NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|21439326|emb|CAD35050|]
View 

unnamed protein product [Homo sapiens]

Protein Classification

oxidative stress-responsive serine-rich protein 1( domain architecture ID 10528895)

oxidative stress-responsive serine-rich protein 1 (OSER1) is a DUF776 domain-containing protein which may be involved in the formation/maintenance of nuclear speckles and/or in RNA processing

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF776 pfam05604
Protein of unknown function (DUF776); This family consists of several highly related mouse and ...
 1-180 5.84e-106

Protein of unknown function (DUF776); This family consists of several highly related mouse and human proteins of unknown function.


:

Pssm-ID: 428538  Cd Length: 182  Bit Score: 305.67  E-value: 5.84e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326     1 MKSEAKDGEEESLQTAFKKLRVDASGSVASLSVGEGTGVRAPVRTATDDTKPKTTCASKDSWHGSTRKSSRGAVRTQRRR 80
Cdd:pfam05604   1 MKSEAKDGEEESLQTAFKKLRVDAEGSIASLSVGEGTSVRASVRTAPDGAKPKTACASKDSWHGSTRKSSRGAVRTQRRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326    81 RSKSPVLHPPKFIHCSTIASSSSSQLKHKSQTDSPDGSSGLGISSPKEFSAGESSTSLDA-NHTGAVVEPLRTSVPRLPS 159
Cdd:pfam05604  81 RSKSPVLHPPKFIHCSTKASPSSSQLKHKSQTEPPDGSSGLGISTPKEFSAGESSSSLGAvNHTGAVVEPLGTSVPRLPS 160

                         170       180
                  ....*....|....*....|..
gi 21439326   160 ESK-KEDSSDATQVPQASLKAS 180
Cdd:pfam05604 161 ESKdKEDAPDATQVSQASLKAN 182
 
Name Accession Description Interval E-value
DUF776 pfam05604
Protein of unknown function (DUF776); This family consists of several highly related mouse and ...
 1-180 5.84e-106

Protein of unknown function (DUF776); This family consists of several highly related mouse and human proteins of unknown function.


Pssm-ID: 428538  Cd Length: 182  Bit Score: 305.67  E-value: 5.84e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326     1 MKSEAKDGEEESLQTAFKKLRVDASGSVASLSVGEGTGVRAPVRTATDDTKPKTTCASKDSWHGSTRKSSRGAVRTQRRR 80
Cdd:pfam05604   1 MKSEAKDGEEESLQTAFKKLRVDAEGSIASLSVGEGTSVRASVRTAPDGAKPKTACASKDSWHGSTRKSSRGAVRTQRRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326    81 RSKSPVLHPPKFIHCSTIASSSSSQLKHKSQTDSPDGSSGLGISSPKEFSAGESSTSLDA-NHTGAVVEPLRTSVPRLPS 159
Cdd:pfam05604  81 RSKSPVLHPPKFIHCSTKASPSSSQLKHKSQTEPPDGSSGLGISTPKEFSAGESSSSLGAvNHTGAVVEPLGTSVPRLPS 160

                         170       180
                  ....*....|....*....|..
gi 21439326   160 ESK-KEDSSDATQVPQASLKAS 180
Cdd:pfam05604 161 ESKdKEDAPDATQVSQASLKAN 182
 
Name Accession Description Interval E-value
DUF776 pfam05604
Protein of unknown function (DUF776); This family consists of several highly related mouse and ...
 1-180 5.84e-106

Protein of unknown function (DUF776); This family consists of several highly related mouse and human proteins of unknown function.


Pssm-ID: 428538  Cd Length: 182  Bit Score: 305.67  E-value: 5.84e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326     1 MKSEAKDGEEESLQTAFKKLRVDASGSVASLSVGEGTGVRAPVRTATDDTKPKTTCASKDSWHGSTRKSSRGAVRTQRRR 80
Cdd:pfam05604   1 MKSEAKDGEEESLQTAFKKLRVDAEGSIASLSVGEGTSVRASVRTAPDGAKPKTACASKDSWHGSTRKSSRGAVRTQRRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21439326    81 RSKSPVLHPPKFIHCSTIASSSSSQLKHKSQTDSPDGSSGLGISSPKEFSAGESSTSLDA-NHTGAVVEPLRTSVPRLPS 159
Cdd:pfam05604  81 RSKSPVLHPPKFIHCSTKASPSSSQLKHKSQTEPPDGSSGLGISTPKEFSAGESSSSLGAvNHTGAVVEPLGTSVPRLPS 160

                         170       180
                  ....*....|....*....|..
gi 21439326   160 ESK-KEDSSDATQVPQASLKAS 180
Cdd:pfam05604 161 ESKdKEDAPDATQVSQASLKAN 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH