NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2475851026|emb|CAI8285433|]
View 

MAG: Menaquinol-cytochrome c reductase cytochrome b subunit [Candidatus Poseidoniaceae archaeon]

Protein Classification

cytochrome b( domain architecture ID 11441733)

cytochrome b is a heme-binding component of cytochrome complexes such as the bc1 complex, a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
55-287 8.72e-70

Cytochrome b subunit of the bc complex [Energy production and conversion];


:

Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 220.82  E-value: 8.72e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  55 VFSWMDTRFRIQDYWNmskgayynmhrqmplTHAEKYKLRiiwYWYPLYCLGGISFLSFIILVMTGTILGIYYVPggegD 134
Cdd:COG1290    10 LADWLDERLPLASLVR---------------EHLEYPFPK---NWNFSYWFGELALYSFVIQILTGIFLTMYYKP----S 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 135 PSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWD 214
Cdd:COG1290    68 ASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWD 147
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2475851026 215 SLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:COG1290   148 QLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
 
Name Accession Description Interval E-value
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
55-287 8.72e-70

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 220.82  E-value: 8.72e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  55 VFSWMDTRFRIQDYWNmskgayynmhrqmplTHAEKYKLRiiwYWYPLYCLGGISFLSFIILVMTGTILGIYYVPggegD 134
Cdd:COG1290    10 LADWLDERLPLASLVR---------------EHLEYPFPK---NWNFSYWFGELALYSFVIQILTGIFLTMYYKP----S 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 135 PSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWD 214
Cdd:COG1290    68 ASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWD 147
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2475851026 215 SLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:COG1290   148 QLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
103-287 5.84e-68

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 209.84  E-value: 5.84e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 103 YCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGA 182
Cdd:NF040969   25 WCLGGLTFLLFVILTVTGIFLMFYYVP----TPEAAYESVQYLQNEVAFGQLVRNMHHWAANLMVVMVFLHMLRVFYTGS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 183 YRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVF 262
Cdd:NF040969  101 YKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQLGGSEVGAATLTRFYALHVF 180
                         170       180
                  ....*....|....*....|....*
gi 2475851026 263 ILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:NF040969  181 VLPAALIILMAAHFWRIRKQGISGP 205
PRK03735 PRK03735
cytochrome b6; Provisional
55-287 9.28e-58

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 184.53  E-value: 9.28e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  55 VFSWMDTRFRIQDYWNMSKGAYYNMHRQmPLTHAEKYklriiwywypLYCLGGISFLSFIILVMTGTILGIYYVPggegD 134
Cdd:PRK03735    5 VYDWFDERLDITPIWRDIADHEVPEHVN-PAHHFSAF----------VYCFGGLTFFCFVIQILSGMFLTMYYVP----D 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 135 PSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWD 214
Cdd:PRK03735   70 IKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWD 149
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2475851026 215 SLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:PRK03735  150 QKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGP 222
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
164-287 1.71e-34

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 122.74  E-value: 1.71e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 164 HFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLF 243
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 2475851026 244 GGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILLLPGLILALIVAHLLLVEKHGQFPP 124
 
Name Accession Description Interval E-value
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
55-287 8.72e-70

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 220.82  E-value: 8.72e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  55 VFSWMDTRFRIQDYWNmskgayynmhrqmplTHAEKYKLRiiwYWYPLYCLGGISFLSFIILVMTGTILGIYYVPggegD 134
Cdd:COG1290    10 LADWLDERLPLASLVR---------------EHLEYPFPK---NWNFSYWFGELALYSFVIQILTGIFLTMYYKP----S 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 135 PSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWD 214
Cdd:COG1290    68 ASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWD 147
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2475851026 215 SLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:COG1290   148 QLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
103-287 5.84e-68

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 209.84  E-value: 5.84e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 103 YCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGA 182
Cdd:NF040969   25 WCLGGLTFLLFVILTVTGIFLMFYYVP----TPEAAYESVQYLQNEVAFGQLVRNMHHWAANLMVVMVFLHMLRVFYTGS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 183 YRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVF 262
Cdd:NF040969  101 YKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQLGGSEVGAATLTRFYALHVF 180
                         170       180
                  ....*....|....*....|....*
gi 2475851026 263 ILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:NF040969  181 VLPAALIILMAAHFWRIRKQGISGP 205
PRK03735 PRK03735
cytochrome b6; Provisional
55-287 9.28e-58

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 184.53  E-value: 9.28e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  55 VFSWMDTRFRIQDYWNMSKGAYYNMHRQmPLTHAEKYklriiwywypLYCLGGISFLSFIILVMTGTILGIYYVPggegD 134
Cdd:PRK03735    5 VYDWFDERLDITPIWRDIADHEVPEHVN-PAHHFSAF----------VYCFGGLTFFCFVIQILSGMFLTMYYVP----D 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 135 PSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWD 214
Cdd:PRK03735   70 IKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWD 149
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2475851026 215 SLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:PRK03735  150 QKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGP 222
petB CHL00070
cytochrome b6
103-287 6.71e-48

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 159.12  E-value: 6.71e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 103 YCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGA 182
Cdd:CHL00070   34 YCLGGITLTCFLVQVATGFAMTFYYRP----TVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 183 YRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHVF 262
Cdd:CHL00070  110 FKKPRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHTF 189
                         170       180
                  ....*....|....*....|....*
gi 2475851026 263 ILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:CHL00070  190 VLPLLTAVFMLMHFLMIRKQGISGP 214
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
164-287 1.71e-34

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 122.74  E-value: 1.71e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 164 HFMVASVFLHMCRVYFTGAYRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLF 243
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 2475851026 244 GGSSLTPRTVTRMYFIHVFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILLLPGLILALIVAHLLLVEKHGQFPP 124
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
103-283 2.10e-34

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 123.26  E-value: 2.10e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 103 YCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGA 182
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTP----DVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 183 YRNPRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvF 262
Cdd:pfam00033  90 FSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLH-F 168
                         170       180
                  ....*....|....*....|.
gi 2475851026 263 ILPVIVTTLIIIHLFIVWVQG 283
Cdd:pfam00033 169 LLPFILAILMLLHLLFLHETG 189
CYTB MTH00016
cytochrome b; Validated
106-277 1.48e-20

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 90.12  E-value: 1.48e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 106 GGISFLSFIILVMTGTILGIYYVPGGEgdpsPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRN 185
Cdd:MTH00016   35 GSLLGLCLVIQILTGLFLSMHYTPHID----LAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFL 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 186 PRelNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILP 265
Cdd:MTH00016  111 ME--TWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALH-FLLP 187
                         170
                  ....*....|..
gi 2475851026 266 VIVTTLIIIHLF 277
Cdd:MTH00016  188 FVIAALSMIHLL 199
CYTB MTH00145
cytochrome b; Provisional
105-277 6.02e-20

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 88.42  E-value: 6.02e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 105 LGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYR 184
Cdd:MTH00145   34 FGSLLGLCLGIQILTGLFLSMHYTA----HVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYL 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 185 NPRelNWLIGVALMALTIVFGYSGYLLPWDSLAY-GAAVIgINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFI 263
Cdd:MTH00145  110 MQH--TWNIGVTLLLLSMGTAFLGYVLPWGQMSFwGATVI-TNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLH-FL 185
                         170
                  ....*....|....
gi 2475851026 264 LPVIVTTLIIIHLF 277
Cdd:MTH00145  186 LPFVILGLSVLHLL 199
CYTB MTH00034
cytochrome b; Validated
111-277 5.78e-19

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 85.53  E-value: 5.78e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 111 LSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNprELN 190
Cdd:MTH00034   39 LCLIIQIITGIFLAMHYTA----DISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVN--IET 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 191 WLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVTT 270
Cdd:MTH00034  113 WNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFH-FLFPFIIAA 191

                  ....*..
gi 2475851026 271 LIIIHLF 277
Cdd:MTH00034  192 LSIIHLL 198
CYTB MTH00224
cytochrome b; Provisional
96-287 6.85e-19

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 85.36  E-value: 6.85e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  96 IWYWYplyclGGISFLSFIILVMTGTILGIYYVPGGEgdpsPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMC 175
Cdd:MTH00224   30 IWWNY-----GSLLGLCLVIQVLTGLFLSMHYAPNIE----MAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVG 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 176 RVYFTGAYRNPRelNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTR 255
Cdd:MTH00224  101 RGLYYGSFNLSE--TWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNR 178
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2475851026 256 MYFIHvFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:MTH00224  179 FFSFH-FLLPFAIMGATILHIMFLHQTGSNNP 209
CYTB MTH00191
cytochrome b; Provisional
111-277 9.32e-19

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 84.97  E-value: 9.32e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 111 LSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRelN 190
Cdd:MTH00191   36 LCLIIQILTGLFLAMHYTA----DISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKE--T 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 191 WLIGVALMALTIVFGYSGYLLPWDSLAY-GAAVIgINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVT 269
Cdd:MTH00191  110 WNVGVILLILSMATAFLGYVLPWGQMSFwGATVI-TNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFH-FLLPFLIA 187

                  ....*...
gi 2475851026 270 TLIIIHLF 277
Cdd:MTH00191  188 ALSLIHLL 195
CYTB MTH00119
cytochrome b; Provisional
114-276 1.69e-18

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 84.18  E-value: 1.69e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 114 IILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNprELNWLI 193
Cdd:MTH00119   43 ITQILTGLFLAMHYTA----DISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLY--KETWNT 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 194 GVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVTTLII 273
Cdd:MTH00119  117 GVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALH-FLLPFLIAGLTL 195

                  ...
gi 2475851026 274 IHL 276
Cdd:MTH00119  196 IHL 198
CYTB MTH00100
cytochrome b; Provisional
114-276 9.12e-18

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 82.38  E-value: 9.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 114 IILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRelNWLI 193
Cdd:MTH00100   42 ILQILTGLFLAMHYTS----DTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLE--TWNI 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 194 GVALMALTIVFGYSGYLLPWDSLAY-GAAVIgINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVTTLI 272
Cdd:MTH00100  116 GIILLFTVMATAFMGYVLPWGQMSFwGATVI-TNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFIITALA 193

                  ....
gi 2475851026 273 IIHL 276
Cdd:MTH00100  194 MVHL 197
CYTB MTH00033
cytochrome b; Provisional
96-287 1.17e-17

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 81.91  E-value: 1.17e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  96 IWYWYPLyclGGISFLSFIILVMTGTILGIYYvpggEGDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMC 175
Cdd:MTH00033   24 ISYWWNF---GSLLCLCLGIQILTGVLLAMHY----RSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIG 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 176 RVYFTGAYRnpRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTR 255
Cdd:MTH00033   97 RGLYYGGYS--RVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2475851026 256 MYFIHvFILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:MTH00033  175 FFSLH-YLLPFVLVGLVLAHLLTLHEKGSNEP 205
CYTB MTH00053
cytochrome b; Provisional
102-277 1.30e-16

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 78.98  E-value: 1.30e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 102 LYCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTG 181
Cdd:MTH00053   31 LWNFGSLLGFCLIIQIITGIFLAMHYCA----DVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYG 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 182 AYRnpRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHv 261
Cdd:MTH00053  107 SYT--KIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLH- 183
                         170
                  ....*....|....*.
gi 2475851026 262 FILPVIVTTLIIIHLF 277
Cdd:MTH00053  184 YLLPFILAGLALVHLI 199
CYTB MTH00131
cytochrome b; Provisional
106-276 1.39e-16

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 78.93  E-value: 1.39e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 106 GGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRN 185
Cdd:MTH00131   34 GSLLGLCLITQILTGLFLAMHYTS----DISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLY 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 186 PRelNWLIGVALMALTIVFGYSGYLLPWDSLAY-GAAVIgINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFIL 264
Cdd:MTH00131  110 KE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFwGATVI-TNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFH-FLF 185
                         170
                  ....*....|..
gi 2475851026 265 PVIVTTLIIIHL 276
Cdd:MTH00131  186 PFVIAAATILHL 197
CYTB MTH00086
cytochrome b; Provisional
105-278 2.51e-16

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 78.06  E-value: 2.51e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 105 LGGISFLSFIILVMTGTILGIYYVPGGEGdpspAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYR 184
Cdd:MTH00086   22 FGSMLGMVLVFQILTGTFLAFYYTADSSM----AFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYR 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 185 npRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFIL 264
Cdd:MTH00086   98 --LKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLH-FLL 174
                         170
                  ....*....|....
gi 2475851026 265 PVIVTTLIIIHLFI 278
Cdd:MTH00086  175 PWGLLVLVLFHLIF 188
CYTB MTH00022
cytochrome b; Validated
102-287 4.56e-16

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 77.43  E-value: 4.56e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 102 LYCLGGISFLSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTG 181
Cdd:MTH00022   29 LWNFGSLLGLCLVIQIITGCFLSMHYCS----DVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYG 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 182 AYRnpRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHv 261
Cdd:MTH00022  105 GYL--KFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLH- 181
                         170       180
                  ....*....|....*....|....*.
gi 2475851026 262 FILPVIVTTLIIIHLFIVWVQGIAEP 287
Cdd:MTH00022  182 FLFPFILAFLVIVHLIYLHVDGSNNP 207
CYTB MTH00156
cytochrome b; Provisional
111-278 8.05e-16

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 76.36  E-value: 8.05e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 111 LSFIILVMTGTILGIYYVPggegDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPreLN 190
Cdd:MTH00156   29 LCLMIQIITGLFLAMHYTA----DIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLK--HT 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 191 WLIGVALMALTIVFGYSGYLLPWDSLAY-GAAVIgINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVT 269
Cdd:MTH00156  103 WMSGVIILFLVMATAFLGYVLPWGQMSFwGATVI-TNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFH-FLLPFIIL 180

                  ....*....
gi 2475851026 270 TLIIIHLFI 278
Cdd:MTH00156  181 AMVMIHLLF 189
CYTB MTH00074
cytochrome b; Provisional
114-276 1.14e-15

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 76.26  E-value: 1.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 114 IILVMTGTILGIYYVpggeGDPSPAYASMEFIMLELPFGYIIRAVHHWGTHFMVASVFLHMCRVYFTGAYRNPRelNWLI 193
Cdd:MTH00074   43 IAQIITGLFLAMHYT----ADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKE--TWNI 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 194 GVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPRTVTRMYFIHvFILPVIVTTLII 273
Cdd:MTH00074  117 GVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFH-FLLPFLIAGASI 195

                  ...
gi 2475851026 274 IHL 276
Cdd:MTH00074  196 IHL 198
CYTB MTH00046
cytochrome b; Validated
97-277 3.72e-14

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 71.55  E-value: 3.72e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026  97 WYWyplyCLGGISFLSFIILVMTGTILGIYYVpggegdpspAYASMEFIML-----ELPFGYIIRAVHHWGTHFMVASVF 171
Cdd:MTH00046   20 YYW----CSGFVLSVFMVIQVLTGVLLSLLYV---------ADSLCSFFCVmslsnDSFFTWCVRYWHIWGVNVLFILLF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2475851026 172 LHMCRVYFTGAYRnpRELNWLIGVALMALTIVFGYSGYLLPWDSLAYGAAVIGINLANSSPLIGKYIATLLFGGSSLTPR 251
Cdd:MTH00046   87 IHMGRALYYSSYS--KKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGV 164
                         170       180
                  ....*....|....*....|....*.
gi 2475851026 252 TVTRMYFIHVfILPVIVTTLIIIHLF 277
Cdd:MTH00046  165 TLVRVFSVHI-CLGFVILGLMVVHLF 189
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH