|
Name |
Accession |
Description |
Interval |
E-value |
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
1-339 |
0e+00 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 637.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1 MLVESVIGIVRAVNGLLEKVNAQGHASLVKSGARLEEGDVLTLLSGEAYIQFIHGFPEALALGKPVKLDGVSPALQYGVE 80
Cdd:NF041514 1 MLAESVIGIVRAVNGLLEKVNAQGQASLVKSGARLEEGDVLTLLSGEAYIQFIHGFPEALALEKPVKLDGVSPTLQYGVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 81 ELNEQLVQEALAKGIDPSVILDVLGSAAAGAEAVGSGGDAFIIDPLFGFGQVTAGYPTGPISFAYEADTQHLFWYVPEET 160
Cdd:NF041514 81 DLKEQMVQEAIAKGIDPSVILDVLGSAAAGAEAVGSGGDAFIIDPLFGFGQVTAGYPTGPISFAYEADTQQLFWFVPEET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 161 VEVAESDLTTEPESIPQIPQFTTNQAVLTVFEDALPSGIADSAGQARIASSSLSSLLTSSPDVAASFAFNSNSSALPTLK 240
Cdd:NF041514 161 GVIAESELTTEPESIPQIPQFTTNQAVLTVFEDALPSGIPDSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 241 SGGIDLSYELSADKRTLTLRESstqgPGAEVMKFELTADGRLTQTLMDSIDHPTTDSDDGEWMRLDLSPLIDVTFTRASD 320
Cdd:NF041514 241 SGGIDLDYELSSDKRTLTASEP----PGAEVMQFELTADGQLTQTLMDSIDHPTADSDDSEWMRLDLSPLIDVTFTRTSD 316
|
330
....*....|....*....
gi 998834228 321 GTVLESRTLPANAVVAGIQ 339
Cdd:NF041514 317 GTVLESRTLPANAVVAGIQ 335
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
521-677 |
1.16e-36 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 136.60 E-value: 1.16e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 521 IVFEDDGPSIVVS-GATQTLTVDESVLAT-----NDTQSFAGLFTPSFGADGAAAANAlTYSLGVSAnGAASGVLDTASG 594
Cdd:pfam19116 1 ISFEDDGPSITASaGEAPTLTVDETALGTggglaDATASFAGLFTSDFGADGAGSTGS-TYSLSLSA-GAASGLTDTATG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 595 NQVFLFLENGIVVGREgsdaldAATGDVVFNISVDGS-GNVTLDQVRAVVHDNPLDPDESTgptqLNAANLVTLTAVATD 673
Cdd:pfam19116 79 QAILLFLEGGVVVGRT------AGGGDVVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDSV----SLAAGLITLTATVTD 148
|
....
gi 998834228 674 KDGD 677
Cdd:pfam19116 149 GDGD 152
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
689-845 |
1.67e-36 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 136.22 E-value: 1.67e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 689 FNFEDDGPSIVVS-GATQTLTVDESVLAT-----NDTQSFAGLFTPSFGADGAAAANAlTYSLGVSAnGAASGVLDTASG 762
Cdd:pfam19116 1 ISFEDDGPSITASaGEAPTLTVDETALGTggglaDATASFAGLFTSDFGADGAGSTGS-TYSLSLSA-GAASGLTDTATG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 763 NQVFLFLENGIVVGREgsdaldAATGDVVFNISVDGS-GNVTLDQVRAVVHDNPLDPDESTgptqLNAANLVTLTAVATD 841
Cdd:pfam19116 79 QAILLFLEGGVVVGRT------AGGGDVVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDSV----SLAAGLITLTATVTD 148
|
....
gi 998834228 842 KDGD 845
Cdd:pfam19116 149 GDGD 152
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
1060-1191 |
8.07e-34 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 127.78 E-value: 8.07e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1060 QSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD-----TLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGadEN 1134
Cdd:TIGR03660 6 TQGADGVVSYQLDDSTNPVAGLTSGGQAVTLSETSNadgnfTYTATAGGNPVFTLTLNADGSYEFTLEGPLDHAAG--SD 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 1135 DITINLGsvIRATDSDGDTVTAaadGLVITVDDDTP-VTGTISLVADEDNLPRGNNDT 1191
Cdd:TIGR03660 84 ELTLNFP--IIATDFDGDTSSI---TLPVTIVDDVPtITDVDALTVDEDDLPGGSDGS 136
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
907-1036 |
5.86e-32 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 122.78 E-value: 5.86e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 907 QSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD-----TLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGadEN 981
Cdd:TIGR03660 6 TQGADGVVSYQLDDSTNPVAGLTSGGQAVTLSETSNadgnfTYTATAGGNPVFTLTLNADGSYEFTLEGPLDHAAG--SD 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 998834228 982 DIAINLGsvIRATDSDGDTVTAaadGLVITVDDDTPIASANKLTgVVDEDGLTGG 1036
Cdd:TIGR03660 84 ELTLNFP--IIATDFDGDTSSI---TLPVTIVDDVPTITDVDAL-TVDEDDLPGG 132
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
311-1856 |
1.52e-19 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 97.14 E-value: 1.52e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 311 IDVTFTRASDGTVLESRTLPANAVVAGIQDDVPIARAQLTNNEILLDETIGMKAGDADAANDDFNPATTVDPFNNTYGIP 390
Cdd:COG3210 123 ATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALI 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 391 IGLVQNANLLDTSTSEMGGDYKNATMTHLLKITDAVSGLQTTDGTPINLFLESNGDITGRAGDVGAPAVFAIRMNPNTGA 470
Cdd:COG3210 203 NATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 471 ISVAQYGPIKQFDTNSHDEAVDLTGRISAVVTAKDSDGDESNVEIPIGQLIVFEDDGPSIVVSGATQTLTVDESVLATND 550
Cdd:COG3210 283 TGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSG 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 551 TQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDG 630
Cdd:COG3210 363 LTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVT 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 631 SGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVD 710
Cdd:COG3210 443 GGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGG 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 711 ESVLATNDTQSFAGL-FTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGD 789
Cdd:COG3210 523 GGGNATSGGTGGDGTtLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLS 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 790 VVFNISVDGSGNVTLDQVRAVVHDNPLDPD----ESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPV 865
Cdd:COG3210 603 IGTGSAGATGTITLGAGTSGAGANATGGGAgltgSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGA 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 866 ASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNAST-----------SGLPALSSGGVA 934
Cdd:COG3210 683 TGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGAtltlnagvtitSGNAGTLSIGLT 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 935 LTYAVSG--DTLTASAGSTQVFTFTLNANGNYSFTLLAKLD-HPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVIT 1011
Cdd:COG3210 763 ANTTASGttLTLANANGNTSAGATLDNAGAEISIDITADGTiTAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGG 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1012 VDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYA 1091
Cdd:COG3210 843 SNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTG 922
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1092 VSGDTLTASAGSTQVFTFTLNANGNYSFTLlakldhpAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPV 1171
Cdd:COG3210 923 GGGLTGGNAAAGGTGAGNGTTALSGTQGNA-------GLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATG 995
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1172 TGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTG 1251
Cdd:COG3210 996 ILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAA 1075
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1252 GALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEG 1331
Cdd:COG3210 1076 SNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVA 1155
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1332 FVTNQAGIVRTFDLDFDANIDNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNNVVEGWINGGP 1411
Cdd:COG3210 1156 GGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGG 1235
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1412 GDVGSTIVFRTTLQPDMNYNASNDTYKFELFQPISTSTNVSIANFSGVNATSREFIYLENASGPGEDILFSAYIRNDNGS 1491
Cdd:COG3210 1236 SSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVG 1315
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1492 FTDATVNANAQGIGVNNQNMNDRENLRL-DFVRNASTTGTNQNMTYEYDDHYLVNNFSFKIIQVTGNPLTGSLEVWVRAY 1570
Cdd:COG3210 1316 TGIGGTTATGTAVAAVNSGGVNAGGGTInTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEG 1395
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1571 NADDDDPTNNTVSSANNLAHQDALRDDPQVALTQILVNGVPVTPTAVNASGGYLISGLNLNDTITIRSANGYDRVEIENP 1650
Cdd:COG3210 1396 TNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGN 1475
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1651 RSGAHGVSNSSLNNETFDIGLFSYDTIKTTPSEININMGLSLTDSDGDKINSSIDINLAPSVFKVGENVDDTSNSNIPHR 1730
Cdd:COG3210 1476 AVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSE 1555
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1731 VGGDTGVVDGSAGADILVGDVGGVEVIGTTARLAFILDESGSMSQNFGGTTRLEVLKQAMTDILTELSNTPNASITVHLV 1810
Cdd:COG3210 1556 GGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVT 1635
|
1530 1540 1550 1560
....*....|....*....|....*....|....*....|....*.
gi 998834228 1811 KFASVVNGTGTFEITGGGLQQALDFISGLQIQQGLLAGTNYEAALG 1856
Cdd:COG3210 1636 TNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLG 1681
|
|
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
864-1010 |
3.20e-17 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 85.81 E-value: 3.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 864 PVASTNKLTGVVDEDGLTGGIAggvgDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD- 942
Cdd:NF041514 179 PQFTTNQAVLTVFEDALPSGIP----DSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLKSGGIDLDYELSSDk 254
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 998834228 943 -TLTAS-AGSTQVFTFTLNANGNYSFTLLAKLDHPAgADEND---IAINLGSVIRAtdsdgdTVTAAADGLVI 1010
Cdd:NF041514 255 rTLTASePPGAEVMQFELTADGQLTQTLMDSIDHPT-ADSDDsewMRLDLSPLIDV------TFTRTSDGTVL 320
|
|
| T1SS_VCA0849 |
TIGR03661 |
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a ... |
2720-2818 |
4.52e-17 |
|
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a C-terminal domain associated with secretion by type 1 secretion systems (T1SS). Members of this subclass do not include the RtxA toxin of Vibrio cholerae and its homologs, although the two classes of proteins share large size, occurrence in genomes with T1SS, regions with long tandem repeats, and regions with the glycine-rich repeat modeled by pfam00353. [Cellular processes, Pathogenesis]
Pssm-ID: 274707 Cd Length: 88 Bit Score: 78.15 E-value: 4.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2720 DTITDFKANPvdqssdaSVLNLSDLLSDADLETNSLDNYLNVSTTEE-GDTAIKVDPNGNGNFDAPAQTIILEDVDLTAv 2798
Cdd:TIGR03661 1 DTITDFTLGE-------DKLDLSDLLSGEGVSSANLDQYLNVTTSGEdGNTVISVDSDGSAGSAAVTQTITLEGVDLSS- 72
|
90 100
....*....|....*....|
gi 998834228 2799 fatnNSHDIVNQMIANGNLI 2818
Cdd:TIGR03661 73 ----TSADIINQLLDNNQLI 88
|
|
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
1017-1173 |
7.13e-17 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 84.66 E-value: 7.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1017 PIASANKLTGVVDEDGLTGGIAggvgDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD- 1095
Cdd:NF041514 179 PQFTTNQAVLTVFEDALPSGIP----DSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLKSGGIDLDYELSSDk 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1096 -TLTAS-AGSTQVFTFTLNANGNYSFTLLAKLDHPAgADEND---ITINLGSVIRAtdsdgdTVTAAADGLVI---TVDD 1167
Cdd:NF041514 255 rTLTASePPGAEVMQFELTADGQLTQTLMDSIDHPT-ADSDDsewMRLDLSPLIDV------TFTRTSDGTVLesrTLPA 327
|
....*.
gi 998834228 1168 DTPVTG 1173
Cdd:NF041514 328 NAVVAG 333
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
338-509 |
1.57e-13 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 70.35 E-value: 1.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 338 IQDDVP-IARAQLTNNEILLDETigmkaGDADAANDDFNPATTVDPFNNTYGIpiglvqnanllDTSTSemggdyknATM 416
Cdd:pfam19116 3 FEDDGPsITASAGEAPTLTVDET-----ALGTGGGLADATASFAGLFTSDFGA-----------DGAGS--------TGS 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 417 THLLKITDAV-SGL-QTTDGTPINLFLEsNGDITGRAGDvGAPAVFAIRMNPNTGAISVAQYGPIKQFDTNSHDEAVDLT 494
Cdd:pfam19116 59 TYSLSLSAGAaSGLtDTATGQAILLFLE-GGVVVGRTAG-GGDVVFTVSVDAATGEVTLTQYRAVVHPDTSDPDDSVSLA 136
|
170
....*....|....*.
gi 998834228 495 -GRISAVVTAKDSDGD 509
Cdd:pfam19116 137 aGLITLTATVTDGDGD 152
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
857-999 |
2.27e-10 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 61.49 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 857 FNFEDDGPVASTNKLTG---VVDEDGLTGGiaggvgdvaGQAVAASGNVATLFQS--GADAP----LTYSLNAST---SG 924
Cdd:pfam19116 1 ISFEDDGPSITASAGEAptlTVDETALGTG---------GGLADATASFAGLFTSdfGADGAgstgSTYSLSLSAgaaSG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 925 LPALSSGGVALTYAVSGDTLTASAGSTQ-VFTFTLNAN-GNYSFTLLAKLDHPAGADENDiAINLGS-----VIRATDSD 997
Cdd:pfam19116 72 LTDTATGQAILLFLEGGVVVGRTAGGGDvVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDD-SVSLAAglitlTATVTDGD 150
|
..
gi 998834228 998 GD 999
Cdd:pfam19116 151 GD 152
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
2128-2195 |
5.75e-10 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 62.00 E-value: 5.75e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 2128 GGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNnagTAPTDIITDFEV 2195
Cdd:pfam08548 86 GGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSL---TAAPDTIRDFVS 150
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
1010-1152 |
4.82e-09 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 57.64 E-value: 4.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1010 ITVDDDTPIASANKLTG---VVDEDGLTGGiaggvgdvaGQAVAASGNVATLFQS--GADAP----LTYSLNAST---SG 1077
Cdd:pfam19116 1 ISFEDDGPSITASAGEAptlTVDETALGTG---------GGLADATASFAGLFTSdfGADGAgstgSTYSLSLSAgaaSG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1078 LPALSSGGVALTYAVSGDTLTASAGSTQ-VFTFTLNAN-GNYSFTLLAKLDHPAGADEND-ITINLGSV---IRATDSDG 1151
Cdd:pfam19116 72 LTDTATGQAILLFLEGGVVVGRTAGGGDvVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDsVSLAAGLItltATVTDGDG 151
|
.
gi 998834228 1152 D 1152
Cdd:pfam19116 152 D 152
|
|
| vWFA |
cd00198 |
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation ... |
1761-1898 |
9.91e-08 |
|
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.
Pssm-ID: 238119 [Multi-domain] Cd Length: 161 Bit Score: 54.11 E-value: 9.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1761 ARLAFILDESGSMSQnfggtTRLEVLKQAMTDILTELSNTPNASiTVHLVKFASVVNGTGTFEiTGGGLQQALDFISGLQ 1840
Cdd:cd00198 1 ADIVFLLDVSGSMGG-----EKLDKAKEALKALVSSLSASPPGD-RVGLVTFGSNARVVLPLT-TDTDKADLLEAIDALK 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 1841 IQQGllAGTNYEAALGQTVQWFSSQSGTVDVQQTLFFTDGVPTFYMDGNSTEYTNLAR 1898
Cdd:cd00198 74 KGLG--GGTNIGAALRLALELLKSAKRPNARRVIILLTDGEPNDGPELLAEAARELRK 129
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2674-2708 |
7.13e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 47.82 E-value: 7.13e-07
10 20 30
....*....|....*....|....*....|....*
gi 998834228 2674 GGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTF 2708
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2121-2214 |
2.67e-05 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 48.36 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2121 GGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGTAPTDIITDFEVNIDKI 2200
Cdd:COG2931 137 AGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDG 216
|
90
....*....|....
gi 998834228 2201 IINANNIIGVSVSN 2214
Cdd:COG2931 217 GDGDDGLGGGGGDD 230
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
879-1158 |
1.85e-04 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 47.04 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 879 GLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTsglpalSSGGVALTYAVSGDTLTASAGSTqvfTFTL 958
Cdd:PRK08026 169 GLDGFNVNGKGTVANTAATVSDLTAAGATLDTTGLYDVKTKNAA------LTTADALAKLGDGDKVTATATGG---DYTY 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 959 NA-NGNYSFTLLAKLDHPAGAD--ENDIAINLGSVIRATDSDGdTVTAAADGLVITVDDDTPIASANKLTgVVDEDGLTG 1035
Cdd:PRK08026 240 NAkSGKYQAADLAATLTPDVGGtaGASYTIKDGTYEVNVDSDG-KITLGGSALYIDATGNLTTNNAGAAT-KATLDALKK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1036 GIAGGVGDVAGQAVAASGNVATlfqsGADAPLTYSLNASTSGlpALSSGGVAL-----TYAVSGDTLTASAGSTqvfTFT 1110
Cdd:PRK08026 318 TASEGAATAKAALAAAGVTVAD----GVTAKTVKMSYTDKNG--KVIDGGYAVktgddYYAADYDEITGAISAT---TTY 388
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 998834228 1111 LNANGNYSFTLLAKLDHpAGADENDITINlGSVIRATDSDGDTVTAAA 1158
Cdd:PRK08026 389 YTAKDGTTKTAANKLGG-ADGKTEVVTID-GKTYVASDGKQTTLAEAA 434
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2660-2771 |
1.63e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 42.97 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2660 DHSLTMLANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDDGGVDTITDFKANPVDQSSDASVL 2739
Cdd:COG2931 139 NDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGD 218
|
90 100 110
....*....|....*....|....*....|..
gi 998834228 2740 NLSDLLSDADLETNSLDNYLNVSTTEEGDTAI 2771
Cdd:COG2931 219 GDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGL 250
|
|
| VWA |
smart00327 |
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins ... |
1763-1887 |
2.12e-03 |
|
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Pssm-ID: 214621 [Multi-domain] Cd Length: 175 Bit Score: 41.67 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1763 LAFILDESGSMSQNfggttRLEVLKQAMTDILTELSNTPNaSITVHLVKFASVVngtgTFEITGGGLQQALDFISGLQ-I 1841
Cdd:smart00327 2 VVFLLDGSGSMGGN-----RFELAKEFVLKLVEQLDIGPD-GDRVGLVTFSDDA----RVLFPLNDSRSKDALLEALAsL 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 998834228 1842 QQGLLAGTNYEAALGQTVQ-WFSSQSGT-VDVQQTL-FFTDGVPTFYMD 1887
Cdd:smart00327 72 SYKLGGGTNLGAALQYALEnLFSKSAGSrRGAPKVViLITDGESNDGPK 120
|
|
| retention_LapA |
NF033682 |
retention module-containing protein; The retention module, as described for the giant adhesin ... |
5-138 |
3.67e-03 |
|
retention module-containing protein; The retention module, as described for the giant adhesin LapA of Pseudomonas fluorescens and for an ice-binding giant adhesin of an Antarctic bacterium, appears at the N-terminus of a number of very large repetitive proteins, many of which have C-terminal regions that make them substrates for type I secretion systems.
Pssm-ID: 468140 Cd Length: 145 Bit Score: 40.31 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 5 SVIGIVRAVNGLLEKVNAQGHASLVKSGARLEEGDVL-TLLSGEAYIQFIHGFPEALALGKPVKLDGVSPALQYGVEELN 83
Cdd:NF033682 1 TQVAVVKAVSGTVFAVNADGSVRVLKVGDTLQAGEIViTGNGAAVELQLADGSTLTLGENCVACVTEDNGLIEFDAEEAA 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 998834228 84 E--------QLVQEALAKGIDPSVILDvlGSAAAGAEAVGSGGDAFI-IDPLFGFGQVTAGYPT 138
Cdd:NF033682 81 AasfddpdiAAIQAAILAGADPTELLE--ATAAGLAGGAGGAGGGFVtIDRNGDEVLPSTGFPT 142
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2666-2782 |
7.08e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 41.05 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2666 LANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDDGGVDTITDFKANPVDQSSDASVLNLSDLL 2745
Cdd:COG2931 136 GAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLD 215
|
90 100 110
....*....|....*....|....*....|....*..
gi 998834228 2746 SDADLETNSLDNYLNVSTTEEGDTAIKVDPNGNGNFD 2782
Cdd:COG2931 216 GGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGLGG 252
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
1-339 |
0e+00 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 637.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1 MLVESVIGIVRAVNGLLEKVNAQGHASLVKSGARLEEGDVLTLLSGEAYIQFIHGFPEALALGKPVKLDGVSPALQYGVE 80
Cdd:NF041514 1 MLAESVIGIVRAVNGLLEKVNAQGQASLVKSGARLEEGDVLTLLSGEAYIQFIHGFPEALALEKPVKLDGVSPTLQYGVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 81 ELNEQLVQEALAKGIDPSVILDVLGSAAAGAEAVGSGGDAFIIDPLFGFGQVTAGYPTGPISFAYEADTQHLFWYVPEET 160
Cdd:NF041514 81 DLKEQMVQEAIAKGIDPSVILDVLGSAAAGAEAVGSGGDAFIIDPLFGFGQVTAGYPTGPISFAYEADTQQLFWFVPEET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 161 VEVAESDLTTEPESIPQIPQFTTNQAVLTVFEDALPSGIADSAGQARIASSSLSSLLTSSPDVAASFAFNSNSSALPTLK 240
Cdd:NF041514 161 GVIAESELTTEPESIPQIPQFTTNQAVLTVFEDALPSGIPDSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 241 SGGIDLSYELSADKRTLTLRESstqgPGAEVMKFELTADGRLTQTLMDSIDHPTTDSDDGEWMRLDLSPLIDVTFTRASD 320
Cdd:NF041514 241 SGGIDLDYELSSDKRTLTASEP----PGAEVMQFELTADGQLTQTLMDSIDHPTADSDDSEWMRLDLSPLIDVTFTRTSD 316
|
330
....*....|....*....
gi 998834228 321 GTVLESRTLPANAVVAGIQ 339
Cdd:NF041514 317 GTVLESRTLPANAVVAGIQ 335
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
521-677 |
1.16e-36 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 136.60 E-value: 1.16e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 521 IVFEDDGPSIVVS-GATQTLTVDESVLAT-----NDTQSFAGLFTPSFGADGAAAANAlTYSLGVSAnGAASGVLDTASG 594
Cdd:pfam19116 1 ISFEDDGPSITASaGEAPTLTVDETALGTggglaDATASFAGLFTSDFGADGAGSTGS-TYSLSLSA-GAASGLTDTATG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 595 NQVFLFLENGIVVGREgsdaldAATGDVVFNISVDGS-GNVTLDQVRAVVHDNPLDPDESTgptqLNAANLVTLTAVATD 673
Cdd:pfam19116 79 QAILLFLEGGVVVGRT------AGGGDVVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDSV----SLAAGLITLTATVTD 148
|
....
gi 998834228 674 KDGD 677
Cdd:pfam19116 149 GDGD 152
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
689-845 |
1.67e-36 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 136.22 E-value: 1.67e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 689 FNFEDDGPSIVVS-GATQTLTVDESVLAT-----NDTQSFAGLFTPSFGADGAAAANAlTYSLGVSAnGAASGVLDTASG 762
Cdd:pfam19116 1 ISFEDDGPSITASaGEAPTLTVDETALGTggglaDATASFAGLFTSDFGADGAGSTGS-TYSLSLSA-GAASGLTDTATG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 763 NQVFLFLENGIVVGREgsdaldAATGDVVFNISVDGS-GNVTLDQVRAVVHDNPLDPDESTgptqLNAANLVTLTAVATD 841
Cdd:pfam19116 79 QAILLFLEGGVVVGRT------AGGGDVVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDSV----SLAAGLITLTATVTD 148
|
....
gi 998834228 842 KDGD 845
Cdd:pfam19116 149 GDGD 152
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
1060-1191 |
8.07e-34 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 127.78 E-value: 8.07e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1060 QSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD-----TLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGadEN 1134
Cdd:TIGR03660 6 TQGADGVVSYQLDDSTNPVAGLTSGGQAVTLSETSNadgnfTYTATAGGNPVFTLTLNADGSYEFTLEGPLDHAAG--SD 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 1135 DITINLGsvIRATDSDGDTVTAaadGLVITVDDDTP-VTGTISLVADEDNLPRGNNDT 1191
Cdd:TIGR03660 84 ELTLNFP--IIATDFDGDTSSI---TLPVTIVDDVPtITDVDALTVDEDDLPGGSDGS 136
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
907-1036 |
5.86e-32 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 122.78 E-value: 5.86e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 907 QSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD-----TLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGadEN 981
Cdd:TIGR03660 6 TQGADGVVSYQLDDSTNPVAGLTSGGQAVTLSETSNadgnfTYTATAGGNPVFTLTLNADGSYEFTLEGPLDHAAG--SD 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 998834228 982 DIAINLGsvIRATDSDGDTVTAaadGLVITVDDDTPIASANKLTgVVDEDGLTGG 1036
Cdd:TIGR03660 84 ELTLNFP--IIATDFDGDTSSI---TLPVTIVDDVPTITDVDAL-TVDEDDLPGG 132
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
311-1856 |
1.52e-19 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 97.14 E-value: 1.52e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 311 IDVTFTRASDGTVLESRTLPANAVVAGIQDDVPIARAQLTNNEILLDETIGMKAGDADAANDDFNPATTVDPFNNTYGIP 390
Cdd:COG3210 123 ATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALI 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 391 IGLVQNANLLDTSTSEMGGDYKNATMTHLLKITDAVSGLQTTDGTPINLFLESNGDITGRAGDVGAPAVFAIRMNPNTGA 470
Cdd:COG3210 203 NATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 471 ISVAQYGPIKQFDTNSHDEAVDLTGRISAVVTAKDSDGDESNVEIPIGQLIVFEDDGPSIVVSGATQTLTVDESVLATND 550
Cdd:COG3210 283 TGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSG 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 551 TQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDG 630
Cdd:COG3210 363 LTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVT 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 631 SGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVD 710
Cdd:COG3210 443 GGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGG 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 711 ESVLATNDTQSFAGL-FTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGD 789
Cdd:COG3210 523 GGGNATSGGTGGDGTtLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLS 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 790 VVFNISVDGSGNVTLDQVRAVVHDNPLDPD----ESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPV 865
Cdd:COG3210 603 IGTGSAGATGTITLGAGTSGAGANATGGGAgltgSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGA 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 866 ASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNAST-----------SGLPALSSGGVA 934
Cdd:COG3210 683 TGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGAtltlnagvtitSGNAGTLSIGLT 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 935 LTYAVSG--DTLTASAGSTQVFTFTLNANGNYSFTLLAKLD-HPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVIT 1011
Cdd:COG3210 763 ANTTASGttLTLANANGNTSAGATLDNAGAEISIDITADGTiTAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGG 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1012 VDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYA 1091
Cdd:COG3210 843 SNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTG 922
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1092 VSGDTLTASAGSTQVFTFTLNANGNYSFTLlakldhpAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPV 1171
Cdd:COG3210 923 GGGLTGGNAAAGGTGAGNGTTALSGTQGNA-------GLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATG 995
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1172 TGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTG 1251
Cdd:COG3210 996 ILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAA 1075
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1252 GALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEG 1331
Cdd:COG3210 1076 SNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVA 1155
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1332 FVTNQAGIVRTFDLDFDANIDNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNNVVEGWINGGP 1411
Cdd:COG3210 1156 GGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGG 1235
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1412 GDVGSTIVFRTTLQPDMNYNASNDTYKFELFQPISTSTNVSIANFSGVNATSREFIYLENASGPGEDILFSAYIRNDNGS 1491
Cdd:COG3210 1236 SSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVG 1315
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1492 FTDATVNANAQGIGVNNQNMNDRENLRL-DFVRNASTTGTNQNMTYEYDDHYLVNNFSFKIIQVTGNPLTGSLEVWVRAY 1570
Cdd:COG3210 1316 TGIGGTTATGTAVAAVNSGGVNAGGGTInTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEG 1395
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1571 NADDDDPTNNTVSSANNLAHQDALRDDPQVALTQILVNGVPVTPTAVNASGGYLISGLNLNDTITIRSANGYDRVEIENP 1650
Cdd:COG3210 1396 TNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGN 1475
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1651 RSGAHGVSNSSLNNETFDIGLFSYDTIKTTPSEININMGLSLTDSDGDKINSSIDINLAPSVFKVGENVDDTSNSNIPHR 1730
Cdd:COG3210 1476 AVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSE 1555
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1731 VGGDTGVVDGSAGADILVGDVGGVEVIGTTARLAFILDESGSMSQNFGGTTRLEVLKQAMTDILTELSNTPNASITVHLV 1810
Cdd:COG3210 1556 GGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVT 1635
|
1530 1540 1550 1560
....*....|....*....|....*....|....*....|....*.
gi 998834228 1811 KFASVVNGTGTFEITGGGLQQALDFISGLQIQQGLLAGTNYEAALG 1856
Cdd:COG3210 1636 TNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLG 1681
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
529-2191 |
1.03e-18 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 94.45 E-value: 1.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 529 SIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLfleNGIVVG 608
Cdd:COG3210 21 TTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGAAAANTAGT---LETGLT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 609 REGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLS 688
Cdd:COG3210 98 SNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 689 FNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLF 768
Cdd:COG3210 178 PTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 769 LENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVrAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSAS 848
Cdd:COG3210 258 GTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTT-TNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTT 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 849 ATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPAL 928
Cdd:COG3210 337 ANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 929 SSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGL 1008
Cdd:COG3210 417 NGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTN 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1009 VITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVAL 1088
Cdd:COG3210 497 ATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGT 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1089 TYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDD 1168
Cdd:COG3210 577 SNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASA 656
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1169 TPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITyNWNASTNTLTAY 1248
Cdd:COG3210 657 NGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALA-NANGDTVTFGNL 735
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1249 RTGGALGVNDVFKIV------VNPTTGQYTFTLLAAINHHTVADNTEGLVDPFVN---LNYRVIDGDGDTAIGTLKVTID 1319
Cdd:COG3210 736 GTGATLTLNAGVTITsgnagtLSIGLTANTTASGTTLTLANANGNTSAGATLDNAgaeISIDITADGTITAAGTTAINVT 815
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1320 DDIPKAITPEEGFVTNQAGIVRTFDLDFDANIDNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSG 1399
Cdd:COG3210 816 GSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGT 895
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1400 NNVVEGWINGGPGDVGSTIVFRTTLQPDMNYNASNDTYKFELFQPISTSTNVSIANFSGVNATSREFIYLENASGPGEDI 1479
Cdd:COG3210 896 LTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSS 975
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1480 LFSAYIRNDNGSFTDATVNANAQGIGVNNQNMNDRENLRLDFVRNASTTGTNQNMTYEYDDHYLVNNFSFKIIQVTGNPL 1559
Cdd:COG3210 976 AVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISG 1055
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1560 TGSLEVWVRAYNADDDDPTNNTVSSANNLAHQDALRDDPQVALTQILVNGVPVTPTAVNASGGYLISGLNLNDTITIRSA 1639
Cdd:COG3210 1056 GNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTA 1135
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1640 NGYDRVEIENPRSGAHGVSNSSLNNETFDIGLFSYDTIKTTPSEININMGLSLTDSDGDKINSSIDINLAPSVFKVGENV 1719
Cdd:COG3210 1136 STEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTN 1215
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1720 DDTSNSNIPHRVGGDTGVVDGSAGADILVGDVGGVEVIGTTARLAFILDESGSMSQNFGGTTRlevlkQAMTDILTELSN 1799
Cdd:COG3210 1216 VTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAG-----ATATGSTVDIGS 1290
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1800 TPNASITVHLVKFASVVNGTGTFEITGGGLQQALDFISGLQIQQGLLAGTNYEAALGQTVQWFSSQSGTVDVQQTLFFTD 1879
Cdd:COG3210 1291 TSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGA 1370
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1880 GVPTFYMDGNSTEYTNLARVYGNGSQTEEVLWENLFGEHAGGQATSDRINNLTEFDPRDLDGLQSYSVDTNGDGIFETQS 1959
Cdd:COG3210 1371 AGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGG 1450
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1960 VNSRSSGTTQTTNDLVSSFADTFNEVQALQAYGTLRAVSIADNANVYLQEIDSTGQPYLANSPEVLQDILDELNPFNVLL 2039
Cdd:COG3210 1451 GNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGT 1530
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2040 AAGSDTIQANQEDDLIFGDVLFTDKLAEDEGLDLPKGSGWAVFEELEANHGWSRQDTLDYIRNHADELGRETVLSSGSKR 2119
Cdd:COG3210 1531 YGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYG 1610
|
1610 1620 1630 1640 1650 1660 1670
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 998834228 2120 SGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGTAPTDIIT 2191
Cdd:COG3210 1611 GTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGG 1682
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
377-1666 |
1.85e-18 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 93.68 E-value: 1.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 377 ATTVDPFNNTYGIPIGLVQNANLLDTSTSEMGGDYKNATMTHLLKITDAVSGLQTTDGTPINLFLESNGDITGRAGDVGA 456
Cdd:COG3210 394 ASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVT 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 457 PAVFAIRMNPNTGAISVAQYGPIKQFDTNSHDEAVDLTGRISAVVTAKDSDGDESNVEIPIGQLIVFEDDGPSIVVSGAT 536
Cdd:COG3210 474 NSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGAS 553
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 537 QTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALD 616
Cdd:COG3210 554 GTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAG 633
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 617 AATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGP 696
Cdd:COG3210 634 LTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSI 713
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 697 SIVVSGATQTLTVDESVLATNDTQSFAGLF------------TPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQ 764
Cdd:COG3210 714 TVTGQIGALANANGDTVTFGNLGTGATLTLnagvtitsgnagTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAE 793
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 765 VFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTldqVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDG 844
Cdd:COG3210 794 ISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTG---TGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSL 870
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 845 DSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSG 924
Cdd:COG3210 871 AATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQG 950
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 925 LPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAA 1004
Cdd:COG3210 951 NAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTAS 1030
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1005 ADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSG 1084
Cdd:COG3210 1031 ATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTT 1110
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1085 GVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVIT 1164
Cdd:COG3210 1111 TSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAAT 1190
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1165 VDDDTPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNT 1244
Cdd:COG3210 1191 EGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGAT 1270
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1245 LTAYRTGGALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPK 1324
Cdd:COG3210 1271 STVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANT 1350
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1325 AITPEEGFVTNQAGIVRTFDldfDANIDNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNNVVE 1404
Cdd:COG3210 1351 GLNGGNGATDSAAGAGSGGA---AGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTG 1427
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1405 GWINGGPGDVGSTIVFRTTLQPDMNYNASNDTYKFELFQPISTSTNVSIANFSGVNATSREFIYLENASGPGEDILFSAY 1484
Cdd:COG3210 1428 SSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTG 1507
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1485 IRNDNGSFTDATVNANAQGIGVNNQNMNDRENLRLDFVRNASTTGTNQNMTYEYDDHYLVNNFSFKIIQVTGNPLTGSLE 1564
Cdd:COG3210 1508 AGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQ 1587
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1565 VWVRAYNADDDDPTNNTVSSANNLAHQDALRDDPQVALTQILVNGVPVTPTAVNASGGYLISGLNLNDTITIRSANGYDR 1644
Cdd:COG3210 1588 APTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNG 1667
|
1290 1300
....*....|....*....|..
gi 998834228 1645 VEIENPRSGAHGVSNSSLNNET 1666
Cdd:COG3210 1668 WAVDLTDATLAGLGGATTAAAG 1689
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
657-2340 |
6.05e-18 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 91.75 E-value: 6.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 657 TQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGADGAA 736
Cdd:COG3210 1 GSGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 737 AANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPL 816
Cdd:COG3210 81 IGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 817 DPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAV 896
Cdd:COG3210 161 NTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 897 AASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPA 976
Cdd:COG3210 241 ISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 977 GADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVA 1056
Cdd:COG3210 321 TTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1057 TLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDI 1136
Cdd:COG3210 401 GSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1137 TINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGS 1216
Cdd:COG3210 481 SATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1217 IDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTGGALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVADNTEGLVDPFV 1296
Cdd:COG3210 561 SNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1297 NLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEGFVTNQAGIVRTFDLDFDANIDNNVGADQLGTITFFGITNGQVVTG 1376
Cdd:COG3210 641 AALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1377 TVDGVPNQTLTSGGSAIHYYVSGNNVVEGwINGGPGDVGSTIVFRTTLQ--PDMNYNASNDTYKFELFQPISTSTNVSIA 1454
Cdd:COG3210 721 ALANANGDTVTFGNLGTGATLTLNAGVTI-TSGNAGTLSIGLTANTTASgtTLTLANANGNTSAGATLDNAGAEISIDIT 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1455 NFSGVNATSREFIyleNASGPGEDILFSAYIRNDNGSFTDATVNANAQGIGVNNQNMNDRENLRLDFVRNASTTGTNQNM 1534
Cdd:COG3210 800 ADGTITAAGTTAI---NVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAAS 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1535 TYEYDDHYLVNNFSFKIIQVTGNPLTGSLEVWVRAYNADDDDPTNNTVSSANNLAHQDALRDDPQVALTQILVNGVPVTP 1614
Cdd:COG3210 877 ITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSA 956
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1615 TAVNASGGYLISGLNLNDTITIRSANGYDRVEIENPRSGahGVSNSSLNNETFDIGLFSYDTIKTTPSEININMGLSLTD 1694
Cdd:COG3210 957 ASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATG--ILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGT 1034
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1695 SDGDKINSSIDINLAPSVFKVGENVDDTSNSNIPHRVGGDTGVVDGSAGADILVGDVGGVEVIGTTARLAFILDESGSMS 1774
Cdd:COG3210 1035 GTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTG 1114
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1775 QNFGGTTRLEVLKQAMTDILTELSNTPNASITVHLVKFASVVNGTGTFEITGGGLQQALDFISGLQIQQGLLAGTNYEAA 1854
Cdd:COG3210 1115 GVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTA 1194
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1855 LGQTVQWFSSQSGTVDVQQTLFFTDGVPTFYMDGNSTEYTNLARVYGNGSQTEEVLWENLFGEHAGGQATSDRINNLTEF 1934
Cdd:COG3210 1195 GTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVA 1274
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1935 DPRDLDGLQSYSVDTNGDGIFETQSVNSRSSGTTQTTNDLVSSFADTFNEVQALQAYGTLRAVSIADNANVYLQEIDSTG 2014
Cdd:COG3210 1275 GNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNG 1354
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2015 QPYLANSPEVLQDILDELNPFNVLLAAGSDTIQANQEDDLIFGDVLFTDKLAEDEGLDLPKGSGWAVFEELEANHGWSRQ 2094
Cdd:COG3210 1355 GNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGT 1434
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2095 DTLDYIRNHADELGRETVLSSGSKRSGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFF 2174
Cdd:COG3210 1435 GGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGG 1514
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2175 RGHGSNNAGTAPTDIITDFEVNIDKIIINANNIIGVSVSNPVSNPDLSKTYTITVNYSDAPSIEHFKVTLSNGALLNDSG 2254
Cdd:COG3210 1515 TTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNT 1594
|
1610 1620 1630 1640 1650 1660 1670 1680
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2255 KTHLNGVVISGGTATIDGTIVGAVLYLDLNANNQEDAGERLGITNQYGHVEWVVDLSKFDVNGDGQYVIGEARAVQTGGF 2334
Cdd:COG3210 1595 ATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTD 1674
|
....*.
gi 998834228 2335 DIDTGL 2340
Cdd:COG3210 1675 ATLAGL 1680
|
|
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
864-1010 |
3.20e-17 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 85.81 E-value: 3.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 864 PVASTNKLTGVVDEDGLTGGIAggvgDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD- 942
Cdd:NF041514 179 PQFTTNQAVLTVFEDALPSGIP----DSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLKSGGIDLDYELSSDk 254
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 998834228 943 -TLTAS-AGSTQVFTFTLNANGNYSFTLLAKLDHPAgADEND---IAINLGSVIRAtdsdgdTVTAAADGLVI 1010
Cdd:NF041514 255 rTLTASePPGAEVMQFELTADGQLTQTLMDSIDHPT-ADSDDsewMRLDLSPLIDV------TFTRTSDGTVL 320
|
|
| T1SS_VCA0849 |
TIGR03661 |
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a ... |
2720-2818 |
4.52e-17 |
|
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a C-terminal domain associated with secretion by type 1 secretion systems (T1SS). Members of this subclass do not include the RtxA toxin of Vibrio cholerae and its homologs, although the two classes of proteins share large size, occurrence in genomes with T1SS, regions with long tandem repeats, and regions with the glycine-rich repeat modeled by pfam00353. [Cellular processes, Pathogenesis]
Pssm-ID: 274707 Cd Length: 88 Bit Score: 78.15 E-value: 4.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2720 DTITDFKANPvdqssdaSVLNLSDLLSDADLETNSLDNYLNVSTTEE-GDTAIKVDPNGNGNFDAPAQTIILEDVDLTAv 2798
Cdd:TIGR03661 1 DTITDFTLGE-------DKLDLSDLLSGEGVSSANLDQYLNVTTSGEdGNTVISVDSDGSAGSAAVTQTITLEGVDLSS- 72
|
90 100
....*....|....*....|
gi 998834228 2799 fatnNSHDIVNQMIANGNLI 2818
Cdd:TIGR03661 73 ----TSADIINQLLDNNQLI 88
|
|
| Legion_RtxA_N |
NF041514 |
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, ... |
1017-1173 |
7.13e-17 |
|
enhanced entry virulence factor RtxA, N-terminal domain; This HMM describes the N-terminal, non-repetitive portion of the Legionella virulence factor RxtA, named for the presence of tandem repeats-in-toxin (RTX) domains. RtxA can be four to six thousand amino acids long. In some isolates, the toxin is divided into two tandem ORFs but presumably re-form by recombination. RtxA is involved in adherence and cell entry.
Pssm-ID: 469400 [Multi-domain] Cd Length: 335 Bit Score: 84.66 E-value: 7.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1017 PIASANKLTGVVDEDGLTGGIAggvgDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGD- 1095
Cdd:NF041514 179 PQFTTNQAVLTVFEDALPSGIP----DSAGQARTASSSLSTLLTSSPDVAASFAFNTNLSALPTLKSGGIDLDYELSSDk 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1096 -TLTAS-AGSTQVFTFTLNANGNYSFTLLAKLDHPAgADEND---ITINLGSVIRAtdsdgdTVTAAADGLVI---TVDD 1167
Cdd:NF041514 255 rTLTASePPGAEVMQFELTADGQLTQTLMDSIDHPT-ADSDDsewMRLDLSPLIDV------TFTRTSDGTVLesrTLPA 327
|
....*.
gi 998834228 1168 DTPVTG 1173
Cdd:NF041514 328 NAVVAG 333
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
312-1501 |
3.06e-15 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 82.89 E-value: 3.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 312 DVTFTRASDGTVLESRTLPANAVVAGIQDDVPIARAQLTNNEILLDETIGMKAGDADAANDDFNPATTVDPFNNTYGIPI 391
Cdd:COG3210 512 TGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGG 591
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 392 GLVQNANLLDTSTSEMGGDYKNATMTHLLKITDAVSGLQTTDGTPINLFLESNGDITGRAGDVGAPAVFAIRMNPNTGAI 471
Cdd:COG3210 592 TGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTG 671
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 472 SVAQYGPIKQFDTNSHDEAVDLTGRISAVVTAKDSDGDESNVEIPIGQLIVFEDDGPSIVVSGATQTLTVdesVLATNDT 551
Cdd:COG3210 672 GGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGATL---TLNAGVT 748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 552 QSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGS 631
Cdd:COG3210 749 ITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATT 828
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 632 GNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDE 711
Cdd:COG3210 829 GLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASG 908
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 712 SVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVV 791
Cdd:COG3210 909 NGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTG 988
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 792 FNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKL 871
Cdd:COG3210 989 GVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAG 1068
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 872 TGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGST 951
Cdd:COG3210 1069 TTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGL 1148
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 952 QVFTFTLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDED 1031
Cdd:COG3210 1149 VAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTG 1228
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1032 GLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTL 1111
Cdd:COG3210 1229 NTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAG 1308
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1112 NANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLVADEDNLPRGNNDT 1191
Cdd:COG3210 1309 ANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAG 1388
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1192 ASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTGGALGVNDVFKIVVNPTTGQY 1271
Cdd:COG3210 1389 NNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGA 1468
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1272 TFTLLAAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEGFVTNQAGIVRTFDLDFDANI 1351
Cdd:COG3210 1469 GGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGA 1548
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1352 DNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNNVVEGWINGGPGDVGSTIVFRTTLQPDMNYN 1431
Cdd:COG3210 1549 VSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGA 1628
|
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1432 ASNDTYKFELFQPISTSTNVSIANFSGVNATSREFIYLENASGPGEDILFSAYIRNDNGSFTDATVNANA 1501
Cdd:COG3210 1629 NSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGDTAP 1698
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
338-509 |
1.57e-13 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 70.35 E-value: 1.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 338 IQDDVP-IARAQLTNNEILLDETigmkaGDADAANDDFNPATTVDPFNNTYGIpiglvqnanllDTSTSemggdyknATM 416
Cdd:pfam19116 3 FEDDGPsITASAGEAPTLTVDET-----ALGTGGGLADATASFAGLFTSDFGA-----------DGAGS--------TGS 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 417 THLLKITDAV-SGL-QTTDGTPINLFLEsNGDITGRAGDvGAPAVFAIRMNPNTGAISVAQYGPIKQFDTNSHDEAVDLT 494
Cdd:pfam19116 59 TYSLSLSAGAaSGLtDTATGQAILLFLE-GGVVVGRTAG-GGDVVFTVSVDAATGEVTLTQYRAVVHPDTSDPDDSVSLA 136
|
170
....*....|....*.
gi 998834228 495 -GRISAVVTAKDSDGD 509
Cdd:pfam19116 137 aGLITLTATVTDGDGD 152
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
1163-1308 |
1.22e-10 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 62.26 E-value: 1.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1163 ITVDDDTPV-----TGTISLVADEDNLprgnNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQ--------GMHGLSAVI 1229
Cdd:pfam19116 1 ISFEDDGPSitasaGEAPTLTVDETAL----GTGGGLADATASFAGLFTSDFGADGAGSTGSTyslslsagAASGLTDTA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1230 GNDNITYNWNAstNTLTAYRTGGALgvnDVFKIVVNPTTGQYTFTLLAAINHHTVADNTE--GLVDPFVNLNYRVIDGDG 1307
Cdd:pfam19116 77 TGQAILLFLEG--GVVVGRTAGGGD---VVFTVSVDAATGEVTLTQYRAVVHPDTSDPDDsvSLAAGLITLTATVTDGDG 151
|
.
gi 998834228 1308 D 1308
Cdd:pfam19116 152 D 152
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
857-999 |
2.27e-10 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 61.49 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 857 FNFEDDGPVASTNKLTG---VVDEDGLTGGiaggvgdvaGQAVAASGNVATLFQS--GADAP----LTYSLNAST---SG 924
Cdd:pfam19116 1 ISFEDDGPSITASAGEAptlTVDETALGTG---------GGLADATASFAGLFTSdfGADGAgstgSTYSLSLSAgaaSG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 925 LPALSSGGVALTYAVSGDTLTASAGSTQ-VFTFTLNAN-GNYSFTLLAKLDHPAGADENDiAINLGS-----VIRATDSD 997
Cdd:pfam19116 72 LTDTATGQAILLFLEGGVVVGRTAGGGDvVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDD-SVSLAAglitlTATVTDGD 150
|
..
gi 998834228 998 GD 999
Cdd:pfam19116 151 GD 152
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
2128-2195 |
5.75e-10 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 62.00 E-value: 5.75e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 2128 GGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNnagTAPTDIITDFEV 2195
Cdd:pfam08548 86 GGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSL---TAAPDTIRDFVS 150
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
1002-1440 |
7.88e-10 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 64.58 E-value: 7.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1002 TAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPAL 1081
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1082 SSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGL 1161
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1162 VITVDDDTPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNAS 1241
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1242 TNTLTAYRTGGALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDD 1321
Cdd:COG3468 241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1322 IPKAITPEEGFVTNQAGIVRTFDLDFDANIDNNVGADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNN 1401
Cdd:COG3468 321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGT 400
|
410 420 430
....*....|....*....|....*....|....*....
gi 998834228 1402 VVEGWINGGPGDVGSTIVFRTTLQPDMNYNASNDTYKFE 1440
Cdd:COG3468 401 GNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTLVLN 439
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
702-1221 |
8.76e-10 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 64.80 E-value: 8.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 702 GATQTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSD 781
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 782 ALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFED 861
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 862 DGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSG 941
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 942 DTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASA 1021
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1022 NKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASA 1101
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1102 GSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLVADE 1181
Cdd:COG4625 401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTG 480
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 998834228 1182 DNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQG 1221
Cdd:COG4625 481 NNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTG 520
|
|
| DUF5801 |
pfam19116 |
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as ... |
1010-1152 |
4.82e-09 |
|
Domain of unknown function (DUF5801); This entry contains a presumed domain that is found as tandem repeats in a number of bacterial proteins.
Pssm-ID: 465976 [Multi-domain] Cd Length: 152 Bit Score: 57.64 E-value: 4.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1010 ITVDDDTPIASANKLTG---VVDEDGLTGGiaggvgdvaGQAVAASGNVATLFQS--GADAP----LTYSLNAST---SG 1077
Cdd:pfam19116 1 ISFEDDGPSITASAGEAptlTVDETALGTG---------GGLADATASFAGLFTSdfGADGAgstgSTYSLSLSAgaaSG 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1078 LPALSSGGVALTYAVSGDTLTASAGSTQ-VFTFTLNAN-GNYSFTLLAKLDHPAGADEND-ITINLGSV---IRATDSDG 1151
Cdd:pfam19116 72 LTDTATGQAILLFLEGGVVVGRTAGGGDvVFTVSVDAAtGEVTLTQYRAVVHPDTSDPDDsVSLAAGLItltATVTDGDG 151
|
.
gi 998834228 1152 D 1152
Cdd:pfam19116 152 D 152
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
829-1246 |
7.88e-09 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 61.50 E-value: 7.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 829 AANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQS 908
Cdd:COG3468 5 GGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGT 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 909 GADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDIAINLG 988
Cdd:COG3468 85 GGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 989 SVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLT 1068
Cdd:COG3468 165 GGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1069 YSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATD 1148
Cdd:COG3468 245 AGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1149 SDGDTVTAAADGLVITVDDDTPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAV 1228
Cdd:COG3468 325 GSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNG 404
|
410 420
....*....|....*....|
gi 998834228 1229 IGNDNITYN--WNASTNTLT 1246
Cdd:COG3468 405 GGGVGGGGGggLTLTGGTLT 424
|
|
| VWA_2 |
pfam13519 |
von Willebrand factor type A domain; |
1763-1869 |
4.05e-08 |
|
von Willebrand factor type A domain;
Pssm-ID: 463909 [Multi-domain] Cd Length: 103 Bit Score: 53.45 E-value: 4.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1763 LAFILDESGSMSQNFGGTTRLEVLKQAMTDILTELSNTpnasiTVHLVKFASVVNGTGTFeitGGGLQQALDFISGLQIQ 1842
Cdd:pfam13519 1 LVFVLDTSGSMRNGDYGPTRLEAAKDAVLALLKSLPGD-----RVGLVTFGDGPEVLIPL---TKDRAKILRALRRLEPK 72
|
90 100
....*....|....*....|....*..
gi 998834228 1843 QGllaGTNYEAALGQTVQWFSSQSGTV 1869
Cdd:pfam13519 73 GG---GTNLAAALQLARAALKHRRKNQ 96
|
|
| vWFA |
cd00198 |
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation ... |
1761-1898 |
9.91e-08 |
|
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.
Pssm-ID: 238119 [Multi-domain] Cd Length: 161 Bit Score: 54.11 E-value: 9.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1761 ARLAFILDESGSMSQnfggtTRLEVLKQAMTDILTELSNTPNASiTVHLVKFASVVNGTGTFEiTGGGLQQALDFISGLQ 1840
Cdd:cd00198 1 ADIVFLLDVSGSMGG-----EKLDKAKEALKALVSSLSASPPGD-RVGLVTFGSNARVVLPLT-TDTDKADLLEAIDALK 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 998834228 1841 IQQGllAGTNYEAALGQTVQWFSSQSGTVDVQQTLFFTDGVPTFYMDGNSTEYTNLAR 1898
Cdd:cd00198 74 KGLG--GGTNIGAALRLALELLKSAKRPNARRVIILLTDGEPNDGPELLAEAARELRK 129
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
886-1390 |
1.45e-07 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 57.48 E-value: 1.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 886 GGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYS 965
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 966 FTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVA 1045
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1046 GQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKL 1125
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1126 DHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLVADEDNLPRGNNDTASGDAAQSNLTGTL 1205
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1206 PVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTGGALGVNDVFKIVVNPTTGQYTFTLLAAINHHTVA 1285
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1286 DNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEGFVTNQAGIVRTFDLDFDANIDNNVGADQLGTITF 1365
Cdd:COG4625 401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTG 480
|
490 500
....*....|....*....|....*
gi 998834228 1366 FGITNGQVvtgTVDGVPNQTLTSGG 1390
Cdd:COG4625 481 NNTYTGTT---TVNGGGNYTQSAGS 502
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
653-1143 |
1.67e-07 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 57.10 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 653 STGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGlfTPSFGA 732
Cdd:COG4625 34 GGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGG--GGGGGG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 733 DGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVH 812
Cdd:COG4625 112 GGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 813 DNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVA 892
Cdd:COG4625 192 GNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGG 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 893 GQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKL 972
Cdd:COG4625 272 GGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 973 DHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAAS 1052
Cdd:COG4625 352 GGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGG 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1053 GNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGAD 1132
Cdd:COG4625 432 GGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAA 511
|
490
....*....|.
gi 998834228 1133 ENDITINLGSV 1143
Cdd:COG4625 512 NSDRLVVTGTA 522
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
681-1118 |
2.10e-07 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 56.88 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 681 ATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTA 760
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 761 SGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVAT 840
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 841 DKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNA 920
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 921 STSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLlakldhpaGADENDIAINLGSVIRATDSDGDT 1000
Cdd:COG3468 241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGG--------GGASGTGGGGTASTGGGGGGGGGN 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1001 VTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPA 1080
Cdd:COG3468 313 GGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVG 392
|
410 420 430
....*....|....*....|....*....|....*...
gi 998834228 1081 LSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYS 1118
Cdd:COG3468 393 TGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYT 430
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2128-2162 |
3.52e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 48.59 E-value: 3.52e-07
10 20 30
....*....|....*....|....*....|....*
gi 998834228 2128 GGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTL 2162
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2674-2708 |
7.13e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 47.82 E-value: 7.13e-07
10 20 30
....*....|....*....|....*....|....*
gi 998834228 2674 GGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTF 2708
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
797-1541 |
1.64e-06 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 53.99 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 797 DGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVD 876
Cdd:COG3209 11 TGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 877 EDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTF 956
Cdd:COG3209 91 GGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 957 TLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGG 1036
Cdd:COG3209 171 LTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1037 IAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGN 1116
Cdd:COG3209 251 AVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAA 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1117 YSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLVADEDNLPRGNNDTASGDA 1196
Cdd:COG3209 331 DAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTT 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1197 AQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTGGALGVNDVFKIVVNPTTGQYTFTLL 1276
Cdd:COG3209 411 STTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGS 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1277 AAINHHTVADNTEGLVDPFVNLNYRVIDGDGDTAIGTLKVTIDDDIPKAITPEEGFVTNQAGIVRTFDLDFDANIDNNVG 1356
Cdd:COG3209 491 AGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTT 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1357 ADQLGTITFFGITNGQVVTGTVDGVPNQTLTSGGSAIHYYVSGNNVVEGWINGGPGDVGSTIVFRTTLQPDMNYNASNDT 1436
Cdd:COG3209 571 TGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVT 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1437 YKFELFQPISTSTNV----------SIANFSGVNATSREFIYLENASGPGEDILFSAYIRNDNGSFTDATVNANAQGIGV 1506
Cdd:COG3209 651 TTGTTTTRATGTTGTgtgvtaglttLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGT 730
|
730 740 750
....*....|....*....|....*....|....*
gi 998834228 1507 NNQNMNDRENLRLDFVRNASTTGTNQNMTYEYDDH 1541
Cdd:COG3209 731 TTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDAL 765
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
2674-2726 |
1.86e-06 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 51.60 E-value: 1.86e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 998834228 2674 GGNGNDV---------LHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD--GGVDTITDFK 2726
Cdd:pfam08548 86 GGSGNDVligndadniLKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSltAAPDTIRDFV 149
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
779-1251 |
2.30e-06 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 53.63 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 779 GSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFN 858
Cdd:COG4625 4 GGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 859 FEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYA 938
Cdd:COG4625 84 GGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 939 VSGDTLTASAGSTQVFTFTLNANGNYSFTLLAkldhPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPI 1018
Cdd:COG4625 164 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGG----GGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1019 ASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLT 1098
Cdd:COG4625 240 GGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1099 ASAGSTQVFTFTLNANGNYSFTLLAKLDHPAGADENDITINLGSVIRATDSDGDTVTAAADGLVITVDDDTPVTGTISLV 1178
Cdd:COG4625 320 GGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGG 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 998834228 1179 ADEDNLPRGNNDTASGDAAQSNLTGTLPVNFGADGAGSIDFQGMHGLSAVIGNDNITYNWNASTNTLTAYRTG 1251
Cdd:COG4625 400 GGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSG 472
|
|
| TerY |
COG4245 |
Uncharacterized conserved protein YegL, contains vWA domain of TerY type [Function unknown]; |
1765-1883 |
2.61e-06 |
|
Uncharacterized conserved protein YegL, contains vWA domain of TerY type [Function unknown];
Pssm-ID: 443387 [Multi-domain] Cd Length: 196 Bit Score: 50.69 E-value: 2.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1765 FILDESGSMSqnfggTTRLEVLKQAMTDILTELSNTPNASITVHLvkfaSVVngtgTFeitGGGLQQALDF--ISGLQIQ 1842
Cdd:COG4245 10 LLLDTSGSMS-----GEPIEALNEGLQALIDELRQDPYALETVEV----SVI----TF---DGEAKVLLPLtdLEDFQPP 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 998834228 1843 QgLLA--GTNYEAALG------QTVQWFSSQSGTVDVQQTLFF-TDGVPT 1883
Cdd:COG4245 74 D-LSAsgGTPLGAALEllldliERRVQKYTAEGKGDWRPVVFLiTDGEPT 122
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
574-965 |
3.02e-06 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 53.03 E-value: 3.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 574 TYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDES 653
Cdd:COG3468 39 GGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 654 TGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGAD 733
Cdd:COG3468 119 GGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGG 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 734 GAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHD 813
Cdd:COG3468 199 GGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGG 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 814 NPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAG 893
Cdd:COG3468 279 GANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALA 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 998834228 894 QAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYS 965
Cdd:COG3468 359 GTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYT 430
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2136-2171 |
5.59e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 45.12 E-value: 5.59e-06
10 20 30
....*....|....*....|....*....|....*.
gi 998834228 2136 YGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQF 2171
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2120-2153 |
1.20e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 44.35 E-value: 1.20e-05
10 20 30
....*....|....*....|....*....|....
gi 998834228 2120 SGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVI 2153
Cdd:pfam00353 3 GDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2121-2214 |
2.67e-05 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 48.36 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2121 GGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGTAPTDIITDFEVNIDKI 2200
Cdd:COG2931 137 AGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDG 216
|
90
....*....|....
gi 998834228 2201 IINANNIIGVSVSN 2214
Cdd:COG2931 217 GDGDDGLGGGGGDD 230
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
494-1051 |
4.66e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 49.01 E-value: 4.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 494 TGRISAVVTAKDSDGDESNVEIPIGQLIVFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGADGAAAANAL 573
Cdd:COG4625 24 GGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 574 TYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDES 653
Cdd:COG4625 104 GGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGG 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 654 TGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGAD 733
Cdd:COG4625 184 GGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 734 GAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHD 813
Cdd:COG4625 264 AGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 814 NPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVAG 893
Cdd:COG4625 344 GAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGG 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 894 QAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSG--DTLTASAGSTQVFTFTLNANGNYSFTLLAK 971
Cdd:COG4625 424 GGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSgaGTLTLTGNNTYTGTTTVNGGGNYTQSAGST 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 972 LDHPAGADENDIAINLGSViratDSDGDTVTAAADGLVITvDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAA 1051
Cdd:COG4625 504 LAVEVDAANSDRLVVTGTA----TLNGGTVVVLAGGYAPG-TTYTILAVAAALDALAGNGDLSALYNALAALDAAAARAA 578
|
|
| YfbK |
COG2304 |
Secreted protein containing bacterial Ig-like domain and vWFA domain [General function ... |
1763-1883 |
8.48e-05 |
|
Secreted protein containing bacterial Ig-like domain and vWFA domain [General function prediction only];
Pssm-ID: 441879 [Multi-domain] Cd Length: 289 Bit Score: 47.02 E-value: 8.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1763 LAFILDESGSMSQNfggttRLEVLKQAMTDILTELsntpNASITVHLVKFAS----VVNGTgtfeiTGGGLQQALDFISG 1838
Cdd:COG2304 94 LVFVIDVSGSMSGD-----KLELAKEAAKLLVDQL----RPGDRVSIVTFAGdarvLLPPT-----PATDRAKILAAIDR 159
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 998834228 1839 LQiqqgllAG--TNYEAALGQTVQWFSSQSGTVDVQQTLFFTDGVPT 1883
Cdd:COG2304 160 LQ------AGggTALGAGLELAYELARKHFIPGRVNRVILLTDGDAN 200
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2120-2192 |
1.07e-04 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 46.44 E-value: 1.07e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 998834228 2120 SGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGTAPTDIITD 2192
Cdd:COG2931 127 GAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGG 199
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
879-1158 |
1.85e-04 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 47.04 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 879 GLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTsglpalSSGGVALTYAVSGDTLTASAGSTqvfTFTL 958
Cdd:PRK08026 169 GLDGFNVNGKGTVANTAATVSDLTAAGATLDTTGLYDVKTKNAA------LTTADALAKLGDGDKVTATATGG---DYTY 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 959 NA-NGNYSFTLLAKLDHPAGAD--ENDIAINLGSVIRATDSDGdTVTAAADGLVITVDDDTPIASANKLTgVVDEDGLTG 1035
Cdd:PRK08026 240 NAkSGKYQAADLAATLTPDVGGtaGASYTIKDGTYEVNVDSDG-KITLGGSALYIDATGNLTTNNAGAAT-KATLDALKK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1036 GIAGGVGDVAGQAVAASGNVATlfqsGADAPLTYSLNASTSGlpALSSGGVAL-----TYAVSGDTLTASAGSTqvfTFT 1110
Cdd:PRK08026 318 TASEGAATAKAALAAAGVTVAD----GVTAKTVKMSYTDKNG--KVIDGGYAVktgddYYAADYDEITGAISAT---TTY 388
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 998834228 1111 LNANGNYSFTLLAKLDHpAGADENDITINlGSVIRATDSDGDTVTAAA 1158
Cdd:PRK08026 389 YTAKDGTTKTAANKLGG-ADGKTEVVTID-GKTYVASDGKQTTLAEAA 434
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
555-1040 |
2.08e-04 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 47.08 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 555 AGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNV 634
Cdd:COG4625 11 GGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 635 TLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVL 714
Cdd:COG4625 91 GGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 715 ATNDTQSFAGLFTPSFGADGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNI 794
Cdd:COG4625 171 GGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 795 SVDGSGNVTLDQVRAVVHDNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGV 874
Cdd:COG4625 251 GGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 875 VDEDGLTGGIAGGVGDVAGQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVF 954
Cdd:COG4625 331 GGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGG 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 955 TFTLNANGNYSFTLLAKLDHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTpiASANKLTGVVDEDGLT 1034
Cdd:COG4625 411 GGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSG--AGTLTLTGNNTYTGTT 488
|
....*.
gi 998834228 1035 GGIAGG 1040
Cdd:COG4625 489 TVNGGG 494
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2120-2184 |
3.25e-04 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 45.28 E-value: 3.25e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 998834228 2120 SGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGT 2184
Cdd:COG2931 118 GDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGA 182
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2682-2715 |
8.19e-04 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 38.96 E-value: 8.19e-04
10 20 30
....*....|....*....|....*....|....
gi 998834228 2682 HGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD 2715
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGND 34
|
|
| ChlD |
COG1240 |
vWFA (von Willebrand factor type A) domain of Mg and Co chelatases [Coenzyme transport and ... |
1761-1883 |
8.60e-04 |
|
vWFA (von Willebrand factor type A) domain of Mg and Co chelatases [Coenzyme transport and metabolism];
Pssm-ID: 440853 [Multi-domain] Cd Length: 262 Bit Score: 43.77 E-value: 8.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1761 ARLAFILDESGSMsqnfGGTTRLEVLKQAMTDILTELSNTpnasITVHLVKFAS----VVNGTGTfeitgggLQQALDFI 1836
Cdd:COG1240 93 RDVVLVVDASGSM----AAENRLEAAKGALLDFLDDYRPR----DRVGLVAFGGeaevLLPLTRD-------REALKRAL 157
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 998834228 1837 SGLQIQQgllaGTNYEAALGQTVQWFSSQSGTVDVqQTLFFTDGVPT 1883
Cdd:COG1240 158 DELPPGG----GTPLGDALALALELLKRADPARRK-VIVLLTDGRDN 199
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
2672-2699 |
1.51e-03 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 38.19 E-value: 1.51e-03
10 20
....*....|....*....|....*...
gi 998834228 2672 LNGGNGNDVLHGTTGNDFIRGGQGNDTM 2699
Cdd:pfam00353 9 LVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2660-2771 |
1.63e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 42.97 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2660 DHSLTMLANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDDGGVDTITDFKANPVDQSSDASVL 2739
Cdd:COG2931 139 NDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGD 218
|
90 100 110
....*....|....*....|....*....|..
gi 998834228 2740 NLSDLLSDADLETNSLDNYLNVSTTEEGDTAI 2771
Cdd:COG2931 219 GDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGL 250
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2121-2211 |
1.68e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 42.97 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2121 GGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFVFFRGHGSNNAGTAPTDIITDFEVNIDKI 2200
Cdd:COG2931 155 AGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGG 234
|
90
....*....|.
gi 998834228 2201 IINANNIIGVS 2211
Cdd:COG2931 235 GGGGDGGGGGG 245
|
|
| VWA |
smart00327 |
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins ... |
1763-1887 |
2.12e-03 |
|
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Pssm-ID: 214621 [Multi-domain] Cd Length: 175 Bit Score: 41.67 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 1763 LAFILDESGSMSQNfggttRLEVLKQAMTDILTELSNTPNaSITVHLVKFASVVngtgTFEITGGGLQQALDFISGLQ-I 1841
Cdd:smart00327 2 VVFLLDGSGSMGGN-----RFELAKEFVLKLVEQLDIGPD-GDRVGLVTFSDDA----RVLFPLNDSRSKDALLEALAsL 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 998834228 1842 QQGLLAGTNYEAALGQTVQ-WFSSQSGT-VDVQQTL-FFTDGVPTFYMD 1887
Cdd:smart00327 72 SYKLGGGTNLGAALQYALEnLFSKSAGSrRGAPKVViLITDGESNDGPK 120
|
|
| retention_LapA |
NF033682 |
retention module-containing protein; The retention module, as described for the giant adhesin ... |
5-138 |
3.67e-03 |
|
retention module-containing protein; The retention module, as described for the giant adhesin LapA of Pseudomonas fluorescens and for an ice-binding giant adhesin of an Antarctic bacterium, appears at the N-terminus of a number of very large repetitive proteins, many of which have C-terminal regions that make them substrates for type I secretion systems.
Pssm-ID: 468140 Cd Length: 145 Bit Score: 40.31 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 5 SVIGIVRAVNGLLEKVNAQGHASLVKSGARLEEGDVL-TLLSGEAYIQFIHGFPEALALGKPVKLDGVSPALQYGVEELN 83
Cdd:NF033682 1 TQVAVVKAVSGTVFAVNADGSVRVLKVGDTLQAGEIViTGNGAAVELQLADGSTLTLGENCVACVTEDNGLIEFDAEEAA 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 998834228 84 E--------QLVQEALAKGIDPSVILDvlGSAAAGAEAVGSGGDAFI-IDPLFGFGQVTAGYPT 138
Cdd:NF033682 81 AasfddpdiAAIQAAILAGADPTELLE--ATAAGLAGGAGGAGGGFVtIDRNGDEVLPSTGFPT 142
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2120-2172 |
5.76e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 41.05 E-value: 5.76e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 998834228 2120 SGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIVGGTGNDTLTGGSGADQFV 2172
Cdd:COG2931 109 GGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLY 161
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2666-2782 |
7.08e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 41.05 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2666 LANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDDGGVDTITDFKANPVDQSSDASVLNLSDLL 2745
Cdd:COG2931 136 GAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLD 215
|
90 100 110
....*....|....*....|....*....|....*..
gi 998834228 2746 SDADLETNSLDNYLNVSTTEEGDTAIKVDPNGNGNFD 2782
Cdd:COG2931 216 GGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGLGG 252
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
573-1051 |
8.05e-03 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 41.68 E-value: 8.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 573 LTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVHDNPLDPDE 652
Cdd:COG5295 117 ATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATATGSSTANAATAAAGATSTSASGSSSGASGAAAASAAT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 653 STGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPSIVVSGATQTLTVDESVLATNDTQSFAGLFTPSFGA 732
Cdd:COG5295 197 GASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 733 DGAAAANALTYSLGVSANGAASGVLDTASGNQVFLFLENGIVVGREGSDALDAATGDVVFNISVDGSGNVTLDQVRAVVH 812
Cdd:COG5295 277 ASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSA 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 813 DNPLDPDESTGPTQLNAANLVTLTAVATDKDGDSASATANIGLSFNFEDDGPVASTNKLTGVVDEDGLTGGIAGGVGDVA 892
Cdd:COG5295 357 AADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGAS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 893 GQAVAASGNVATLFQSGADAPLTYSLNASTSGLPALSSGGVALTYAVSGDTLTASAGSTQVFTFTLNANGNYSFTLLAKL 972
Cdd:COG5295 437 NGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAG 516
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 998834228 973 DHPAGADENDIAINLGSVIRATDSDGDTVTAAADGLVITVDDDTPIASANKLTGVVDEDGLTGGIAGGVGDVAGQAVAA 1051
Cdd:COG5295 517 GAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAA 595
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
2659-2783 |
8.24e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 40.66 E-value: 8.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 998834228 2659 DDHSLTMLANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD----DGGVDTITDFKANPVDQSS 2734
Cdd:COG2931 120 GNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDtltgGAGNDTLTGGAGNDTLDGG 199
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 998834228 2735 DASVLNLSDLLSDADLETNSLDNYLNVSTTEEGDTAIKVDPNGNGNFDA 2783
Cdd:COG2931 200 GGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDD 248
|
|
| |
