPR-----------ELKESNLILNSLLLTPLGE---SHLVTVGGEFQSSS--------MK 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 428 DSVPLldlynpvntdfdfnakdpANSGPYRilnKQKQTGVYVQDqaQW---DKVLVTLGGRYDWADQeslnrVAGTTDKR 504
Cdd:PRK13486 369 DGVVL------------------ASTGETF---RQKSWSVFAED--EWhltDALALTAGSRYEHHEQ-----FGGHFSPR 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 505 ddKQFTWRGGVNYLFDNGVTPYF---SYSESFEPSSQVGKDGNI-------FAPSKGKQYEVGVKYvpeDRpivVTGAVY 574
Cdd:PRK13486 421 --AYLVWDVADAWTLKGGVTTGYkapRMGQLHKGISGVSGQGKTnllgnpdLKPEESVSYEAGVYY---DN---PAGLNA 492
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 575 NLTK-----TNNLMA----DPEGSFfsVEGGEIRARGVEIEAKAAL-SASVNVVGSYTYTDAEyTTDTTYKGNTPAQVPK 644
Cdd:PRK13486 493 NVTGfmtdfSNKIVSysinDNTNSY--VNSGKARLHGVEFAGTLPLwSEDVTLSLNYTWTRSE-QRDGDNKGAPLSYTPE 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 645 HMASLWADYTFFDGPLSGLtlgtGGRYTGSS-----------------YGDPANSFKvgSYTVVDALVRYDLARVGMAgs 707
Cdd:PRK13486 570 HMVNAKLNWQITEEVASWL----GARYRGKTprftqnysslsavqkkvYDEKGEYLK--AWTVVDAGLSWKMTDALTL-- 641
|
730
....*....|....
gi 13359610 708 NVAlhVNNLFDREY 721
Cdd:PRK13486 642 NAA--VNNLLNKDY 653
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
14-721 |
2.39e-06 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 50.76 E-value: 2.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 14 RKIAVVVATAVSGMSVYAQAAvelKEDTITVTAAPAPQesawgpaatiaarqsatgtktdtPIQKVPQSISVVTAEEMAL 93
Cdd:PRK10641 3 KKASLLTALSVTAFSGWAQDT---SPDTLVVTANRFQQ-----------------------PVSTVLAPTTVVTRDDIDR 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 94 HQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqSQNNYL-NGLKL-QGNFYNDAVIDPY---MLERAEIMRGP 168
Cdd:PRK10641 57 WQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNS---SHVLVLiDGVRLnQAGISGSADLSQIpisLVQRIEYIRGP 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 169 VSVLYGKSSPGGLLNMVSKRPTteplKEVQFKAGTDSlfqtgfdfsdalddDGVYSYrltglarsanaqqKGSEEQRYAi 248
Cdd:PRK10641 134 RSAVYGSDAIGGVVNIITTRDK----PGTTLSAGWGS--------------NGYQNY-------------DGSTQQQLG- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 249 apaftwrpdDKTNFTFLSYFQNepeTGYYGWLPKEGTVEPlPNGKRlptdfnEGAKNntysrneKMVGYSFDHEFNDTFT 328
Cdd:PRK10641 182 ---------DNTRVTLAGDYTY---TKGFDVVAYGNTGTQ-AQPDR------DGFMS-------KTLWGGLEHQFNDQWS 235
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 329 --VRqnlrfaenktsqnsVYGYgvcsDPANAYSkqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLqsKFATGDIDHT 406
Cdd:PRK10641 236 gfVR--------------GYGY----DNRTDYD-----------AYYSPGSPLIDTRQLYSQSWDAGL--RYNGGIYSSQ 284
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 407 LLTGVDFMRMRNDINAWFGYDDSVPLLDL--YN------------PVNTDFDFNAKDPANSGPYRILN-KQKQTGVYVQD 471
Cdd:PRK10641 285 LIASYSHSKDYNYDPHYGRYDSSATLDDMkqYNvqwgntvqvghgNISAGVDWQKQTTTPGTGYVPDGyDQRNTGIYLTG 364
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 472 QAQWDKVLVTLGGRYDwadqeslnrvagttdkrDDKQF----TWRGGVNYLFDNGVTPYFSYSESFE-PS--SQVGKDGN 544
Cdd:PRK10641 365 QQQIGDVTLEGAARSD-----------------DNSQFgwhgTWQTSAGWEFIDGYRFIASYGTAFKaPNlgQLYGFYGN 427
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 545 I-FAPSKGKQYEVGVKYvpedrpivVTGAV-YNLT----KTNNLMA--DPEGSFFSVegGEIRARGVEIEAK---AALSA 613
Cdd:PRK10641 428 PnLKPEESKQWEGGFEG--------LTGPVnWRLSgyrnDIDNLIDydDHTLKYYNV--GKATIKGVEWTGNfdtGPLTH 497
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 614 SVnvvgSYTYTDAEytTDTTykgNTP-AQVPKHMASLWADYTFFDgplsgLTLGTGGRYTGSSY-----GDPANSFKVGS 687
Cdd:PRK10641 498 QV----TLDYVDPR--NAIT---DEPlARRAKQQVKYQLDWQLYD-----FDWGVTYQYLGTRYdkdysTYPYQTVKLGG 563
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 13359610 688 YTVVDALVRYDlarvgmagsnVALH------VNNLFDREY 721
Cdd:PRK10641 564 VSLWDLAVSYP----------VTSHltvrgkIANLFDKDY 593
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
56-190 |
2.44e-06 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 50.91 E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 56 GPAATIAARQSATGTKTDTPI------QKVPQS--ISVVTAEEMALHQP-KSVKEALSYTPGV------SVGTRGASNTY 120
Cdd:PRK13528 18 GLNSPVSAAESSDDDNGETMVveataeQELKQQpgVSIITAEDIKKRPPvNDLSDIIRKMPGVnltgnsASGTRGNNRQI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13359610 121 DhliIRGFAAEG----------QSQNNYLNGLKLQGNFYNDA-VIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRP 189
Cdd:PRK13528 98 D---IRGMGPENtlilidgvpvTSRNSVRYSWRGERDTRGDTnWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRP 174
|
.
gi 13359610 190 T 190
Cdd:PRK13528 175 T 175
|
|
| |
