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Conserved domains on  [gi|259646914|sp|C4L5T3|]
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RecName: Full=tRNA(Met) cytidine acetate ligase

Protein Classification

nucleotidyltransferase family protein( domain architecture ID 12064472)

nucleotidyltransferase family protein such as tRNA(Met) cytidine acetate ligase (TmcAL) that catalyzes the formation of ac4C34, the N4-acetylcytidine (ac4C) at the anticodon first position (position 34) of elongator tRNAMet, using acetate and ATP as substrates

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HIGH_NTase1 pfam05636
HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases
 9-360 1.58e-133

HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases


:

Pssm-ID: 428556  Cd Length: 386  Bit Score: 386.90  E-value: 1.58e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914    9 EYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRADRFASASV 88
Cdd:pfam05636   1 EYNPFHNGHLYHLEQAKELTGADVIIAVMSGNFVQRGEPAIIDKWTRAEMALENGA-DLVIELPVVYAVQSAEYFAKGAV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   89 SIAEQLR-CQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFD--LTRPNNILGY 165
Cdd:pfam05636  80 SLLNALGvVDSLSFGSESGDIELLQKIADILAEEPEEYKELLKEYLKKGLSYPKAREKALASYLGLILelLSSPNNILGI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  166 HYAKAAK----SIQLHTVKRLGADYHDPSLMD-VMSATGIRAHYLDIGE---VRAVPASTEAMFRT--RPMTHWEHYWPV 235
Cdd:pfam05636 160 EYLKALKklnsPIKPVTIKREGAGYHDEELSGsIASATAIRKALKGGGDeelSRYVPESTLEILENeiKKGVFWEDFFPL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  236 LQFKLRTLPLHTMMELVGIDASLAPRLKQAGVE-PSFERALAAVSTRRYTRTAIQRAFVAVLLHwLKDEAPTRFDEV--P 312
Cdd:pfam05636 240 LKYKLLTMSPEELAQIYDVSEGLENRIKKAARKaNSFEELIELIKTKRYTYTRIQRILLHILLG-ITKEDMKSLKSNgkP 318

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 259646914  313 YVRPLAFNDLGRLALRDVKD--DVPLVSKFD---------ARLDFEARVTEAYRLPLQD 360
Cdd:pfam05636 319 YIRVLGFNKKGRELLKEIKKksSLPIITKVAkakklsearELLELDIRATDLYSLLYKN 377
 
Name Accession Description Interval E-value
HIGH_NTase1 pfam05636
HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases
 9-360 1.58e-133

HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases


Pssm-ID: 428556  Cd Length: 386  Bit Score: 386.90  E-value: 1.58e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914    9 EYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRADRFASASV 88
Cdd:pfam05636   1 EYNPFHNGHLYHLEQAKELTGADVIIAVMSGNFVQRGEPAIIDKWTRAEMALENGA-DLVIELPVVYAVQSAEYFAKGAV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   89 SIAEQLR-CQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFD--LTRPNNILGY 165
Cdd:pfam05636  80 SLLNALGvVDSLSFGSESGDIELLQKIADILAEEPEEYKELLKEYLKKGLSYPKAREKALASYLGLILelLSSPNNILGI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  166 HYAKAAK----SIQLHTVKRLGADYHDPSLMD-VMSATGIRAHYLDIGE---VRAVPASTEAMFRT--RPMTHWEHYWPV 235
Cdd:pfam05636 160 EYLKALKklnsPIKPVTIKREGAGYHDEELSGsIASATAIRKALKGGGDeelSRYVPESTLEILENeiKKGVFWEDFFPL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  236 LQFKLRTLPLHTMMELVGIDASLAPRLKQAGVE-PSFERALAAVSTRRYTRTAIQRAFVAVLLHwLKDEAPTRFDEV--P 312
Cdd:pfam05636 240 LKYKLLTMSPEELAQIYDVSEGLENRIKKAARKaNSFEELIELIKTKRYTYTRIQRILLHILLG-ITKEDMKSLKSNgkP 318

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 259646914  313 YVRPLAFNDLGRLALRDVKD--DVPLVSKFD---------ARLDFEARVTEAYRLPLQD 360
Cdd:pfam05636 319 YIRVLGFNKKGRELLKEIKKksSLPIITKVAkakklsearELLELDIRATDLYSLLYKN 377
TmcAL COG1323
tRNA-Met C34-N4-acetylcytidine synthase TmcAL [Translation, ribosomal structure and biogenesis] ...
 1-374 3.71e-131

tRNA-Met C34-N4-acetylcytidine synthase TmcAL [Translation, ribosomal structure and biogenesis]; tRNA-Met C34-N4-acetylcytidine synthase TmcAL is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440934  Cd Length: 401  Bit Score: 381.45  E-value: 3.71e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   1 MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRA 80
Cdd:COG1323    1 MKAVGIIAEYNPFHNGHLYHIEEAKKLTGADVVIAVMSGNFVQRGEPAILDKWARAKMALKNGV-DLVIELPVVFAVQSA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  81 DRFASASVSIAEQLR-CQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYP---SFDL 156
Cdd:COG1323   80 EYFAYGAVSLLDALGvVDHLCFGSESGDIELLKEIAKILIEEPEEFKELLKKYLKKGLSYPKARSLALEELLGdelAEDL 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 157 TRPNNILGYHYAKAAK----SIQLHTVKRLGADYHDPSL-MDVMSATGIRAHYL--DIGEV-RAVPAST-----EAMFRT 223
Cdd:COG1323  160 SSPNNILGLEYLKALKklnsPIKPLTIKRIGAGYHDEELtGKIASATAIRKALLegDLEKLkNYVPPATyeilkEEIKEG 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 224 RPMTHWEHYWPVLQFKLRTLPLHTMMELVGIDASLAPRLKQAGVE-PSFERALAAVSTRRYTRTAIQRAFVAVLLHWLKD 302
Cdd:COG1323  240 RGPVSWEDFFPLLLYKLLTSSPEELANIYDVSEGLENRIKKAARKaGSFEELIELIKTKRYTWTRIQRILLHILLGITKD 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 303 E-APTRFDEVPYVRPLAFNDLGRLALRDVKDD--VPLVSKF----DARLDFEARVTEAYRLPLQDDALI---EHRQRPQF 372
Cdd:COG1323  320 DlESFLKKGPPYIRVLGFNKKGRELLKEIKKKasLPIITKVskykKSLLELDIRATDLYSLLYPNPKPRkgqDFTRPPII 399


                 ..
gi 259646914 373 IS 374
Cdd:COG1323  400 IK 401
PRK13670 PRK13670
nucleotidyltransferase;
1-357 4.61e-116

nucleotidyltransferase;


Pssm-ID: 237464  Cd Length: 388  Bit Score: 342.57  E-value: 4.61e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   1 MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRA 80
Cdd:PRK13670   1 MKVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGV-DLVVELPFLYSVQSA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  81 DRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPS--FDLTR 158
Cdd:PRK13670  80 DFFAEGAVSILDALGVDSLVFGSESGDIEDFQKIAKILNEEPEEFKKLLKELLKKGLSYPQARSEALEEFLGEinFDLST 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 159 PNNILGYHYAKA----AKSIQLHTVKRLGADYHDPSLMDVM-SATGIRAHYL--DIGEV-RAVPASTEAMFRTRPMTH-- 228
Cdd:PRK13670 160 PNNILGLEYAKAiaklGSNIKLHTIKREGAGYHDEELDGEFaSATAIRKALLekDLDELkKFVPKATLELLKRYIGPFvs 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 229 WEHYWPVLQFKLRTLPLHTMMELVGIDASLAPRLKQAGVEP-SFERALAAVSTRRYTRTAIQRAFVAVLLHwLKDEAPTR 307
Cdd:PRK13670 240 WEDYFPFLKYQLITLSHEDLRQIYQVSEGLENRIKKAIKKAsSFDEFVELVKTKRYTYTRIQRLLTYILLN-ATKEDVEK 318

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 259646914 308 FDEVPYVRPLAFNDLGRLALRDVKDD--VPLVSKFDAR--LDFEARVTEAYRLP 357
Cdd:PRK13670 319 TSLPPYIRVLGFTEKGQQYLKKIKKKssLPIITKISKKpwLELDIKATNIYQLI 372
 
Name Accession Description Interval E-value
HIGH_NTase1 pfam05636
HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases
 9-360 1.58e-133

HIGH Nucleotidyl Transferase; This family consists of HIGH Nucleotidyl Transferases


Pssm-ID: 428556  Cd Length: 386  Bit Score: 386.90  E-value: 1.58e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914    9 EYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRADRFASASV 88
Cdd:pfam05636   1 EYNPFHNGHLYHLEQAKELTGADVIIAVMSGNFVQRGEPAIIDKWTRAEMALENGA-DLVIELPVVYAVQSAEYFAKGAV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   89 SIAEQLR-CQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSFD--LTRPNNILGY 165
Cdd:pfam05636  80 SLLNALGvVDSLSFGSESGDIELLQKIADILAEEPEEYKELLKEYLKKGLSYPKAREKALASYLGLILelLSSPNNILGI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  166 HYAKAAK----SIQLHTVKRLGADYHDPSLMD-VMSATGIRAHYLDIGE---VRAVPASTEAMFRT--RPMTHWEHYWPV 235
Cdd:pfam05636 160 EYLKALKklnsPIKPVTIKREGAGYHDEELSGsIASATAIRKALKGGGDeelSRYVPESTLEILENeiKKGVFWEDFFPL 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  236 LQFKLRTLPLHTMMELVGIDASLAPRLKQAGVE-PSFERALAAVSTRRYTRTAIQRAFVAVLLHwLKDEAPTRFDEV--P 312
Cdd:pfam05636 240 LKYKLLTMSPEELAQIYDVSEGLENRIKKAARKaNSFEELIELIKTKRYTYTRIQRILLHILLG-ITKEDMKSLKSNgkP 318

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 259646914  313 YVRPLAFNDLGRLALRDVKD--DVPLVSKFD---------ARLDFEARVTEAYRLPLQD 360
Cdd:pfam05636 319 YIRVLGFNKKGRELLKEIKKksSLPIITKVAkakklsearELLELDIRATDLYSLLYKN 377
TmcAL COG1323
tRNA-Met C34-N4-acetylcytidine synthase TmcAL [Translation, ribosomal structure and biogenesis] ...
 1-374 3.71e-131

tRNA-Met C34-N4-acetylcytidine synthase TmcAL [Translation, ribosomal structure and biogenesis]; tRNA-Met C34-N4-acetylcytidine synthase TmcAL is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440934  Cd Length: 401  Bit Score: 381.45  E-value: 3.71e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   1 MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRA 80
Cdd:COG1323    1 MKAVGIIAEYNPFHNGHLYHIEEAKKLTGADVVIAVMSGNFVQRGEPAILDKWARAKMALKNGV-DLVIELPVVFAVQSA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  81 DRFASASVSIAEQLR-CQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYP---SFDL 156
Cdd:COG1323   80 EYFAYGAVSLLDALGvVDHLCFGSESGDIELLKEIAKILIEEPEEFKELLKKYLKKGLSYPKARSLALEELLGdelAEDL 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 157 TRPNNILGYHYAKAAK----SIQLHTVKRLGADYHDPSL-MDVMSATGIRAHYL--DIGEV-RAVPAST-----EAMFRT 223
Cdd:COG1323  160 SSPNNILGLEYLKALKklnsPIKPLTIKRIGAGYHDEELtGKIASATAIRKALLegDLEKLkNYVPPATyeilkEEIKEG 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 224 RPMTHWEHYWPVLQFKLRTLPLHTMMELVGIDASLAPRLKQAGVE-PSFERALAAVSTRRYTRTAIQRAFVAVLLHWLKD 302
Cdd:COG1323  240 RGPVSWEDFFPLLLYKLLTSSPEELANIYDVSEGLENRIKKAARKaGSFEELIELIKTKRYTWTRIQRILLHILLGITKD 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 303 E-APTRFDEVPYVRPLAFNDLGRLALRDVKDD--VPLVSKF----DARLDFEARVTEAYRLPLQDDALI---EHRQRPQF 372
Cdd:COG1323  320 DlESFLKKGPPYIRVLGFNKKGRELLKEIKKKasLPIITKVskykKSLLELDIRATDLYSLLYPNPKPRkgqDFTRPPII 399


                 ..
gi 259646914 373 IS 374
Cdd:COG1323  400 IK 401
PRK13670 PRK13670
nucleotidyltransferase;
1-357 4.61e-116

nucleotidyltransferase;


Pssm-ID: 237464  Cd Length: 388  Bit Score: 342.57  E-value: 4.61e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   1 MQKTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRA 80
Cdd:PRK13670   1 MKVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGV-DLVVELPFLYSVQSA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  81 DRFASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPS--FDLTR 158
Cdd:PRK13670  80 DFFAEGAVSILDALGVDSLVFGSESGDIEDFQKIAKILNEEPEEFKKLLKELLKKGLSYPQARSEALEEFLGEinFDLST 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 159 PNNILGYHYAKA----AKSIQLHTVKRLGADYHDPSLMDVM-SATGIRAHYL--DIGEV-RAVPASTEAMFRTRPMTH-- 228
Cdd:PRK13670 160 PNNILGLEYAKAiaklGSNIKLHTIKREGAGYHDEELDGEFaSATAIRKALLekDLDELkKFVPKATLELLKRYIGPFvs 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 229 WEHYWPVLQFKLRTLPLHTMMELVGIDASLAPRLKQAGVEP-SFERALAAVSTRRYTRTAIQRAFVAVLLHwLKDEAPTR 307
Cdd:PRK13670 240 WEDYFPFLKYQLITLSHEDLRQIYQVSEGLENRIKKAIKKAsSFDEFVELVKTKRYTYTRIQRLLTYILLN-ATKEDVEK 318

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 259646914 308 FDEVPYVRPLAFNDLGRLALRDVKDD--VPLVSKFDAR--LDFEARVTEAYRLP 357
Cdd:PRK13670 319 TSLPPYIRVLGFTEKGQQYLKKIKKKssLPIITKISKKpwLELDIKATNIYQLI 372
PRK13671 PRK13671
nucleotidyltransferase;
3-297 1.38e-48

nucleotidyltransferase;


Pssm-ID: 184228  Cd Length: 298  Bit Score: 166.03  E-value: 1.38e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   3 KTAIIAEYNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAiDLVIELPTQYGVQRADR 82
Cdd:PRK13671   2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQRGEIAVASFEKRKKIALKYGV-DKVIKLPFEYATQAAHI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914  83 FASASVSIAEQLRCQTLSFGSESGDIDAILHAARSHVEETPRYKEALKKALQEGHSSAQASSRAFRTVYPSfDLTRPNNI 162
Cdd:PRK13671  81 FAKGAIKKLNKEKIDKLIFGSESNDIELMYKIANTIKENEEEYNQLLKKNLKQGYSFPKASSLALKELTGS-EIVMPNDI 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 163 LGYHYAKAA----KSIQLHTVKRlGADYHDPSLMD-VMSATGIRAHyldIGEVRAVPASTEAMFRTRPMThWEHYWPVLQ 237
Cdd:PRK13671 160 LGFEYIKQIvnnnYPIQPYCIKR-TVGFHSENPEDnYASATYLRKM---IFENKDISKYSPMKFKKPPKS-IENLYKEFQ 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914 238 FKLRTLPLHTMMELVGIDASLAPRLKQAGVEPSFERALAAVSTRRYTRTAIQRAFVAVLL 297
Cdd:PRK13671 235 KIVRNTSKEKLAKIWLVSEGIENLFKKNINAPNYDSFVNKCNSKRYTSSRIKRIMLYVLL 294
CTP_transf_like pfam01467
Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; ...
 10-79 8.27e-04

Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase. It also includes putative adenylyltransferases, and FAD synthases.


Pssm-ID: 396172 [Multi-domain]  Cd Length: 134  Bit Score: 39.23  E-value: 8.27e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259646914   10 YNPFHNGHYYQAQTARHETGADVMIAIMSAQFTQRGEPASFDKWKRAKAAVESGAIDLVIELPTQYGVQR 79
Cdd:pfam01467   6 FDPIHLGHLRLLEQAKELFDEDLIVGVPSDEPPHKLKRPLFSAEERLEMLELAKWVDEVIVVAPWELTRE 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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