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Conserved domains on  [gi|257631686|emb|CBD22223|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

folate/biopterin family MFS transporter( domain architecture ID 13024750)

folate/biopterin family major facilitator superfamily (MFS) transporter facilitates folate monoglutamate transport involved in tetrahydrofolate biosynthesis, as well as the transport of antifolates such as methotrexate and aminopterin

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.71

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
68-468 9.31e-147

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 425.87  E-value: 9.31e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  68 NQGFSGSIFKVVTDYYWKDVQQVQPSVVqLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVVL 147
Cdd:cd17484    9 SQGVAGLSWLAVSYYYKDDLHLGPASVQ-ALTSIASLPWAIKPLYGLLSDSVPIFGYRRKPYLILAGALGALSWLALALV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 148 GKLPAALALSCLLGVSAAMAIADVVIDACIATNSINI-RSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL 226
Cdd:cd17484   88 SNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGApQSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELLGPRTVFAVT 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 227 AFSPATIVILGFFIYEKRSSTVPTQKTKKDtdglgvAVKGMCKTVKYPEVWKPSLYMFISLALNISTHEGHFYWYTdpta 306
Cdd:cd17484  168 SFFPLLLLIVAFFVKEERVPPHRTKENFDE------QLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN---- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 307 GPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFT 386
Cdd:cd17484  238 ELGFSPEFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGLTDLILVTRWNLKLGIPDHAFVLGDDAVV 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 387 KMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNILRLVTVCF 466
Cdd:cd17484  318 TVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKALGVTSTNFDNLWLLILICNLSRLLPLLF 397

                 ..
gi 257631686 467 VF 468
Cdd:cd17484  398 LF 399
 
Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
68-468 9.31e-147

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 425.87  E-value: 9.31e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  68 NQGFSGSIFKVVTDYYWKDVQQVQPSVVqLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVVL 147
Cdd:cd17484    9 SQGVAGLSWLAVSYYYKDDLHLGPASVQ-ALTSIASLPWAIKPLYGLLSDSVPIFGYRRKPYLILAGALGALSWLALALV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 148 GKLPAALALSCLLGVSAAMAIADVVIDACIATNSINI-RSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL 226
Cdd:cd17484   88 SNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGApQSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELLGPRTVFAVT 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 227 AFSPATIVILGFFIYEKRSSTVPTQKTKKDtdglgvAVKGMCKTVKYPEVWKPSLYMFISLALNISTHEGHFYWYTdpta 306
Cdd:cd17484  168 SFFPLLLLIVAFFVKEERVPPHRTKENFDE------QLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN---- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 307 GPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFT 386
Cdd:cd17484  238 ELGFSPEFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGLTDLILVTRWNLKLGIPDHAFVLGDDAVV 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 387 KMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNILRLVTVCF 466
Cdd:cd17484  318 TVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKALGVTSTNFDNLWLLILICNLSRLLPLLF 397

                 ..
gi 257631686 467 VF 468
Cdd:cd17484  398 LF 399
BT1 pfam03092
BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative ...
69-488 6.10e-100

BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein Swiss:Q25272, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).


Pssm-ID: 308617  Cd Length: 432  Bit Score: 307.35  E-value: 6.10e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686   69 QGFSGSIFKVVTDYYWKDVQQVQPSVVQLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAI--AIVV 146
Cdd:pfam03092   1 QGVALGLSRLATQFMLKDRLGLDPARYQRLSGLATLPWSIKPLYGMLSDGFALFGYRRRWYLALSGLLGGAFWLlyGLLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  147 LGKLPAALALSCLLGVSAAMAIADVVIDACIATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL 226
Cdd:pfam03092  81 ASEASAPVAAAFIFLSSLGVAIVDVLVDALVSERARQSPTPGPSLQSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFFVT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  227 AFSPATIVILGFFIYEKRSSTVPTQKTKKDTDGLGVAVKG-------MCKTVKYPEVWKPSLYMFISLA-LNISTHEGHF 298
Cdd:pfam03092 161 AALQLLTCVVALLIKESSLGLPAKHEPKRPVPCLFGLFEMnrevisrNWKAFRYSEILTPTLFAMLSQAiLPLVIAKANV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  299 YWYTDPTAGPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLF 378
Cdd:pfam03092 241 FFYTTNVLGPNFSYSFYGTVKVIGSIAGLIGVTLYNRFLKKHPYRLTFGVTTVLQVLSGLFDLILVKRWNRYIGISDHMY 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  379 VITEESFTKMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNI 458
Cdd:pfam03092 321 ILGDSIILEVLYMLKFMPVLVLLARLCPRGSESTVFALLASIANLGQSVSSSLGALLMEYLGVTRCDFSNLPLLLLIGSL 400
                         410       420       430
                  ....*....|....*....|....*....|.
gi 257631686  459 LRLVTVCFVFLVPDSDHLDDL-VPSDVLPKK 488
Cdd:pfam03092 401 CTLLPLPLLGLLPPARICDDIdEDGKAVRDA 431
fbt TIGR00788
folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The ...
100-491 8.60e-58

folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. [Cell envelope, Other]


Pssm-ID: 273268  Cd Length: 468  Bit Score: 198.85  E-value: 8.60e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  100 GLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLG---LVSAIAIVVLGKLPAALalSCLLGvSAAMAIADVVIDAC 176
Cdd:TIGR00788  68 GLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGsaiLYGLLPGKVSSAKVAAA--FIFLA-ALAKALYDVLVDSL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  177 IATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQgaLGVLAFspATIVILGFFIY----EKRSSTVP--T 250
Cdd:TIGR00788 145 YSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTR--ILFLIT--AALLLLQLFVSnlskERRAFVRPriG 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  251 QKTKKDTDGLGVAVKGMCKT--------VKYPEVWKPSLYMFISLAlNISTHEGHFYWYTdpTAGPAFSQEFVGIIYAVG 322
Cdd:TIGR00788 221 TYLEMNMALLTLGVLANVKVqilglrgaIQLLEIAKPLIFIFLSYA-NLPGASGSVFCAT--TQCLPGGPSFSGMSKVVG 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  323 ALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFTKMISKIRWIPMVVLST 402
Cdd:TIGR00788 298 NLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLA 377
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  403 RLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNILRLVTVCFVFLVPDSDHLDDLVPS 482
Cdd:TIGR00788 378 RLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPRLEDVIDTEGK 457

                  ....*....
gi 257631686  483 DVLPKKQSE 491
Cdd:TIGR00788 458 RAISKAAPE 466
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
107-440 4.39e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 52.21  E-value: 4.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 107 VMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVVLGKLPAALALscllgvsAAMAIADVVIDACIATNSINIRS 186
Cdd:COG2211   61 ITDPLIGALSDRTRTRWGRRRPWILIGAIPLALSFVLLFTAPDLSPTGKL-------IYALVTYLLLGLAYTLVNIPYSA 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 187 LAPDI----------QSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL-------AFSPATIVILGFFIYEKRSSTVP 249
Cdd:COG2211  134 LGAELtpdyeertrlSSWRFAFAGLGGLLASVLPPPLVAAFGGDAALGYRltalifaVLGLLAFLLTFFGTKERPVPEEE 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 250 TQKTKKDtdglgvavkgMCKTVKYPEVWKPSL-YMFISLALNISTheGHFYWYTDPTAGpaFSQEFVGIIYAVGALASMF 328
Cdd:COG2211  214 KVSLKES----------LKALLKNRPFLLLLLaYLLFFLALALVA--ALLLYYFKYVLG--LSAALVGLLLALYFLAALL 279
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 329 GVLIYHKKLKGYSFRNILFFAQLLYVFSGMLdLVFIKRWNLTLgipdsLFVITeesftkMISKIRWIPMVVLS----TRL 404
Cdd:COG2211  280 GAPLWPRLAKRFGKKKAFIIGLLLAALGLLL-LFFLGPGNLWL-----LLVLA------ALAGIGLGAILVLPwamlADV 347
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 257631686 405 CPLG-------IEGTFFAFLMCIDSFGQLASKWGGGFVLHAFG 440
Cdd:COG2211  348 VDYDewktgrrREGLYFGIFTFAIKLGQALAGALAGLLLALFG 390
 
Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
68-468 9.31e-147

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 425.87  E-value: 9.31e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  68 NQGFSGSIFKVVTDYYWKDVQQVQPSVVqLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVVL 147
Cdd:cd17484    9 SQGVAGLSWLAVSYYYKDDLHLGPASVQ-ALTSIASLPWAIKPLYGLLSDSVPIFGYRRKPYLILAGALGALSWLALALV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 148 GKLPAALALSCLLGVSAAMAIADVVIDACIATNSINI-RSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL 226
Cdd:cd17484   88 SNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGApQSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELLGPRTVFAVT 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 227 AFSPATIVILGFFIYEKRSSTVPTQKTKKDtdglgvAVKGMCKTVKYPEVWKPSLYMFISLALNISTHEGHFYWYTdpta 306
Cdd:cd17484  168 SFFPLLLLIVAFFVKEERVPPHRTKENFDE------QLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN---- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 307 GPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFT 386
Cdd:cd17484  238 ELGFSPEFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGLTDLILVTRWNLKLGIPDHAFVLGDDAVV 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 387 KMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNILRLVTVCF 466
Cdd:cd17484  318 TVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKALGVTSTNFDNLWLLILICNLSRLLPLLF 397

                 ..
gi 257631686 467 VF 468
Cdd:cd17484  398 LF 399
BT1 pfam03092
BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative ...
69-488 6.10e-100

BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein Swiss:Q25272, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).


Pssm-ID: 308617  Cd Length: 432  Bit Score: 307.35  E-value: 6.10e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686   69 QGFSGSIFKVVTDYYWKDVQQVQPSVVQLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAI--AIVV 146
Cdd:pfam03092   1 QGVALGLSRLATQFMLKDRLGLDPARYQRLSGLATLPWSIKPLYGMLSDGFALFGYRRRWYLALSGLLGGAFWLlyGLLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  147 LGKLPAALALSCLLGVSAAMAIADVVIDACIATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL 226
Cdd:pfam03092  81 ASEASAPVAAAFIFLSSLGVAIVDVLVDALVSERARQSPTPGPSLQSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFFVT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  227 AFSPATIVILGFFIYEKRSSTVPTQKTKKDTDGLGVAVKG-------MCKTVKYPEVWKPSLYMFISLA-LNISTHEGHF 298
Cdd:pfam03092 161 AALQLLTCVVALLIKESSLGLPAKHEPKRPVPCLFGLFEMnrevisrNWKAFRYSEILTPTLFAMLSQAiLPLVIAKANV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  299 YWYTDPTAGPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLF 378
Cdd:pfam03092 241 FFYTTNVLGPNFSYSFYGTVKVIGSIAGLIGVTLYNRFLKKHPYRLTFGVTTVLQVLSGLFDLILVKRWNRYIGISDHMY 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  379 VITEESFTKMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNI 458
Cdd:pfam03092 321 ILGDSIILEVLYMLKFMPVLVLLARLCPRGSESTVFALLASIANLGQSVSSSLGALLMEYLGVTRCDFSNLPLLLLIGSL 400
                         410       420       430
                  ....*....|....*....|....*....|.
gi 257631686  459 LRLVTVCFVFLVPDSDHLDDL-VPSDVLPKK 488
Cdd:pfam03092 401 CTLLPLPLLGLLPPARICDDIdEDGKAVRDA 431
fbt TIGR00788
folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The ...
100-491 8.60e-58

folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. [Cell envelope, Other]


Pssm-ID: 273268  Cd Length: 468  Bit Score: 198.85  E-value: 8.60e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  100 GLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLG---LVSAIAIVVLGKLPAALalSCLLGvSAAMAIADVVIDAC 176
Cdd:TIGR00788  68 GLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGsaiLYGLLPGKVSSAKVAAA--FIFLA-ALAKALYDVLVDSL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  177 IATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQgaLGVLAFspATIVILGFFIY----EKRSSTVP--T 250
Cdd:TIGR00788 145 YSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTR--ILFLIT--AALLLLQLFVSnlskERRAFVRPriG 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  251 QKTKKDTDGLGVAVKGMCKT--------VKYPEVWKPSLYMFISLAlNISTHEGHFYWYTdpTAGPAFSQEFVGIIYAVG 322
Cdd:TIGR00788 221 TYLEMNMALLTLGVLANVKVqilglrgaIQLLEIAKPLIFIFLSYA-NLPGASGSVFCAT--TQCLPGGPSFSGMSKVVG 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  323 ALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFTKMISKIRWIPMVVLST 402
Cdd:TIGR00788 298 NLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLA 377
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  403 RLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNILRLVTVCFVFLVPDSDHLDDLVPS 482
Cdd:TIGR00788 378 RLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPRLEDVIDTEGK 457

                  ....*....
gi 257631686  483 DVLPKKQSE 491
Cdd:TIGR00788 458 RAISKAAPE 466
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
97-455 2.25e-07

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 52.81  E-value: 2.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  97 LYMGLYYIPWVMRPIWGLFTDVFPikgykRKPYFVVSGVLGLVSAIAIVVLGKLPAALALSCLLGVSAAMAIadvvidac 176
Cdd:cd06174   36 LFALFSLGYALLQPLAGLLADRFG-----RRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLID-------- 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 177 IATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLGPQGALG---VLAFSPATIVILGFFIYEKRSSTVPTQKT 253
Cdd:cd06174  103 PAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGwraVFLIAAALALLAAILLLLVVPDPPESARA 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 254 KKDTDGLGVAVKGMCKTVKYPEVWKPSLYMFISLALNISTHeghFYWYTDPTAGPAFSQEFVGIIYAVGALASMFGVLIY 333
Cdd:cd06174  183 KNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFS---TLLPLFLLDLGGLSVAVAGLLLSLFGLAGALGSLLL 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 334 HKKLKGYSFRNILFFAQLLyVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFtkmiskirWIPMVVLSTRLCPLGIEGTF 413
Cdd:cd06174  260 GLLSDRLIGRKPLLLIGLL-LMALGLALLLLAPSLLLLLLLLLLLGFGLGGL--------LPLSFALIAELFPPEIRGTA 330
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 257631686 414 FAFLMCIDSFGQLASKWGGGFVLhafgVTRHDFGNLWLVILI 455
Cdd:cd06174  331 FGLLNTFGFLGGAIGPLLAGFLL----AATFGLTGAFLVLAV 368
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
107-440 4.39e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 52.21  E-value: 4.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 107 VMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVVLGKLPAALALscllgvsAAMAIADVVIDACIATNSINIRS 186
Cdd:COG2211   61 ITDPLIGALSDRTRTRWGRRRPWILIGAIPLALSFVLLFTAPDLSPTGKL-------IYALVTYLLLGLAYTLVNIPYSA 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 187 LAPDI----------QSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVL-------AFSPATIVILGFFIYEKRSSTVP 249
Cdd:COG2211  134 LGAELtpdyeertrlSSWRFAFAGLGGLLASVLPPPLVAAFGGDAALGYRltalifaVLGLLAFLLTFFGTKERPVPEEE 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 250 TQKTKKDtdglgvavkgMCKTVKYPEVWKPSL-YMFISLALNISTheGHFYWYTDPTAGpaFSQEFVGIIYAVGALASMF 328
Cdd:COG2211  214 KVSLKES----------LKALLKNRPFLLLLLaYLLFFLALALVA--ALLLYYFKYVLG--LSAALVGLLLALYFLAALL 279
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 329 GVLIYHKKLKGYSFRNILFFAQLLYVFSGMLdLVFIKRWNLTLgipdsLFVITeesftkMISKIRWIPMVVLS----TRL 404
Cdd:COG2211  280 GAPLWPRLAKRFGKKKAFIIGLLLAALGLLL-LFFLGPGNLWL-----LLVLA------ALAGIGLGAILVLPwamlADV 347
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 257631686 405 CPLG-------IEGTFFAFLMCIDSFGQLASKWGGGFVLHAFG 440
Cdd:COG2211  348 VDYDewktgrrREGLYFGIFTFAIKLGQALAGALAGLLLALFG 390
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
110-440 1.22e-05

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 47.60  E-value: 1.22e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 110 PIWGLFTDVFPIKGYKRKPYFVVSGV-LGLVSAIAIVVL-----GKLPAALALSCLLGVSAAMaiADVVIDACIA--TNS 181
Cdd:cd17332   53 PLMGYLIDRTRSRWGRFRPWLLWGAIpLALLFVLLFTTPdgsgtGKLIYALITYILLDLLYTL--VNIPYTALIPelTDD 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 182 INIRSLapdIQSLCMVCSSAGALVGYATSGVFVHQLG-PQGALGVLAF-------SPATIVILGFFIYEKRSSTVPTQKT 253
Cdd:cd17332  131 PEERTS---LTSWRMFFATIGGLLVTVLPPPLVAYFGgGNASRGYFLTaliigiiGIILLLICFFGTRERVVPPEEEKSK 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 254 KKDTDGLGVAVKgmcktvKYPEVWKPSLYMFISLALNISTHEGhFYWYTDPTAGPAFSQEFVGIIyavgALASMFGVLIY 333
Cdd:cd17332  208 LPLLKSLKALLK------NRPFLILLLAYLLYFLAFNIVNTVL-VYYFKYVLGGRAELVLLLLLI----LSGALLALLPW 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 334 HKKLKGYSFRNILFFAQLLYVFSGMLdLVFIKRWNLTLGIPDSLFVITeesFTKMISKIRW--IPMVVLSTRLC-PLGIE 410
Cdd:cd17332  277 PPLKKRFGKKKAFFIGLLLAILGLLL-LFFLPPGNLVLILVLAVLAGI---GYGGANLLPWamLADVIDYGELKtGKRRE 352
                        330       340       350
                 ....*....|....*....|....*....|
gi 257631686 411 GTFFAFLMCIDSFGQLASKWGGGFVLHAFG 440
Cdd:cd17332  353 GIFYSVMTFFRKLGLALAGALVGLILSLAG 382
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
97-359 1.99e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 46.51  E-value: 1.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  97 LYMGLYYIPW-VMRPIWGLFTDVFPikgykRKPYFVVSGVLGLVSAIAIVVLGKLPAALALSCLLGVSAAMAIAdvvida 175
Cdd:COG2814   49 LVVTAYLLGAaLGAPLAGRLADRFG-----RRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFP------ 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 176 ciATNSInIRSLAPD-----IQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVLAFSPATIVILGFFiyekrssTVPT 250
Cdd:COG2814  118 --AALAL-IADLVPPerrgrALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLALLLLLR-------LLPE 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 251 QKTKKDTDGLGvavkGMCKTVKYPEVWKPSLYMFISlalnisthegHFYWYTDPTAGPAF-------SQEFVGIIYAVGA 323
Cdd:COG2814  188 SRPAARARLRG----SLRELLRRPRLLLLLLLAFLL----------GFGFFALFTYLPLYlqevlglSASAAGLLLALFG 253
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 257631686 324 LASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGML 359
Cdd:COG2814  254 LGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLL 289
MFS_1 pfam07690
Major Facilitator Superfamily;
107-359 2.14e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 46.64  E-value: 2.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  107 VMRPIWGLFTDVFPikgykRKPYFVVSGVLGLVSAIAIVVLGKLPAALALSCLLGVSAAMAIAdvVIDACIATN-SINIR 185
Cdd:pfam07690  47 LAQPLAGRLSDRFG-----RRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFP--AALALIADWfPPEER 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  186 SLApdiQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVLAFsPATIVILGFFIYEKRSSTVPTQKTKKDTDGLGVAVK 265
Cdd:pfam07690 120 GRA---LGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAI-LSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWK 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  266 GMCKtvkypevwKPSLYMFISLALNISTHEGHFYWYTDPTAGPAFSQEFVGIIYAVGALASMFGVLIYHKKLKGYSFRNI 345
Cdd:pfam07690 196 ALLR--------DPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRR 267
                         250
                  ....*....|....
gi 257631686  346 LFFAQLLYVFSGML 359
Cdd:pfam07690 268 LLLALLLLILAALG 281
MFS_MFSD3 cd17485
Major facilitator superfamily domain containing 3 protein; Major facilitator superfamily ...
99-465 3.04e-04

Major facilitator superfamily domain containing 3 protein; Major facilitator superfamily domain containing 3 protein (MFSD3) is a predicted acetyl-CoA transporter. As an atypical putative membrane-bound solute carrier (SLC), MFSD3 is most likely to be functionally active in the plasma membrane and not in any intracellular organelles. MFSD3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341038 [Multi-domain]  Cd Length: 386  Bit Score: 42.98  E-value: 3.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  99 MGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLvsAIAIVVLGKLPAALALSCLLGVSAAMAIADVVIDacIA 178
Cdd:cd17485   37 LKLLYLPWVLKFLWAPLVDRYGLPRLGRRRSWLLPTQLGL--ALLLLALAFLPPTTNLLAFLGLLFLLNLFSATQD--IA 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 179 TNSINIRSLAPDIQSLC----MVCSSAGALVGYATSGVFVHQLGPQGALGVLAFSPATIVILGFFIYEKRSSTVPTQKTK 254
Cdd:cd17485  113 TDGLAVELLTPEERGLGnaaqVVGYKLGSLLGGGGLLWLYDLIGWQSLLLSLAALYLLLLLPVLFLRELELPQQPPASER 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 255 KDTDGLGV----AVKGMCKTVKYPEVWKPSLYMFISLALNISTHEGhfywytdptagpaFSQEFVGIIYAV-GALASMFG 329
Cdd:cd17485  193 GAALKASLraflRRPGTRWLLLFLLLYKLGEQGALAMLPPFLVDRG-------------FSLSQIGLLSGVgGSLVSIAG 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 330 VLiyhkkLKGYSFRNIlFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFTkMISKIRWIPMVVLST---RLCP 406
Cdd:cd17485  260 SL-----LGGYLLKRR-GRRRLLLLGGLLRLLLLGLYTLLALGGSGLNWVLLLASLA-LLHLVGGMITTALFTlmmDCSQ 332
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 257631686 407 LGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGvtrhdFGNLWLVILIRNILRLVTVC 465
Cdd:cd17485  333 QAQAGTDYTLLATVEVLGKLLFGSLAGFLADHLG-----YAAAFLLFAILSALSVLLLL 386
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
113-355 1.04e-03

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 41.44  E-value: 1.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 113 GLFTDVFPikgyKRKPyFVVSGVLGLVSAIAIVVLGKLPAALALSCLL-GVSAAMAIAdvvidACIATNSINIRSLAPDI 191
Cdd:cd17490   52 GILSDRIG----KRKL-FIIIGLLFTVLASLIMILFPSPWGLLIARFLsGIAAATWVS-----FTVLYASYFPPDEAAKA 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 192 QSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVLAFSPATIVILGFFIYEKRSSTVPTQKTKKDtdglgvavkgMCKTV 271
Cdd:cd17490  122 MGLINLVNNLGQLIAFLIGGLIAEHFGMRAPFLLAALAGVLGFILSLFIKEERREKKPVLTELKE----------LLSVL 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 272 KYPEVWKPSLYMFISLALNISTHEGHFYWYTDPTAGPAFSQEFVGIIYAV-GALASMFGVLIYHKKLKGYSFRNILFFAQ 350
Cdd:cd17490  192 KDKKLLFFSLLAILQQMITFSTTFGFTPLIAKQLGASSFQLGLLSIIYLLpNALASLLSGTLFYKKLGERNTIIIGFLLL 271

                 ....*
gi 257631686 351 LLYVF 355
Cdd:cd17490  272 GAYCF 276
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
97-240 1.24e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 41.01  E-value: 1.24e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  97 LYMGLYYIPW-VMRPIWGLFTDVFpikGYKRKPYFVVSGVLGLVSAIAIVVLGKLPAALALSCLLGVSAAMAIAdVVIDA 175
Cdd:COG2271  220 LLLSLPFLAGiVGSLLGGWLSDRL---GRRRKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFG-LLWAL 295
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257631686 176 CIATNSINIRSLApdiQSLCMVCSSAGALVGYATSGVFVHQLGPQGALGVLAFSPATIVILGFFI 240
Cdd:COG2271  296 AAELFPKKARGTA---SGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLL 357
MFS_BCD_PucC-like cd06176
Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator ...
99-265 2.13e-03

Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily; The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 349950 [Multi-domain]  Cd Length: 409  Bit Score: 40.56  E-value: 2.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686  99 MGLYYIPWVMRPIWGLFTDVFPIKGYKRKPYFV----VSGVLGLVSAIAIVVLGKLPAALALscllgvsAAMAIADVVID 174
Cdd:cd06176   42 IALHYLVAPLRVWIGHRSDTHPLRGYRRTPYIWlgmlLLALGLALAPFAALLLAGAAFWLGL-------ALAVLAFLLYG 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257631686 175 ACIATNSINIRSLAPDI-----QSLCMVCSSAGALVGYATSGVFVHQL----GPQGALGVLAFSPATIVILGFF-IY--E 242
Cdd:cd06176  115 IGVGAAGTAFLALLADLtpeerRPRAVTVVWTMLILGIIVTAIVFGRLldpySPERLIQVFQIVALVALLLALLaLWgvE 194
                        170       180
                 ....*....|....*....|...
gi 257631686 243 KRSSTVPTQKTKKDTDGLGVAVK 265
Cdd:cd06176  195 RRRSRAALAAEEAPPETFREALR 217
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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