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Conserved domains on  [gi|222113409|emb|CAR41077|]
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conserved hypothetical protein [Streptococcus uberis 0140J]

Protein Classification

DUF1803 domain-containing protein( domain architecture ID 10556001)

DUF1803 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1803 pfam08820
Domain of unknown function (DUF1803); This small domain is found in one or two copies in ...
 3-93 2.57e-41

Domain of unknown function (DUF1803); This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.


:

Pssm-ID: 430238  Cd Length: 91  Bit Score: 135.56  E-value: 2.57e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222113409    3 TIINPNKMTKDPFFLNLVNYLDSESDVTLRQLKKAFSHIPNLDRKLDNYIKEGFVSRANRRYQLMLPALPEWSELRLDQM 82
Cdd:pfam08820   1 KIYNPNKLTNQPFFKELINYLYEHDDVTLRQIKKAFADQKKLDRFLDEYIDAGLILRENKRYRLNFPILAEPAELILDQQ 80

                          90
                  ....*....|.
gi 222113409   83 LLLSTTSPFYQ 93
Cdd:pfam08820  81 VFIEEESPIYQ 91
 
Name Accession Description Interval E-value
DUF1803 pfam08820
Domain of unknown function (DUF1803); This small domain is found in one or two copies in ...
 3-93 2.57e-41

Domain of unknown function (DUF1803); This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.


Pssm-ID: 430238  Cd Length: 91  Bit Score: 135.56  E-value: 2.57e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222113409    3 TIINPNKMTKDPFFLNLVNYLDSESDVTLRQLKKAFSHIPNLDRKLDNYIKEGFVSRANRRYQLMLPALPEWSELRLDQM 82
Cdd:pfam08820   1 KIYNPNKLTNQPFFKELINYLYEHDDVTLRQIKKAFADQKKLDRFLDEYIDAGLILRENKRYRLNFPILAEPAELILDQQ 80

                          90
                  ....*....|.
gi 222113409   83 LLLSTTSPFYQ 93
Cdd:pfam08820  81 VFIEEESPIYQ 91
 
Name Accession Description Interval E-value
DUF1803 pfam08820
Domain of unknown function (DUF1803); This small domain is found in one or two copies in ...
 3-93 2.57e-41

Domain of unknown function (DUF1803); This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.


Pssm-ID: 430238  Cd Length: 91  Bit Score: 135.56  E-value: 2.57e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222113409    3 TIINPNKMTKDPFFLNLVNYLDSESDVTLRQLKKAFSHIPNLDRKLDNYIKEGFVSRANRRYQLMLPALPEWSELRLDQM 82
Cdd:pfam08820   1 KIYNPNKLTNQPFFKELINYLYEHDDVTLRQIKKAFADQKKLDRFLDEYIDAGLILRENKRYRLNFPILAEPAELILDQQ 80

                          90
                  ....*....|.
gi 222113409   83 LLLSTTSPFYQ 93
Cdd:pfam08820  81 VFIEEESPIYQ 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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