|
Name |
Accession |
Description |
Interval |
E-value |
| AroA |
COG0128 |
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; ... |
1-424 |
0e+00 |
|
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; 5-enolpyruvylshikimate-3-phosphate synthase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis
Pssm-ID: 439898 Cd Length: 421 Bit Score: 626.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVcEVTGVGG 80
Cdd:COG0128 1 MSSLTIAPPSPLKGTVRVPGSKSISHRALLLAALAEGESTIRNLLESDDTLATLEALRALGAEIEELDGGTL-RVTGVGG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKAlDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENeNYPPLKITGTGLKS 160
Cdd:COG0128 80 GLKEPDA-VLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQLGARIESRGG-GYLPLTIRGGPLKG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 161 GAVSIDGSISSQFLTAFLMAAPLAEGEVTIKIDGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSaPGDFLV 240
Cdd:COG0128 158 GEYEIPGSASSQFKSALLLAGPLAEGGLEITVTGELESKPYRDHTERMLRAFGVEVEVEGYRRFTVPGGQRYR-PGDYTV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 241 EGDASSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCGELKGIDMDYNHIPDAAMTIA 320
Cdd:COG0128 237 PGDISSAAFFLAAAAITGSEVTVEGVGLNSTQGDTGILDILKEMGADIEIENDGITVRGSPLKGIDIDLSDIPDEAPTLA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 321 TTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVAL-SD 399
Cdd:COG0128 317 VLAAFAEGTTRIRGAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGPKLKGAEVDSYGDHRIAMAFAVAGLrAE 396
|
410 420
....*....|....*....|....*
gi 857999380 400 TPVTINDPGCTSKTFPDYFDKLKML 424
Cdd:COG0128 397 GPVTIDDAECVAKSFPDFFELLESL 421
|
|
| PRK11860 |
PRK11860 |
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase; |
1-421 |
0e+00 |
|
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;
Pssm-ID: 237003 [Multi-domain] Cd Length: 661 Bit Score: 612.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVceVTGVGG 80
Cdd:PRK11860 4 TEFLDLPPLLSAGGTVRLPGSKSISNRVLLLAALSEGTTTVRDLLDSDDTRVMLDALRALGCGVEQLGDTYR--ITGLGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKAlDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGTGLK- 159
Cdd:PRK11860 82 QFPVKQA-DLFLGNAGTAMRPLTAALALLGGEYELSGVPRMHERPIGDLVDALRQLGCDIDYLGNEGFPPLRIGPAPLRl 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 160 SGAVSIDGSISSQFLTAFLMAAPLAEG-EVTIKIDGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPGDF 238
Cdd:PRK11860 161 DAPIRVRGDVSSQFLTALLMALPLVARrDITIEVVGELISKPYIEITLNLLARFGIAVQREGWQRFTIPAGSRYRSPGEI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 239 LVEGDASSASYFLAAAAIKGGE-IKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISR--CGELKGIDMDYNHIPDA 315
Cdd:PRK11860 241 HVEGDASSASYFIAAGAIAGGApVRIEGVGRDSIQGDIRFAEAARAMGAQVTSGPNWLEVRrgAWPLKAIDLDCNHIPDA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 316 AMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNP---VAELTHAAIDTYDDHRMAMCF 392
Cdd:PRK11860 321 AMTLAVMALYADGTTTLRNIASWRVKETDRIAAMATELRKLGATVEEGADYIRVTPpaqAADWKAAAIHTYDDHRMAMCF 400
|
410 420 430
....*....|....*....|....*....|.
gi 857999380 393 SLVAL--SDTPVTINDPGCTSKTFPDYFDKL 421
Cdd:PRK11860 401 SLAAFnpAGLPVRINDPKCVAKTFPDYFEAL 431
|
|
| EPSP_synthase |
cd01556 |
EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase ... |
12-424 |
0e+00 |
|
EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.
Pssm-ID: 238797 Cd Length: 409 Bit Score: 553.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 12 VNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLsaDKTVCEVTGVGGAFSSDKAlDLF 91
Cdd:cd01556 1 LSGEITVPGSKSISHRALLLAALAEGESRIENLLDSDDTLATLEALRALGAKIEE--EGGTVEIVGGGGLGLPPEA-VLD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 92 LGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLkITGTGLKSGAVSIDGSISS 171
Cdd:cd01556 78 CGNSGTTMRLLTGLLALQGGDSVLTGDESLRKRPMGRLVDALRQLGAEIEGREGGGYPPL-IGGGGLKGGEVEIPGAVSS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 172 QFLTAFLMAAPLAEGEVTIKIdGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPgDFLVEGDASSASYFL 251
Cdd:cd01556 157 QFKSALLLAAPLAEGPTTIII-GELESKPYIDHTERMLRAFGAEVEVDGYRTITVKGGQKYKGP-EYTVEGDASSAAFFL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 252 AAAAIKGGEIKVTGIGKNSiqGDIQFADALEKMGAEIEWGDDY--VISRCGELKGIDMDYNHIPDAAMTIATTALFAKGT 329
Cdd:cd01556 235 AAAAITGSEIVIKNVGLNS--GDTGIIDVLKEMGADIEIGNEDtvVVESGGKLKGIDIDGNDIPDEAPTLAVLAAFAEGP 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 330 TAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPV-AELTHAAIDTYDDHRMAMCFSLVAL-SDTPVTINDP 407
Cdd:cd01556 313 TRIRNAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGpLKGAGVEVYTYGDHRIAMSFAIAGLvAEGGVTIEDP 392
|
410
....*....|....*..
gi 857999380 408 GCTSKTFPDYFDKLKML 424
Cdd:cd01556 393 ECVAKSFPNFFEDLESL 409
|
|
| EPSP_synthase |
pfam00275 |
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); |
7-421 |
3.05e-174 |
|
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
Pssm-ID: 395213 Cd Length: 415 Bit Score: 493.35 E-value: 3.05e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 7 QPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVD-YQLSADKTVCEVTGVGGAFSSD 85
Cdd:pfam00275 1 TGGSRLSGEVKIPGSKSNSHRALILAALAAGESTITNLLDSDDTLTMLEALRALGAEiIKLDDEKSVVIVEGLGGSFEAP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 86 KALDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGtgLKSGAVSI 165
Cdd:pfam00275 81 EDLVLDMGNSGTALRPLTGRLALQSGEVVLPGDCSIGKRPMDRLLDALRQLGAEIEGREGYNYAPLKVRG--LRLGGIHI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 166 DGSISSQFLTAFLMAAP-LAEGEVTIKidgELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPGDFLVEGDA 244
Cdd:pfam00275 159 DGDVSSQFVTSLLMLAAlLAEGTTTIE---NLASEPYIDDTENMLKKFGAKIEGSGTELSITVKGGEKLPGQEYRVEGDR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 245 SSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCG-ELKGIDMDYNHIPDAAMTIATTA 323
Cdd:pfam00275 236 SSAAYFLVAAAITGGTVTVENVGINSLQGDEALLEILEKMGAEITQEEDADIVVGPpGLRGKAVDIRTAPDPAPTTAVLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 324 LFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVA-ELTHAAIDTYDDHRMAMCFSLVAL-SDTP 401
Cdd:pfam00275 316 AFAEGTTRIEGISELRVKETDRLFAMATELRRLGADVEELPDGLIIIPAVkELKGAEVDSYGDHRIAMALALAGLvAEGE 395
|
410 420
....*....|....*....|
gi 857999380 402 VTINDPGCTSKTFPDYFDKL 421
Cdd:pfam00275 396 TIIDDIECTDRSFPDFEEKL 415
|
|
| aroA |
TIGR01356 |
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents ... |
14-424 |
5.83e-167 |
|
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents 3-phosphoshikimate-1-carboxyvinyltransferase (aroA), which catalyzes the sixth of seven steps in the shikimate pathway of the biosynthesis of chorimate. Chorismate is last common precursor of all three aromatic amino acids. Sequences scoring between the trusted and noise cutoffs include fragmentary and aberrant sequences in which generally well-conserved motifs are missing or altererd, but no example of a protein known to have a different function. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 273574 Cd Length: 409 Bit Score: 474.84 E-value: 5.83e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 14 GEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVceVTGVGGAFSSDKaldLFLG 93
Cdd:TIGR01356 1 GEIRAPGSKSITHRALILAALAEGETRVRNLLRSEDTLATLDALRALGAKIEDGGEVAV--IEGVGGKEPQAE---LDLG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 94 NAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGtGLKSGAVSIDGSISSQF 173
Cdd:TIGR01356 76 NSGTTARLLTGVLALADGEVVLTGDESLRKRPMGRLVDALRQLGAEISSLEGGGSLPLTISG-PLPGGIVYISGSASSQY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 174 LTAFLMAAPlAEGEVTIKIDGE-LVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYsAPGDFLVEGDASSASYFLA 252
Cdd:TIGR01356 155 KSALLLAAP-ALQAVGITIVGEpLKSRPYIEITLDLLGSFGVEVERSDGRKIVVPGGQKY-GPQGYDVPGDYSSAAFFLA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 253 AAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCG-ELKGIDMDYNHIPDAAMTIATTALFAKGTTA 331
Cdd:TIGR01356 233 AAAITGGRVTLENLGINPTQGDKAIIIVLEEMGADIEVEEDDLIVEGAsGLKGIKIDMDDMIDELPTLAVLAAFAEGVTR 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 332 IRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVAL-SDTPVTINDPGCT 410
Cdd:TIGR01356 313 ITGAEELRVKESDRIAAIAEELRKLGVDVEEFEDGLYIRGKKELKGAVVDTFGDHRIAMAFAVAGLvAEGEVLIDDPECV 392
|
410
....*....|....
gi 857999380 411 SKTFPDYFDKLKML 424
Cdd:TIGR01356 393 AKSFPSFFDVLERL 406
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| AroA |
COG0128 |
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; ... |
1-424 |
0e+00 |
|
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; 5-enolpyruvylshikimate-3-phosphate synthase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis
Pssm-ID: 439898 Cd Length: 421 Bit Score: 626.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVcEVTGVGG 80
Cdd:COG0128 1 MSSLTIAPPSPLKGTVRVPGSKSISHRALLLAALAEGESTIRNLLESDDTLATLEALRALGAEIEELDGGTL-RVTGVGG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKAlDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENeNYPPLKITGTGLKS 160
Cdd:COG0128 80 GLKEPDA-VLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQLGARIESRGG-GYLPLTIRGGPLKG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 161 GAVSIDGSISSQFLTAFLMAAPLAEGEVTIKIDGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSaPGDFLV 240
Cdd:COG0128 158 GEYEIPGSASSQFKSALLLAGPLAEGGLEITVTGELESKPYRDHTERMLRAFGVEVEVEGYRRFTVPGGQRYR-PGDYTV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 241 EGDASSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCGELKGIDMDYNHIPDAAMTIA 320
Cdd:COG0128 237 PGDISSAAFFLAAAAITGSEVTVEGVGLNSTQGDTGILDILKEMGADIEIENDGITVRGSPLKGIDIDLSDIPDEAPTLA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 321 TTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVAL-SD 399
Cdd:COG0128 317 VLAAFAEGTTRIRGAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGPKLKGAEVDSYGDHRIAMAFAVAGLrAE 396
|
410 420
....*....|....*....|....*
gi 857999380 400 TPVTINDPGCTSKTFPDYFDKLKML 424
Cdd:COG0128 397 GPVTIDDAECVAKSFPDFFELLESL 421
|
|
| PRK11860 |
PRK11860 |
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase; |
1-421 |
0e+00 |
|
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;
Pssm-ID: 237003 [Multi-domain] Cd Length: 661 Bit Score: 612.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVceVTGVGG 80
Cdd:PRK11860 4 TEFLDLPPLLSAGGTVRLPGSKSISNRVLLLAALSEGTTTVRDLLDSDDTRVMLDALRALGCGVEQLGDTYR--ITGLGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKAlDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGTGLK- 159
Cdd:PRK11860 82 QFPVKQA-DLFLGNAGTAMRPLTAALALLGGEYELSGVPRMHERPIGDLVDALRQLGCDIDYLGNEGFPPLRIGPAPLRl 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 160 SGAVSIDGSISSQFLTAFLMAAPLAEG-EVTIKIDGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPGDF 238
Cdd:PRK11860 161 DAPIRVRGDVSSQFLTALLMALPLVARrDITIEVVGELISKPYIEITLNLLARFGIAVQREGWQRFTIPAGSRYRSPGEI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 239 LVEGDASSASYFLAAAAIKGGE-IKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISR--CGELKGIDMDYNHIPDA 315
Cdd:PRK11860 241 HVEGDASSASYFIAAGAIAGGApVRIEGVGRDSIQGDIRFAEAARAMGAQVTSGPNWLEVRrgAWPLKAIDLDCNHIPDA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 316 AMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNP---VAELTHAAIDTYDDHRMAMCF 392
Cdd:PRK11860 321 AMTLAVMALYADGTTTLRNIASWRVKETDRIAAMATELRKLGATVEEGADYIRVTPpaqAADWKAAAIHTYDDHRMAMCF 400
|
410 420 430
....*....|....*....|....*....|.
gi 857999380 393 SLVAL--SDTPVTINDPGCTSKTFPDYFDKL 421
Cdd:PRK11860 401 SLAAFnpAGLPVRINDPKCVAKTFPDYFEAL 431
|
|
| PRK02427 |
PRK02427 |
3-phosphoshikimate 1-carboxyvinyltransferase; Provisional |
1-425 |
0e+00 |
|
3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Pssm-ID: 235037 [Multi-domain] Cd Length: 435 Bit Score: 602.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYqlsaDKTVCEVTGVGG 80
Cdd:PRK02427 2 MMMLLIIPPSPLSGTVRVPGSKSISHRALLLAALAEGETTITNLLRSEDTLATLNALRALGVEI----EDDEVVVEGVGG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKALDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYlENENYPPLKITGtGLKS 160
Cdd:PRK02427 78 GGLKEPEDVLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQMGAKIEG-RDEGYLPLTIRG-GKKG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 161 GAVSIDGSISSQFLTAFLMAAPL-AEGEVTIKIDGELVSKPYIDITLHIMKQFGVDVINND---YQEFVIPTGQSYsAPG 236
Cdd:PRK02427 156 GPIEYDGPVSSQFVKSLLLLAPLfAEGDTETTVIEPLPSRPHTEITLRMLRAFGVEVENVEgwgYRRIVIKGGQRL-RGQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 237 DFLVEGDASSASYFLAAAAIKGG-EIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDY--------VISRCGELKGIDM 307
Cdd:PRK02427 235 DITVPGDPSSAAFFLAAAAITGGsEVTITNVGLNSTQGGKAIIDVLEKMGADIEIENEReggepvgdIRVRSSELKGIDI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 308 DYNHIPDAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAelTHAAIDTYDDHR 387
Cdd:PRK02427 315 DIPDIIDEAPTLAVLAAFAEGTTVIRNAEELRVKETDRIAAMATELRKLGAEVEETEDGLIITGGP--LAGVVDSYGDHR 392
|
410 420 430
....*....|....*....|....*....|....*....
gi 857999380 388 MAMCFSLVAL-SDTPVTINDPGCTSKTFPDYFDKLKMLS 425
Cdd:PRK02427 393 IAMAFAIAGLaAEGPVTIDDPECVAKSFPDFFEDLASLG 431
|
|
| PLN02338 |
PLN02338 |
3-phosphoshikimate 1-carboxyvinyltransferase |
1-425 |
0e+00 |
|
3-phosphoshikimate 1-carboxyvinyltransferase
Pssm-ID: 177972 [Multi-domain] Cd Length: 443 Bit Score: 574.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVCEVTGVGG 80
Cdd:PLN02338 1 AEEITLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLDSDDIRYMLGALKTLGLNVEEDSENNRAVVEGCGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKA----LDLFLGNAGTAMRPLAAALCL--GRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKIT 154
Cdd:PLN02338 81 KFPVSGDskedVELFLGNAGTAMRPLTAAVTAagGNASYVLDGVPRMRERPIGDLVDGLKQLGADVECTLGTNCPPVRVN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 155 GT-GLKSGAVSIDGSISSQFLTAFLMAAPLAEGEVTIKIDGELVSKPYIDITLHIMKQFGVDV-INNDYQEFVIPTGQSY 232
Cdd:PLN02338 161 AAgGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVeHSDSWDRFFIKGGQKY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 233 SAPGDFLVEGDASSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYV--------ISRCGELKG 304
Cdd:PLN02338 241 KSPGNAYVEGDASSASYFLAGAAITGGTVTVEGCGTTSLQGDVKFAEVLEKMGAKVEWTENSVtvtgpprdAFGGKHLKA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 305 IDMDYNHIPDAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYD 384
Cdd:PLN02338 321 IDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCIITPPKKLKPAEIDTYD 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 857999380 385 DHRMAMCFSLVALSDTPVTINDPGCTSKTFPDYFDKLKMLS 425
Cdd:PLN02338 401 DHRMAMAFSLAACGDVPVTINDPGCTRKTFPTYFDVLESIA 441
|
|
| EPSP_synthase |
cd01556 |
EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase ... |
12-424 |
0e+00 |
|
EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.
Pssm-ID: 238797 Cd Length: 409 Bit Score: 553.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 12 VNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLsaDKTVCEVTGVGGAFSSDKAlDLF 91
Cdd:cd01556 1 LSGEITVPGSKSISHRALLLAALAEGESRIENLLDSDDTLATLEALRALGAKIEE--EGGTVEIVGGGGLGLPPEA-VLD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 92 LGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLkITGTGLKSGAVSIDGSISS 171
Cdd:cd01556 78 CGNSGTTMRLLTGLLALQGGDSVLTGDESLRKRPMGRLVDALRQLGAEIEGREGGGYPPL-IGGGGLKGGEVEIPGAVSS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 172 QFLTAFLMAAPLAEGEVTIKIdGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPgDFLVEGDASSASYFL 251
Cdd:cd01556 157 QFKSALLLAAPLAEGPTTIII-GELESKPYIDHTERMLRAFGAEVEVDGYRTITVKGGQKYKGP-EYTVEGDASSAAFFL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 252 AAAAIKGGEIKVTGIGKNSiqGDIQFADALEKMGAEIEWGDDY--VISRCGELKGIDMDYNHIPDAAMTIATTALFAKGT 329
Cdd:cd01556 235 AAAAITGSEIVIKNVGLNS--GDTGIIDVLKEMGADIEIGNEDtvVVESGGKLKGIDIDGNDIPDEAPTLAVLAAFAEGP 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 330 TAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPV-AELTHAAIDTYDDHRMAMCFSLVAL-SDTPVTINDP 407
Cdd:cd01556 313 TRIRNAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGpLKGAGVEVYTYGDHRIAMSFAIAGLvAEGGVTIEDP 392
|
410
....*....|....*..
gi 857999380 408 GCTSKTFPDYFDKLKML 424
Cdd:cd01556 393 ECVAKSFPNFFEDLESL 409
|
|
| EPSP_synthase |
pfam00275 |
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); |
7-421 |
3.05e-174 |
|
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
Pssm-ID: 395213 Cd Length: 415 Bit Score: 493.35 E-value: 3.05e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 7 QPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVD-YQLSADKTVCEVTGVGGAFSSD 85
Cdd:pfam00275 1 TGGSRLSGEVKIPGSKSNSHRALILAALAAGESTITNLLDSDDTLTMLEALRALGAEiIKLDDEKSVVIVEGLGGSFEAP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 86 KALDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGtgLKSGAVSI 165
Cdd:pfam00275 81 EDLVLDMGNSGTALRPLTGRLALQSGEVVLPGDCSIGKRPMDRLLDALRQLGAEIEGREGYNYAPLKVRG--LRLGGIHI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 166 DGSISSQFLTAFLMAAP-LAEGEVTIKidgELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPGDFLVEGDA 244
Cdd:pfam00275 159 DGDVSSQFVTSLLMLAAlLAEGTTTIE---NLASEPYIDDTENMLKKFGAKIEGSGTELSITVKGGEKLPGQEYRVEGDR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 245 SSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCG-ELKGIDMDYNHIPDAAMTIATTA 323
Cdd:pfam00275 236 SSAAYFLVAAAITGGTVTVENVGINSLQGDEALLEILEKMGAEITQEEDADIVVGPpGLRGKAVDIRTAPDPAPTTAVLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 324 LFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVA-ELTHAAIDTYDDHRMAMCFSLVAL-SDTP 401
Cdd:pfam00275 316 AFAEGTTRIEGISELRVKETDRLFAMATELRRLGADVEELPDGLIIIPAVkELKGAEVDSYGDHRIAMALALAGLvAEGE 395
|
410 420
....*....|....*....|
gi 857999380 402 VTINDPGCTSKTFPDYFDKL 421
Cdd:pfam00275 396 TIIDDIECTDRSFPDFEEKL 415
|
|
| aroA |
TIGR01356 |
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents ... |
14-424 |
5.83e-167 |
|
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents 3-phosphoshikimate-1-carboxyvinyltransferase (aroA), which catalyzes the sixth of seven steps in the shikimate pathway of the biosynthesis of chorimate. Chorismate is last common precursor of all three aromatic amino acids. Sequences scoring between the trusted and noise cutoffs include fragmentary and aberrant sequences in which generally well-conserved motifs are missing or altererd, but no example of a protein known to have a different function. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 273574 Cd Length: 409 Bit Score: 474.84 E-value: 5.83e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 14 GEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVceVTGVGGAFSSDKaldLFLG 93
Cdd:TIGR01356 1 GEIRAPGSKSITHRALILAALAEGETRVRNLLRSEDTLATLDALRALGAKIEDGGEVAV--IEGVGGKEPQAE---LDLG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 94 NAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGtGLKSGAVSIDGSISSQF 173
Cdd:TIGR01356 76 NSGTTARLLTGVLALADGEVVLTGDESLRKRPMGRLVDALRQLGAEISSLEGGGSLPLTISG-PLPGGIVYISGSASSQY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 174 LTAFLMAAPlAEGEVTIKIDGE-LVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYsAPGDFLVEGDASSASYFLA 252
Cdd:TIGR01356 155 KSALLLAAP-ALQAVGITIVGEpLKSRPYIEITLDLLGSFGVEVERSDGRKIVVPGGQKY-GPQGYDVPGDYSSAAFFLA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 253 AAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRCG-ELKGIDMDYNHIPDAAMTIATTALFAKGTTA 331
Cdd:TIGR01356 233 AAAITGGRVTLENLGINPTQGDKAIIIVLEEMGADIEVEEDDLIVEGAsGLKGIKIDMDDMIDELPTLAVLAAFAEGVTR 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 332 IRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVAL-SDTPVTINDPGCT 410
Cdd:TIGR01356 313 ITGAEELRVKESDRIAAIAEELRKLGVDVEEFEDGLYIRGKKELKGAVVDTFGDHRIAMAFAVAGLvAEGEVLIDDPECV 392
|
410
....*....|....
gi 857999380 411 SKTFPDYFDKLKML 424
Cdd:TIGR01356 393 AKSFPSFFDVLERL 406
|
|
| PRK11861 |
PRK11861 |
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional |
1-425 |
1.28e-165 |
|
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Pssm-ID: 183343 [Multi-domain] Cd Length: 673 Bit Score: 481.13 E-value: 1.28e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVdyQLSADKTVCEVTGVGG 80
Cdd:PRK11861 240 MEHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGV--KLSRDGGTCVVGGTRG 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSdKALDLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKITGTGLKS 160
Cdd:PRK11861 318 AFTA-KTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISV 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 161 GA-VSIDGSISSQFLTAFLMAAPLA---EGEVTIKIDGELVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPG 236
Cdd:PRK11861 397 DApIRVRGDVSSQFLTALLMTLPLVkakDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPG 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 237 DFLVEGDASSASYFLAAAAIKGGEIKVTGIGKNSIQGDIQFADALEKMGAEIEWGDDYVISRC-----GELKGIDMDYNH 311
Cdd:PRK11861 477 TIMVEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGighdhGRLAPIDMDFNL 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 312 IPDAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELT-HAAIDTYDDHRMAM 390
Cdd:PRK11861 557 IPDAAMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTpNASIDTYDDHRMAM 636
|
410 420 430
....*....|....*....|....*....|....*
gi 857999380 391 CFSLVALSDTPVTINDPGCTSKTFPDYFDKLKMLS 425
Cdd:PRK11861 637 CFSLVSLGGVPVRINDPKCVGKTFPDYFDRFLALA 671
|
|
| EPT-like |
cd01554 |
Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine ... |
12-424 |
2.44e-164 |
|
Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase. Both enzymes catalyze the reaction of enolpyruvyl transfer.
Pssm-ID: 238795 Cd Length: 408 Bit Score: 468.24 E-value: 2.44e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 12 VNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSAdkTVCEVTGVGGAFSSDKALDLF 91
Cdd:cd01554 1 LHGIIRVPGDKSISHRSLIFASLAEGETKVYNILRGEDVLSTMQVLRDLGVEIEDKD--GVITIQGVGMAGLKAPQNALN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 92 LGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLENENYPPLKItGTGLKSGAVSIDGSISS 171
Cdd:cd01554 79 LGNSGTAIRLISGVLAGADFEVELFGDDSLSKRPMDRVTLPLKKMGASISGQEERDLPPLLK-GGKNLGPIHYEDPIASA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 172 QFLTAFLMAAPLAEGEVTIKIDgelVSKPYIDITLHIMKQFGVDVINNDYQEFVIPTGQSYSAPgDFLVEGDASSASYFL 251
Cdd:cd01554 158 QVKSALMFAALLAKGETVIIEA---AKEPTINHTENMLQTFGGHISVQGTKKIVVQGPQKLTGQ-KYVVPGDISSAAFFL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 252 AAAAIKGGEIKVTGIGKNSiqGDIQFADALEKMGAEIEWGDDYVISRCGELKGIDMDYNHIP---DAAMTIATTALFAKG 328
Cdd:cd01554 234 VAAAIAPGRLVLQNVGINE--TRTGIIDVLRAMGAKIEIGEDTISVESSDLKATEICGALIPrliDELPIIALLALQAQG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 329 TTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVAL-SDTPVTINDP 407
Cdd:cd01554 312 TTVIKDAEELKVKETDRIFVVADELNSMGADIEPTADGMIIKGKEKLHGARVNTFGDHRIGMMTALAALvADGEVELDRA 391
|
410
....*....|....*..
gi 857999380 408 GCTSKTFPDYFDKLKML 424
Cdd:cd01554 392 EAINTSYPSFFDDLESL 408
|
|
| EPT_RTPC-like |
cd01553 |
This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate ... |
241-424 |
2.00e-49 |
|
This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC). These 2 families differ in that EPT is formed by 3 repeats of an alpha-beta structural domain while RTPC has 3 similar repeats with a 4th slightly different domain inserted between the 2nd and 3rd repeat. They evidently share the same active site location, although the catalytic residues differ.
Pssm-ID: 238794 Cd Length: 211 Bit Score: 167.07 E-value: 2.00e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 241 EGDASSASYFLAAAAIKGGEIKVTGIGKNS-----IQGDIQFADALEKM-GAEIEWG---DDYVISRCGELKGIDMDYNH 311
Cdd:cd01553 7 KGGGQILRSFLVLAAISGGPITVTGIRPDRakpglLRQHLTFLKALEKIcGATVEGGelgSDRISFRPGTVRGGDVRFAI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 312 -----IPDAAMTIATTALFAKGTTAIRNVYNWRV----KETDRLAAMATELRKVGAEVEEGED------------YIIVN 370
Cdd:cd01553 87 gsagsCTDVLQTILPLLLFAKGPTRLTVTGGTDNpsapPADFIRFVLEPELAKIGAHQEETLLrhgfypagggvvATEVS 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 857999380 371 PVAELTHAAIdtyddhRMAMCFSLVAlsdTPVTINDPGCTSKTFPDYFDKLKML 424
Cdd:cd01553 167 PVEKLNTAQL------RQLVLPMLLA---SGAVEFTVAHPSCHLLTNFAVLEAL 211
|
|
| PRK14806 |
PRK14806 |
bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; ... |
3-417 |
8.44e-49 |
|
bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Pssm-ID: 237820 [Multi-domain] Cd Length: 735 Bit Score: 177.11 E-value: 8.44e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 3 SLTLQPIQKVNGEVNLPGSKSVSNRALLLAALSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVcEVTGVG--G 80
Cdd:PRK14806 303 SYSVLPGGAVKGTIRVPGDKSISHRSIMLGSLAEGVTEVEGFLEGEDALATLQAFRDMGVVIEGPHNGRV-TIHGVGlhG 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKAldLFLGNAGTAMRPLAAALCLGRGEYVLTGEPRMKERPIGHLVTALREAGADVEYLEnENYPPLKITGtGLKS 160
Cdd:PRK14806 382 LKAPPGP--LYMGNSGTSMRLLSGLLAAQSFDSVLTGDASLSKRPMERVAKPLREMGAVIETGE-EGRPPLSIRG-GQRL 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 161 GAVSIDGSI-SSQFLTAFLMAAPLAEGEVTIKidgELvsKPYIDITLHIMKQFGVDViNNDYQEFVIPTGQSYSApGDFL 239
Cdd:PRK14806 458 KGIHYDLPMaSAQVKSCLLLAGLYAEGETSVT---EP--APTRDHTERMLRGFGYPV-KVEGNTISVEGGGKLTA-TDIE 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 240 VEGDASSASYFLAAAAI-KGGEIKVTGIGKNSIQgdIQFADALEKMGAEIEWGDDYVIS---------RCGELKGIDMDY 309
Cdd:PRK14806 531 VPADISSAAFFLVAASIaEGSELTLEHVGINPTR--TGVIDILKLMGADITLENEREVGgepvadirvRGARLKGIDIPE 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 310 NHIPDA-----AMTIAttALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPvAELTHAAIDTYD 384
Cdd:PRK14806 609 DQVPLAidefpVLFVA--AACAEGRTVLTGAEELRVKESDRIQVMADGLKTLGIDCEPTPDGIIIEG-GIFGGGEVESHG 685
|
410 420 430
....*....|....*....|....*....|....
gi 857999380 385 DHRMAMCFSLVAL-SDTPVTINDPGCTSKTFPDY 417
Cdd:PRK14806 686 DHRIAMSFSVASLrASGPITIHDCANVATSFPNF 719
|
|
| MurA |
COG0766 |
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; ... |
1-376 |
3.71e-19 |
|
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylglucosamine enolpyruvyl transferase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440529 Cd Length: 416 Bit Score: 88.89 E-value: 3.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKsvsNRAL-LLAA--LSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVcEVTG 77
Cdd:COG0766 1 MDKLIIEGGKPLSGEVRISGAK---NAALpILAAalLTDGPVTLRNVPDLSDVRTMLELLESLGVKVERDDGGTL-TIDA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 78 vgGAFSSDKA-LDLflgnaGTAMRplAAALCLGrgeyVLTGepRMKE-------------RPIG-HLvTALREAGADVEY 142
Cdd:COG0766 77 --SNINSTEApYEL-----VRKMR--ASILVLG----PLLA--RFGEarvslpggcaigaRPIDlHL-KGLEALGAEIEI 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 143 lENENYpplKITGTGLKSGAVSIDgsISSqfLTA---FLMAAPLAEGEVTI---------------------KIDGELVS 198
Cdd:COG0766 141 -EHGYI---EARAGRLKGARIYLD--FPS--VGAtenIMMAAVLAEGTTVIenaarepeivdlanflnamgaKIEGAGTD 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 199 kpyidiTLHImkqFGVDVINndyqefviptGQSYSAPGDFLVegdassASYFLAAAAIKGGEIKVTGIgknsIQGDIQ-F 277
Cdd:COG0766 213 ------TITI---EGVEKLH----------GAEHTVIPDRIE------AGTFLVAAAITGGDVTVKNV----IPEHLEaV 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 278 ADALEKMGAEIEWGDDYV-ISRCGELKGID---MDYNHIP-D---AAMTIATTalfAKGTTAIR-NVYNWRVKETDrlaa 348
Cdd:COG0766 264 LAKLREAGVEIEEGDDGIrVRGPGRLKAVDiktAPYPGFPtDlqaQFMALLTQ---AEGTSVITeTVFENRFMHVD---- 336
|
410 420
....*....|....*....|....*....
gi 857999380 349 matELRKVGAEVE-EGeDYIIVNPVAELT 376
Cdd:COG0766 337 ---ELNRMGADIKlDG-HTAIVRGVTKLS 361
|
|
| UdpNAET |
cd01555 |
UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the ... |
13-397 |
1.38e-14 |
|
UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.
Pssm-ID: 238796 Cd Length: 400 Bit Score: 74.82 E-value: 1.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 13 NGEVNLPGSKsvsNRAL-LLAA--LSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTV---------CEVTGvgG 80
Cdd:cd01555 2 SGEVRISGAK---NAALpILAAalLTDEPVTLRNVPDLLDVETMIELLRSLGAKVEFEGENTLvidasninsTEAPY--E 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 81 AFSSDKALDLFLGnagtamrPLAAALclGRGEYVLTGEPRMKERPIG-HLVtALREAGADVEyLENENYppLKITGTGLK 159
Cdd:cd01555 77 LVRKMRASILVLG-------PLLARF--GEARVSLPGGCAIGARPVDlHLK-GLEALGAKIE-IEDGYV--EAKAAGRLK 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 160 sGA------VSIDGSISSqfltafLMAAPLAEGEVTI---------------------KIDGelVSKPYIDITlhimkqf 212
Cdd:cd01555 144 -GAriyldfPSVGATENI------MMAAVLAEGTTVIenaarepeivdlanflnkmgaKIEG--AGTDTIRIE------- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 213 GVDVInndyqefvipTGQSYSAPGDFLVEGDassasyFLAAAAIKGGEIKVTGIGKNSIqgdIQFADALEKMGAEIEWGD 292
Cdd:cd01555 208 GVERL----------HGAEHTVIPDRIEAGT------FLVAAAITGGDITVENVIPEHL---EAVLAKLREMGAKIEIGE 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 293 D--YVISRCGELKGIDMDYNHIP----DAAMTIATTALFAKGTTAIR-NVYNWRVKETDrlaamatELRKVGAEVEEGED 365
Cdd:cd01555 269 DgiRVDGDGGRLKAVDIETAPYPgfptDLQAQFMALLTQAEGTSVITeTIFENRFMHVD-------ELNRMGADIKVEGN 341
|
410 420 430
....*....|....*....|....*....|..
gi 857999380 366 YIIVNPVAELTHAAIDTyDDHRMAMCFSLVAL 397
Cdd:cd01555 342 TAIIRGVTKLSGAPVMA-TDLRAGAALVLAGL 372
|
|
| MurA |
COG0766 |
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; ... |
178-380 |
1.28e-10 |
|
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylglucosamine enolpyruvyl transferase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440529 Cd Length: 416 Bit Score: 62.70 E-value: 1.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 178 LMAAPLAEGEVTIK-----IDgelvskpyIDITLHIMKQFGVDVINNDYQEFVIPTGQ--SYSAPGDFlvegdASS--AS 248
Cdd:COG0766 29 LAAALLTDGPVTLRnvpdlSD--------VRTMLELLESLGVKVERDDGGTLTIDASNinSTEAPYEL-----VRKmrAS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 249 YFLAAAAI-KGGEIKVT---G--IGKNSIqgDIQFaDALEKMGAEIEWGDDYVISRCGELKG--IDMDY-------Nhip 313
Cdd:COG0766 96 ILVLGPLLaRFGEARVSlpgGcaIGARPI--DLHL-KGLEALGAEIEIEHGYIEARAGRLKGarIYLDFpsvgateN--- 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 857999380 314 daAMTIATtalFAKGTTAIRNVYnwrvKE---TDrLAAMateLRKVGAEVE-EGEDYIIVNPVAEL---THAAI 380
Cdd:COG0766 170 --IMMAAV---LAEGTTVIENAA----REpeiVD-LANF---LNAMGAKIEgAGTDTITIEGVEKLhgaEHTVI 230
|
|
| PRK09369 |
PRK09369 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated |
1-306 |
1.50e-10 |
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated
Pssm-ID: 236486 Cd Length: 417 Bit Score: 62.74 E-value: 1.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKsvsNRAL-LLAA--LSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVcevtg 77
Cdd:PRK09369 1 MDKLVIEGGKPLSGEVTISGAK---NAALpILAAslLAEEPVTLTNVPDLSDVRTMIELLRSLGAKVEFDGNGTV----- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 78 vggAFSSDKALD---------------LFLGnagtamrPLAAALclGRGEYVLTGEPRMKERPIG-HLvTALREAGADVE 141
Cdd:PRK09369 73 ---TIDASNINNteapyelvkkmrasiLVLG-------PLLARF--GEAKVSLPGGCAIGARPVDlHL-KGLEALGAEIE 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 142 ylENENYPPLKITGtGLKsGA------VSIDGSISsqfltaFLMAAPLAEGEVTI---------------------KIDG 194
Cdd:PRK09369 140 --IEHGYVEAKADG-RLK-GAhivldfPSVGATEN------ILMAAVLAEGTTVIenaarepeivdlanflnkmgaKISG 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 195 ELVSkpyidiTLHImkqFGVDVINndyqefviptGQSYSAPGDFLVEGDassasyFLAAAAIKGGEIKVTGIgknsIQGD 274
Cdd:PRK09369 210 AGTD------TITI---EGVERLH----------GAEHTVIPDRIEAGT------FLVAAAITGGDVTIRGA----RPEH 260
|
330 340 350
....*....|....*....|....*....|....
gi 857999380 275 IQ-FADALEKMGAEIEWGDDYV-ISRCGELKGID 306
Cdd:PRK09369 261 LEaVLAKLREAGAEIEEGEDGIrVDMPGRLKAVD 294
|
|
| PRK12830 |
PRK12830 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed |
1-378 |
7.90e-09 |
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed
Pssm-ID: 183779 Cd Length: 417 Bit Score: 57.17 E-value: 7.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 1 MESLTLQPIQKVNGEVNLPGSKSvSNRALLLAA-LSTGTTRLTNLLDSDDIRHMLNALTQLGVDYQLSADKTVCEVTGV- 78
Cdd:PRK12830 1 MEKIVINGGKPLSGEVTISGAKN-SAVALIPAAiLADGPVTLDGVPDISDVHSLVDILEELGGKVKRDGDTLEIDPTGIq 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 79 -----GGAFSSDKALDLFLGnagtAMrplaaalcLGR-GEYV--LTGEPRMKERPIGHLVTALREAGADVEYlENENypp 150
Cdd:PRK12830 80 smplpNGKVKSLRASYYFMG----AL--------LGRfKKAVvgLPGGCDLGPRPIDQHIKGFEALGAEVTN-EGGA--- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 151 LKITGTGLKsGA------VSIDGSISsqfltaFLMAAPLAEGEVTIkidgELVSK-PYI-DI-TL------HImKQFGVD 215
Cdd:PRK12830 144 IYLKADELK-GAhiyldvVSVGATIN------IMLAAVKAKGRTVI----ENAAKePEIiDVaTLlnnmgaNI-KGAGTD 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 216 VIN---------NDYQefVIPtgqsysapgdflvegDASSASYFLAAAAIKGGEIKVTGIGKNSIQGdiqFADALEKMGA 286
Cdd:PRK12830 212 VIRiegvdelhgCRHT--VIP---------------DRIEAGTYMILAAACGGGVTINNVIPEHLES---FIAKLEEMGV 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 287 EIEWGDDYV-ISRCGELKGID---MDYNHIP-DAAMTIATTALFAKGTTAIR-NVYNWRVKETDrlaamatELRKVGAEV 360
Cdd:PRK12830 272 RVEVNEDSIfVEKQGNLKAVDiktLPYPGFAtDLQQPLTPLLLKANGRSVVTdTIYEKRFKHVD-------ELKRMGANI 344
|
410
....*....|....*...
gi 857999380 361 EEGEDYIIVNPVAELTHA 378
Cdd:PRK12830 345 KVEGRSAIITGPSKLTGA 362
|
|
| PRK09369 |
PRK09369 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated |
178-380 |
7.46e-08 |
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated
Pssm-ID: 236486 Cd Length: 417 Bit Score: 54.27 E-value: 7.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 178 LMAAPLAEGEVTIK-----IDgelvskpyIDITLHIMKQFGVDVINNDYQEFVIPTGQ--SYSAPGDfLVegDASSASYF 250
Cdd:PRK09369 29 LAASLLAEEPVTLTnvpdlSD--------VRTMIELLRSLGAKVEFDGNGTVTIDASNinNTEAPYE-LV--KKMRASIL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 857999380 251 LAAAAI-KGGEIKVT---G--IGKNSIqgDIQFaDALEKMGAEIEWGDDYVISRC-GELKG--IDMDYnhiPD--AAMTI 319
Cdd:PRK09369 98 VLGPLLaRFGEAKVSlpgGcaIGARPV--DLHL-KGLEALGAEIEIEHGYVEAKAdGRLKGahIVLDF---PSvgATENI 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 857999380 320 ATTALFAKGTTAIRNVynwrVKE---TDrLAAMateLRKVGAEVE-EGEDYIIVNPVAEL---THAAI 380
Cdd:PRK09369 172 LMAAVLAEGTTVIENA----AREpeiVD-LANF---LNKMGAKISgAGTDTITIEGVERLhgaEHTVI 231
|
|
|