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Conserved domains on  [gi|141043549|gb|ECP24403|]
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hypothetical protein GOS_5758413, partial [marine metagenome]

Protein Classification

ribose-phosphate pyrophosphokinase-like domain-containing protein( domain architecture ID 10619030)

ribose-phosphate pyrophosphokinase-like domain-containing protein which contains the N-terminal domain of ribose-phosphate pyrophosphokinase and phosphoribosyl pyrophosphate synthetase-associated proteins, which play roles in 5-phospho-ribosyl-1(alpha)-pyrophosphate (PRPP) synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pribosyltran_N pfam13793
N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found ...
 5-121 2.76e-68

N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found N-terminal to the Pribosyltran, pfam00156.


:

Pssm-ID: 433483 [Multi-domain]  Cd Length: 117  Bit Score: 200.72  E-value: 2.76e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549    5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:pfam13793   1 LKIFSGNSNPELAEKIAKRLGIPLGKATVSRFSDGEIYVRIEESVRGKDVFIIQSTCPPVNDNLMELLIMIDALKRASAK 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 141043549   85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:pfam13793  81 RITAVIPYFGYARQDRKDKPREPITAKLVADLLEAAG 117
 
Name Accession Description Interval E-value
Pribosyltran_N pfam13793
N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found ...
 5-121 2.76e-68

N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found N-terminal to the Pribosyltran, pfam00156.


Pssm-ID: 433483 [Multi-domain]  Cd Length: 117  Bit Score: 200.72  E-value: 2.76e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549    5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:pfam13793   1 LKIFSGNSNPELAEKIAKRLGIPLGKATVSRFSDGEIYVRIEESVRGKDVFIIQSTCPPVNDNLMELLIMIDALKRASAK 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 141043549   85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:pfam13793  81 RITAVIPYFGYARQDRKDKPREPITAKLVADLLEAAG 117
PRK01259 PRK01259
ribose-phosphate diphosphokinase;
5-121 7.32e-68

ribose-phosphate diphosphokinase;


Pssm-ID: 234929 [Multi-domain]  Cd Length: 309  Bit Score: 206.51  E-value: 7.32e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:PRK01259   1 MKLFAGNANPELAEKIAKYLGIPLGKASVGRFSDGEISVEINENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRASAG 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK01259  81 RITAVIPYFGYARQDRKARSRVPITAKLVANLLETAG 117
PrsA COG0462
Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism]; ...
 5-121 8.44e-68

Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism]; Phosphoribosylpyrophosphate synthetase is part of the Pathway/BioSystem: Histidine biosynthesis, Purine biosynthesis


Pssm-ID: 440230 [Multi-domain]  Cd Length: 311  Bit Score: 206.45  E-value: 8.44e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:COG0462    4 LKIFSGNANPELAEEIAEYLGVPLGKAEVRRFSDGEIYVRIEESVRGRDVFVIQSTSPPVNDNLMELLIMIDALKRASAR 83

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:COG0462   84 RITAVIPYYGYARQDRKFRPREPITAKLVADLLEAAG 120
ribP_PPkin TIGR01251
ribose-phosphate pyrophosphokinase; Alternate name: phosphoribosylpyrophosphate synthetase In ...
 5-121 5.00e-52

ribose-phosphate pyrophosphokinase; Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273523 [Multi-domain]  Cd Length: 308  Bit Score: 165.91  E-value: 5.00e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549    5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFII-QSISSPANDNLMEMLLCIDALKRSSA 83
Cdd:TIGR01251   1 MKIFSGSSNQELAQKVAKNLGLPLGDVEVKRFPDGELYVRINESVRGKDVFIIqQSTSAPVNDNLMELLIMIDALKRASA 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 141043549   84 KNITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:TIGR01251  81 KSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAG 118
 
Name Accession Description Interval E-value
Pribosyltran_N pfam13793
N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found ...
 5-121 2.76e-68

N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found N-terminal to the Pribosyltran, pfam00156.


Pssm-ID: 433483 [Multi-domain]  Cd Length: 117  Bit Score: 200.72  E-value: 2.76e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549    5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:pfam13793   1 LKIFSGNSNPELAEKIAKRLGIPLGKATVSRFSDGEIYVRIEESVRGKDVFIIQSTCPPVNDNLMELLIMIDALKRASAK 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 141043549   85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:pfam13793  81 RITAVIPYFGYARQDRKDKPREPITAKLVADLLEAAG 117
PRK01259 PRK01259
ribose-phosphate diphosphokinase;
5-121 7.32e-68

ribose-phosphate diphosphokinase;


Pssm-ID: 234929 [Multi-domain]  Cd Length: 309  Bit Score: 206.51  E-value: 7.32e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:PRK01259   1 MKLFAGNANPELAEKIAKYLGIPLGKASVGRFSDGEISVEINENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRASAG 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK01259  81 RITAVIPYFGYARQDRKARSRVPITAKLVANLLETAG 117
PrsA COG0462
Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism]; ...
 5-121 8.44e-68

Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism]; Phosphoribosylpyrophosphate synthetase is part of the Pathway/BioSystem: Histidine biosynthesis, Purine biosynthesis


Pssm-ID: 440230 [Multi-domain]  Cd Length: 311  Bit Score: 206.45  E-value: 8.44e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:COG0462    4 LKIFSGNANPELAEEIAEYLGVPLGKAEVRRFSDGEIYVRIEESVRGRDVFVIQSTSPPVNDNLMELLIMIDALKRASAR 83

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:COG0462   84 RITAVIPYYGYARQDRKFRPREPITAKLVADLLEAAG 120
ribP_PPkin TIGR01251
ribose-phosphate pyrophosphokinase; Alternate name: phosphoribosylpyrophosphate synthetase In ...
 5-121 5.00e-52

ribose-phosphate pyrophosphokinase; Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273523 [Multi-domain]  Cd Length: 308  Bit Score: 165.91  E-value: 5.00e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549    5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFII-QSISSPANDNLMEMLLCIDALKRSSA 83
Cdd:TIGR01251   1 MKIFSGSSNQELAQKVAKNLGLPLGDVEVKRFPDGELYVRINESVRGKDVFIIqQSTSAPVNDNLMELLIMIDALKRASA 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 141043549   84 KNITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:TIGR01251  81 KSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAG 118
PLN02369 PLN02369
ribose-phosphate pyrophosphokinase
 16-121 7.37e-48

ribose-phosphate pyrophosphokinase


Pssm-ID: 215209 [Multi-domain]  Cd Length: 302  Bit Score: 155.24  E-value: 7.37e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549  16 LSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAKNITAVIPYFGY 95
Cdd:PLN02369   3 LSQEIACYLGLELGKITIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVIPYFGY 82

                         90       100
                 ....*....|....*....|....*.
gi 141043549  96 ARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PLN02369  83 ARADRKTQGRESIAAKLVANLITEAG 108
PRK02812 PRK02812
ribose-phosphate pyrophosphokinase; Provisional
 5-121 1.05e-46

ribose-phosphate pyrophosphokinase; Provisional


Pssm-ID: 235072 [Multi-domain]  Cd Length: 330  Bit Score: 152.97  E-value: 1.05e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:PRK02812  22 LRLFSGSSNPALAQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPTCAPVNDHLMELLIMVDACRRASAR 101

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK02812 102 QITAVIPYYGYARADRKTAGRESITAKLVANLITKAG 138
PRK02269 PRK02269
ribose-phosphate diphosphokinase;
5-121 1.16e-46

ribose-phosphate diphosphokinase;


Pssm-ID: 167353 [Multi-domain]  Cd Length: 320  Bit Score: 152.64  E-value: 1.16e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAK 84
Cdd:PRK02269   6 LKLFALSSNKELAEKVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALKRASAE 85

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 141043549  85 NITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK02269  86 SINVVMPYYGYARQDRKARSREPITSKLVANMLEVAG 122
PRK02458 PRK02458
ribose-phosphate pyrophosphokinase; Provisional
 3-121 1.72e-45

ribose-phosphate pyrophosphokinase; Provisional


Pssm-ID: 235039 [Multi-domain]  Cd Length: 323  Bit Score: 149.50  E-value: 1.72e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   3 KIMKLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSS 82
Cdd:PRK02458   8 KQIKLFSLNSNLEIAEKIAQAAGVPLGKLSSRQFSDGEIMINIEESVRGDDIYIIQSTSFPVNDHLWELLIMIDACKRAS 87

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 141043549  83 AKNITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK02458  88 ANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVKAG 126
PRK04923 PRK04923
ribose-phosphate diphosphokinase;
7-121 9.95e-40

ribose-phosphate diphosphokinase;


Pssm-ID: 179893 [Multi-domain]  Cd Length: 319  Bit Score: 134.67  E-value: 9.95e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   7 LLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAKNI 86
Cdd:PRK04923   9 VFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPSAENLMELLVLIDALKRASAASV 88

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 141043549  87 TAVIPYFGYARQDRKV-VPRTSISAKLVSNLITKAG 121
Cdd:PRK04923  89 TAVIPYFGYSRQDRRMrSSRVPITAKVAAKMISAMG 124
PRK03092 PRK03092
ribose-phosphate diphosphokinase;
16-121 4.31e-39

ribose-phosphate diphosphokinase;


Pssm-ID: 179535 [Multi-domain]  Cd Length: 304  Bit Score: 132.76  E-value: 4.31e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549  16 LSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAKNITAVIPYFGY 95
Cdd:PRK03092   1 LAEEVAKELGVEVTPTTAYDFANGEIYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPFYPY 80

                         90       100
                 ....*....|....*....|....*.
gi 141043549  96 ARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK03092  81 ARQDKKHRGREPISARLVADLFKTAG 106
PRK00553 PRK00553
ribose-phosphate pyrophosphokinase; Provisional
 5-121 1.51e-38

ribose-phosphate pyrophosphokinase; Provisional


Pssm-ID: 179062 [Multi-domain]  Cd Length: 332  Bit Score: 131.96  E-value: 1.51e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   5 MKLLTGNSN---------KKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCI 75
Cdd:PRK00553   1 MHLSIDKSNhvifslskaKKLVDSICRKLSMKPGEIVIQKFADGETYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAI 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 141043549  76 DALKRSSAKNITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PRK00553  81 DALKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTKAG 126
PTZ00145 PTZ00145
phosphoribosylpyrophosphate synthetase; Provisional
 7-121 1.26e-36

phosphoribosylpyrophosphate synthetase; Provisional


Pssm-ID: 240290 [Multi-domain]  Cd Length: 439  Bit Score: 128.84  E-value: 1.26e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   7 LLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPANDNLMEMLLCIDALKRSSAKNI 86
Cdd:PTZ00145 122 LFSGSSNPLLSKNIADHLGTILGRVHLKRFADGEVSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCRRASAKKI 201

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 141043549  87 TAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAG 121
Cdd:PTZ00145 202 TAVIPYYGYARQDRKLSSRVPISAADVARMIEAMG 236
PRK00934 PRK00934
ribose-phosphate pyrophosphokinase; Provisional
 6-123 9.47e-33

ribose-phosphate pyrophosphokinase; Provisional


Pssm-ID: 234868 [Multi-domain]  Cd Length: 285  Bit Score: 115.78  E-value: 9.47e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   6 KLLTGNSNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSiSSPANDNLMEMLLCIDALKRSSAKN 85
Cdd:PRK00934   1 MIIGGSASQLLASEVARLLNTELALVETKRFPDGELYVRILGEIDGEDVVIIST-TYPQDENLVELLLLIDALRDEGAKS 79

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 141043549  86 ITAVIPYFGYARQDRKVVPRTSISAKLVSNLITKAGRR 123
Cdd:PRK00934  80 ITLVIPYLGYARQDKRFKPGEPISARAIAKIISAYYDR 117
PRK07199 PRK07199
ribose-phosphate diphosphokinase;
12-118 4.07e-12

ribose-phosphate diphosphokinase;


Pssm-ID: 235960 [Multi-domain]  Cd Length: 301  Bit Score: 61.11  E-value: 4.07e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549  12 SNKKLSEKIAKYLKESLVNSSIRKFKDGEIYIEINENIRGNNIFIIQSISSPaNDNLMEMLLCIDALKRSSAKNITAVIP 91
Cdd:PRK07199  10 GNEAAAGRLAAALGVEVGRIELHRFPDGESYVRLDSPVAGRTVVLVCSLDRP-DEKLLPLLFAAEAARELGARRVGLVAP 88

                         90       100
                 ....*....|....*....|....*..
gi 141043549  92 YFGYARQDRKVVPRTSISAKLVSNLIT 118
Cdd:PRK07199  89 YLAYMRQDIAFHPGEAISQRHFARLLS 115
PRK06827 PRK06827
phosphoribosylpyrophosphate synthetase; Provisional
 3-101 5.87e-09

phosphoribosylpyrophosphate synthetase; Provisional


Pssm-ID: 180714 [Multi-domain]  Cd Length: 382  Bit Score: 52.26  E-value: 5.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549   3 KIMKLLTGNSNKKLSEKIAK-----YLKES-LVNSSIRKFKDGEIYIEINENIRGNNIFIIQSIS--------------- 61
Cdd:PRK06827  23 KVDEHLVRIRERKENENIESlafkgYSRESyLIPAKFIRFSNGEAKGEILESVRGKDIYILQDVGnysvtynmfgeknhm 102

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 141043549  62 SPaNDNLMEMLLCIDALkRSSAKNITAVIPYFGYARQDRK 101
Cdd:PRK06827 103 SP-DDHFQDLKRTIDAI-RGKARRITVIMPFLYESRQHKR 140
PLN02297 PLN02297
ribose-phosphate pyrophosphokinase
 14-93 3.58e-04

ribose-phosphate pyrophosphokinase


Pssm-ID: 177934 [Multi-domain]  Cd Length: 326  Bit Score: 38.52  E-value: 3.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141043549  14 KKLSEKIAKYlKESLVNSSI--RKFKDGEIYIEIN--ENIRGNNIFIIQSISSPanDNLMEMLLCIDALKRSSAKNITAV 89
Cdd:PLN02297  26 EELARKIAAE-SDAIELGSInwRKFPDGFPNLFINnaHGIRGQHVAFLASFSSP--AVIFEQLSVIYALPKLFVASFTLV 102


                 ....
gi 141043549  90 IPYF 93
Cdd:PLN02297 103 LPFF 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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