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Conserved domains on  [gi|300628348|emb|CBU85850|]
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unnamed protein product [Schizosaccharomyces pombe]

Protein Classification

Mcm10/DnaG-type zinc finger protein( domain architecture ID 10558338)

Mcm10/DnaG-type zinc finger protein similar to fungal minichromosome maintenance protein 10 (Mcm10) that is required for DNA synthesis and for entry into or completion of S phase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-primase pfam09329
Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.
 291-336 8.05e-18

Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.


:

Pssm-ID: 462758  Cd Length: 46  Bit Score: 77.21  E-value: 8.05e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 300628348  291 GRSKHLGYCSSRRKSGELCKHWLDKRAGDVCEYHVDLAVQRSMSTR 336
Cdd:pfam09329   1 GTSRDLGYCKAVKKDGKPCTSWINKRKGEYCEYHVEAAYRKSRAKR 46
 
Name Accession Description Interval E-value
zf-primase pfam09329
Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.
 291-336 8.05e-18

Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.


Pssm-ID: 462758  Cd Length: 46  Bit Score: 77.21  E-value: 8.05e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 300628348  291 GRSKHLGYCSSRRKSGELCKHWLDKRAGDVCEYHVDLAVQRSMSTR 336
Cdd:pfam09329   1 GTSRDLGYCKAVKKDGKPCTSWINKRKGEYCEYHVEAAYRKSRAKR 46
 
Name Accession Description Interval E-value
zf-primase pfam09329
Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.
 291-336 8.05e-18

Primase zinc finger; This zinc finger is found in yeast Mcm10 proteins and DnaG-type primases.


Pssm-ID: 462758  Cd Length: 46  Bit Score: 77.21  E-value: 8.05e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 300628348  291 GRSKHLGYCSSRRKSGELCKHWLDKRAGDVCEYHVDLAVQRSMSTR 336
Cdd:pfam09329   1 GTSRDLGYCKAVKKDGKPCTSWINKRKGEYCEYHVEAAYRKSRAKR 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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