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Conserved domains on  [gi|997162494|emb|CXT01296|]
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CDP-glycerol glycerophosphotransferase [Staphylococcus aureus]

Protein Classification

CDP-glycerol glycerophosphotransferase family protein( domain architecture ID 12052972)

CDP-glycerol glycerophosphotransferase family protein similar to Bacillus subtilis teichoic acid poly(glycerol phosphate) polymerase and teichoic acid glycerol-phosphate primase

EC:  2.7.8.-
Gene Ontology:  GO:0047355|GO:0071555|GO:0019350

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyphos_transf pfam04464
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids ...
26-389 1.22e-171

CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.


:

Pssm-ID: 398259  Cd Length: 360  Bit Score: 483.00  E-value: 1.22e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494   26 NKNLIYFESFHGKQYSDNPKALYEYLTE-HSDAQLIWGVKKGYEHiFQQHNVPYVKKFSMKWFLAMPRAKAWMINTRTPD 104
Cdd:pfam04464   3 DPNLVLFESFWGRGYSDNPKAIYEYLRElAPGYRIVWVVKKDHSA-RLPKGVPVVVRNSFRYLYLLLRAKYLVSNSNFPL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  105 WLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQnyqdgFTKESQRWDYLVSPNPYSTSIFQHAFHVSRDKILETGY 184
Cdd:pfam04464  82 YVVKRKNQVYLQTWHGTPLKHMGLDILEVPMANTGQN-----FLRNVDRWDYLISANPHSTNIFARAFNIDKERILETGY 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  185 PRNDKLSHKRNDTeyINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVT 264
Cdd:pfam04464 157 PRNDVLFNANNED--VQRIRERLGIPLGKKVILYAPTWRDDERGSIGSYRFELLIDLERLAFALGNDYVILLKMHPLIQN 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  265 RID--EHDDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDElRGFYMDYKKELPGPIVEN 342
Cdd:pfam04464 235 NIDifESSGYVVDVSDYEDVEDLLLASDILITDYSSVMFDYAVLDRPIIFYAYDLETYSAT-RGFYLDYESEAPGPVVET 313
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 997162494  343 QTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTIFK 389
Cdd:pfam04464 314 FDELIDALKSGDWDDDYYARKRRAFRDRFCKYDDGRSSERVVRLIFL 360
 
Name Accession Description Interval E-value
Glyphos_transf pfam04464
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids ...
26-389 1.22e-171

CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.


Pssm-ID: 398259  Cd Length: 360  Bit Score: 483.00  E-value: 1.22e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494   26 NKNLIYFESFHGKQYSDNPKALYEYLTE-HSDAQLIWGVKKGYEHiFQQHNVPYVKKFSMKWFLAMPRAKAWMINTRTPD 104
Cdd:pfam04464   3 DPNLVLFESFWGRGYSDNPKAIYEYLRElAPGYRIVWVVKKDHSA-RLPKGVPVVVRNSFRYLYLLLRAKYLVSNSNFPL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  105 WLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQnyqdgFTKESQRWDYLVSPNPYSTSIFQHAFHVSRDKILETGY 184
Cdd:pfam04464  82 YVVKRKNQVYLQTWHGTPLKHMGLDILEVPMANTGQN-----FLRNVDRWDYLISANPHSTNIFARAFNIDKERILETGY 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  185 PRNDKLSHKRNDTeyINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVT 264
Cdd:pfam04464 157 PRNDVLFNANNED--VQRIRERLGIPLGKKVILYAPTWRDDERGSIGSYRFELLIDLERLAFALGNDYVILLKMHPLIQN 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  265 RID--EHDDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDElRGFYMDYKKELPGPIVEN 342
Cdd:pfam04464 235 NIDifESSGYVVDVSDYEDVEDLLLASDILITDYSSVMFDYAVLDRPIIFYAYDLETYSAT-RGFYLDYESEAPGPVVET 313
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 997162494  343 QTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTIFK 389
Cdd:pfam04464 314 FDELIDALKSGDWDDDYYARKRRAFRDRFCKYDDGRSSERVVRLIFL 360
TagB COG1887
CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope ...
6-387 2.34e-143

CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope biogenesis, Lipid transport and metabolism];


Pssm-ID: 441491  Cd Length: 369  Bit Score: 411.69  E-value: 2.34e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494   6 IKKLIEHSIYTTFKLLSKlpNKNLIYFESFHGKQYSDNPKALYEYLTE-HSDAQLIWGVKKGYEHIfQQHNVPYVKKFSM 84
Cdd:COG1887    2 LLLLLRRLYYRLSRLLPV--KKNIILFESRNGRSYSDNPKALFEYLRKnHPDYEVVWVVDDDSKRL-PKEGVKVVKRGSL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  85 KWFLAMPRAKAWMINTRT--PDWLYKSPRTTYLQTWHGTPLKKIGLDisnvkmlgtNTQNYQDGFTKESQRWDYLVSPNP 162
Cdd:COG1887   79 KYLYALARAKYLVSNHYFpfPSYFRKRKGQKYVQLWHGTPLKKIGLD---------DPPRYLKRVLREYRNWDYLLSSSE 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494 163 YSTSIFQHAFHVSRDKILETGYPRNDKLsHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFnvnfDIE 242
Cdd:COG1887  150 ESTEIFRRAFGYPEGEVLETGYPRNDVL-FDADREELREELRERLGIPEDKKVILYAPTWRDDEDNFDDYLDL----DLE 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494 243 ALRQALDDDYVILLRMHYLVVTRIDEH-DDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYG 321
Cdd:COG1887  225 RLAELLGDDYVLLVRLHPFVKDSLDEKySDRIIDVSDYPDINDLLLASDVLITDYSSVMFDFALLDRPIIFYAYDLEEYR 304
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 997162494 322 DElRGFYMDYKKELPGPIVENQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTI 387
Cdd:COG1887  305 DE-RGFYFDYEEDAPGPVVTTFEELIDAIEDILENGDEYAEKYKAFRERFFPYDDGNASERVVDAI 369
 
Name Accession Description Interval E-value
Glyphos_transf pfam04464
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids ...
26-389 1.22e-171

CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.


Pssm-ID: 398259  Cd Length: 360  Bit Score: 483.00  E-value: 1.22e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494   26 NKNLIYFESFHGKQYSDNPKALYEYLTE-HSDAQLIWGVKKGYEHiFQQHNVPYVKKFSMKWFLAMPRAKAWMINTRTPD 104
Cdd:pfam04464   3 DPNLVLFESFWGRGYSDNPKAIYEYLRElAPGYRIVWVVKKDHSA-RLPKGVPVVVRNSFRYLYLLLRAKYLVSNSNFPL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  105 WLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQnyqdgFTKESQRWDYLVSPNPYSTSIFQHAFHVSRDKILETGY 184
Cdd:pfam04464  82 YVVKRKNQVYLQTWHGTPLKHMGLDILEVPMANTGQN-----FLRNVDRWDYLISANPHSTNIFARAFNIDKERILETGY 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  185 PRNDKLSHKRNDTeyINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVT 264
Cdd:pfam04464 157 PRNDVLFNANNED--VQRIRERLGIPLGKKVILYAPTWRDDERGSIGSYRFELLIDLERLAFALGNDYVILLKMHPLIQN 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  265 RID--EHDDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDElRGFYMDYKKELPGPIVEN 342
Cdd:pfam04464 235 NIDifESSGYVVDVSDYEDVEDLLLASDILITDYSSVMFDYAVLDRPIIFYAYDLETYSAT-RGFYLDYESEAPGPVVET 313
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 997162494  343 QTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTIFK 389
Cdd:pfam04464 314 FDELIDALKSGDWDDDYYARKRRAFRDRFCKYDDGRSSERVVRLIFL 360
TagB COG1887
CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope ...
6-387 2.34e-143

CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope biogenesis, Lipid transport and metabolism];


Pssm-ID: 441491  Cd Length: 369  Bit Score: 411.69  E-value: 2.34e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494   6 IKKLIEHSIYTTFKLLSKlpNKNLIYFESFHGKQYSDNPKALYEYLTE-HSDAQLIWGVKKGYEHIfQQHNVPYVKKFSM 84
Cdd:COG1887    2 LLLLLRRLYYRLSRLLPV--KKNIILFESRNGRSYSDNPKALFEYLRKnHPDYEVVWVVDDDSKRL-PKEGVKVVKRGSL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494  85 KWFLAMPRAKAWMINTRT--PDWLYKSPRTTYLQTWHGTPLKKIGLDisnvkmlgtNTQNYQDGFTKESQRWDYLVSPNP 162
Cdd:COG1887   79 KYLYALARAKYLVSNHYFpfPSYFRKRKGQKYVQLWHGTPLKKIGLD---------DPPRYLKRVLREYRNWDYLLSSSE 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494 163 YSTSIFQHAFHVSRDKILETGYPRNDKLsHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFnvnfDIE 242
Cdd:COG1887  150 ESTEIFRRAFGYPEGEVLETGYPRNDVL-FDADREELREELRERLGIPEDKKVILYAPTWRDDEDNFDDYLDL----DLE 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997162494 243 ALRQALDDDYVILLRMHYLVVTRIDEH-DDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYG 321
Cdd:COG1887  225 RLAELLGDDYVLLVRLHPFVKDSLDEKySDRIIDVSDYPDINDLLLASDVLITDYSSVMFDFALLDRPIIFYAYDLEEYR 304
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 997162494 322 DElRGFYMDYKKELPGPIVENQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGKASQRICQTI 387
Cdd:COG1887  305 DE-RGFYFDYEEDAPGPVVTTFEELIDAIEDILENGDEYAEKYKAFRERFFPYDDGNASERVVDAI 369
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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