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Conserved domains on  [gi|148666511|gb|EDK98927|]
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RIKEN cDNA 1700011F03, isoform CRA_a [Mus musculus]

Protein Classification

TSC21 domain-containing protein( domain architecture ID 10633583)

TSC21 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TSC21 pfam15217
TSC21 family; This family of proteins is testis-specific.
11-180 1.10e-119

TSC21 family; This family of proteins is testis-specific.


:

Pssm-ID: 464568  Cd Length: 170  Bit Score: 335.14  E-value: 1.10e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   11 HVDLDIYQSSYMVDYKPFGKYKYSRVTPQEQAKLDAQLQSKEFYQPKPNPNPKLEEGYPAFRRPYMTALDLGVPGFFPPQ 90
Cdd:pfam15217   1 PVDLDIYQSSYMVDYKPYGKHKYSRVTPQEQAKLDTQLRNKEFYRPIPSPNPKLEDGYPAFKRPHMTAKDLGLPGFFPPQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   91 ERVTTRKDDGRFTTTCHYAYPASLALYLAQQDPYWLHQRADFPCLMEPERQPAPEVGKGYLLLPGCLCDHHQRVKVPILN 170
Cdd:pfam15217  81 DRVATAEDECRFTSICPSVYPASHALYLAQGDPNQLHQSADFPCLLEPERQPAAEEGKGYLLLPGCLCPHHQTVKVPILN 160
                         170
                  ....*....|
gi 148666511  171 RWGPLMPFYQ 180
Cdd:pfam15217 161 RWGPLMPFYQ 170
 
Name Accession Description Interval E-value
TSC21 pfam15217
TSC21 family; This family of proteins is testis-specific.
11-180 1.10e-119

TSC21 family; This family of proteins is testis-specific.


Pssm-ID: 464568  Cd Length: 170  Bit Score: 335.14  E-value: 1.10e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   11 HVDLDIYQSSYMVDYKPFGKYKYSRVTPQEQAKLDAQLQSKEFYQPKPNPNPKLEEGYPAFRRPYMTALDLGVPGFFPPQ 90
Cdd:pfam15217   1 PVDLDIYQSSYMVDYKPYGKHKYSRVTPQEQAKLDTQLRNKEFYRPIPSPNPKLEDGYPAFKRPHMTAKDLGLPGFFPPQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   91 ERVTTRKDDGRFTTTCHYAYPASLALYLAQQDPYWLHQRADFPCLMEPERQPAPEVGKGYLLLPGCLCDHHQRVKVPILN 170
Cdd:pfam15217  81 DRVATAEDECRFTSICPSVYPASHALYLAQGDPNQLHQSADFPCLLEPERQPAAEEGKGYLLLPGCLCPHHQTVKVPILN 160
                         170
                  ....*....|
gi 148666511  171 RWGPLMPFYQ 180
Cdd:pfam15217 161 RWGPLMPFYQ 170
 
Name Accession Description Interval E-value
TSC21 pfam15217
TSC21 family; This family of proteins is testis-specific.
11-180 1.10e-119

TSC21 family; This family of proteins is testis-specific.


Pssm-ID: 464568  Cd Length: 170  Bit Score: 335.14  E-value: 1.10e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   11 HVDLDIYQSSYMVDYKPFGKYKYSRVTPQEQAKLDAQLQSKEFYQPKPNPNPKLEEGYPAFRRPYMTALDLGVPGFFPPQ 90
Cdd:pfam15217   1 PVDLDIYQSSYMVDYKPYGKHKYSRVTPQEQAKLDTQLRNKEFYRPIPSPNPKLEDGYPAFKRPHMTAKDLGLPGFFPPQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148666511   91 ERVTTRKDDGRFTTTCHYAYPASLALYLAQQDPYWLHQRADFPCLMEPERQPAPEVGKGYLLLPGCLCDHHQRVKVPILN 170
Cdd:pfam15217  81 DRVATAEDECRFTSICPSVYPASHALYLAQGDPNQLHQSADFPCLLEPERQPAAEEGKGYLLLPGCLCPHHQTVKVPILN 160
                         170
                  ....*....|
gi 148666511  171 RWGPLMPFYQ 180
Cdd:pfam15217 161 RWGPLMPFYQ 170
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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