|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 785.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFW 379
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
22-373 |
6.90e-133 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 385.68 E-value: 6.90e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 22 PAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 101
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 102 LYYGSylYKE----TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATLTR 177
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 178 FFAFH-FLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEK----ISFHPYFTYKDLLGFAILLTALASLALFAPNllGD 252
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 253 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQFLFWVLVA 330
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2438938698 331 DVVILTWIGGMPveDPYIVIGQVASLLYFSLFLILMPAASWIE 373
Cdd:COG1290 347 FFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
6.02e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 281.95 E-value: 6.02e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 9 PLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 89 FFFICIYLHIGRGLYYGSY--LYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2438938698 167 GFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
2.99e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 261.93 E-value: 2.99e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 18 LVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 98 IGRGLYYG--SYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2438938698 176 TRFFAFHFLLPFVILAMTLVHLIFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-330 |
1.73e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.73e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2438938698 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHT-SKHRSLTFRPL--TQFLFWVLVA 330
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVatTVFLFGTVVA 140
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 785.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFW 379
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 717.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00119 2 APNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00119 82 NLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00119 162 VEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00119 242 TLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFW 379
Cdd:MTH00119 322 SQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 708.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFW 379
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 707.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFW 379
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 667.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMP 367
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 643.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 11 LKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 91 FICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 171 DNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLALFAPNLL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 251 GDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQFLFWVLVA 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 2438938698 331 DVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILM 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 624.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLF 378
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 620.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 1 MINIRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00145 2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 81 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSL 160
Cdd:MTH00145 82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALA 240
Cdd:MTH00145 162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 241 SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPL 320
Cdd:MTH00145 242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2438938698 321 TQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILmPAASWIENKLLF 378
Cdd:MTH00145 322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWDNILD 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 584.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00016 5 MRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00016 85 ANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00016 165 LWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00016 245 LLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLIlMPAASWIENKLLF 378
Cdd:MTH00016 325 LFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI-NPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-380 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 540.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLLFWW 380
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFKN 379
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 529.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFLILMPAASWIENKLL 377
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 517.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 4 IRKTHPLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQW 163
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 164 IWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLA 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 244 LFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQF 323
Cdd:MTH00224 245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2438938698 324 LFWVLVADVVILTWIGGMPVEDPYIVIGQVASLLYFSLFlILMPAASWIENKLL 377
Cdd:MTH00224 325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDLL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-374 |
1.24e-142 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 410.10 E-value: 1.24e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 2 INIRKTHpLLKIANDaLVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRN 81
Cdd:MTH00033 1 MRLRKTG-LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 82 MHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLV 161
Cdd:MTH00033 79 VHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 162 QWIWGGFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALAS 241
Cdd:MTH00033 159 EWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 242 LALF--APNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRP 319
Cdd:MTH00033 239 IGIEprIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNP 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2438938698 320 LTQFLFWVLVADVVILTWIGGMPV-EDPYIVIGQVASLLYFSLFLILMPAASWIEN 374
Cdd:MTH00033 319 TGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
22-373 |
6.90e-133 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 385.68 E-value: 6.90e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 22 PAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 101
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 102 LYYGSylYKE----TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATLTR 177
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 178 FFAFH-FLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEK----ISFHPYFTYKDLLGFAILLTALASLALFAPNllGD 252
Cdd:COG1290 189 FFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 253 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQFLFWVLVA 330
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2438938698 331 DVVILTWIGGMPveDPYIVIGQVASLLYFSLFLILMPAASWIE 373
Cdd:COG1290 347 FFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-366 |
4.40e-128 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 371.96 E-value: 4.40e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 15 NDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 94
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 95 YLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNAT 174
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 175 LTRFFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFaILLTALASLALFAPNLLGDPD 254
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSkhrSLTFRPLTQFLFWVLVADVVI 334
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVI 319
|
330 340 350
....*....|....*....|....*....|..
gi 2438938698 335 LTWIGGMPVEDPYIVIGQVASLLYFSLFLILM 366
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
6.02e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 281.95 E-value: 6.02e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 9 PLLKIANDALVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 89 FFFICIYLHIGRGLYYGSY--LYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2438938698 167 GFSVDNATLTRFFAFHFLLPFVILAMTLVHLIFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
18-364 |
1.34e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 279.18 E-value: 1.34e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 18 LVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 97
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 98 IGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATLTR 177
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 178 FFAFHFLLPFVILAMTLVHLIFLHETGSNNPLGL-NSDAEKISFHPYFTYKDLLGFAILLTALASLALFAPNLLGDPDNF 256
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 257 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLCSILVLMVVPilhtSKHRSLTFRPLTQFLFWVLVADVVILT 336
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323
|
330 340
....*....|....*....|....*...
gi 2438938698 337 WIGGMPVEDPYIVIGQVASLLYFSLFLI 364
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
2.99e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 261.93 E-value: 2.99e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 18 LVDLPAPANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 98 IGRGLYYG--SYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2438938698 176 TRFFAFHFLLPFVILAMTLVHLIFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-354 |
6.34e-51 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 167.05 E-value: 6.34e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 207 NPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2438938698 287 KLGGVLALLCSILVLMVVPILHTSKHRSlTFRPLTQFLFWVLVADVVILTWIGGMPVEDPYIVIGQVA 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
258-358 |
1.84e-47 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 156.48 E-value: 1.84e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHTSKHRSLTFRPLTQFLFWVLVADVVILTW 337
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2438938698 338 IGGMPVEDPYIVIGQVASLLY 358
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-253 |
1.21e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 154.32 E-value: 1.21e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 88 SFFFICIYLHIGRGLYYGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 166 GGFSVDNATLTRFFAFHF-LLPFVILAMTLVHLIFLHETGSNNPLGLNSDAEKISFHPYFTYKDLLGFAILLTALASLAL 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2438938698 245 FAPNLLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-209 |
5.72e-42 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 146.40 E-value: 5.72e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 33 FGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLYYGSYLYKE- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 112 -TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATLTRFFAFH-FLLPFVI 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2438938698 190 LAMTLVHLIFLHETGSNNPL 209
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-209 |
9.24e-34 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 124.83 E-value: 9.24e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 24 PANISAWWNFGSLLGLCLIAQIVTGLFLAMHYTPDTASAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLY 103
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 104 YGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGDSLVQWIWGGFSVDNATLTRFFAF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2438938698 182 H-FLLPFVILAMTLVHLIFLHETGSNNPL 209
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
258-345 |
3.55e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.27 E-value: 3.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438938698 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHT-SKHRSLTFRPLTQFLFwvLVADVVILt 336
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPFRRPVATAVF--LFGTLVTL- 142
|
90
....*....|..
gi 2438938698 337 WIG---GMPVED 345
Cdd:COG5679 143 WLGigaALPIDK 154
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
258-330 |
4.74e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 57.70 E-value: 4.74e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2438938698 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPIL-HTSKHRSLTFRP--LTQFLFWVLVA 330
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPvaTTVFLIGTAVA 140
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-330 |
1.73e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.73e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2438938698 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLCSILVLMVVPILHT-SKHRSLTFRPL--TQFLFWVLVA 330
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVatTVFLFGTVVA 140
|
|
| |
