|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 519.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKWQFEYT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 1806500516 321 KKATLLPPLIITSTMLLPLTPMLSVLD 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.21e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 393.02 E-value: 6.21e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSiNTNLLMLMALT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKWQFEYT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 1806500516 321 KKATLLPPLIITSTMLLPLTPMLSVL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.14e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 358.37 E-value: 2.14e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKWQFeYT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRT-KP 319
|
330 340
....*....|....*....|...
gi 1806500516 321 KKATLLPPLIITSTMLLPLTPML 343
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMI 342
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
3.04e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 353.07 E-value: 3.04e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKWQFEyT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK-N 319
|
330 340
....*....|....*....|...
gi 1806500516 321 KKATLLPPLIITSTMLLPLTPML 343
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTI 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
5-340 |
3.19e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 279.12 E-value: 3.19e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 5 ILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQW 84
Cdd:MTH00041 5 VLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 85 VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALTSVLV 164
Cdd:MTH00041 85 SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 165 GGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLITSMI 244
Cdd:MTH00041 165 GGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 245 LILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPS-----TNNMKMKWQFEY 319
Cdd:MTH00041 245 ILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQhsislFSWRNSGNITVY 324
|
330 340
....*....|....*....|.
gi 1806500516 320 TKKATLLPPLIITSTMLLPLT 340
Cdd:MTH00041 325 GVILSILSSISILGLLLIPLF 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.07e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 262.98 E-value: 6.07e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKWQFEYT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1806500516 321 KKaTLLPPLIITSTMLLPLTPMLSVL 346
Cdd:MTH00200 321 SN-LLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.09e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 186.57 E-value: 2.09e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 sgqwvISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQIspsINTNLLMLMALT 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYStalTMFPSTNNMKMKWQFEYT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|...
gi 1806500516 321 KKATLLPPLIITSTMLLPLTPML 343
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
4.69e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 182.78 E-value: 4.69e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLY 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISkisnpiasIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINT-NLLMLMAL 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 160 TSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMwNKFPL 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1806500516 240 ITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALTMFPSTNNMKMKW 315
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-299 |
2.09e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 176.12 E-value: 2.09e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 1 MKPPILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTInlly 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 sgQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 161 SVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLI 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1806500516 241 TSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYS 299
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-300 |
9.32e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 150.59 E-value: 9.32e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 8 IIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVIS 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 88 kisnpiaSIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPsiNTNLLMLMALTSVLVGGW 167
Cdd:MTH00197 82 -------VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 168 GGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLITSMILIL 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1806500516 248 MLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYST 300
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-296 |
6.97e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 132.55 E-value: 6.97e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 8 IIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAI-IPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVI 86
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 87 SKISNPIAS------------IMMTTALTMKLGLSPFHFWVPEVTQG-----ITLMS------GMILLtwqkiapMSILY 143
Cdd:COG1007 186 AGIAAALAAgganspllllglVLVLAGLAFKLSAVPFHMWTPDVYEGaptpvTAFLAtapkiaAFAAL-------LRLLV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 144 QISPSIN---TNLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM-AAIITYNPTM---MILNLTLYILMTLSTF 216
Cdd:COG1007 259 EAFPGLAadwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLGvsaALFYLLAYLFMNLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 217 MLFML----NSSTTTLS-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLY 291
Cdd:COG1007 339 AVILLlsrkGGEAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
....*
gi 1806500516 292 FYLRL 296
Cdd:COG1007 419 YYLRV 423
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.03e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.36 E-value: 1.03e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 13 IMTGTMIVMLSSHWLLIWIGFEMNMLAI-IPILMKKYNPRAMEASTKYFLTQATASMLLMMGVT-------------INL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 79 LYSGQWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPsiNTNLLMLMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 159 LTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMI----LNLTLYILMTLSTFMLFMLNSSTTTL--SLSH 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIqaslVYLFIYIIMSICVFSIILALNVYKNLiiEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1806500516 233 MWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-296 |
1.80e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 117.74 E-value: 1.80e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 6 LIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAI-IPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 85 VISKISNPIASIM------------MTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSI--- 149
Cdd:TIGR01770 184 NFEDLLLFLSNGMlnisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 150 ----NTNLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTM----MILNLTLYILMTLSTFMLFML 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 222 NSST---TTLSLSHMWNKF---PLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLR 295
Cdd:TIGR01770 344 LRSYkdeWIEYISDFAGLFktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
.
gi 1806500516 296 L 296
Cdd:TIGR01770 424 V 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
5.71e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 5.71e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 23 SSHWLLIWIGFEMNMLAIIP-ILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKISNP--------- 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 93 --IASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILL-TWQKIAP-----MSILYQISPSINTNLLMLMALTSVLV 164
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 165 GGWGGLNQTQLRKIMAYSSIAHMGWM----AAIITYNPTMMILNLTLYILMTLSTFMLFML-----NSSTTTLSLSHMWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1806500516 236 KFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAA 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
13-296 |
1.81e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.92 E-value: 1.81e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 13 IMTGTMIVMLSS-HWLLIWIGFEMNMLAI-IPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKIS 90
Cdd:PRK05777 111 FALLGMMVMVSAnDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 91 NPIAS------------IMMTTALTMKLGLSPFHFWVPEVTQG-----ITLMS------GMILLtwqkiapMSILYQISP 147
Cdd:PRK05777 191 KALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGaptpvTAFLAtapkiaAFAVL-------LRLLVVAFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 148 SINT---NLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM-AAIITYNPTM---MILNLTLYILMTLSTFMLFM 220
Cdd:PRK05777 264 GLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEGysaVLFYLLAYLFMTLGAFGVIS 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 221 LNSS----TTTLS-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLR 295
Cdd:PRK05777 344 LLRRkggeAESISdFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
.
gi 1806500516 296 L 296
Cdd:PRK05777 424 V 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-296 |
2.18e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 111.65 E-value: 2.18e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 4 PILIIIMATimtGTMIVMLSSHWLLIWIGFEMNMLAI-IPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTinLLYSG 82
Cdd:MTH00199 100 PILILIVAL---GSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCA--LLYGL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 83 ------QWVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSinTNLLML 156
Cdd:MTH00199 175 tgetsiQGINSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPV--TNVVLI 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 157 MALTSVLVGGWGGLNQTQLRKIMAYSSIAHMG---WMAAIITYNPTMMIL-NLTLYILMTLSTFMLFMLNSSTTTL--SL 230
Cdd:MTH00199 253 CAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQASLiYMIIYVIMSICSFSIILSLKLTKGLivEV 332
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1806500516 231 SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRL 296
Cdd:MTH00199 333 SGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.20e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 97.91 E-value: 1.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 14 MTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQW-------VI 86
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLnmadlaaRL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 87 SKISNP---IASIMMTTALTMKLGLSPFHFWVPEV-----TQGITLMSGmiLLTwqKIAPMSIL---YQISPSINTN--- 152
Cdd:COG0651 197 AELDPGlllAAFALLLVGFGIKAALFPLHFWLPDAypaapSPVSALLSG--LLT--KVGVYAILrvlTLLFGADPALflg 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 153 -LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILM-TLSTFMLFM----LNSSTT 226
Cdd:COG0651 273 tLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNhALAKALLFLaagaIERATG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1806500516 227 TLSLSHM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRL 296
Cdd:COG0651 353 TRDLDKLgglGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-263 |
8.04e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 81.25 E-value: 8.04e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 7 IIIMATIMTGTMIVMLSSHWLLIWIGFEMnmLAIIPILMKKY---NPRAMEASTKYFLTQATASMLLMMGVTinLLY--- 80
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYGSS--LLYgls 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 81 SGQWVISKISNPIAS----------IMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIA----PMSILYQIS 146
Cdd:PRK02504 189 GGSTQLSAIALALITspslglalalVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 147 PSINTN---LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGW-MAAIITYNPT---MMILNLTLYILMTLSTFM-- 217
Cdd:PRK02504 269 PSFDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvMIGLVAGTEAgyaSMVFYLLAYLFMNLGAFAcv 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1806500516 218 -LFMLNSSTTTLS-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPK 263
Cdd:PRK02504 349 iLFSLRTGTDQISdYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
7.20e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.51 E-value: 7.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 51 RAMEASTKYFLTQATASMLLMMGvtINLLYS---GQWVISKISNP-------------IASIMMTTALTMKLGLSPFHFW 114
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYG--FSWLYGlsgGEIELQEIVNGlintqmynspgisIALIFITVGIGFKLSLAPFHQW 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 115 VPEVTQGITLMSGMILLTWQKIAPMS----ILYQISPSINT---NLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHM 187
Cdd:CHL00049 237 TPDVYEGSPTPVVAFLSVTSKVAASAlatrIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 188 GW-MAAIITYNP----TMMILNLTLYILMTLSTF---MLFMLNSSTTTL-SLSHMWNKFPLITSMILILMLSLGGLPPLS 258
Cdd:CHL00049 317 GYvIIGIIVGDSndgyASMITYMLFYIFMNLGTFaciVLFGLRTGTDNIrDYAGLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 1806500516 259 GFIPK 263
Cdd:CHL00049 397 GFFGK 401
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
14-307 |
9.10e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 72.34 E-value: 9.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 14 MTGTMIVMLSSHWLLIWIGFEMNMLA--IIPILMKKYNpraMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKISN 91
Cdd:PRK08668 108 LAGVLGVFLANDLLTLYIFWEIMTFSsfMMVPMGKKES---RKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 92 P-----------IASIMMTTALTMKLGLSPFHFWVPEV--------------------TQGITLMSGMILLTwqKIAPMS 140
Cdd:PRK08668 185 GlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDAyseapqsfsavlsgqlsklgAYGFLLVLYVLPGT--KLFSEF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 141 ILYQISPSINTNLLMLMALTsVLVGGWGGLNQTQLRKIMAYSSIAHMGW-MAAIITYNPT------MMILNLTLYILMTL 213
Cdd:PRK08668 263 GTYRGVPLFNYILAWLGNIS-IIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLgfagglFHVFNHALFKGLFF 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 214 STFMLFMLNSSTTTLS-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYF 292
Cdd:PRK08668 342 LIFAAVIYRTGTTKISeMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLY 421
|
330
....*....|....*
gi 1806500516 293 YLRLTYSTALTMFPS 307
Cdd:PRK08668 422 VFRPLAGVFLGQLPS 436
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
8.83e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.12 E-value: 8.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 16 GTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAM---------EASTKYFLTQATASMLLMMGVTINLLYSGQ--- 83
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 84 -----------WVISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILyqISPSINTN 152
Cdd:MTH00198 280 lgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 153 LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILN----LTLYILMTLSTFML------FMLN 222
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAswtyAVTYLVSALASFTVictleeFGTR 437
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 223 SSTTT---------------LSLSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMII 267
Cdd:MTH00198 438 TPTSRqrdgsfgnynlvrrlVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-298 |
3.32e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.21 E-value: 3.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 93 IASIMMTTALTMKLGLSPFHFWVPE-----------------VTQGITLMSGMILLTWQKIAPMSILYQIspsintnLLM 155
Cdd:PRK08375 203 TAFGFVLLALALKAAVFPLHTWLPRaypaappvvtallsglvTKVAVYALIRIYFTVFGGDFRFALGLGW-------LLA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 156 LMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM-AAIITYNPTMM---ILNLTLYILMTLSTFML---FMLNSSTTTL 228
Cdd:PRK08375 276 VLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYIlLGLALLTPLALaagLLHLLHHALMKGALFLAagaIEVTYGTRRL 355
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1806500516 229 S-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTY 298
Cdd:PRK08375 356 SeLSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-299 |
4.83e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 66.92 E-value: 4.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 47 KYNPRAMEASTKYFLTQATASMLLMMGV--------TIN-----LLYSGQWVIS--------KISNPIASIMMTTALTMK 105
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALaflyatfgTLNmadlsAKIRGLSFPLtgglagnpPLALGVALALALWAFTIK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 106 LGLSPFHFWVPEV-----TQGITLMSGMILLTwQKIAPMSILYQI-------SPSINT--NLLMLMALTSVLVGGWGGLN 171
Cdd:PRK12667 237 AAIFPNHFWLPDAhpaapSPVSAMLSGLVVNV-GAYAIIRFLYTIfgispslIDFRAAlsPILIILGAVSAIIGALMMVV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 172 QTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILM-TLSTFMLFMLN-------SSTTTLSLSHMWNKFPLITSM 243
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINhAIAKSLLFLASgvfihaaGTRDIDELAGLGRKMPIASFA 395
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1806500516 244 ILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYS 299
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
2.97e-11 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 58.04 E-value: 2.97e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1806500516 291 YFYLRLTYSTALTMFPSTNNMKMKWQFEYTKKATLLPPLIITSTMLLPLTP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
15-287 |
1.20e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 62.26 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 15 TGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASmLLMMGVTINLLYSGQWVISkISNPIA 94
Cdd:TIGR01972 117 AGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGS-LLMLLAILGLYFLGGGTFD-LLELLN 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 95 SIMMTT-----------ALTMKLGLSPFHFWVPEV-TQGITLMSGMILLTWQKIAP---MSILYQISPS---INTNLLML 156
Cdd:TIGR01972 195 LPLPFGvqtwlflaffiAFAVKVPLFPLHTWLPDAhVEAPTAGSVILAGVLLKMGTygfLRFNLPLFPDaslYFAPVLAA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 157 MALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMA-AIITYNPTMMILNLTLYILMTLSTFMLF----MLNSSTTTLSLS 231
Cdd:TIGR01972 275 LGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlGIFSFNELGISGAVFQMISHGLITAALFllvgVLYERAHTRDIA 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1806500516 232 HM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNmiiiPTLMAIAAL 287
Cdd:TIGR01972 355 KYgglANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVN----PVVAFLAAL 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
5-287 |
4.07e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.87 E-value: 4.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 5 ILIIIMATIMTGtmiVMLSSHWLLIWIGFEmnmLAIIP--ILMKKY-NPRAMEASTKYFLTQATASMLLMMGVTINLLYS 81
Cdd:COG1008 115 ALLLLLEAGMIG---VFLALDLFLFYVFWE---LMLIPmyFLIGIWgGERRIYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 82 GQW-------VISKISNPIASIMMTT---ALTMKLGLSPFHFWVPEV-----TQGITLMSGmILLtwqKIAPMSIL---Y 143
Cdd:COG1008 189 GALtfdiaelAAAPLPLTAQLLLFLAffiAFAVKVPMFPFHTWLPDAhveapTAGSVLLAG-VLL---KMGGYGLLrfaL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 144 QISP---SINTNLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM-AAIITYNPTMMILNLTLYILMTLSTFMLF 219
Cdd:COG1008 265 PLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLQGAVLQMVSHGLITAALF 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1806500516 220 ----MLNSSTTTLSLSHM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNmiiiPTLMAIAAL 287
Cdd:COG1008 345 llvgVLYDRTHTRDIADLgglAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVN----PWLAILAAL 415
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-300 |
4.23e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 60.94 E-value: 4.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 49 NPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKISNPIASIMMTTALTM-----------KLGLSPFHFWVPE 117
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLillllllgafgKSAQFPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 118 -----------------VTQGITLmsgmilltwqkIAPMSILYQISPSINTnLLMLMALTSVLVGGWGGLNQTQLRKIMA 180
Cdd:COG1009 237 amegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVLA 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 181 YSSIAHMGWMaaiitynptMMILNLTLYI-----LMTLSTFM--LFMLNSS----TTTLSLSHM---WNKFPLITSMILI 246
Cdd:COG1009 305 YSTVSQLGYM---------FLALGVGAYVaalfhLLTHAFFKalLFLGAGSvihaTGTRDIRKMgglRKKMPITAITFLI 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1806500516 247 LMLSLGGLPPLSGFIPKWMIIQEL--TKNNMIIIPTLMAIAALLNLYFYLRLTYST 300
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAAleAGGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-266 |
4.92e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.50 E-value: 4.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 48 YNPRAMEASTKYFLTQATASMLLMMGvtINLLYsGQW-------VISKIS------NPIASIMMTTALTMKLGLSPFHFW 114
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLG--IALLY-GQYgtlnmayLAVKMSenptvvAKIALALFIAGLAMKSGAVPVHMW 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 115 VP----EVTQGITLMsgMILLTWQKI-APMSILYQI-SPSINTN----LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSI 184
Cdd:PRK08376 243 LPdaypAAPSSISAM--LLVIKQAGLyALARVLFSIyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 185 AHMGWM-----AAIITYNPTMM--------------ILNLTLYILMTLSTFMLFMLNSSTTTLS-LSHMWNKFPLITSMI 244
Cdd:PRK08376 321 SQIGYMllglgVGLAALGDPAMasygeialaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNeLGGLARTMPKTTIAF 400
|
250 260
....*....|....*....|..
gi 1806500516 245 LILMLSLGGLPPLSGFIPKWMI 266
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-263 |
5.71e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 60.83 E-value: 5.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 110 PFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTN-----LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSI 184
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 185 AHMGWMAAII----TYNPTMMILNLTLYILMTLSTFMLF-MLNSSTTTLS---LSHMWNKFPLITSMILILMLSLGGLPP 256
Cdd:PRK12650 306 SQLGWIVATIgvgtPFALTAAVVHTLAHALFKSSLFMLIgVVDHQAGTRDirrLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
....*..
gi 1806500516 257 LSGFIPK 263
Cdd:PRK12650 386 LFGFVSK 392
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-332 |
8.26e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.96 E-value: 8.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 92 PIASIMMTTALTMKLGLSPFhFWVPEV-----TQGITLMSGmiLLT----WQKIAPMSILYQISPSINTNLLMLMALTSV 162
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAyhtpnTEVAALFAA--LLTkvgiYALIRVFTLLFPQERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 163 LVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYIL--MTLSTFMLFM------LNSSTTTLSLSHMW 234
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVhdMVVKTALFLIagslvrLTGYRSLQYLGGLY 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 235 NKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTystaLTMFPSTNNMKMK 314
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF----FLAYWGDKDGEEV 439
|
250
....*....|....*...
gi 1806500516 315 wQFEYTKKATLLPPLIIT 332
Cdd:PRK12663 440 -NFKPIPLYRKLPLSILA 456
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-331 |
1.97e-08 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 55.85 E-value: 1.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 111 FHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT-----SVLVGGWGGLNQTQLRKIMAYSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 186 HMGWMAAIITYNPtmmiLNLTLYILMTLSTF--MLFM--------LNSSTTTLSLSHMWNKFPLITSMILILMLSLGGLP 255
Cdd:MTH00020 309 QLGYMVVACGLSH----YSISLFHLMNHAFFkaLLFLsagsvihaLSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1806500516 256 PLSGFIPKWMIIQ-ELTKNNMIIIPTLMAIAALLNLYFYLRLTYstaLTMFPSTNNMKMKWQFEYTKKATLLPPLII 331
Cdd:MTH00020 385 YLTGFYSKDLILElAFGQYYLIFAYWLGCFSALLTAFYSIRLIY---LTFLSNTNLKKAVFFHLHEGDWNLLLPLGI 458
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
69-263 |
1.74e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.00 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 69 LLMMGVTinllySGQWVISKI-SNPIASIMMTTALTM-------KLGLSPFHFWVPEVTQGITLMSG------M----IL 130
Cdd:PRK12644 177 IIILGQA-----AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAylhaaaMvkagIY 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 131 LtwqkIAPMSILYQISPSINTNLLMLMALTsVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITY-NPTMMILNLTLYI 209
Cdd:PRK12644 252 L----VARLAPGFADVPVWRPTVLVLGLAT-MLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMLL 326
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1806500516 210 LMTLSTFMLFM----LNSSTTTLS---LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPK 263
Cdd:PRK12644 327 AHALFKAALFLvvgiIDHSTGTRDirkLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-342 |
1.80e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.43 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 152 NLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYIL-MTLSTFMLFMLNSS------ 224
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnHSIVKSALFMVSGSisyhfg 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 225 -TTTLSLSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTALT 303
Cdd:PRK12662 360 tTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFE 439
|
170 180 190
....*....|....*....|....*....|....*....
gi 1806500516 304 MfPSTNNMKMKWQFEYTKKATLLPPLIITSTMLLPLTPM 342
Cdd:PRK12662 440 S-RMVESKANDKAFKTPNAMVLCIWIMAILSIIVGIYPI 477
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
5.98e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.10 E-value: 5.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 56 STKYFLTQATASMLLMMGVTInlLYS--GQWVISKISNPIA-------------SIMMTTALTMKLGLSPFHFWVPEVTQ 120
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAI--LYSvvGTLNMADISVKIAelsagqtglitvvAILFLFVFATKAGLFPLYFWLPGSYY 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 121 G-----ITLMSGmiLLT----WQKIAPMSILYQISPSINTNLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM- 190
Cdd:PRK07691 238 AppiaiAALFGA--LLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIl 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 191 AAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKF-------PLITSMILILMLSLGGLPPLSGFIPK 263
Cdd:PRK07691 316 VGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMgglikryPVLGWMFFIAALSLAGIPPLSGFYGK 395
|
250 260 270
....*....|....*....|....*....|...
gi 1806500516 264 WMIIQELTKNNMIIIPTLMAIAALLNLYFYLRL 296
Cdd:PRK07691 396 FFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
35-331 |
1.25e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.77 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 35 MNMLAIIPILMKKYNP--RAMEASTKYFLTQATASMLLMMGV--------TINLLYSGQwVISKIsNPIASIMMTTALTM 104
Cdd:PRK08377 137 MEITAITAYALTAYNKtgEAAEASMKYIVLGGIGSSFFLIGValiygatgTLNMAHIAQ-LAGTI-DPTVAQVGLALLIF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 105 KLG----LSPFHFWVPEVTQG----ITLMSGMILLTWQKIAPMSILYQISPSIN----TNLLMLMALTSVLVGGWGGLNQ 172
Cdd:PRK08377 215 GLAveaeLFPLNAWAPDAYQAaphpITVMFSAFVVKAGLYAMARILYLMQNANGwssvLKLVIIMATLTVFFAELSALRQ 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 173 TQLRKIMAYSSIAHMGWMAAIITYNPTM--------MILNLTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFPLITSMI 244
Cdd:PRK08377 295 KNVKRMIAYSSIGQVGMIALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALAL 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 245 LILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYstalTMFPSTNNMKMKWQFEYTKKAT 324
Cdd:PRK08377 375 TIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH----TMWFKGEGERIRENAAIGIILL 450
|
....*..
gi 1806500516 325 LLPPLII 331
Cdd:PRK08377 451 LLAALIV 457
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-268 |
4.98e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.96 E-value: 4.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 152 NLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM------------AAIITYNPTMMILNLTLYILMTLSTfmlf 219
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMvfgialstvaglSGAIYYVAHHITVQTTLFLVVGLIE---- 349
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1806500516 220 mLNSSTTTLS-LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:PRK12665 350 -RQAGSSSLRrLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-299 |
6.07e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.81 E-value: 6.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 17 TMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTI-------NLLYSGQWVISKi 89
Cdd:PRK06589 129 GVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliytktgNLDFVSGGLFSK- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 90 SNPIASIMMTTALTMKLGLSPFHFWVPE-----------------VTQGITLMSGMILLTWqKIAPMSILYQISpsintN 152
Cdd:PRK06589 208 NQSIILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYLQRIFAEF-----N 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 153 LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGW--MAAIITYNPTMMILNLTLyILMTLSTFMLFMLNSSTTTLS- 229
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHL-VSHSFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 230 ------LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIA----ALLNLYFYLRLTYS 299
Cdd:PRK06589 361 edqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasSILSALYLLKILSS 440
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
18-302 |
1.10e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 18 MIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKISNPI---- 93
Cdd:PRK06277 114 SAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnp 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 94 -------ASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQK---IAPMSILYQI--SPSINTNLLMLMALTS 161
Cdd:PRK06277 194 tspviygGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKfvlVALMLVIFKLfgGLSYFPSAQGVLIALS 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 162 VLVGGWG---GLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMI-------LNLTLYI-LMTLSTFMLFMLNSSTTTLSL 230
Cdd:PRK06277 274 VLAMVFGvvmALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKsALFLGAGIVSYRTKTSNLRKL 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1806500516 231 SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIAALLNLYFYLRLTYSTAL 302
Cdd:PRK06277 354 GGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-277 |
1.43e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 6 LIIIMATIMTGTMIVMLSSHWLLIWIGFE-MNMLAIIPILMKKYNPRAmeasTKYFLTQATASMLLMM-GVTINLLYSGQ 83
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLFLAGWEiMTIPSYVAIALTKKNKRP----AFVFMAFGELSTVLILaGFAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 84 WVISKISNPIASIMMTTALTMKLGLSPFHF--WVPEV------TQGITLMSGMILLTWQKIAPMSILYQISPSINTNL-L 154
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAhgnapsNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLtI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 155 MLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAA-----IITYNPTMMILNLTLYILM------TLSTFMLFMLNS 223
Cdd:PRK06459 230 LAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVIlysfahSVAKTGLFLSSG 309
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1806500516 224 STTTLSLSHMWNKFPLITSMILILM-LSLGGLPPLSGFIPKWMIIQELTKNNMII 277
Cdd:PRK06459 310 LQEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESLFMFAYVL 364
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
1.95e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 111 FHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLMALT-----SVLVGGWGGLNQTQLRKIMAYSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 186 HMGWMAAIITYNPTMmilNLTLYILMTLSTFMLFMLNSSTTTL-----------SLSHMWNKFPLITSMILILMLSLGGL 254
Cdd:MTH00032 324 QLGYMVLIIGIEGSH---NVGLFHLVNHAFFKALLFLSAGSVIhsttvdeqdmrKMGGLIHSIPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 1806500516 255 PPLSGFIPKWMIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-298 |
2.82e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.60 E-value: 2.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 101 ALTMKLGLSPFHFWVPEV-----TQGITLMSGmILLTWQKIAPMSILYQISPSINTNL---LMLMALTSVLVGGWGGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAG-ILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 173 TQLRKIMAYSSIAHMGwMAAIITYNPTMMILNLTLYILMT--LSTFMLFMLNSSTTTLSLSHMWNKF-------PLITSM 243
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAhgIVSSLLFILVTILYDRHHTRLIKYYrglsitmPIWGTI 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1806500516 244 ILILMLSLGGLPPLSGFIPKWMIIQELTKNNMII---IPTLMAIAALLNLYFYLRLTY 298
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIgvfVCSGVILSAVYSFYFANRVTF 454
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
4-300 |
2.94e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.82 E-value: 2.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 4 PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPRAME-ASTKYFLTQATASMLLMMGVTINLLYSG 82
Cdd:PRK12646 110 PRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 83 QWVISKISN-----------PIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINT 151
Cdd:PRK12646 190 TNNITEILGqadhiknhglfIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 152 N-----LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAII------TYNPT-------MMILNLTLYILMTL 213
Cdd:PRK12646 270 SnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQdaiasiyVFVLFAALFHLMNH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 214 STF--MLFM----LNSSTTTLS---LSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNN---------M 275
Cdd:PRK12646 350 AIFkcALFMgvgiIDHEAGTRDiriLSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisM 429
|
330 340
....*....|....*....|....*
gi 1806500516 276 IIIPTLMAIAALLNLYFYLRLTYST 300
Cdd:PRK12646 430 IIIVFIGVIASIFTFTYALYMVKEV 454
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
153-333 |
6.87e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.55 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 153 LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYN-PTMMILNLTLYILMTLSTF-----MLFMLNSSTT 226
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFicagnIIHSHGHSQD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 227 TLSLSHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNM-IIIPTLMAIAALLNLYFYLRLTYstalTMF 305
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMpIMTLILMFLSTSLTAAYSMRLSY----FSL 396
|
170 180
....*....|....*....|....*...
gi 1806500516 306 PSTNNMKMKWQFEYTKKATLLPPLIITS 333
Cdd:MTH00209 397 WGPNSSKSLNSSFDQNKLNLKPMLVLTL 424
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
66-286 |
1.03e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.90 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 66 ASMLLMMGVTINllySGQWVI-----SKISNPIASIMMTTALTmKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMS 140
Cdd:MTH00207 152 VMLLLSIGWTLN---QGHWSItnmwqTDMNNYIALSIMIAAMT-KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVF 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 141 ILYQISPSIN-----TNLLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNptmmILNLTLYILMTLST 215
Cdd:MTH00207 228 LLIRFYPFLSstywfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLG----MPKLALFHLITHAL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 216 F--MLF-----MLNSSTTTLSLSHM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAIA 285
Cdd:MTH00207 304 FkaLLFvcagsLIHSHHHSQDLRTMgnlTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFL 383
|
.
gi 1806500516 286 A 286
Cdd:MTH00207 384 A 384
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-263 |
1.12e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.67 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 110 PFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSI------NTNLLMLMALTsVLVGGWGGLNQTQLRKIMAYSS 183
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggtplwQTILPLFGGLT-MLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 184 IAHMGWMAAIITYNPTMMILNLTLYILM-TLSTFMLFM----LNSSTTTLSLSHM---WNKFPLITSMILILMLSLGGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAhSLYKGALFMvagiIDHETGTRDITKLgglRRAMPITAAAALLAALSMAGLP 371
|
....*...
gi 1806500516 256 PLSGFIPK 263
Cdd:PRK12647 372 PLFGFLAK 379
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
153-298 |
1.50e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 40.19 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 153 LLMLMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGW-MAAIITYNPT----MMILNLTLYILMTLSTFMLFMLNSSTTT 227
Cdd:PRK05846 279 IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFvTLGIFAGNQLgiqgAIFQMISHGLSSAALFLLVGVLYDRLHT 358
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1806500516 228 LSLSHM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNN---MIIIPTLMAIAALLNLYFYLRLTY 298
Cdd:PRK05846 359 RDIADYgglAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNpviAFIATTGLILAAVYSLWLYQRVMF 435
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.67e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 107 GLSPFHFWVPEVTQGI-----TLMSGMIL-LTWQKIAPMSILYQISPSINTNLLMLMALTSVLVGGWGGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANAsapaaALFSTVVMkIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 181 YSSIAHMG--------WMAAIITYNPTMMILNLT--LYILMTLSTF--MLFMLNSST-------TTLSLSHMWNKFPLIT 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFksVLFLGAGSVwfrtghrDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 1806500516 242 SMILILMLSLGGLPPLSGFIPKWMIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-331 |
2.07e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.99 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 105 KLGLspfHFWVPEVTQGITLMSGMILLTWQKIAPM------SILYQISPSINTNLLMLMALTSvLVGGWGGLNQTQLRKI 178
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVfliirsGPLFEGSPLALTIVTILGALTA-FFAATVGVVQNDLKKV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 179 MAYSSIAHMGWMAAI--ITYNPTmmilnlTLYILMTLSTF--MLFM--------LNSSTTTLSLSHMWNKFPLITSMILI 246
Cdd:MTH00210 303 IAYSTCSQLGYMVMVcgISNYST------SLFHLMNHAFFkaLLFLsagsvihaVSDEQDMRKMGGLIKSIPFTYVMILI 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 247 LMLSLGGLPPLSGFIPKWMIIqELT--KNNMIIIPTLMAIAALLNLYFYLRLTYstaLTMFPSTNNMKMKWQFEYTKKAT 324
Cdd:MTH00210 377 GSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIY---LTFITNTNSKKEVFIGVHESSWN 452
|
....*..
gi 1806500516 325 LLPPLII 331
Cdd:MTH00210 453 ITFPLLL 459
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-270 |
3.91e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 38.94 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 4 PILIIIMA-TIMTGTMIVMLsshwlLIWigfEMNMLAIIPILMKKYN-PRAMEASTKYFLTQATASMLLMMGVTINLLYS 81
Cdd:PRK08667 118 ALFILSMLgVVASANTFSFL-----FFW---EIMALSSFFLVMNDYQeEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 82 GQWVISKISNPIASIMMT-----TALTMKLGLSPFHFWVPEVTQGI-----TLMSGMILLTWQKIAPMSILYQISPSINT 151
Cdd:PRK08667 190 GSFELSPLGASAGILSLVflllfLGFGIKAGIIPFHKWLPYAHPASpsnvsALMSGVMLKVAVYGLVRFLMDVLSPELWW 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 152 NLLMLMA-LTSVLVGGWGGLNQTQLRKIMAYSSIAHMG--------WMAAIITYNPTMMILNLTLYILMTLS----TFML 218
Cdd:PRK08667 270 GVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDTLALLALGGALFHSLNhalfKSLL 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1806500516 219 FMLNSS----TTTLSLSHM---WNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQEL 270
Cdd:PRK08667 350 FLTAGSvvhaTGTRNIEKMgglVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
19-190 |
7.41e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.14 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 19 IVMLSSHWLLIWIGFEMNMLAIIPILMKKYN-PRAMEASTKYFLTQATASMLLMMGVTINLLYSGQWVISKISNPIASIM 97
Cdd:PRK08168 115 LLVLSDHLLVLIAAWAAISLALHRLLCFYPDrPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1806500516 98 MTTALT-----------MKLGLSPFHFWVPEVTQ-----------GITLMSGMILLtwqKIAPmsiLYQISPSINTnLLM 155
Cdd:PRK08168 195 ASPSLQaaalllvlaviLKTAQLPVHGWLIQVMEaptpvsallhaGVVNLGGFVLI---RFAP---LLEQAPPARW-LLV 267
|
170 180 190
....*....|....*....|....*....|....*
gi 1806500516 156 LMALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:PRK08168 268 LVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| |
