|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
1-477 |
0e+00 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 965.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL 80
Cdd:PRK11089 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 81 AAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA 160
Cdd:PRK11089 81 AAVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLGGIIAGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 161 AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY 240
Cdd:PRK11089 161 AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 241 MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAG 320
Cdd:PRK11089 241 MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 321 LAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSE 400
Cdd:PRK11089 321 LAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDETEDAKATGTSE 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 13360943 401 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH 477
Cdd:PRK11089 401 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH 477
|
|
| PTS-II-BC-glcB |
TIGR02002 |
PTS system, glucose-specific IIBC component; This model represents the combined B and C ... |
2-476 |
0e+00 |
|
PTS system, glucose-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273923 [Multi-domain] Cd Length: 502 Bit Score: 745.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 2 FKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSAN-----FSWLP-------AVVSHVMAEAGGSVFANMPLIFAIGVAL 69
Cdd:TIGR02002 1 FKKAFGQLQKIGKALMLPVAVLPVAGILLGFGNANqnnqvFSFLPflhmewiQLVSKVMEAAGGIIFANLPLIFAIGVAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 70 GFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAS------KHLADTGVLGGIISGAIAAYMFNRFYRIKLPEY 143
Cdd:TIGR02002 81 GLAGNDGVAGLAALVGYLIMNKTMGVVAGLTLLLIASEIASfasvlgIPTLQTGVFGGIIIGAIAAYCYNRFYNIKLPEY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 144 LGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIG 223
Cdd:TIGR02002 161 LGFFAGKRFVPIITGLAAIVTGIVLSFIWPPVQDALNTFSHWAAYQNPVVAFFIFGFIERSLIPFGLHHIFNAPFWFEFG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 224 EYTNAAGQVFHGDIPRYMAG--DPTA----GKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297
Cdd:TIGR02002 241 SYTNEAGNLFRGDQPIFMAQlkDGVAftagGFLSGGFPFMMFGLPAAALAIYHSAKPENKKLVGGLMISAALTSFLTGIT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 298 EPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIV--LSGNSSKLWLFPIVGIGYAIVYYTIFRVL 375
Cdd:TIGR02002 321 EPLEFSFLFVAPILYVIHAILAGLSFPIMILLGVKIGTTFSGGAIDFILygLLSNRSKAWLFIIVGIGYAIIYYFLFRFL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 376 IKALDLKTPGREDATEDAKATGT-SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG 454
Cdd:TIGR02002 401 IKKLNLKTPGREDATAEAKATGEpSELAFDVVAALGGKENITSLDACITRLRVSVADISKVDVAKLKKLGAAGVLVVGNN 480
|
490 500
....*....|....*....|..
gi 13360943 455 VQAIFGTKSDNLKTEMDEYIRN 476
Cdd:TIGR02002 481 VQAIFGPKSDTIKSEMHDIIRG 502
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-474 |
3.91e-100 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 308.02 E-value: 3.91e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSA--NFSWLPAV-----VSHVMAEAGGSVFANMPLIFAIGVALGFTn 73
Cdd:COG1263 4 KKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALltNPGLLGEGsflsgTYQILNAAGDAVFYFLPLLFAIGAAKGFG- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 74 ndGVSALAAVVAYGIMVKTMAVVAPL-VLHLPAEEIASKHLADTGVLGGIISGAIAAYMfNRFYRIKLPEYLGFFagkrF 152
Cdd:COG1263 83 --GNPALAAVIGYLLVHPTLLNAYAVaGGYISFLGIPTLIGYQGGVFPGILAGWLAAYL-EKFLKKKLPDALGFF----F 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 153 VPIISGLAAIFTGV-VLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEytnaagq 231
Cdd:COG1263 156 VPILTLLIMVPLALlVIGPIWPPIGNGIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHGLNPIFWFLLGG------- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 232 vfHGDIPRYMAgdptagklsggFLFKMYGLPAAAIAIWHSAKPenRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPIL 311
Cdd:COG1263 229 --TGDDGLFPI-----------LAAAMFGQPGAALAVYLKAKP--NKKVKGLAISAALTAFLTGITEPAEFGFNLVAPKL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 312 YIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKaldlKTPGREDATE 391
Cdd:COG1263 294 FIAHAIGGGLGGAIAGLLGVKAFSFGVGGLIDFPSILNPGATNLLLYLIGLVIAFVYYFVFTFLIG----REDEEEEEKL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 392 DAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMD 471
Cdd:COG1263 370 ATKADAKKEEAEAAAAALGGGGGLLLLEADITVLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVI 449
|
...
gi 13360943 472 EYI 474
Cdd:COG1263 450 VII 452
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
13-320 |
4.93e-70 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 225.30 E-value: 4.93e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 13 GKSLMLPVSVLPIAGILLGVGSANFS---------WLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAV 83
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDttglpaggfTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGDGVAGAAGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 84 VAYGIMVKTMAVVAPLVLHLPAE--EIASKHLADTGVLGGIISGAIAAYMFNRFY---RIKLPEYLGFFAGKRFVPIISG 158
Cdd:pfam02378 81 IGLLSFNLAAAISVALTAAGLSGggNILGIGLGATGVFGAIIPGLLAAYLYNRFEkniTIKLPDSLPFFVGKRFVPIITG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 159 L-AAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNA-AGQVFHGd 236
Cdd:pfam02378 161 FvTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPIGGSNPiANQQAYG- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 237 iprymagdPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHA 316
Cdd:pfam02378 240 --------AGAAHILTGGFDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFLFGITEPLEFGFPFVLNPPFFIPA 311
|
....
gi 13360943 317 ILAG 320
Cdd:pfam02378 312 ILAG 315
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
399-474 |
2.48e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 104.15 E-value: 2.48e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 13360943 399 SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFGT-KSDNLKTEMDEYI 474
Cdd:cd00212 1 EQLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLgGVKGVVKNGGQYQVIIGPgVADVYKEAIKLLG 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
1-477 |
0e+00 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 965.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL 80
Cdd:PRK11089 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 81 AAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA 160
Cdd:PRK11089 81 AAVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLGGIIAGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 161 AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY 240
Cdd:PRK11089 161 AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 241 MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAG 320
Cdd:PRK11089 241 MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 321 LAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSE 400
Cdd:PRK11089 321 LAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDETEDAKATGTSE 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 13360943 401 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH 477
Cdd:PRK11089 401 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH 477
|
|
| PTS-II-BC-glcB |
TIGR02002 |
PTS system, glucose-specific IIBC component; This model represents the combined B and C ... |
2-476 |
0e+00 |
|
PTS system, glucose-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273923 [Multi-domain] Cd Length: 502 Bit Score: 745.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 2 FKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSAN-----FSWLP-------AVVSHVMAEAGGSVFANMPLIFAIGVAL 69
Cdd:TIGR02002 1 FKKAFGQLQKIGKALMLPVAVLPVAGILLGFGNANqnnqvFSFLPflhmewiQLVSKVMEAAGGIIFANLPLIFAIGVAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 70 GFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAS------KHLADTGVLGGIISGAIAAYMFNRFYRIKLPEY 143
Cdd:TIGR02002 81 GLAGNDGVAGLAALVGYLIMNKTMGVVAGLTLLLIASEIASfasvlgIPTLQTGVFGGIIIGAIAAYCYNRFYNIKLPEY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 144 LGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIG 223
Cdd:TIGR02002 161 LGFFAGKRFVPIITGLAAIVTGIVLSFIWPPVQDALNTFSHWAAYQNPVVAFFIFGFIERSLIPFGLHHIFNAPFWFEFG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 224 EYTNAAGQVFHGDIPRYMAG--DPTA----GKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297
Cdd:TIGR02002 241 SYTNEAGNLFRGDQPIFMAQlkDGVAftagGFLSGGFPFMMFGLPAAALAIYHSAKPENKKLVGGLMISAALTSFLTGIT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 298 EPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIV--LSGNSSKLWLFPIVGIGYAIVYYTIFRVL 375
Cdd:TIGR02002 321 EPLEFSFLFVAPILYVIHAILAGLSFPIMILLGVKIGTTFSGGAIDFILygLLSNRSKAWLFIIVGIGYAIIYYFLFRFL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 376 IKALDLKTPGREDATEDAKATGT-SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG 454
Cdd:TIGR02002 401 IKKLNLKTPGREDATAEAKATGEpSELAFDVVAALGGKENITSLDACITRLRVSVADISKVDVAKLKKLGAAGVLVVGNN 480
|
490 500
....*....|....*....|..
gi 13360943 455 VQAIFGTKSDNLKTEMDEYIRN 476
Cdd:TIGR02002 481 VQAIFGPKSDTIKSEMHDIIRG 502
|
|
| PTS-II-BC-nag |
TIGR01998 |
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B ... |
9-470 |
2.10e-131 |
|
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273920 [Multi-domain] Cd Length: 475 Bit Score: 388.74 E-value: 2.10e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 9 LQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHvMAEAGGSVFANMPLIFAIGVALGFT-NNDGVSALAAVVAYG 87
Cdd:TIGR01998 5 FQKLGRALMLPIATLPVAALLLRIGNATHGADLLVANF-FIAAGGAIFDNLGLLFAIGVAIGMSkDNDGAAALAGLVAYF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 88 IMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVV 167
Cdd:TIGR01998 84 VVTKVLSPPPLAAALGIKSEINMAFSAWKNVFVGILAGLIAGALYNRFSEIKLPEALSFFSGKRLVPIMAGFVGLVLAAL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 168 LSFIWPPIGSAIQTFSQWAAYQNPVVAFgIYGFIERCLVPFGLHHIWNVPFQMQ---IGEYTNAAGQvfhGDIPRYMAgd 244
Cdd:TIGR01998 164 LGYVWPTLYGGIVAFGESISGLGALGAG-IYGFLNRLLIPTGLHHALNSVFWFDvagINDFGNFTGG---GDLNRFKG-- 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 245 pTAGKLSGGFL-FKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAF 323
Cdd:TIGR01998 238 -IAGMFMAGFFpIMMFGLPAAALAMYHTARPERRKQVGGMLLSVAFASFLTGVTEPLEFSFMFLAPVLYALHALLTGLSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 324 PICILLGMRDGTSFSHGLIDFIVLSGN--SSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGRED-----ATEDAKAT 396
Cdd:TIGR01998 317 FIAAMLHWTAGFSFSAGLIDYVLSFNNptANQPLMLLVQGLVFFALYYVVFRFAIRRFNLKTPGREDedpegATAAAVTS 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 13360943 397 GTS---EMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGS-GVQAIFGTKSDNLKTEM 470
Cdd:TIGR01998 397 TGDskmQLAKQYLAALGGHDNLVSIDACITRLRLTLKDTSIVDEPALKALGARGVVKLGKhNLQVILGPLAEIVAGEM 474
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
4-474 |
2.49e-123 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 373.82 E-value: 2.49e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 4 NAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVvshvmAEAGGSVFANMPLIFAIGVALGFT-NNDGVSALAA 82
Cdd:PRK10255 2 NILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFI-----AQAGGAIFDNLALIFAIGVASSWSkDSAGAAALAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 83 VVAYGIMVKTMAVVAPLVlhlpaeeiaskhlaDTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAI 162
Cdd:PRK10255 77 AVGYFVLTKAMVTINPEI--------------NMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 163 FTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAfGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRYMA 242
Cdd:PRK10255 143 VLAAIFGYVWPPVQHAIHAGGEWIVSAGALGS-GIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 243 GDPTAGK-LSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGL 321
Cdd:PRK10255 222 GDGTAGMfMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGI 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 322 AFPICILLGMRDGTSFSHGLIDFIV---LSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKAT-- 396
Cdd:PRK10255 302 SLFVATLLGIHAGFSFSAGAIDYALmynLPAASQNVWMLLVMGVVFFAIYFVLFSAVIRMFNLKTPGREDKEDEIVTEea 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 397 ------GTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVV-VAGSGVQAIFGTKSDNLKTE 469
Cdd:PRK10255 382 nsnteeGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDAMCKRLGASGVVkLNKQTIQVIVGAKAESIGDA 461
|
....*
gi 13360943 470 MDEYI 474
Cdd:PRK10255 462 MKKVV 466
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-474 |
3.91e-100 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 308.02 E-value: 3.91e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 1 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSA--NFSWLPAV-----VSHVMAEAGGSVFANMPLIFAIGVALGFTn 73
Cdd:COG1263 4 KKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALltNPGLLGEGsflsgTYQILNAAGDAVFYFLPLLFAIGAAKGFG- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 74 ndGVSALAAVVAYGIMVKTMAVVAPL-VLHLPAEEIASKHLADTGVLGGIISGAIAAYMfNRFYRIKLPEYLGFFagkrF 152
Cdd:COG1263 83 --GNPALAAVIGYLLVHPTLLNAYAVaGGYISFLGIPTLIGYQGGVFPGILAGWLAAYL-EKFLKKKLPDALGFF----F 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 153 VPIISGLAAIFTGV-VLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEytnaagq 231
Cdd:COG1263 156 VPILTLLIMVPLALlVIGPIWPPIGNGIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHGLNPIFWFLLGG------- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 232 vfHGDIPRYMAgdptagklsggFLFKMYGLPAAAIAIWHSAKPenRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPIL 311
Cdd:COG1263 229 --TGDDGLFPI-----------LAAAMFGQPGAALAVYLKAKP--NKKVKGLAISAALTAFLTGITEPAEFGFNLVAPKL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 312 YIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKaldlKTPGREDATE 391
Cdd:COG1263 294 FIAHAIGGGLGGAIAGLLGVKAFSFGVGGLIDFPSILNPGATNLLLYLIGLVIAFVYYFVFTFLIG----REDEEEEEKL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 392 DAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMD 471
Cdd:COG1263 370 ATKADAKKEEAEAAAAALGGGGGLLLLEADITVLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVI 449
|
...
gi 13360943 472 EYI 474
Cdd:COG1263 450 VII 452
|
|
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
9-471 |
7.04e-97 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 302.04 E-value: 7.04e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 9 LQKVGKSLMLPVSVLPIAGILLGVGSA--------NFSWLPAVVSHV----MAEAGGSVFANMPLIFAIGVALGFT-NND 75
Cdd:PRK10110 15 FQQLGKTFMLPVALLSFCGIMLGIGSSlsshdvitLIPFLGNPVLQAiftwMSKIGSFAFSFLPVMFCIAIPLGLArENK 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 76 GVSALAAVVAYGIMvkTMAVVAPLVLH--LPAEEIASKHLA-----------DTGVLGGIISGAIAAYMFNRFYRIKLPE 142
Cdd:PRK10110 95 GVAAFAGFVGYAVM--NLAVNFWLTNKgiLPTTDAAVLKANniqsilgiqsiDTGILGAVIAGIIVWMLHERFHNIRLPD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 143 YLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFgIYGFIERCLVPFGLHHIWNVPFQMQ- 221
Cdd:PRK10110 173 ALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPM-LFGTGERLLLPFGLHHILVALIRFTd 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 222 -------IGEYTNAAGQVFHGDI--PRYMAGDPTAGK-LSGG----FLFkmyGLPAAAIAIWHSAKPENRAKVGGIMISA 287
Cdd:PRK10110 252 aggtqevCGQTVSGALTIFQAQLscPTTHGFSESATRfLSQGkmpaFLG---GLPGAALAMYHCARPENRHKIKGLLISG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 288 ALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSfSHGLIDFIV---LSGNSSKLWLFPIVGIGY 364
Cdd:PRK10110 329 VIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNT-DGNIIDFVVfgiLHGLSTKWYMVPVVAAIW 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 365 AIVYYTIFRVLIKALDLKTPGREDATED------AKATGTSEM-APALVAAFGGKENITNLDACITRLRVSVADVSKVDQ 437
Cdd:PRK10110 408 FVVYYVIFRFAITRFNLKTPGRDSEVASsiekavAGAPGKSGYnVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVDV 487
|
490 500 510
....*....|....*....|....*....|....*
gi 13360943 438 AGLKKLGAAGVV-VAGSGVQAIFGTKSDNLKTEMD 471
Cdd:PRK10110 488 QALKDNRAIGVVqLNQHNLQVVIGPQVQSVKDEMA 522
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
52-331 |
1.99e-86 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 266.88 E-value: 1.99e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 52 GGSVFANMPLIFAIGVALGF-TNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASkhLADTGVLGGIISGAIAAY 130
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGFgGNPYLGAALAGILVHPVLNNAMGVGAQAVGNFFGFEIAK--VGYTGVVGPIIVGAIALA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 131 MFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGsaIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGL 210
Cdd:TIGR00852 79 LHERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPVG--ISALLHWLYSAGGALGGAIFGFLYRLLVPTGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 211 HHIWNVPFQMQI-GEYTNAAGQVFHGDIPRYMAG-------DPTAG----KLSGGFLFKMYGLPAAAIAIWHSAKPENRA 278
Cdd:TIGR00852 157 HHIFYAIFIQLIaGGTVIGGGQVIPGDALANMAQggaalavFFTAGdakfKSIGLPAAFSAGLGITEPAMYGVALRERRP 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 13360943 279 KVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGM 331
Cdd:TIGR00852 237 FVAGLIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMGI 289
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
13-320 |
4.93e-70 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 225.30 E-value: 4.93e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 13 GKSLMLPVSVLPIAGILLGVGSANFS---------WLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAV 83
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDttglpaggfTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGDGVAGAAGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 84 VAYGIMVKTMAVVAPLVLHLPAE--EIASKHLADTGVLGGIISGAIAAYMFNRFY---RIKLPEYLGFFAGKRFVPIISG 158
Cdd:pfam02378 81 IGLLSFNLAAAISVALTAAGLSGggNILGIGLGATGVFGAIIPGLLAAYLYNRFEkniTIKLPDSLPFFVGKRFVPIITG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 159 L-AAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNA-AGQVFHGd 236
Cdd:pfam02378 161 FvTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPIGGSNPiANQQAYG- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 237 iprymagdPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHA 316
Cdd:pfam02378 240 --------AGAAHILTGGFDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFLFGITEPLEFGFPFVLNPPFFIPA 311
|
....
gi 13360943 317 ILAG 320
Cdd:pfam02378 312 ILAG 315
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
399-474 |
1.44e-31 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 115.99 E-value: 1.44e-31
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13360943 399 SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYI 474
Cdd:COG1264 1 KELAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVDEAALKKLGVKGVVKNGGQVQVIIGPGVDKVADEIEKLL 76
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
377-460 |
1.33e-29 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 110.91 E-value: 1.33e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 377 KALDLKTPGREDATEDAKATGTS----EMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAG 452
Cdd:TIGR00826 1 TRLRLKTPGREKADEEAIAAGEGvkgvFTAAGQIQALGGTGNVNKVDACITRLRVGVADVSKVDDAVLKKLGAHGVNPLQ 80
|
....*...
gi 13360943 453 SGVQAIFG 460
Cdd:TIGR00826 81 RAVQVISG 88
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
399-474 |
2.48e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 104.15 E-value: 2.48e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 13360943 399 SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFGT-KSDNLKTEMDEYI 474
Cdd:cd00212 1 EQLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLgGVKGVVKNGGQYQVIIGPgVADVYKEAIKLLG 78
|
|
| PRK09702 |
PRK09702 |
PTS sugar transporter subunit IIB; |
360-477 |
1.78e-18 |
|
PTS sugar transporter subunit IIB;
Pssm-ID: 77355 [Multi-domain] Cd Length: 161 Bit Score: 82.45 E-value: 1.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 360 VGIGYAIVYYTIFRVLIKALDLKTPGREDA----------------TEDAKATGTSEMAPALVAAFGGKENITNLDACIT 423
Cdd:PRK09702 15 IGLCFTLLYFVVFRTLILQFNMCTPGREDAevklyskaeykasrgqTTAAEPKKELDQAAGILQALGGVGNISSINNCAT 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 13360943 424 RLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH 477
Cdd:PRK09702 95 RLRIALHDMSQtLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSH 149
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
404-434 |
5.85e-12 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 59.69 E-value: 5.85e-12
10 20 30
....*....|....*....|....*....|.
gi 13360943 404 ALVAAFGGKENITNLDACITRLRVSVADVSK 434
Cdd:pfam00367 2 EILEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
395-460 |
2.08e-07 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 53.14 E-value: 2.08e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 13360943 395 ATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFG 460
Cdd:PRK09586 2 AKISSELLNTILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIeGVKGVILSDDQVQVVLG 68
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
399-460 |
9.43e-07 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 50.95 E-value: 9.43e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 13360943 399 SEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFG 460
Cdd:PRK09796 6 AALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIpGVLGVVRSDNQCQVIIG 68
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
368-462 |
4.05e-05 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 45.79 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13360943 368 YYTIFRVLIKALdlktpgrEDATEDAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAA 446
Cdd:PRK14905 251 FHALIADALKAL-------AGSKIDPIIHKFSEIAIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIdCVK 323
|
90
....*....|....*.
gi 13360943 447 GVVVAGSGVQAIFGTK 462
Cdd:PRK14905 324 GLFSIANQYQIILGAG 339
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
400-460 |
1.80e-03 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 40.85 E-value: 1.80e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 13360943 400 EMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKK-LGAAGVVVAGSGVQAIFG 460
Cdd:PRK09824 5 ELAREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKnPGVIMVVESGGQFQVVIG 66
|
|
| PRK11007 |
PRK11007 |
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional |
405-464 |
7.55e-03 |
|
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional
Pssm-ID: 182896 Cd Length: 473 Bit Score: 38.51 E-value: 7.55e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 13360943 405 LVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAA-GVVVAGSGVQAIFGTKSD 464
Cdd:PRK11007 13 LIELVGGRENIATVSHCITRLRFVLNDPANADPKEIEQLPMVkGCFTNAGQFQVVIGTEVG 73
|
|
| |
