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Conserved domains on  [gi|977512737|emb|CVC51087|]
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Maltose transport system permease protein malG [Serratia marcescens]

Protein Classification

maltose ABC transporter permease MalG( domain architecture ID 10793519)

maltose ABC transporter permease MalG is part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


:

Pssm-ID: 182891  Cd Length: 296  Bit Score: 566.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   1 MAMVQPKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNFATGSLIPETLSWDHWRLALGFSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  81 VLLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 161 GVIFAYMGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 977512737 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 566.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   1 MAMVQPKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNFATGSLIPETLSWDHWRLALGFSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  81 VLLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 161 GVIFAYMGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 977512737 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 2.47e-117

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 338.66  E-value: 2.47e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   3 MVQPKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNF-ATGSLIPETLSWDHWRLALGfsvthadgsvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  82 LLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 162 VIFAYM-GDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLgGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 977512737 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 4.48e-18

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 80.02  E-value: 4.48e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 165 AYMGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 977512737 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 1.12e-07

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 51.97  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthgg 161
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  162 VIFAYMG--------DIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 977512737  234 SLLLRDVNSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITAVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 112-286 4.01e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.52  E-value: 4.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  112 RMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYMGDIALHVWTIKGYFETIDNSLEEA 191
Cdd:pfam00528  11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  192 AALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGdfAAAAVLSA 271
Cdd:pfam00528  86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALIL 163

                         170
                  ....*....|....*
gi 977512737  272 IPITAVFLLAQRWLV 286
Cdd:pfam00528 164 LLLNLLVDILQRLLD 178
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 566.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   1 MAMVQPKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNFATGSLIPETLSWDHWRLALGFSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  81 VLLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 161 GVIFAYMGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 977512737 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 2.47e-117

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 338.66  E-value: 2.47e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   3 MVQPKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNF-ATGSLIPETLSWDHWRLALGfsvthadgsvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  82 LLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 162 VIFAYM-GDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLgGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 977512737 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 6-296 5.41e-71

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 220.74  E-value: 5.41e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   6 PKSQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGN--FATG-SLIPETLSWDHWRLALGFSvthadgsvtpppfPVL 82
Cdd:COG0395    7 RRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAeiFSGPpSLLPSEFTLENYRAAFTDG-------------PFG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  83 LWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGGV 162
Cdd:COG0395   74 RYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGL------LNTYWGL 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 163 IFAYMG-DIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVN 241
Cdd:COG0395  148 ILPYLAfGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPD 227

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 977512737 242 SYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG0395  228 LRTLPVGLASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 8-285 3.37e-28

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 109.05  E-value: 3.37e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   8 SQRLRLWITHILMLCFIALIMFPLLMVVAISLRSGNFATgsLIPETLSWDHWRLALgfsvthADGSVTPPpfpvllwLWN 87
Cdd:COG1177    1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLT--FPPEGFTLRWYAELF------SDPRLLDA-------LLN 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  88 SVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYipfiglNTHGGVIFAY- 166
Cdd:COG1177   66 SLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHv 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 167 MGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVaSLLLRDVNSYTLA 246
Cdd:COG1177  140 VFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVI-TLFLAGPGVTTLP 218

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 977512737 247 VGMQQYLNPQNYLWGdfAAAAVLSAIPITAVFLLAQRWL 285
Cdd:COG1177  219 VYIYSMIRRGISPEI--NALSTLLILLSLLLLLLAERLR 255
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
10-285 3.25e-23

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 99.08  E-value: 3.25e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  10 RLRLWITHILMLCFIALIMFPLLMVVAISLRSGnfatgslIPETLSWDHWRLALGFSVThadgsvtpppfpvLLWLWNSV 89
Cdd:COG1178  285 RWRWLALALCLLLVLLGLLLPLLALLLWSLTKA-------LDDNLTLDNYRFVLLDPSL-------------LRALLNSL 344

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  90 KIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLK-SMLIFQMFPAVLSLvalyALFDRLGQYIPFIGLNTHGGVIFAYMG 168
Cdd:COG1178  345 LLALLAALLAVLLALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGL----GLLLLFNRPLPLLLYGTLAILVLAYVV 420

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 169 D-IALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPvASLLLRDVNSYTLAV 247
Cdd:COG1178  421 RfLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLAV 499

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 977512737 248 GMQQYLnpQNYLWGDFAAAAVLSAIPITAVFLLAQRWL 285
Cdd:COG1178  500 LIYQLA--SSGRYGEAAALALLLVLVSLLPVLLLERLL 535
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
10-296 3.88e-20

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 90.22  E-value: 3.88e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  10 RLRLWITHILMLCFIALIMFPLLMVVAISLRSGNFATGSLIpetLSWDHWRLalgfsvthadgsvtpppfpvllwLWNSV 89
Cdd:COG1178    7 RRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALL---SDPYLWRA-----------------------LGNTL 60

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  90 KIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQY---------IPFIGLNTHG 160
Cdd:COG1178   61 LLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLntllralfgLEPPDIYGLG 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 161 GVIFAY-MGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRD 239
Cdd:COG1178  141 GIILVLvLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGG 220

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 977512737 240 VNsyTLAVGMQQYLNPQnylwGDFAAAAVLSAI--PITAVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG1178  221 YT--TLTTAIYQAWLGD----FDLGAAAALALVllLLVLLLLLLERRLRRRRRYATVGG 273
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 3-293 1.94e-18

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 83.27  E-value: 1.94e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   3 MVQPKSQRLRLWITHILMLCFIALIMF-PLLMVVAISLRSGNFATGslIPETLSWDHWRLALGFSVTHADgsvtpppfpv 81
Cdd:COG1176    1 MSAALRRRLRPLLLLLPALLWLLLFFVlPLLLLLVYSFTTRDPYGG--VVPGFTLENYARLFTDPLYLKV---------- 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  82 llwLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLkSMLIFQMFpaVLSLVALYA---------LFDRLGQYIP 152
Cdd:COG1176   69 ---LLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLL-LLVILPFW--TSFLVRTYAwivllgrngLLNSLLLALG 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 153 FIG-----LNTHGGVIFAYmgdiaLHVW------TIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFIL 221
Cdd:COG1176  143 LIDeplrlLYTEFAVVIGL-----VYVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLL 217

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 977512737 222 SFIAAITEVPVASLLlrdVNSYTLAVGM---QQYLNPQNylWGdFAAAAVLSAIPITAVFLLAQRWLVGGLTAGG 293
Cdd:COG1176  218 VFIPALGAFVTPALL---GGGKVLMIGNliyQQFLSALN--WP-LAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 4.48e-18

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 80.02  E-value: 4.48e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 165 AYMGDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 977512737 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
PRK10973 PRK10973
sn-glycerol-3-phosphate ABC transporter permease UgpE;
17-289 5.45e-15

sn-glycerol-3-phosphate ABC transporter permease UgpE;


Pssm-ID: 182875 [Multi-domain]  Cd Length: 281  Bit Score: 73.23  E-value: 5.45e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  17 HILMLCFIALIMFPLLMV-VAISLRSGNFATG--SLIPETLSWDHWRlalgfSVTHADGSVTPPPFPVLLWlwNSVKIAA 93
Cdd:PRK10973  13 HTMLILGIAVILFPLYVAfVAATLDKQAVFAVpmTLIPGTHLLENIA-----NIWVNGVGNNSAPFGRMLL--NSFVMAF 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  94 ITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGGVIFAYMGDiALH 173
Cdd:PRK10973  86 SITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKM------LDSYAGLTLPLMAS-ATA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 174 VWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYL 253
Cdd:PRK10973 159 TFLFRQFFMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMI 238

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 977512737 254 NPQNYL--WGDFAAAAVLSAIPITAVFLLAQRWLVGGL 289
Cdd:PRK10973 239 ATGEGTteWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 85-229 5.70e-15

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 73.25  E-value: 5.70e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKStLLKSM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLN--- 157
Cdd:COG0555   56 LKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKR-LVDALvdLPFALPTAVagIALLLLFGPNGWLGQLLAPLGIKvaf 134

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 977512737 158 THGGVIFAyMGDIAL--HVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:COG0555  135 TPLGIVLA-QTFVSLpfVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-234 2.07e-09

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 56.92  E-value: 2.07e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  86 WNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGL-NTHGGVIF 164
Cdd:PRK09500  60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLlFAHITFCL 139

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 165 AYMgdialhVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:PRK09500 140 PFV------VVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSS 203
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
85-226 2.85e-09

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 57.07  E-value: 2.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  85 LWNSVKIAAITAIGIVTLSTTCAYAFARmRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDR----LGQYIPFIGLNTH- 159
Cdd:COG1175   78 LGNTLLFTVVSVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPdyglLNALLGALGLEPIn 156

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 977512737 160 --GGVIFAYMGDIALHVWTIKGYF--------ETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAA 226
Cdd:COG1175  157 wlGDPSLALPAVIIVTVWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGA 233
modB PRK09421
molybdate ABC transporter permease subunit;
88-229 3.40e-09

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 56.08  E-value: 3.40e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  88 SVKIAAITAIGIVTLSTTCAYAFARMRFRGKStLLKSMLIFQM-FPAVLSLVALYALFDRLGqyipFIG--LNTHGGVIF 164
Cdd:PRK09421  14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLLHLPLvLPPVVTGYLLLISMGRRG----FIGqwLYEWFGISF 88

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 977512737 165 AY-----------MGdIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK09421  89 AFswrgaalaaavMA-FPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 1.12e-07

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 51.97  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthgg 161
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  162 VIFAYMG--------DIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 977512737  234 SLLLRDVNSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITAVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
cysT CHL00187
sulfate transport protein; Provisional
 80-229 5.64e-07

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 49.63  E-value: 5.64e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  80 PVLLWLWN-SVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIG 155
Cdd:CHL00187  51 PIALSAYSlTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdLPFALPTSVagLTLATVYGDNGWIGHLLSHLG 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 977512737 156 LN---THGGVIFAYM-GDIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:CHL00187 131 IQivfTKLGVLLAMIfVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 85-280 1.03e-06

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 49.68  E-value: 1.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHGGVIF 164
Cdd:TIGR03262  56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSIYGFWG 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  165 AYMGDI------ALHVWTIKgyFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLR 238
Cdd:TIGR03262 136 IVIGEVfytfphALMILVTA--LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG 213

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 977512737  239 DVNSYTLAVgMQQYLNPQNYLWGdfAAAAVLSAIPITAVFLL 280
Cdd:TIGR03262 214 DYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGI 252
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 81-229 3.27e-06

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 47.32  E-value: 3.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737   81 VLLWLWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKStLLKSM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGL 156
Cdd:TIGR02139  48 VLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR-IVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGI 126

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 977512737  157 N---THGGVIFAyMGDIALH--VWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:TIGR02139 127 KiafTPLGIVIA-LVFVSLPfvVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 112-286 4.01e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.52  E-value: 4.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  112 RMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYMGDIALHVWTIKGYFETIDNSLEEA 191
Cdd:pfam00528  11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  192 AALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGdfAAAAVLSA 271
Cdd:pfam00528  86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALIL 163

                         170
                  ....*....|....*
gi 977512737  272 IPITAVFLLAQRWLV 286
Cdd:pfam00528 164 LLLNLLVDILQRLLD 178
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 14-236 8.04e-06

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 46.38  E-value: 8.04e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  14 WITHILMLCFIALIMfPLLMVVAISLRSGNFATgslipetlSWDHWRLALGFSVTHADGSVTPppfpVLLwlwnSVKIAA 93
Cdd:PRK10592  11 WRIVILVLGFTFLYA-PMLMLVIYSFNSSKLVT--------VWAGWSTRWYGELFRDDAMMSA----VGL----SLTIAA 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  94 ITAIGIVTLSTTCAYAFARM-RFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLGQYIpfiGLNTHGGVIFAYMGDI-- 170
Cdd:PRK10592  74 CAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAI---GWPADRGMLTIWLAHVtf 150

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 977512737 171 --ALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLL 236
Cdd:PRK10592 151 ctAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV 218
LplB COG4209
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ...
 183-222 8.69e-04

ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 443357 [Multi-domain]  Cd Length: 316  Bit Score: 40.46  E-value: 8.69e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 977512737 183 TIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILS 222
Cdd:COG4209  202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN 241
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
107-280 1.43e-03

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 39.35  E-value: 1.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 107 AYAFARMRFRGKSTLLKSM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGL---NTHGGVIFAY-MGDIALHVWTIKG 179
Cdd:PRK10971  82 AWILTRYRFPGRTLLDALMdLPFALPTAVagLTLASLFSVNGWYGEWLAKFDIkvtYTWLGIAVAMaFTSIPFVVRTVQP 161

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 180 YFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYl 259
Cdd:PRK10971 162 VLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF- 240

                        170       180
                 ....*....|....*....|..
gi 977512737 260 wgDF-AAAAVLSAIPITAVFLL 280
Cdd:PRK10971 241 --DYpAASAIASVILAASLLLL 260
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
85-279 1.65e-03

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 39.35  E-value: 1.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  85 LWNSVKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLI-FQMFPAVLSLvaLYALFdrLGQYIPFIG-LNTHG-G 161
Cdd:PRK11602  66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGL--VYLLF--YGSNGPLGGwLDEHNlQ 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737 162 VIFAYMGDIALHVWTIKGYF--ETIDNSL------EEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:PRK11602 142 LMFSWPGMVLVTIFVTCPFVvrELVPVMLsqgsqeDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 221

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 977512737 234 SLLLRDVNSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITAVFL 279
Cdd:PRK11602 222 SVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAIITLFL 268
malF PRK10999
maltose ABC transporter permease MalF;
179-223 3.72e-03

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 38.79  E-value: 3.72e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 977512737 179 GYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSF 223
Cdd:PRK10999 396 GLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASF 440
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 10-229 6.72e-03

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 37.68  E-value: 6.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  10 RLRLWITHILMLCFIA-LIMFPLLMVVAISLRSgnfatgsliPETLSWDHWRLALGFSVTHADgsvtpppfpvllwLWNS 88
Cdd:PRK15050  21 RLRPLLWLLLPLLVLApLVVYPLVRVVLQSLTG---------EHGLGLATYRAVLGSPDFRGA-------------LLTT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 977512737  89 VKIAAITAIGIVTLSTTCAYAFARMRFRGKSTLLKSMLIFQMFPAVLSLVALYALFDRLG------------QYIPFIGL 156
Cdd:PRK15050  79 LQIAFASTAGCLVLGVLLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGsvnialqrlfglEAPPLDFL 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 977512737 157 NTHGGVIFAymgDIALH----VWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK15050 159 YSPGGVILA---EITFYtpfvVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNE 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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