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Conserved domains on  [gi|1206269424|emb|CRI06734|]
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conserved protein of unknown function (plasmid) [Carnobacterium maltaromaticum]

Protein Classification

superinfection immunity protein( domain architecture ID 10627383)

superinfection immunity protein such as Escherichia virus T4 immunity protein that inhibits the DNA ejection of T4 into the host cytoplasm, thereby excluding superinfection by the phages of the same family

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Imm_superinfect pfam14373
Superinfection immunity protein; This family includes the E. coli bacteriophage T4 ...
 22-57 2.99e-11

Superinfection immunity protein; This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected with two T-even type bacteriophage the DNA of the superinfecting phage is excluded from the host, into the periplasmic space. The immunity protein plays a role in this process.


:

Pssm-ID: 464156  Cd Length: 42  Bit Score: 53.73  E-value: 2.99e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1206269424  22 IYFLPTLVA---RKENKGGVFVLNLFLGWTLFGWVLAMY 57
Cdd:pfam14373   1 LYFLPSIIAwarGHSNRLAIALLNLLLGWTVIGWIAALI 39
 
Name Accession Description Interval E-value
Imm_superinfect pfam14373
Superinfection immunity protein; This family includes the E. coli bacteriophage T4 ...
 22-57 2.99e-11

Superinfection immunity protein; This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected with two T-even type bacteriophage the DNA of the superinfecting phage is excluded from the host, into the periplasmic space. The immunity protein plays a role in this process.


Pssm-ID: 464156  Cd Length: 42  Bit Score: 53.73  E-value: 2.99e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1206269424  22 IYFLPTLVA---RKENKGGVFVLNLFLGWTLFGWVLAMY 57
Cdd:pfam14373   1 LYFLPSIIAwarGHSNRLAIALLNLLLGWTVIGWIAALI 39
 
Name Accession Description Interval E-value
Imm_superinfect pfam14373
Superinfection immunity protein; This family includes the E. coli bacteriophage T4 ...
 22-57 2.99e-11

Superinfection immunity protein; This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected with two T-even type bacteriophage the DNA of the superinfecting phage is excluded from the host, into the periplasmic space. The immunity protein plays a role in this process.


Pssm-ID: 464156  Cd Length: 42  Bit Score: 53.73  E-value: 2.99e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1206269424  22 IYFLPTLVA---RKENKGGVFVLNLFLGWTLFGWVLAMY 57
Cdd:pfam14373   1 LYFLPSIIAwarGHSNRLAIALLNLLLGWTVIGWIAALI 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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