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Conserved domains on  [gi|3874276|emb|CAB07312|]
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MFS domain-containing protein [Caenorhabditis elegans]

Protein Classification

major facilitator superfamily domain-containing protein 7( domain architecture ID 13024452)

major facilitator superfamily domain-containing protein 7 belongs to the major facilitator superfamily (MFS) of transporters that facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
15-438 2.84e-144

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340957  Cd Length: 419  Bit Score: 418.98  E-value: 2.84e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   15 ERWFILLATTALICSNIMQWVSFSAQIDQTNMFFcgpneYKNCSAAFLSNQIYQIVAVIVSIIGMYFATVFGTLPTLRLS 94
Cdd:cd17399   1 RRWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILG 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   95 AVFNIVGAAIRLIASLPSLQNFFWRQFLMIIGTSIAAAAQMYFVVFSKIAESWFYPRHRASANVACSNSLELGVVLGTVL 174
Cdd:cd17399  76 AWLNFIGAVIRVISSLPFVDPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  175 PSIIVPASFtkdivsswTFFLLNSIIAVVCIIPLFLLFVLCRRSVPKTPPSASSQHESSgPVTSGIFKCLKDRQFLIQIF 254
Cdd:cd17399 156 SPLIVKSSE--------DIFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILML 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  255 VYSINFAIANGLIYTSNAINY---RGYNLKGYPIAIATMVCMFSAYFVGVIADRTRKFKLIAIInALVVAVCVLVLRLYL 331
Cdd:cd17399 227 CFGGGIGLFNALSTLLEQILCpsgYSNNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIEVTKV-CFCLAVIFLVAFLVV 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  332 IKTytgWYDSVIVCTLLSIIMSCCAIHTPIGNEMGVETTYPVQESISTGVLNTFGQAWLFCLYFIMYSLQESNWVY---- 407
Cdd:cd17399 306 SRF---PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLSVYdlpi 382
                       410       420       430
                ....*....|....*....|....*....|....*..
gi 3874276  408 ------KNNRKGGSWELALDFWAGMSILNFIVAVIFL 438
Cdd:cd17399 383 qcassaSGNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
 
Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
15-438 2.84e-144

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340957  Cd Length: 419  Bit Score: 418.98  E-value: 2.84e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   15 ERWFILLATTALICSNIMQWVSFSAQIDQTNMFFcgpneYKNCSAAFLSNQIYQIVAVIVSIIGMYFATVFGTLPTLRLS 94
Cdd:cd17399   1 RRWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILG 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   95 AVFNIVGAAIRLIASLPSLQNFFWRQFLMIIGTSIAAAAQMYFVVFSKIAESWFYPRHRASANVACSNSLELGVVLGTVL 174
Cdd:cd17399  76 AWLNFIGAVIRVISSLPFVDPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  175 PSIIVPASFtkdivsswTFFLLNSIIAVVCIIPLFLLFVLCRRSVPKTPPSASSQHESSgPVTSGIFKCLKDRQFLIQIF 254
Cdd:cd17399 156 SPLIVKSSE--------DIFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILML 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  255 VYSINFAIANGLIYTSNAINY---RGYNLKGYPIAIATMVCMFSAYFVGVIADRTRKFKLIAIInALVVAVCVLVLRLYL 331
Cdd:cd17399 227 CFGGGIGLFNALSTLLEQILCpsgYSNNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIEVTKV-CFCLAVIFLVAFLVV 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  332 IKTytgWYDSVIVCTLLSIIMSCCAIHTPIGNEMGVETTYPVQESISTGVLNTFGQAWLFCLYFIMYSLQESNWVY---- 407
Cdd:cd17399 306 SRF---PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLSVYdlpi 382
                       410       420       430
                ....*....|....*....|....*....|....*..
gi 3874276  408 ------KNNRKGGSWELALDFWAGMSILNFIVAVIFL 438
Cdd:cd17399 383 qcassaSGNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
MFS_1 pfam07690
Major Facilitator Superfamily;
66-357 5.87e-10

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 60.51  E-value: 5.87e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276     66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIASlpslqNFFWrqfLMIIGTSIAAAAQMYFVVFSKIAE 145
Cdd:pfam07690  40 LFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFAS-----SLWL---LLVLRVLQGLGAGALFPAALALIA 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276    146 SWFYPRHRASANVACSNSLELGVVLGTVLPSIIVPASftkdivsSWTF-FLLNSIIAVVCIIPLFLLfvlcrrsVPKTPP 224
Cdd:pfam07690 112 DWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-------GWRAaFLILAILSLLAAVLLLLP-------RPPPES 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276    225 SASSQHESSGPVTSGIFKCLKDRQFLIQIFVYSINFAIANGLIYTSNA-INYRGYNLK--GYPIAIATMVCMFSAYFVGV 301
Cdd:pfam07690 178 KRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLyQEVLGLSALlaGLLLGLGGLLGAIGRLLLGR 257
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 3874276    302 IADRTRKFKLIAIINALVVAVCVLVLRLYLIKTYTGWYDSVIVCTLLSIIMSCCAI 357
Cdd:pfam07690 258 LSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALN 313
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
66-314 3.97e-07

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 51.90  E-value: 3.97e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIA-SLPSLqnFFWRqflMIIGTSIAAAAQMYFVVFSKIA 144
Cdd:COG2814  53 AYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALApSLWLL--LAAR---FLQGLGAGALFPAALALIADLV 127
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  145 EswfyPRHRASANVACSNSLELGVVLGTVLPSIIVpasftkDIVSSWTFFLLNSIIAVVCIIPLFLLfvlcrrsVPKTPP 224
Cdd:COG2814 128 P----PERRGRALGLLGAGLGLGPALGPLLGGLLA------DLFGWRWVFLVNAVLALLALLLLLRL-------LPESRP 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  225 SASSQHESSgpvtsgIFKCLKDRQFLIQIFVYSINFAIANGLIYTSN--AINYRGYNLKGYPIAIATM--VCMFSAYFVG 300
Cdd:COG2814 191 AARARLRGS------LRELLRRPRLLLLLLLAFLLGFGFFALFTYLPlyLQEVLGLSASAAGLLLALFglGGVLGALLAG 264
                       250
                ....*....|....
gi 3874276  301 VIADRTRKFKLIAI 314
Cdd:COG2814 265 RLADRFGRRRLLLI 278
 
Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
15-438 2.84e-144

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340957  Cd Length: 419  Bit Score: 418.98  E-value: 2.84e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   15 ERWFILLATTALICSNIMQWVSFSAQIDQTNMFFcgpneYKNCSAAFLSNQIYQIVAVIVSIIGMYFATVFGTLPTLRLS 94
Cdd:cd17399   1 RRWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILG 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   95 AVFNIVGAAIRLIASLPSLQNFFWRQFLMIIGTSIAAAAQMYFVVFSKIAESWFYPRHRASANVACSNSLELGVVLGTVL 174
Cdd:cd17399  76 AWLNFIGAVIRVISSLPFVDPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  175 PSIIVPASFtkdivsswTFFLLNSIIAVVCIIPLFLLFVLCRRSVPKTPPSASSQHESSgPVTSGIFKCLKDRQFLIQIF 254
Cdd:cd17399 156 SPLIVKSSE--------DIFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILML 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  255 VYSINFAIANGLIYTSNAINY---RGYNLKGYPIAIATMVCMFSAYFVGVIADRTRKFKLIAIInALVVAVCVLVLRLYL 331
Cdd:cd17399 227 CFGGGIGLFNALSTLLEQILCpsgYSNNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIEVTKV-CFCLAVIFLVAFLVV 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  332 IKTytgWYDSVIVCTLLSIIMSCCAIHTPIGNEMGVETTYPVQESISTGVLNTFGQAWLFCLYFIMYSLQESNWVY---- 407
Cdd:cd17399 306 SRF---PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLSVYdlpi 382
                       410       420       430
                ....*....|....*....|....*....|....*..
gi 3874276  408 ------KNNRKGGSWELALDFWAGMSILNFIVAVIFL 438
Cdd:cd17399 383 qcassaSGNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
MFS_FLVCR_like cd17398
Feline leukemia virus subgroup C receptor subfamily of the Major Facilitator Superfamily of ...
15-397 8.85e-27

Feline leukemia virus subgroup C receptor subfamily of the Major Facilitator Superfamily of transporters; The Feline leukemia virus subgroup C receptor (FLVCR) subfamily is conserved in metazoans and is composed of two vertebrate members, FLVCR1 and FLVCR2. FLVCR1 is a heme transporter and it has two isoforms: 1 (or FLVCR1a), which exports cytoplasmic heme as well as coproporphyrin and protoporphyrin IX; and 2 (FLVCR1b), which promotes heme efflux from the mitochondrion to the cytoplasm. FLVCR2 functions as a heme importer as well as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. The FLVCR subfamily belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340956 [Multi-domain]  Cd Length: 406  Bit Score: 111.56  E-value: 8.85e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   15 ERWFILLATTALICSNIMQWVSFSAQIDQTNMFFCGPNEYKNCSAaflsnQIYQIVAVIVSIIGMYFATVFGTLPTLRLS 94
Cdd:cd17398   1 RRWIMLFLFCLYSMSNAFQWIQYAIISNIIVDYYGVSDTAVDWTS-----MIYMLTYIPLIFPATWLLEKYGLRVTVLLG 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   95 AVFNIVGAAIRLIASLPSLqnfFWrqfLMIIGTSIAAAAQMY-FVVFSKIAESWFYPRHRASAnvaCSNSL---ELGVVL 170
Cdd:cd17398  76 SFLNCLGAWLKLFSSSPDL---FW---VAMAGQTICALAQVFiLGIPPRLAAVWFGPDEVSTA---TAIGVfgnQLGVAL 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  171 GTVLPSIIVPASFTKDIVSSwTFFLLNSIIAVVCIIpLFLLFVLCRRSVPKTPPSAS-----SQHESSGPVTSGIFKCLK 245
Cdd:cd17398 147 GFVLPPLLVPNSENKDEIGK-GLSILFYGVAGICTA-LFILVIIFFKEKPPIPPSRAqaaaqELRSEDQSYLGSLKRLFK 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  246 DRQFLIQIFVYSIN----FAIA---NGLI--YTSNAINYRGYnlkgypIAIATMVC-MFSAYFVGVIADRTRKFKLIAII 315
Cdd:cd17398 225 NKGFLLLLITYGINtgvyYAIStllNQMVleYFPNEEVNAGW------IGLTLVIAgLVGSVVAGIWLDKTKKYKETTII 298
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  316 NALVVAVCvlvlrlYLIKTYTGWYDSVIVCTLLSIIMSCCAIHT-PIGNEMGVETTYPVQESISTGVLNTFGQAWLFCLY 394
Cdd:cd17398 299 VYILSFIG------MVAFTFTLDLGSIWVVFLTAGALGFFMTGYlPVGFEFAAELTYPEPEGTSSGLLNASAQIFGIIFT 372

                ...
gi 3874276  395 FIM 397
Cdd:cd17398 373 LVM 375
MFS_SLC49 cd17334
Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily of transporters; The ...
16-397 1.89e-24

Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily of transporters; The Solute carrier 49 (SLC49) family is composed of four members: feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1); FLVCR2 (SLC49A2); major facilitator superfamily domain-containing protein 7 (MFSD7, SLC49A3); and disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. In addition, FLVCR2 also functions as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. The function of MFSD7 is unknown. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. The SLC49 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340892 [Multi-domain]  Cd Length: 407  Bit Score: 104.79  E-value: 1.89e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   16 RWFILLATTALICSNIMQWVSFSAQIDQTNMFFCGPNEYKNcsaaFLSnQIYQIVAVIVSIIGMYFATVFGTLPTLRLSA 95
Cdd:cd17334   2 RWVVLLLFSLLSFSNAMQWITFSPIADEARTFFDLSASQIN----WLS-LVYPIVYVPGVFAFCWLLDKVGLRIGVLIGA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   96 VFNIVGAAIRLIASLpsLQNFFWrqfLMIIGTSIAAAAQMYFVVF-SKIAESWFYPRHRASANVACSNSLELGVVLGTVL 174
Cdd:cd17334  77 ALNALGSVLKCIPLG--QQPKFA---LLVLGQVLNALAQVLVLSLpPLIAAVWFPPKERTTATAIASLANFLGCAIGFLL 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  175 PSIIVPASfTKDIVSSWTFFLLNSiiAVVCIIPLFLLFVLCRRsvPKTPPS-ASSQHESSGPVTSGIFKCLKD----RQF 249
Cdd:cd17334 152 PPVVVPPP-KGTKKEFGAVFYGEF--GFACLLLALVLALFPPK--PKYPPSaASARQQNSEHVILELQKSISEllrnEPF 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  250 LIQIFVYSINFAIANG------LIYTSNAINYRGYNLKGYPIAIATMVcmfSAYFVGVIADRTRKFKLIAIINALVVAVC 323
Cdd:cd17334 227 VLLAVAFSIMMGVFAGfssvlaQILLPFGVSQTSAGWLGFFGIVAGMV---GGLLLGLFVDRTRMFKLIGLIILALGTVV 303
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 3874276  324 VLVLRlyLIKTYTGWYDSVIVCTLLSIIMSCCAIHT-PIGNEMGVETTYPVQESISTGVLNTFGQAWLFCLYFIM 397
Cdd:cd17334 304 CTFFM--LLVDRYGLPYVTLAFYLLCGLLGFFQNSMvPIMFELAVELTYPVPESVSTGVLTALANLFSFLLMLVF 376
MFS_DIRC2 cd17397
Disrupted in renal carcinoma protein 2 of the Major Facilitator Superfamily of transporters; ...
15-406 4.86e-18

Disrupted in renal carcinoma protein 2 of the Major Facilitator Superfamily of transporters; Disrupted in renal carcinoma protein 2 or disrupted in renal cancer protein 2 (DIRC2), encoded by the SLC49A4 gene, was initially identified as a breakpoint-spanning gene in a chromosomal translocation associated with the development of renal cancer. It is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. DIRC2 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340955 [Multi-domain]  Cd Length: 381  Bit Score: 85.43  E-value: 4.86e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   15 ERWFILLATTALICSNIMQWVSFSAqIDQTNMFFCGpneYKNCSAAFLSNQIYqIVAVIVSIIGMYFATVFGTLPTLRLS 94
Cdd:cd17397   1 RRWYILLVFSLLAFTQGAVWNTWGP-IADSAKPAFG---WSDSDIALLANWGP-IGFVPTFFFMAWLMDVKGLRIAVLSS 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   95 AVFNIVGAAIRLIASLPSlqnffWRQFLMIIGTS-IAAAAQMYFVVFSKIAESWFYPRHRASANVACSNSLELGVVlgtv 173
Cdd:cd17397  76 AFLVAAGTGLRCIPVPNH-----LATWLIHIGQFlNGLAGPVAMAAAPFLSATWFPPNQRATATAIASIFNYLGGA---- 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  174 lpsiivpASFtkdIVSSWTFFLLNSIIAVVciipLFLLFVLCRRSVPKTPP--SASSQHESSGpvtSGIFKCLKDRQFLI 251
Cdd:cd17397 147 -------ASF---LIGPLVLMYLEFGWSAL----IFLAMLIYFPSKPPTPPsvSASTQRLSYK---SGILSLLKNKRFWL 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  252 QIFVYSINFAIANGLIyTSNAINYRGYNLK----GYPIAIATMVCMFSAYFVGVIADR-TRKFKLIAIINALVVAVCVLV 326
Cdd:cd17397 210 IALAYGIPTGVYAGWS-GVLDVNLTPFGVSqveaGWIGFYSTVAGCVGGIIVGRFADRfGGRMKLILLLLFSGATGSFLW 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  327 LRLYLIKTYTGWYDSVIVctllSIIMSCCAIH--TPIGNEMGVETTYPVQESISTGVL----NTFGQAWLFCLYFIMYSL 400
Cdd:cd17397 289 FTLICLKLLPFSTVSLYT----SCILLGVFLNgsVPLFYELAVEAAYPVPEGITSGVLtflnNVFGLVFLLILIIPNIGT 364

                ....*.
gi 3874276  401 QESNWV 406
Cdd:cd17397 365 SWMNWC 370
MFS_FLVCR1 cd17455
Feline leukemia virus subgroup C receptor-related protein 1 of the Major Facilitator ...
16-387 7.99e-11

Feline leukemia virus subgroup C receptor-related protein 1 of the Major Facilitator Superfamily of transporters; Feline leukemia virus subgroup C receptor-related protein 1 (FLVCR1) is also called feline leukemia virus subgroup C receptor (FLVCR). FLVCR1 is a heme transporter and it has two isoforms: 1 (or FLVCR1a), which exports cytoplasmic heme as well as coproporphyrin and protoporphyrin IX; and 2 (FLVCR1b), which promotes heme efflux from the mitochondrion to the cytoplasm. Mutations in the FLVCR1 gene have been linked to vision impairment, posterior column ataxia, and sensory neurodegeneration with loss of pain perception. FLVCR1 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341013  Cd Length: 407  Bit Score: 63.69  E-value: 7.99e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   16 RWFILLATTALIC-SNIMQWVSFSAQidqTNMFfcgpNEYKNCSAAFLS--NQIYQIVAVIVSIIGMYFATVFGTLPTLR 92
Cdd:cd17455   1 RRFAVLAVFSLYSlVNAFQWIQYSII---TNIF----TEFYGVSSGAIDwlSVVYMVAYVPLIFPATWLLDLKGLRVTAL 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   93 LSAVFNIVGAAIRLIASLPSLqnfFWrqfLMIIGTSIAAAAQMYFVVF-SKIAESWFYPRHRASANVACSNSLELGVVLG 171
Cdd:cd17455  74 LGAGLNCLGAWVKCASVRPDL---FG---VTMLAQVLCSVAQVFILGLpSRIASVWFGPREVSTACAVAVLGNQLGTAIG 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  172 TVLPSIIVPASFTKDIVSSWTFFLLNSIIAVVCIIpLFLLFVLCRRSVPKTPPSASSQHESSGP-----VTSGIFKCLKD 246
Cdd:cd17455 148 FLLPPVLVPNTVDDIDLMGHNISIMFYGTAAVSTL-LFILTIIVFKEKPPLPPSQAQAVLQGIPsedysYKQSIINLFKN 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  247 RQFLIQIFVYSI---NFAIANGLIYTSNAINYRGYNLKGYPIAIATMVC-MFSAYFVGVIADRTRKFKLIAIInalvvaV 322
Cdd:cd17455 227 VPFVLLLISYGImtgTFYSVSTLLNQMIITHYEGEEVNAGRIGLTLVVAgMVGSILCGLWLDYTKTYKQTTLI------V 300
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 3874276  323 CVLVLRLYLIKTYTGWYDSVIVC----TLLSIIMSCcaiHTPIGNEMGVETTYPVQESISTGVLNTFGQ 387
Cdd:cd17455 301 YILSFIGMVVFTFTLDLGYLIVVfvtgGVLGFFMTG---YLPLGFEFAVEITYPESEGTSSGLLNASAQ 366
MFS_FLVCR2 cd17456
Feline leukemia virus subgroup C receptor-related protein 2 of the Major Facilitator ...
16-387 5.19e-10

Feline leukemia virus subgroup C receptor-related protein 2 of the Major Facilitator Superfamily of transporters; Feline leukemia virus subgroup C receptor-related protein 2 (FLVCR2) is also called calcium-chelate transporter (CCT). It functions as a heme importer as well as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. Mutations in the FLVCR2 gene cause Proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (PVHH), also known as Fowler syndrome, a rare autosomal recessive disorder characterized by glomerular vasculopathy in the central nervous system, severe hydrocephaly, hypokinesia and arthrogryphosis. FLVCR2 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341014  Cd Length: 406  Bit Score: 60.95  E-value: 5.19e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   16 RWFILLATTALICSNIMQWVSFSAqIDQTNMFFCGPNEYkncSAAFLSnQIYQIVAVIVSIIGMYFATVFGTLPTLRLSA 95
Cdd:cd17456   2 RWVIVLLFSSYSLCNAFQWIQYGI-INNIFMHFYGVSSF---AIDWLS-MSYMLTYIPLIFPVAWLLDKRGLRVIALVGS 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   96 VFNIVGAAIRLIASLPSLQNffwrqfLMIIGTSIAAAAQMYFV-VFSKIAESWFYPRHrasANVACSNSL---ELGVVLG 171
Cdd:cd17456  77 ALNCLGAWIKTGSARPDLFP------VTVLGQLVCSVAQVFILgMPSRIASVWFGSSE---VSTACSIGVfgnQLGVAIG 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  172 TVLPSIIVPASFTKDIVSSWTFFLLNSIIAVVCIipLFLLFVLCRRSVPKTPPSASSQHESSGPV-----TSGIFKCLKD 246
Cdd:cd17456 148 FLLPPVLVPNIDDLDELAYHISIMFYGTAAVATL--LFILVIIVFQEKPKIPPSQAQAAIQSIPSqdysyLQSILRLLKN 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  247 RQFLIQIFVYSIN---FAIANGLIYTSNAINYRGYNLK----GYPIAIATMVcmfSAYFVGVIADRTRKFKLIAIInALV 319
Cdd:cd17456 226 VNFILLVVSYGLNtgcFYALSTLLNRMVIFHYPGEEVNagriGLTIVVAGMV---GALISGIWLDRTKTYKQTTLA-VYI 301
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3874276  320 VAVCVLVLRLYLIKTYTGWYdSVIVCTLLSIIMSCcaiHTPIGNEMGVETTYPVQESISTGVLNTFGQ 387
Cdd:cd17456 302 MSLVGMVVYTFTLNLGHLWV-VFITAGTLGFFMTG---YLPLGFEFAAELTYPESEGTSSGLLNVSAQ 365
MFS_1 pfam07690
Major Facilitator Superfamily;
66-357 5.87e-10

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 60.51  E-value: 5.87e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276     66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIASlpslqNFFWrqfLMIIGTSIAAAAQMYFVVFSKIAE 145
Cdd:pfam07690  40 LFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFAS-----SLWL---LLVLRVLQGLGAGALFPAALALIA 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276    146 SWFYPRHRASANVACSNSLELGVVLGTVLPSIIVPASftkdivsSWTF-FLLNSIIAVVCIIPLFLLfvlcrrsVPKTPP 224
Cdd:pfam07690 112 DWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-------GWRAaFLILAILSLLAAVLLLLP-------RPPPES 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276    225 SASSQHESSGPVTSGIFKCLKDRQFLIQIFVYSINFAIANGLIYTSNA-INYRGYNLK--GYPIAIATMVCMFSAYFVGV 301
Cdd:pfam07690 178 KRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLyQEVLGLSALlaGLLLGLGGLLGAIGRLLLGR 257
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 3874276    302 IADRTRKFKLIAIINALVVAVCVLVLRLYLIKTYTGWYDSVIVCTLLSIIMSCCAI 357
Cdd:pfam07690 258 LSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALN 313
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
66-314 3.97e-07

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 51.90  E-value: 3.97e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIA-SLPSLqnFFWRqflMIIGTSIAAAAQMYFVVFSKIA 144
Cdd:COG2814  53 AYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALApSLWLL--LAAR---FLQGLGAGALFPAALALIADLV 127
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  145 EswfyPRHRASANVACSNSLELGVVLGTVLPSIIVpasftkDIVSSWTFFLLNSIIAVVCIIPLFLLfvlcrrsVPKTPP 224
Cdd:COG2814 128 P----PERRGRALGLLGAGLGLGPALGPLLGGLLA------DLFGWRWVFLVNAVLALLALLLLLRL-------LPESRP 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  225 SASSQHESSgpvtsgIFKCLKDRQFLIQIFVYSINFAIANGLIYTSN--AINYRGYNLKGYPIAIATM--VCMFSAYFVG 300
Cdd:COG2814 191 AARARLRGS------LRELLRRPRLLLLLLLAFLLGFGFFALFTYLPlyLQEVLGLSASAAGLLLALFglGGVLGALLAG 264
                       250
                ....*....|....
gi 3874276  301 VIADRTRKFKLIAI 314
Cdd:COG2814 265 RLADRFGRRRLLLI 278
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
66-388 4.01e-07

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 52.04  E-value: 4.01e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIASLPSLqnffwrqfLMIIGTSIAAAAQMYFVVFSKIAE 145
Cdd:cd06174  39 LFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWL--------LLLGRFLLGLGSGLIDPAVLALIA 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  146 SWFYPRHRASAnvacSNSLELGVVLGTVLPSIIVPASFTKDIVSSWTFFLLNSIIAVVCIIPLFLLFVLcrrsvPKTPPS 225
Cdd:cd06174 111 DLFPERERGRA----LGLLQAFGSVGGILGPLLGGILASSLGFGWRAVFLIAAALALLAAILLLLVVPD-----PPESAR 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  226 ASSQHESSGPVTSGIFKCLKDRQFLIQIFVYSINFAIANGLI--YTSNAINYRGYNLKGYPIAIATMVC--MFSAYFVGV 301
Cdd:cd06174 182 AKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFStlLPLFLLDLGGLSVAVAGLLLSLFGLagALGSLLLGL 261
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  302 IADRTRKFKLIAIINALVVAVCVlvlrlylikTYTGWYDSVIVCTLLSIIMSCC-AIHTPIGNEMGVETTYPVQESISTG 380
Cdd:cd06174 262 LSDRLIGRKPLLLIGLLLMALGL---------ALLLLAPSLLLLLLLLLLLGFGlGGLLPLSFALIAELFPPEIRGTAFG 332

                ....*...
gi 3874276  381 VLNTFGQA 388
Cdd:cd06174 333 LLNTFGFL 340
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
16-315 4.73e-06

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 48.72  E-value: 4.73e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   16 RWFILLATTALICSNIMQWVSFSAQIDQTNMFFcgpneykNCSAA--FLSNQIYQIVAVIVSIIGMYFATVFGTLPTLRL 93
Cdd:COG2223   3 RWRVLLLATLAFFLAFGVWYLWSVLAPPLAEEF-------GLSAAqlGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLI 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   94 SAVFNIVGAAirLIASLPSLQNFFWRQFLMIIGTSIAAAAQMYFVVFskiaesWFYPRHRASA---NVACSNslelgvvL 170
Cdd:COG2223  76 GLLLLGIGLL--LLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSK------WFPPDRRGLAlglAAGGGN-------L 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  171 GTVLPSIIVPASFTkdiVSSWTffllnsIIAVVCIIPLFLLFVLCRRSVPKTPPSASSQHESSgpvTSGIFKCLKDRQFL 250
Cdd:COG2223 141 GAAVAAFLAPLLIA---AFGWR------NAFLILGILLLVVAVLAWLFLRDPPAGAAAAAKAS---LRDQLEALRDPRFW 208
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3874276  251 IQIFVYSINFAIanGLIYTSNAINY----RGYNLK--GYPIAIATMVCMFSAYFVGVIADRTRKFKLIAII 315
Cdd:COG2223 209 LLSLLYFGTFGS--FIGFSSWLPPYlvdqFGLSAAtaGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIV 277
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
166-314 4.17e-04

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 42.58  E-value: 4.17e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  166 LGVVLGTVLPSIIVPAsFTKDIVSSWTFFLLnsIIAVVCIIPLFLLFVLCRRSVPKTppsassqhESSGPVTSGIFKCLK 245
Cdd:COG2211 158 LGGLLASVLPPPLVAA-FGGDAALGYRLTAL--IFAVLGLLAFLLTFFGTKERPVPE--------EEKVSLKESLKALLK 226
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 3874276  246 DRQFLIQIFVYSINFaIANGLIYTSnAINYRGYNLK------GYPIAIATMVCMFSAYFVGVIADRTRKFKLIAI 314
Cdd:COG2211 227 NRPFLLLLLAYLLFF-LALALVAAL-LLYYFKYVLGlsaalvGLLLALYFLAALLGAPLWPRLAKRFGKKKAFII 299
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
66-353 1.07e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 41.06  E-value: 1.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   66 IYQIVAVIVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIASLPslqnffWRQFLMIIGTSIAAAaqMYF-VVFSKIA 144
Cdd:cd17329  43 LSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSP------WLFAIALVLTGFGGG--LFEpASEAMIA 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  145 ESWfYPRHRASANVACSNSLELGVVLGTVLPSIIVPASFTkdivsswTFFLLNSIIAVVCIIPLFLLFvlcrrsvPKTPP 224
Cdd:cd17329 115 DVT-TPENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSFR-------LLFLAAAVLFLLAALVLLFLL-------PETRP 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  225 SASSQHESSGPVTSGIFkcLKDRQFLIQIFVYSINFAIANGL-----IYTSNAINYrGYNLKGYPIAIATMVcmfSAYFV 299
Cdd:cd17329 180 KRRAAEKTEILRGYKIV--LRDRAFLLFLLASFLISLIYFQLestlpVYVVEILGL-GESLLGLLLALNALL---IVLLQ 253
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 3874276  300 GVIADRTRKFKLIAIINALVVAVCVLVLRLYLIKTYTGWYDSVIVCTLLSIIMS 353
Cdd:cd17329 254 FPVARLVERFRLRKILMIGILLFAIGFAVLAFANTLAVLILAMIVLTLGEMLVF 307
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
73-315 1.86e-03

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 40.63  E-value: 1.86e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276   73 IVSIIGMYFATVFGTLPTLRLSAVFNIVGAAIRLIA-SLPSLqnFFWRqflMIIGTSIAAAaqmyFVVFSKIAESWFyPR 151
Cdd:COG2807  68 LFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLApSVALL--LAGT---ALIGAGIAVG----NVLLPGLIKRWF-PD 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  152 HRASANVACSNSLELGVVLGtvlPSIIVPASftkdIVSSWTFFLLnsIIAVVCIIPLFLLFVLCRRSvPKTPPSASSQHE 231
Cdd:COG2807 138 RVGLMTGLYTAAMGLGAALA---AGLTVPLA----AALGWRGALA--VWALLALLALLLWLPLLRRR-PAAAAAAPAAAS 207
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3874276  232 SSGPVTSGIFkclkdRQFLIQIFVYSINFAIANGL---IYTSnainyRGYNLK--GYPIAIATMVCMFSAYFVGVIADRT 306
Cdd:COG2807 208 LRSLWRSPLA-----WLLTLFFGLQSLLYYAVVAWlppILRD-----AGLSAAtaGLLLSLFQLAGIPGSLLVPLLADRL 277

                ....*....
gi 3874276  307 RKFKLIAII 315
Cdd:COG2807 278 GDRRPLLLL 286
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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