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Conserved domains on  [gi|1398297881|dbj|BAB38276|]
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cell division protein ZapB [Escherichia coli O157:H7 str. Sakai]

Protein Classification

upstream stimulatory factor 2( domain architecture ID 10015110)

upstream stimulatory factor 2 (USF2) acts as transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 1-79 6.77e-26

septal ring assembly protein ZapB; Provisional


:

Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 90.53  E-value: 6.77e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
Cdd:PRK15422   1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
 
Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 1-79 6.77e-26

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 90.53  E-value: 6.77e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
Cdd:PRK15422   1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 1-79 1.10e-18

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 72.31  E-value: 1.10e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
Cdd:COG3074    1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQENEELQSENEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 1-78 3.02e-13

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 58.43  E-value: 3.02e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEvqnaqhqREELERENNHLKEQQNGWQERLQALLGRMEE 78
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEE-------ANELEEENQQLKQERNQWQERIRGLLGKLDE 71
 
Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 1-79 6.77e-26

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 90.53  E-value: 6.77e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
Cdd:PRK15422   1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 1-79 1.10e-18

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 72.31  E-value: 1.10e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
Cdd:COG3074    1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQENEELQSENEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 1-78 3.02e-13

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 58.43  E-value: 3.02e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1398297881  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEvqnaqhqREELERENNHLKEQQNGWQERLQALLGRMEE 78
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEE-------ANELEEENQQLKQERNQWQERIRGLLGKLDE 71
PRK13922 PRK13922
rod shape-determining protein MreC; Provisional
 5-61 7.83e-04

rod shape-determining protein MreC; Provisional


Pssm-ID: 237560  Cd Length: 276  Bit Score: 36.11  E-value: 7.83e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1398297881   5 VFEKLEAKVQQAIDtITLLQMEIEELKEKNNSLSQEVQNAQhqreELERENNHLKEQ 61
Cdd:PRK13922   57 PREFVSGVFESLAS-LFDLREENEELKKELLELESRLQELE----QLEAENARLREL 108
PRK00409 PRK00409
recombination and DNA strand exchange inhibitor protein; Reviewed
 10-78 9.18e-03

recombination and DNA strand exchange inhibitor protein; Reviewed


Pssm-ID: 234750 [Multi-domain]  Cd Length: 782  Bit Score: 32.88  E-value: 9.18e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1398297881  10 EAKVQQAIDTITLLQMeIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEE 78
Cdd:PRK00409  506 EAKKLIGEDKEKLNEL-IASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEK 573
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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