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Conserved domains on  [gi|508080096|emb|CCO11167|]
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putative uncharacterized protein [Carnobacterium maltaromaticum LMA28]

Protein Classification

DUF2877 domain-containing protein( domain architecture ID 10568447)

DUF2877 domain-containing protein similar to Escherichia coli YahE and YlbF proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 26-134 1.13e-37

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


:

Pssm-ID: 431864  Cd Length: 109  Bit Score: 124.26  E-value: 1.13e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508080096   26 FIGRGQGLTPSGDDFLVGLLSLEKGFSIIDNQFEIILETFV-SSEKLTTDISEAYLQAALKGRFSTSINQLIDVLAGTKN 104
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVlAALGRTTDISAAYLRHAARGRFSEPLLALLRALSSGDP 80

                          90       100       110
                  ....*....|....*....|....*....|
gi 508080096  105 KTALPDILtKIIQNGHTSGIDTLTGILVGL 134
Cdd:pfam11392  81 EELAKAID-RLLAIGHTSGTDTLLGLLLGL 109
 
Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 26-134 1.13e-37

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


Pssm-ID: 431864  Cd Length: 109  Bit Score: 124.26  E-value: 1.13e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508080096   26 FIGRGQGLTPSGDDFLVGLLSLEKGFSIIDNQFEIILETFV-SSEKLTTDISEAYLQAALKGRFSTSINQLIDVLAGTKN 104
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVlAALGRTTDISAAYLRHAARGRFSEPLLALLRALSSGDP 80

                          90       100       110
                  ....*....|....*....|....*....|
gi 508080096  105 KTALPDILtKIIQNGHTSGIDTLTGILVGL 134
Cdd:pfam11392  81 EELAKAID-RLLAIGHTSGTDTLLGLLLGL 109
 
Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 26-134 1.13e-37

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


Pssm-ID: 431864  Cd Length: 109  Bit Score: 124.26  E-value: 1.13e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508080096   26 FIGRGQGLTPSGDDFLVGLLSLEKGFSIIDNQFEIILETFV-SSEKLTTDISEAYLQAALKGRFSTSINQLIDVLAGTKN 104
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVlAALGRTTDISAAYLRHAARGRFSEPLLALLRALSSGDP 80

                          90       100       110
                  ....*....|....*....|....*....|
gi 508080096  105 KTALPDILtKIIQNGHTSGIDTLTGILVGL 134
Cdd:pfam11392  81 EELAKAID-RLLAIGHTSGTDTLLGLLLGL 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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