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Conserved domains on  [gi|381380600|dbj|BAL97417|]
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hypothetical protein RGE_40810 [Rubrivivax gelatinosus IL144]

Protein Classification

cysteine-rich CWC family protein( domain architecture ID 10627396)

cysteine-rich CWC family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cys_rich_CWC pfam14375
Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of ...
 9-55 1.41e-07

Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 74 and 102 amino acids in length. It contains eight conserved cysteines, including a conserved CWC sequence motif.


:

Pssm-ID: 433916  Cd Length: 49  Bit Score: 43.18  E-value: 1.41e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 381380600   9 CPRCGASFHCGIAGPG-PCACTQVKLDTRPLRAMMSL-YPSCLCPDCLR 55
Cdd:pfam14375  1 CPLCGASNECAAAAGTsACWCSSVTLPAALLERLPELrYKACLCPACLR 49
 
Name Accession Description Interval E-value
Cys_rich_CWC pfam14375
Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of ...
 9-55 1.41e-07

Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 74 and 102 amino acids in length. It contains eight conserved cysteines, including a conserved CWC sequence motif.


Pssm-ID: 433916  Cd Length: 49  Bit Score: 43.18  E-value: 1.41e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 381380600   9 CPRCGASFHCGIAGPG-PCACTQVKLDTRPLRAMMSL-YPSCLCPDCLR 55
Cdd:pfam14375  1 CPLCGASNECAAAAGTsACWCSSVTLPAALLERLPELrYKACLCPACLR 49
 
Name Accession Description Interval E-value
Cys_rich_CWC pfam14375
Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of ...
 9-55 1.41e-07

Cysteine-rich CWC; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 74 and 102 amino acids in length. It contains eight conserved cysteines, including a conserved CWC sequence motif.


Pssm-ID: 433916  Cd Length: 49  Bit Score: 43.18  E-value: 1.41e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 381380600   9 CPRCGASFHCGIAGPG-PCACTQVKLDTRPLRAMMSL-YPSCLCPDCLR 55
Cdd:pfam14375  1 CPLCGASNECAAAAGTsACWCSSVTLPAALLERLPELrYKACLCPACLR 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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