|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 656.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 1 MPHHYILTLFGL----LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHA 76
Cdd:MTH00119 6 RKSHPLLKIINNslidLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 77 IGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWL 156
Cdd:MTH00119 86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 157 WGGFAINDPTLTRFFALHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTS 236
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 237 FLPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVM 316
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 73760241 317 FWTLVSTFTVITWAATKPVEPPFTMISQMTSTAYFT-FFIMNPLMGWTENKMTKT 370
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-355 |
1.98e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.01 E-value: 1.98e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 10 FGLLPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIH 89
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 90 IARGLYYGSY-----LNketWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAIND 164
Cdd:COG1290 107 MFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 165 PTLTRFFALH-FILPFIILALSLIHVILLHEEGSSNPLG----TNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLP 239
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 240 diFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIP--NKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMF 317
Cdd:COG1290 264 --INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350
....*....|....*....|....*....|....*...
gi 73760241 318 WTLVSTFTVITWAATKPvePPFTMISQMTSTAYFTFFI 355
Cdd:COG1290 342 VAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFL 377
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
13-198 |
1.73e-74 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 229.56 E-value: 1.73e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:cd00284 13 LPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLN--KETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRF 170
Cdd:cd00284 93 GLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRF 172
|
170 180
....*....|....*....|....*...
gi 73760241 171 FALHFILPFIILALSLIHVILLHEEGSS 198
Cdd:cd00284 173 FALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-196 |
2.34e-69 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 216.09 E-value: 2.34e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:pfam00033 4 LPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYG--SYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRF 170
Cdd:pfam00033 84 GLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRF 163
|
170 180
....*....|....*....|....*.
gi 73760241 171 FALHFILPFIILALSLIHVILLHEEG 196
Cdd:pfam00033 164 FSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
251-341 |
3.39e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFR---PMTQVMFWTLVSTFTVI 327
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVALWLGI 145
|
90
....*....|....
gi 73760241 328 twAATKPVEPPFTM 341
Cdd:TIGR01156 146 --GATLPIDKSLTL 157
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 656.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 1 MPHHYILTLFGL----LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHA 76
Cdd:MTH00119 6 RKSHPLLKIINNslidLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 77 IGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWL 156
Cdd:MTH00119 86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 157 WGGFAINDPTLTRFFALHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTS 236
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 237 FLPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVM 316
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 73760241 317 FWTLVSTFTVITWAATKPVEPPFTMISQMTSTAYFT-FFIMNPLMGWTENKMTKT 370
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
13-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 540.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00156 11 LPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGR 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00156 91 GIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00156 171 FHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPAN 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00156 251 PLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGA 330
|
330 340
....*....|....*....|....*.
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIMNP 358
Cdd:MTH00156 331 RPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
13-356 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 527.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00191 18 LPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00191 98 GLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFT 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00191 178 FHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPAN 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00191 258 PLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGG 337
|
330 340
....*....|....*....|....
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIM 356
Cdd:MTH00191 338 QPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
13-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 524.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00131 21 LPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGR 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00131 101 GLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00131 181 FHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPAN 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00131 261 PLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGG 340
|
330 340 350
....*....|....*....|....*....|....*.
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFF-IMNPLMGWTENKM 367
Cdd:MTH00131 341 MPVEHPFIIIGQVASVLYFSLFlVLMPLAGWLENKA 376
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
13-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 522.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00145 22 LPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00145 102 GLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFS 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00145 182 LHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPAN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00145 262 PMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGA 341
|
330 340 350
....*....|....*....|....*....|....*
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIMNPLMGWTENKM 367
Cdd:MTH00145 342 CPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNI 376
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
13-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 517.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00100 21 LPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGR 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00100 101 GLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00100 181 FHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPAN 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00100 261 PLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGG 340
|
330 340 350
....*....|....*....|....*....|....*...
gi 73760241 333 KPVEPPFTMISQMTSTAYFT-FFIMNPLMGWTENKMTK 369
Cdd:MTH00100 341 QPVEHPFIIIGQLASILYFLiILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
13-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 516.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00074 22 LPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00074 102 GLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00074 182 FHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPAN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00074 262 PLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGG 341
|
330 340 350
....*....|....*....|....*....|....*...
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFI-MNPLMGWTENKMTK 369
Cdd:MTH00074 342 QPVEDPFIEIGQAASILYFLLFIiIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
13-369 |
4.25e-171 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 481.87 E-value: 4.25e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00016 22 LPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00016 102 GIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00016 182 LHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPAN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00016 262 PLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGG 341
|
330 340 350
....*....|....*....|....*....|....*..
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIMNPLMGWTENKMTK 369
Cdd:MTH00016 342 RPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
13-367 |
1.83e-168 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 474.96 E-value: 1.83e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00034 21 LPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGR 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00034 101 GLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00034 181 FHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPAN 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00034 261 PLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGS 340
|
330 340 350
....*....|....*....|....*....|....*.
gi 73760241 333 KPVEPPFTMISQMTSTAYFT-FFIMNPLMGWTENKM 367
Cdd:MTH00034 341 QPVEYPFILLGQVASVLYFSlFLFFFPLISYLENKL 376
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
13-367 |
1.92e-155 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 442.22 E-value: 1.92e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00022 20 LPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGR 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00022 100 GLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00022 180 LHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQAN 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00022 260 SLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGS 339
|
330 340 350
....*....|....*....|....*....|....*.
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFF-IMNPLMGWTENKM 367
Cdd:MTH00022 340 QVVEEPFILIGQLLSFFYFFYFlVLIPLLGELENQL 375
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
9-371 |
9.48e-155 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 440.30 E-value: 9.48e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 9 LFGLLPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYI 88
Cdd:MTH00053 18 MFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 89 HIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLT 168
Cdd:MTH00053 98 HIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLN 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 169 RFFALHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNF 248
Cdd:MTH00053 178 RFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENF 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 249 SKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVIT 328
Cdd:MTH00053 258 KQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLT 337
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 73760241 329 WAATKPVEPPFTMISQMTSTAYFTFF-IMNPLMGWTENKMTKTI 371
Cdd:MTH00053 338 WIGGQPVEEPYILIGQIASIFYFAYFlILMPLAGYLENKLLKLV 381
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
13-360 |
5.10e-148 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 423.18 E-value: 5.10e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00224 22 LPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00224 102 GLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFS 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00224 182 FHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMAN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00224 262 PLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGG 341
|
330 340
....*....|....*....|....*...
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIMNPLM 360
Cdd:MTH00224 342 RPVEDPFEGIGQVFTILYFSYFIISPAI 369
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-355 |
1.98e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.01 E-value: 1.98e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 10 FGLLPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIH 89
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 90 IARGLYYGSY-----LNketWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAIND 164
Cdd:COG1290 107 MFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 165 PTLTRFFALH-FILPFIILALSLIHVILLHEEGSSNPLG----TNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLP 239
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 240 diFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIP--NKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMF 317
Cdd:COG1290 264 --INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350
....*....|....*....|....*....|....*...
gi 73760241 318 WTLVSTFTVITWAATKPvePPFTMISQMTSTAYFTFFI 355
Cdd:COG1290 342 VAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
13-365 |
1.96e-116 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 343.07 E-value: 1.96e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00033 18 LPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00033 98 GLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFL--LLTMMIIILLITTSFLPDIFNDPDNFSK 250
Cdd:MTH00033 178 LHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILgfLILFGVFVIIGIEPRIETLLQDPENFIQ 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWA 330
Cdd:MTH00033 258 ANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWI 337
|
330 340 350
....*....|....*....|....*....|....*..
gi 73760241 331 ATKPV-EPPFTMISQMTSTAYFTFF-IMNPLMGWTEN 365
Cdd:MTH00033 338 GSAPAgADPYVLIGRIATIFYFGYFlVLVPLLGYLSN 374
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-356 |
1.91e-109 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 324.20 E-value: 1.91e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00086 10 LPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00086 90 GLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLtMMIIILLITTSFLPDIFNDPDNFSKAN 252
Cdd:MTH00086 170 LHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEAD 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 253 PLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARlrpMTFRPMTQVMFWTLVSTFTVITWAAT 332
Cdd:MTH00086 249 PMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYT---SCLNKLNKFLVFSFIVVNVILSWLGQ 325
|
330 340
....*....|....*....|....
gi 73760241 333 KPVEPPFTMISQMTSTAYFTFFIM 356
Cdd:MTH00086 326 CLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-347 |
1.56e-81 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 252.98 E-value: 1.56e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:MTH00046 12 LPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:MTH00046 92 ALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 173 LHFILPFIILALSLIHVILLHEEGSSNPL-GTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKA 251
Cdd:MTH00046 172 VHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 252 NPLVTPQHIKPEWYFLFAYGILRSIPNKLGGaLALIMSIMILFTLPFTHTArlrpMTFRPMTQVMFWTLVSTFTVITWAA 331
Cdd:MTH00046 252 DPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGS----SVYSVWRQVNFWLIVSLFFSLSYLG 326
|
330
....*....|....*.
gi 73760241 332 TKPVEPPFTMISQMTS 347
Cdd:MTH00046 327 GCHPEYPYLLISQLFS 342
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
13-198 |
1.73e-74 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 229.56 E-value: 1.73e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:cd00284 13 LPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYGSYLN--KETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRF 170
Cdd:cd00284 93 GLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRF 172
|
170 180
....*....|....*....|....*...
gi 73760241 171 FALHFILPFIILALSLIHVILLHEEGSS 198
Cdd:cd00284 173 FALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-196 |
2.34e-69 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 216.09 E-value: 2.34e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 13 LPVATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIAR 92
Cdd:pfam00033 4 LPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 93 GLYYG--SYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRF 170
Cdd:pfam00033 84 GLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRF 163
|
170 180
....*....|....*....|....*.
gi 73760241 171 FALHFILPFIILALSLIHVILLHEEG 196
Cdd:pfam00033 164 FSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
80-239 |
8.23e-41 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 141.61 E-value: 8.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 80 SMFFICIYIHIARGLYYGSYLNKE--TWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLW 157
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 158 GGFAINDPTLTRFFALHF-ILPFIILALSLIHVILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTS 236
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
...
gi 73760241 237 FLP 239
Cdd:pfam13631 161 INP 163
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
199-345 |
1.20e-40 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 140.47 E-value: 1.20e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 199 NPLGTNPDIDKIPFHPYHSYKDFLLLTMMIIILLITTSFLPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPN 278
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 73760241 279 KLGGALALIMSIMILFTLPFTHTARLRPmTFRPMTQVMFWTLVSTFTVITWAATKPVEPPFTMISQM 345
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
251-350 |
1.31e-36 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 128.37 E-value: 1.31e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFRPMTQVMFWTLVSTFTVITWA 330
Cdd:pfam00032 2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81
|
90 100
....*....|....*....|
gi 73760241 331 ATKPVEPPFTMISQMTSTAY 350
Cdd:pfam00032 82 GKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
25-201 |
2.77e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 128.68 E-value: 2.77e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 25 FGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIARGLYYGSYLNKE- 103
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 104 -TWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFALH-FILPFII 181
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 73760241 182 LALSLIHVILLHEEGSSNPL 201
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
15-201 |
9.06e-31 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 116.36 E-value: 9.06e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 15 VATNISTWWNFGSMLLSCLAIQIMTGFFLAVHYTANINLAFSSIIHISRDVPHGWMMQNLHAIGASMFFICIYIHIARGL 94
Cdd:CHL00070 26 VPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 95 YYGSYLNKE--TWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTSLTTWLWGGFAINDPTLTRFFA 172
Cdd:CHL00070 106 LTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185
|
170 180 190
....*....|....*....|....*....|
gi 73760241 173 LH-FILPFIILALSLIHVILLHEEGSSNPL 201
Cdd:CHL00070 186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
250-341 |
9.11e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 53.85 E-value: 9.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 250 KANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTA-RLRPMTFRPMTQVMFwtLVSTFTVIt 328
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVnKFQNPFRRPVATTVF--LIGTAVAL- 141
|
90
....*....|....*.
gi 73760241 329 W---AATKPVEPPFTM 341
Cdd:CHL00058 142 WlgiGATLPIDKSLTL 157
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
221-341 |
1.75e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 53.26 E-value: 1.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 221 FLLLTMMIIILLITTSFL-PDIFNDPdnfskANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFT 299
Cdd:COG5679 41 FPVVILGTIALCIGLAVLdPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFI 115
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 73760241 300 HTA-RLRPMTFRP--MTQVMFWTLVSTFTVItwAATKPVEPPFTM 341
Cdd:COG5679 116 ENVnKFQNPFRRPvaTAVFLFGTLVTLWLGI--GAALPIDKSLTL 158
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
251-341 |
3.39e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73760241 251 ANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALIMSIMILFTLPFTHTARLRPMTFR---PMTQVMFWTLVSTFTVI 327
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFRrpvATTVFLFGTVVALWLGI 145
|
90
....*....|....
gi 73760241 328 twAATKPVEPPFTM 341
Cdd:TIGR01156 146 --GATLPIDKSLTL 157
|
|
| |
