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Conserved domains on  [gi|30348693|emb|CAD89998|]
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hypothetical protein, partial [Homo sapiens]

Protein Classification

NEBU and Nebulin domain-containing protein( domain architecture ID 10643564)

NEBU and Nebulin domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1-31 1.18e-06

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 45.92  E-value: 1.18e-06
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693       1 YSSVTDTPQIVQAKINAQQLSHVNYRADYEK 31
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
41-68 7.11e-06

Nebulin repeat;


:

Pssm-ID: 459977  Cd Length: 28  Bit Score: 43.53  E-value: 7.11e-06
                           10        20
                   ....*....|....*....|....*...
gi 30348693     41 DVPQLVKAKTNAKLFSEVKYKEGWEKTK 68
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 240-270 3.54e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.68  E-value: 3.54e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     240 FTSVTDSSQMEHAKKSQELQSGVAYKAGNEQ 270
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 870-900 4.48e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.30  E-value: 4.48e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     870 FHLPMDMVHLVHAKNAQALASDHDYRTQYHK 900
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
559-586 5.36e-05

Nebulin repeat;


:

Pssm-ID: 459977  Cd Length: 28  Bit Score: 41.22  E-value: 5.36e-05
                           10        20
                   ....*....|....*....|....*...
gi 30348693    559 DALPFQAAKASGEIISDYKYKEAFEKMK 586
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 141-171 9.16e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 40.53  E-value: 9.16e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     141 FHLPMDMVNIRHAKKAQTLASDLDYRKKLHE 171
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
77-104 1.16e-04

Nebulin repeat;


:

Pssm-ID: 459977  Cd Length: 28  Bit Score: 40.07  E-value: 1.16e-04
                           10        20
                   ....*....|....*....|....*...
gi 30348693     77 DAMSLLAAKASGELASNIKYKEEYEKTK 104
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 518-548 4.96e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 38.60  E-value: 4.96e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     518 YTPTADLPEVLLAKLNAMNISETRYKESWSK 548
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 275-305 7.80e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 7.80e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     275 YTISKDEPLFLQARANAANLSEKLYKSSWEN 305
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 483-513 8.27e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 8.27e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     483 FTSIKDTPEMVQARISYTQAVDRLYREQGEN 513
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 761-789 5.36e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 35.52  E-value: 5.36e-03
                            10        20
                    ....*....|....*....|....*....
gi 30348693     761 YTMTLGLPEFIRAKTNAANLSDARYKESW 789
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDY 29
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1113-1139 9.57e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


:

Pssm-ID: 128523  Cd Length: 31  Bit Score: 34.75  E-value: 9.57e-03
                            10        20
                    ....*....|....*....|....*..
gi 30348693    1113 FHSSTDQPGLLQAKRSQQLASDVHYRQ 1139
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKE 27
 
Name Accession Description Interval E-value
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1-31 1.18e-06

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 45.92  E-value: 1.18e-06
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693       1 YSSVTDTPQIVQAKINAQQLSHVNYRADYEK 31
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
6-33 2.67e-06

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 44.69  E-value: 2.67e-06
                           10        20
                   ....*....|....*....|....*...
gi 30348693      6 DTPQIVQAKINAQQLSHVNYRADYEKNK 33
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
Nebulin pfam00880
Nebulin repeat;
41-68 7.11e-06

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 43.53  E-value: 7.11e-06
                           10        20
                   ....*....|....*....|....*...
gi 30348693     41 DVPQLVKAKTNAKLFSEVKYKEGWEKTK 68
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 36-66 1.87e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 42.45  E-value: 1.87e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693      36 YTLPQDVPQLVKAKTNAKLFSEVKYKEGWEK 66
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 240-270 3.54e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.68  E-value: 3.54e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     240 FTSVTDSSQMEHAKKSQELQSGVAYKAGNEQ 270
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 870-900 4.48e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.30  E-value: 4.48e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     870 FHLPMDMVHLVHAKNAQALASDHDYRTQYHK 900
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
559-586 5.36e-05

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 41.22  E-value: 5.36e-05
                           10        20
                   ....*....|....*....|....*...
gi 30348693    559 DALPFQAAKASGEIISDYKYKEAFEKMK 586
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 141-171 9.16e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 40.53  E-value: 9.16e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     141 FHLPMDMVNIRHAKKAQTLASDLDYRKKLHE 171
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
77-104 1.16e-04

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 40.07  E-value: 1.16e-04
                           10        20
                   ....*....|....*....|....*...
gi 30348693     77 DAMSLLAAKASGELASNIKYKEEYEKTK 104
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 518-548 4.96e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 38.60  E-value: 4.96e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     518 YTPTADLPEVLLAKLNAMNISETRYKESWSK 548
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 275-305 7.80e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 7.80e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     275 YTISKDEPLFLQARANAANLSEKLYKSSWEN 305
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 483-513 8.27e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 8.27e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     483 FTSIKDTPEMVQARISYTQAVDRLYREQGEN 513
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 554-584 1.14e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.45  E-value: 1.14e-03
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     554 YKLRLDALPFQAAKASGEIISDYKYKEAFEK 584
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 72-102 1.26e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.45  E-value: 1.26e-03
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693      72 FEMKLDAMSLLAAKASGELASNIKYKEEYEK 102
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 761-789 5.36e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 35.52  E-value: 5.36e-03
                            10        20
                    ....*....|....*....|....*....
gi 30348693     761 YTMTLGLPEFIRAKTNAANLSDARYKESW 789
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDY 29
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1113-1139 9.57e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 34.75  E-value: 9.57e-03
                            10        20
                    ....*....|....*....|....*..
gi 30348693    1113 FHSSTDQPGLLQAKRSQQLASDVHYRQ 1139
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKE 27
 
Name Accession Description Interval E-value
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1-31 1.18e-06

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 45.92  E-value: 1.18e-06
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693       1 YSSVTDTPQIVQAKINAQQLSHVNYRADYEK 31
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
6-33 2.67e-06

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 44.69  E-value: 2.67e-06
                           10        20
                   ....*....|....*....|....*...
gi 30348693      6 DTPQIVQAKINAQQLSHVNYRADYEKNK 33
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
Nebulin pfam00880
Nebulin repeat;
41-68 7.11e-06

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 43.53  E-value: 7.11e-06
                           10        20
                   ....*....|....*....|....*...
gi 30348693     41 DVPQLVKAKTNAKLFSEVKYKEGWEKTK 68
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 36-66 1.87e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 42.45  E-value: 1.87e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693      36 YTLPQDVPQLVKAKTNAKLFSEVKYKEGWEK 66
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 240-270 3.54e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.68  E-value: 3.54e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     240 FTSVTDSSQMEHAKKSQELQSGVAYKAGNEQ 270
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 870-900 4.48e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 41.30  E-value: 4.48e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     870 FHLPMDMVHLVHAKNAQALASDHDYRTQYHK 900
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
559-586 5.36e-05

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 41.22  E-value: 5.36e-05
                           10        20
                   ....*....|....*....|....*...
gi 30348693    559 DALPFQAAKASGEIISDYKYKEAFEKMK 586
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 141-171 9.16e-05

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 40.53  E-value: 9.16e-05
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     141 FHLPMDMVNIRHAKKAQTLASDLDYRKKLHE 171
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
Nebulin pfam00880
Nebulin repeat;
77-104 1.16e-04

Nebulin repeat;


Pssm-ID: 459977  Cd Length: 28  Bit Score: 40.07  E-value: 1.16e-04
                           10        20
                   ....*....|....*....|....*...
gi 30348693     77 DAMSLLAAKASGELASNIKYKEEYEKTK 104
Cdd:pfam00880    1 DTPEIVHAKKNAKLQSDVKYKEDYEKEK 28
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 518-548 4.96e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 38.60  E-value: 4.96e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     518 YTPTADLPEVLLAKLNAMNISETRYKESWSK 548
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 275-305 7.80e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 7.80e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     275 YTISKDEPLFLQARANAANLSEKLYKSSWEN 305
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 483-513 8.27e-04

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.83  E-value: 8.27e-04
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     483 FTSIKDTPEMVQARISYTQAVDRLYREQGEN 513
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 554-584 1.14e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.45  E-value: 1.14e-03
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693     554 YKLRLDALPFQAAKASGEIISDYKYKEAFEK 584
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 72-102 1.26e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 37.45  E-value: 1.26e-03
                            10        20        30
                    ....*....|....*....|....*....|.
gi 30348693      72 FEMKLDAMSLLAAKASGELASNIKYKEEYEK 102
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDYEK 31
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 761-789 5.36e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 35.52  E-value: 5.36e-03
                            10        20
                    ....*....|....*....|....*....
gi 30348693     761 YTMTLGLPEFIRAKTNAANLSDARYKESW 789
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKEDY 29
NEBU smart00227
The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind ...
 1113-1139 9.57e-03

The Nebulin repeat is present also in Las1; Tandem arrays of these repeats are known to bind actin.


Pssm-ID: 128523  Cd Length: 31  Bit Score: 34.75  E-value: 9.57e-03
                            10        20
                    ....*....|....*....|....*..
gi 30348693    1113 FHSSTDQPGLLQAKRSQQLASDVHYRQ 1139
Cdd:smart00227    1 YTSVPDTPEILLAKKNQKLISDVKYKE 27
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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