NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|57997182|emb|CAI46191|]
View 

hypothetical protein [Homo sapiens]

Protein Classification

flavin-binding monooxygenase-like family protein( domain architecture ID 1000557)

flavin-binding monooxygenase-like family protein; such as flavin-containing monooxygenases (FMOs) that catalyze the monooxygenation of a variety of substrates

EC:  1.14.13.-
Gene Ontology:  GO:0004497

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
FMO-like super family cl30939
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 2-471 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


The actual alignment was detected with superfamily member pfam00743:

Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 946.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182     2 AKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVTNTSKEMSCFSDLPMPEDFPNF 81
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    82 LHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFP 161
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   162 GMERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISEDGYPWDSVFHTRFRS 241
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   242 MLRNVLPRTAVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKSTVKELTETSAIFEDGTVEEN 321
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   322 IDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLDKSTLACIGLIQPLGSIFPTAELQARWVTRVFKGLCSLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESLVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   402 ERTMMMDIIKRNEKRIDLFGESQSQTLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLYFGPCNSY 471
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPY 470
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 2-471 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 946.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182     2 AKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVTNTSKEMSCFSDLPMPEDFPNF 81
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    82 LHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFP 161
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   162 GMERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISEDGYPWDSVFHTRFRS 241
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   242 MLRNVLPRTAVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKSTVKELTETSAIFEDGTVEEN 321
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   322 IDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLDKSTLACIGLIQPLGSIFPTAELQARWVTRVFKGLCSLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESLVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   402 ERTMMMDIIKRNEKRIDLFGESQSQTLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLYFGPCNSY 471
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPY 470
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-396 8.57e-91

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 282.14  E-value: 8.57e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   5 VAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRfkenveDGRasiYQSVVTNTSKEMSCFSDLPMPEDFPNFLHN 84
Cdd:COG2072   9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWR------DNR---YPGLRLDTPSHLYSLPFFPNWSDDPDFPTG 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  85 SKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDfssSGQWKVVTqSNGKEQSAvfDAVMVCSGHHILPHIPlkSFPGME 164
Cdd:COG2072  80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTT-DDGETLTA--RFVVVATGPLSRPKIP--DIPGLE 151

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182 165 RFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRisEDGYPWDSVFHTRFRSMLR 244
Cdd:COG2072 152 DFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR--PNYDPERGRPANYLGLEAP 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182 245 NVLPRTAVKWMIEQQMNRWFNHENYG-LEPQNKYIMKEPVLNDDVPSRLLCGAIK-VKSTVKELTETSAIFEDGTVEEnI 322
Cdd:COG2072 230 PALNRRDARAWLRRLLRAQVKDPELGlLTPDYPPGCKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGTEHE-V 308

                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 57997182 323 DVIIFATGYSFSFPFLEDSLVKVEN--NMVSLYKYIFPAHLDksTLACIGLIQPLG--SIFPTAELQARWVTRVFKGL 396
Cdd:COG2072 309 DVIVWATGFRADLPWLAPLDVRGRDgrSGPRAYLGVVVPGFP--NLFFLGPNSPSGhsSLTLGAERQARYIARLIAHM 384
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 2-447 9.78e-50

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 176.21  E-value: 9.78e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    2 AKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDG-----------RASIYQSVVTNTSKEMSCFS 70
Cdd:PLN02172  10 SQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYR 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   71 DLPM----------PEDFPNflhNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRkcpdfSSSGQWKVVTQ-SNGKEQSAV 139
Cdd:PLN02172  90 DFPFvprfddesrdSRRYPS---HREVLAYLQDFAREFKIEEMVRFETEVVRVE-----PVDGKWRVQSKnSGGFSKDEI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  140 FDAVMVCSGHHILPHIplKSFPGMERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFIStrhgtw 219
Cdd:PLN02172 162 FDAVVVCNGHYTEPNV--AHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIA------ 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  220 vmSRISEdgypwdsvfhtrfrsmlrnvlPRTAVKWMIEQQmNRWFNHEnyglepqnkyimkepvlnddvpsrllcgaikv 299
Cdd:PLN02172 234 --SRASE---------------------SDTYEKLPVPQN-NLWMHSE-------------------------------- 257

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  300 KSTVKEltETSAIFEDGTVEEnIDVIIFATGYSFSFPFLE-DSLVKVENNMVS-LYKYIFPAHLDKStLACIGLiQPLGS 377
Cdd:PLN02172 258 IDTAHE--DGSIVFKNGKVVY-ADTIVHCTGYKYHFPFLEtNGYMRIDENRVEpLYKHVFPPALAPG-LSFIGL-PAMGI 332

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 57997182  378 IFPTAELQARWVTRVFKGLCSLPSERTMMMDIIKRNEKRiDLFG--ESQSQTLQTNYVDYLDELALEIGAKP 447
Cdd:PLN02172 333 QFVMFEIQSKWVAAVLSGRVTLPSEDKMMEDINAWYASL-EALGipKRYTHKLGKIQSEYLNWIAEECGCPL 403
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 2-471 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 946.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182     2 AKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVTNTSKEMSCFSDLPMPEDFPNF 81
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    82 LHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFP 161
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   162 GMERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISEDGYPWDSVFHTRFRS 241
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   242 MLRNVLPRTAVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKSTVKELTETSAIFEDGTVEEN 321
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   322 IDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLDKSTLACIGLIQPLGSIFPTAELQARWVTRVFKGLCSLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESLVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   402 ERTMMMDIIKRNEKRIDLFGESQSQTLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLYFGPCNSY 471
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGDSQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPY 470
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-396 8.57e-91

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 282.14  E-value: 8.57e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   5 VAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRfkenveDGRasiYQSVVTNTSKEMSCFSDLPMPEDFPNFLHN 84
Cdd:COG2072   9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWR------DNR---YPGLRLDTPSHLYSLPFFPNWSDDPDFPTG 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  85 SKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDfssSGQWKVVTqSNGKEQSAvfDAVMVCSGHHILPHIPlkSFPGME 164
Cdd:COG2072  80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTT-DDGETLTA--RFVVVATGPLSRPKIP--DIPGLE 151

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182 165 RFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRisEDGYPWDSVFHTRFRSMLR 244
Cdd:COG2072 152 DFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR--PNYDPERGRPANYLGLEAP 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182 245 NVLPRTAVKWMIEQQMNRWFNHENYG-LEPQNKYIMKEPVLNDDVPSRLLCGAIK-VKSTVKELTETSAIFEDGTVEEnI 322
Cdd:COG2072 230 PALNRRDARAWLRRLLRAQVKDPELGlLTPDYPPGCKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGTEHE-V 308

                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 57997182 323 DVIIFATGYSFSFPFLEDSLVKVEN--NMVSLYKYIFPAHLDksTLACIGLIQPLG--SIFPTAELQARWVTRVFKGL 396
Cdd:COG2072 309 DVIVWATGFRADLPWLAPLDVRGRDgrSGPRAYLGVVVPGFP--NLFFLGPNSPSGhsSLTLGAERQARYIARLIAHM 384
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 2-447 9.78e-50

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 176.21  E-value: 9.78e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    2 AKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDG-----------RASIYQSVVTNTSKEMSCFS 70
Cdd:PLN02172  10 SQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYR 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   71 DLPM----------PEDFPNflhNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRkcpdfSSSGQWKVVTQ-SNGKEQSAV 139
Cdd:PLN02172  90 DFPFvprfddesrdSRRYPS---HREVLAYLQDFAREFKIEEMVRFETEVVRVE-----PVDGKWRVQSKnSGGFSKDEI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  140 FDAVMVCSGHHILPHIplKSFPGMERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFIStrhgtw 219
Cdd:PLN02172 162 FDAVVVCNGHYTEPNV--AHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIA------ 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  220 vmSRISEdgypwdsvfhtrfrsmlrnvlPRTAVKWMIEQQmNRWFNHEnyglepqnkyimkepvlnddvpsrllcgaikv 299
Cdd:PLN02172 234 --SRASE---------------------SDTYEKLPVPQN-NLWMHSE-------------------------------- 257

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  300 KSTVKEltETSAIFEDGTVEEnIDVIIFATGYSFSFPFLE-DSLVKVENNMVS-LYKYIFPAHLDKStLACIGLiQPLGS 377
Cdd:PLN02172 258 IDTAHE--DGSIVFKNGKVVY-ADTIVHCTGYKYHFPFLEtNGYMRIDENRVEpLYKHVFPPALAPG-LSFIGL-PAMGI 332

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 57997182  378 IFPTAELQARWVTRVFKGLCSLPSERTMMMDIIKRNEKRiDLFG--ESQSQTLQTNYVDYLDELALEIGAKP 447
Cdd:PLN02172 333 QFVMFEIQSKWVAAVLSGRVTLPSEDKMMEDINAWYASL-EALGipKRYTHKLGKIQSEYLNWIAEECGCPL 403
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
88-353 3.85e-17

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 81.89  E-value: 3.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    88 LEYFRIFAKKFDLLkyIQFQTTVLSVRKcpdfssSGQWKVVTQSNGKEQSavfDAVMVCSGHHILPHIPLKSFPGMerfk 167
Cdd:pfam13738  78 AEYLRRVADHFELP--INLFEEVTSVKK------EDDGFVVTTSKGTYQA---RYVIIATGEFDFPNKLGVPELPK---- 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   168 gqyfHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWvmsrisedgypwdsvfhtrfrsmlrnvl 247
Cdd:pfam13738 143 ----HYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEW---------------------------- 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   248 prtavkwmieqqmNRWFNHENYGLEPQNKYIMKEPVLNddvpsrllcGAIKV--KSTVKELTETSAI----FEDGTVEEN 321
Cdd:pfam13738 191 -------------EDRDSDPSYSLSPDTLNRLEELVKN---------GKIKAhfNAEVKEITEVDVSykvhTEDGRKVTS 248

                         250       260       270
                  ....*....|....*....|....*....|..
gi 57997182   322 IDVIIFATGYSFSFPFLEDSLVKVENNMVSLY 353
Cdd:pfam13738 249 NDDPILATGYHPDLSFLKKGLFELDEDGRPVL 280
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
 78-333 2.94e-08

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 55.28  E-value: 2.94e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    78 FPNFLHNSKLL------EYFRIFAKKFD---------LLKYIQFQTTVLSVRkcPDFSSSGQWKVVTQSNGKEQSAVFDA 142
Cdd:pfam13434  71 FLNYLHEHGRLysfynlETFFPSRREFNdylqwaashLPNRLRFGQEVESVE--PDAERGEPLLRVRVRDADGEETTFLA 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   143 VMVCSGHHILPHIPlKSFPGMERFkgqyFHSRQY--KHPDGFEGKRILVIGMGNSGSDIAVEL--SKNAAQVfistrhgT 218
Cdd:pfam13434 149 RNLVLGTGGEPYIP-ECARGGERV----FHSSEYleRIDRLAAKKRIAVVGSGQSAAEIFRDLlrRGPAYEL-------T 216

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   219 WVMSRISEdgYPWDSV----------FHTRFRSmlrnvLPRTAvkwmiEQQMNRWFNHENY-GLEPQ--NK-----YIMK 280
Cdd:pfam13434 217 WVTRSPNF--FPLDDSpfvneifspeYVDYFYS-----LPEDT-----RRALLREQKGTNYdGIDPSliEEiyrllYEQR 284

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 57997182   281 epvLNDDVPSRLL-----CGAIKVKSTVKELTeTSAIFEDGTVEENIDVIIFATGYSF 333
Cdd:pfam13434 285 ---VDGDPRHRLLpnrevQSAERVGDGGVELT-LRDGEQGREETLETDVVVLATGYRR 338
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
4-215 1.06e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 50.12  E-value: 1.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182   4 KVAVIGAGVSGL---ISLKccvDEGLEPTCFERTEdIGGvwrfkenvedgrasiyQsvVTNTSkemscfsdlpMPEDFPN 80
Cdd:COG0492   2 DVVIIGAGPAGLtaaIYAA---RAGLKTLVIEGGE-PGG----------------Q--LATTK----------EIENYPG 49

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182  81 FLHN---SKLLEYFRIFAKKFDllkyIQFQTT-VLSVRKcpdfssSGQWKVVTQSNGKEQSAvfDAVMVCSGhhiLPHIP 156
Cdd:COG0492  50 FPEGisgPELAERLREQAERFG----AEILLEeVTSVDK------DDGPFRVTTDDGTEYEA--KAVIIATG---AGPRK 114

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 57997182 157 LKsFPGMERFKGQ---YFhsrqyKHPDG--FEGKRILVIGMGNSGSDIAVELSKNAAQVFISTR 215
Cdd:COG0492 115 LG-LPGEEEFEGRgvsYC-----ATCDGffFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHR 172
NAD_binding_9 pfam13454
FAD-NAD(P)-binding;
6-149 1.70e-03

FAD-NAD(P)-binding;


Pssm-ID: 433222 [Multi-domain]  Cd Length: 155  Bit Score: 38.80  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182     6 AVIGAGVSGLIS----LKCCVDEGLEPTCFERTED-IGGVWRfKENVEDGRasiyqsvvTNT-SKEMSCFSDLpmPEDFP 79
Cdd:pfam13454   1 AIVGGGPSGLALlerlLARAPKRPLEITLFDPSPPgAGGVYR-TDQSPEHL--------LNVpASRMSLFPDD--PPHFL 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57997182    80 NFLHNSKLLEYF-----RIFAKKFDLLKYIQFQ------------------TTVLSVRKCPDfsssGQWkvVTQSNGkeQ 136
Cdd:pfam13454  70 EWLRARGALDEApgldpDDFPPRALYGRYLRDRfeealarapagvtvrvhrARVTDLRPRGD----GYR--VLLADG--R 141

                         170
                  ....*....|...
gi 57997182   137 SAVFDAVMVCSGH 149
Cdd:pfam13454 142 TLAADAVVLATGH 154
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
7-66 3.62e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 35.97  E-value: 3.62e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 57997182     7 VIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGV---WRFKENVEDGRASIYQSVVTNTSKEM 66
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNaysYRVPGYVFDYGAHIFHGSDEPNVRDL 63
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 3-43 4.98e-03

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 39.38  E-value: 4.98e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 57997182    3 KKVAVIGAGVSGLislkCCVDE----GLEPTCFERTEDIGGVWRF 43
Cdd:PRK12810 144 KKVAVVGSGPAGL----AAADQlaraGHKVTVFERADRIGGLLRY 184
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 3-43 5.35e-03

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 38.96  E-value: 5.35e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 57997182   3 KKVAVIGAGVSGLislkCC----VDEGLEPTCFERTEDIGGVWRF 43
Cdd:COG0493 122 KKVAVVGSGPAGL----AAayqlARAGHEVTVFEALDKPGGLLRY 162
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 3-39 9.54e-03

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 38.27  E-value: 9.54e-03
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 57997182   3 KKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGG 39
Cdd:COG1232   2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGG 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH