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Conserved domains on  [gi|77999862|dbj|BAE46896|]
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hypothetical protein, partial [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5529 super family cl39207
Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.
 2-67 2.73e-36

Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.


The actual alignment was detected with superfamily member pfam17669:

Pssm-ID: 435961  Cd Length: 185  Bit Score: 119.71  E-value: 2.73e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 77999862     2 ASPLVPCPSTPRLASASHPEELCELEIRIKELELLTITGDGFDSQSYTFLKALKDEKLQGLKTKQP 67
Cdd:pfam17669 112 VSPLAPGSTTPRLASASHPEELCELEIRIKELELLTITGDGFDSQRYKFLKALKDEKLQGLKTRQP 177
 
Name Accession Description Interval E-value
DUF5529 pfam17669
Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.
 2-67 2.73e-36

Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.


Pssm-ID: 435961  Cd Length: 185  Bit Score: 119.71  E-value: 2.73e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 77999862     2 ASPLVPCPSTPRLASASHPEELCELEIRIKELELLTITGDGFDSQSYTFLKALKDEKLQGLKTKQP 67
Cdd:pfam17669 112 VSPLAPGSTTPRLASASHPEELCELEIRIKELELLTITGDGFDSQRYKFLKALKDEKLQGLKTRQP 177
 
Name Accession Description Interval E-value
DUF5529 pfam17669
Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.
 2-67 2.73e-36

Family of unknown function (DUF5529); This is a family of unknown function found in Chordata.


Pssm-ID: 435961  Cd Length: 185  Bit Score: 119.71  E-value: 2.73e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 77999862     2 ASPLVPCPSTPRLASASHPEELCELEIRIKELELLTITGDGFDSQSYTFLKALKDEKLQGLKTKQP 67
Cdd:pfam17669 112 VSPLAPGSTTPRLASASHPEELCELEIRIKELELLTITGDGFDSQRYKFLKALKDEKLQGLKTRQP 177
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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