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Conserved domains on  [gi|21752199|dbj|BAC04142|]
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unnamed protein product [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CCDC71L super family cl21212
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
 33-107 6.81e-15

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


The actual alignment was detected with superfamily member pfam15374:

Pssm-ID: 464682  Cd Length: 383  Bit Score: 72.56  E-value: 6.81e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21752199    33 EEKVVYSRSQLSLAdSTKALGDAFKLFMPRSTEFMSSDAELWSFLCSLKHQ-FSPHILRSKDVYGYSSCRALVPDP 107
Cdd:pfam15374   2 EEKAVHSWSRISSA-GQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEgYQPTILRSKDVYGYSSCTARTPSQ 76
 
Name Accession Description Interval E-value
CCDC71L pfam15374
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
 33-107 6.81e-15

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


Pssm-ID: 464682  Cd Length: 383  Bit Score: 72.56  E-value: 6.81e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21752199    33 EEKVVYSRSQLSLAdSTKALGDAFKLFMPRSTEFMSSDAELWSFLCSLKHQ-FSPHILRSKDVYGYSSCRALVPDP 107
Cdd:pfam15374   2 EEKAVHSWSRISSA-GQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEgYQPTILRSKDVYGYSSCTARTPSQ 76
 
Name Accession Description Interval E-value
CCDC71L pfam15374
Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing ...
 33-107 6.81e-15

Coiled-coil domain-containing protein 71L; The protein family, Coiled-coil domain-containing protein 71L, is a domain of unknown function, which is found in eukaryotes.


Pssm-ID: 464682  Cd Length: 383  Bit Score: 72.56  E-value: 6.81e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21752199    33 EEKVVYSRSQLSLAdSTKALGDAFKLFMPRSTEFMSSDAELWSFLCSLKHQ-FSPHILRSKDVYGYSSCRALVPDP 107
Cdd:pfam15374   2 EEKAVHSWSRISSA-GQKALEEALRVFNPMSKDLSDTETQLVAFLQGLREEgYQPTILRSKDVYGYSSCTARTPSQ 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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