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Conserved domains on  [gi|149037906|gb|EDL92266|]
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DnaJ (Hsp40) homolog, subfamily B, member 1 (predicted), isoform CRA_a [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-277 4.71e-55

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 184.34  E-value: 4.71e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906    4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggssg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFG--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   84 gangtsfsytfhgdpHAMFAEFFGGRNPFDTFFGQRNGEegmDIDDPFSSFpMGMGGFTNMNfGRSRPtqeptRKKQDpp 163
Cdd:TIGR02349  66 ---------------HAGFNGGGGGGGGGFNGFDIGFFG---DFGDIFGDF-FGGGGGSGRR-RRSGP-----RRGED-- 118

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  164 VTHDLRVSLEEIYSGCTKKMKISHK-----------------------------------------------RLNPDGKS 196
Cdd:TIGR02349 119 LRYDLELTFEEAVFGVEKEIEIPRKescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcpTCGGEGKI 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  197 IRN------------EDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:TIGR02349 199 IKEpcstckgkgrvkERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFT 278

                         330
                  ....*....|....
gi 149037906  264 EALCGCTVNVPTLD 277
Cdd:TIGR02349 279 QAILGGEIEVPTLD 292
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-277 4.71e-55

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 184.34  E-value: 4.71e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906    4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggssg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFG--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   84 gangtsfsytfhgdpHAMFAEFFGGRNPFDTFFGQRNGEegmDIDDPFSSFpMGMGGFTNMNfGRSRPtqeptRKKQDpp 163
Cdd:TIGR02349  66 ---------------HAGFNGGGGGGGGGFNGFDIGFFG---DFGDIFGDF-FGGGGGSGRR-RRSGP-----RRGED-- 118

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  164 VTHDLRVSLEEIYSGCTKKMKISHK-----------------------------------------------RLNPDGKS 196
Cdd:TIGR02349 119 LRYDLELTFEEAVFGVEKEIEIPRKescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcpTCGGEGKI 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  197 IRN------------EDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:TIGR02349 199 IKEpcstckgkgrvkERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFT 278

                         330
                  ....*....|....
gi 149037906  264 EALCGCTVNVPTLD 277
Cdd:TIGR02349 279 QAILGGEIEVPTLD 292
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-277 2.85e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 156.46  E-value: 2.85e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggp 77
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRN--PGdkeAEEKFKEIKEAYEVLSDPQKRAAYDQYG--------- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  78 sggssggangtsfsytfhgdpHAMF-----AEFFGGRNPFDTFFGqrngeegmDIddpFSSFpmgMGGftnmnfGRSRPT 152
Cdd:PRK10767  71 ---------------------HAAFeqgggGGGFGGGGGFGDIFG--------DI---FGDI---FGG------GRGGGR 109

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 153 QEPTRkKQDppVTHDLRVSLEEIYSGCTKKMKISHK---------------------------------------RLNPD 193
Cdd:PRK10767 110 QRARR-GAD--LRYNMEITLEEAVRGVTKEIRIPTLvtcdtchgsgakpgtspktcptchgagqvrmqqgfftvqQTCPT 186

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 ----GKSIRN------------EDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIY 256
Cdd:PRK10767 187 chgrGKIIKDpckkchgqgrveKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAgDLYVQIHVKEHPIFERDGNDLYC 266

                        330       340
                 ....*....|....*....|.
gi 149037906 257 PARISLREALCGCTVNVPTLD 277
Cdd:PRK10767 267 EVPISFTTAALGGEIEVPTLD 287
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 162-278 2.50e-38

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 134.47  E-value: 2.50e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 162 PPVTHDLRVSLEEIYSGCTKKMKISHKRLnpdgksIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLK 240
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPgDLYVVIR 74

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 149037906 241 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDK 278
Cdd:cd10747   75 VKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGG 112
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-70 4.83e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 125.59  E-value: 4.83e-35
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHA 68
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 4-65 1.42e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.43  E-value: 1.42e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149037906    4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRKREIFD 65
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-131 8.33e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 121.85  E-value: 8.33e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPsggss 82
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG----- 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGM-DIDDPF 131
Cdd:NF037946  80 -----------FGFDAFDVFSSFFETINKSGAFLDDSVDESVSaDDDLDR 118
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 9.91e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 100.77  E-value: 9.91e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906     3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK--EPGAEEKFKEIAEAYDVLSDPRK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-277 4.71e-55

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 184.34  E-value: 4.71e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906    4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggssg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFG--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   84 gangtsfsytfhgdpHAMFAEFFGGRNPFDTFFGQRNGEegmDIDDPFSSFpMGMGGFTNMNfGRSRPtqeptRKKQDpp 163
Cdd:TIGR02349  66 ---------------HAGFNGGGGGGGGGFNGFDIGFFG---DFGDIFGDF-FGGGGGSGRR-RRSGP-----RRGED-- 118

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  164 VTHDLRVSLEEIYSGCTKKMKISHK-----------------------------------------------RLNPDGKS 196
Cdd:TIGR02349 119 LRYDLELTFEEAVFGVEKEIEIPRKescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcpTCGGEGKI 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  197 IRN------------EDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:TIGR02349 199 IKEpcstckgkgrvkERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFT 278

                         330
                  ....*....|....
gi 149037906  264 EALCGCTVNVPTLD 277
Cdd:TIGR02349 279 QAILGGEIEVPTLD 292
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-277 2.85e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 156.46  E-value: 2.85e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggp 77
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRN--PGdkeAEEKFKEIKEAYEVLSDPQKRAAYDQYG--------- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  78 sggssggangtsfsytfhgdpHAMF-----AEFFGGRNPFDTFFGqrngeegmDIddpFSSFpmgMGGftnmnfGRSRPT 152
Cdd:PRK10767  71 ---------------------HAAFeqgggGGGFGGGGGFGDIFG--------DI---FGDI---FGG------GRGGGR 109

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 153 QEPTRkKQDppVTHDLRVSLEEIYSGCTKKMKISHK---------------------------------------RLNPD 193
Cdd:PRK10767 110 QRARR-GAD--LRYNMEITLEEAVRGVTKEIRIPTLvtcdtchgsgakpgtspktcptchgagqvrmqqgfftvqQTCPT 186

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 ----GKSIRN------------EDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIY 256
Cdd:PRK10767 187 chgrGKIIKDpckkchgqgrveKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAgDLYVQIHVKEHPIFERDGNDLYC 266

                        330       340
                 ....*....|....*....|.
gi 149037906 257 PARISLREALCGCTVNVPTLD 277
Cdd:PRK10767 267 EVPISFTTAALGGEIEVPTLD 287
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-277 1.45e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 150.09  E-value: 1.45e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEglkggGPSGGSS 82
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT-----AASAGWQ 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 GGANGTSFSYTFHGDPHAMFAEFfggrnpFDTFFGQRNgeegmdiddpfssfpmGMGGFTNMNFGRSRptqePTRKKQDp 162
Cdd:PRK14299  79 GPPPGPPGGGDFSGFNVGDFSDF------FQQLFGGRG----------------GFGGFGDLFGSVGR----RARKGRD- 131

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 163 pVTHDLRVSLEEIYSGCTKKMKISHKRlnpdgksirnedkiLTIEVKRGWKEGTKITFPKEGDQTsnnipADIVFVLKDK 242
Cdd:PRK14299 132 -LEAELPLTLEEAYRGGEKVVEVAGER--------------LSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLL 191

                        250       260       270
                 ....*....|....*....|....*....|....*
gi 149037906 243 PHNIFKRDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14299 192 PHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLD 226
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-279 2.78e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 151.52  E-value: 2.78e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggss 82
Cdd:PRK14283   5 RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFG-------------- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytfhgdpHAmfaeffgGRNPF--DTFFGQRNGEegmdidDPFSSFPMGMGGFTNMnFGRSRPTQEPTRKKQ 160
Cdd:PRK14283  71 ----------------HA-------GMDGFsqEDIFNNINFE------DIFQGFGFGIGNIFDM-FGFGGGSRHGPQRGA 120

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 161 DppVTHDLRVSLEEIYSGCTKKMKISHKRLNP------------------------------------------------ 192
Cdd:PRK14283 121 D--IYTEVEITLEEAASGVEKDIKVRHTKKCPvcngsraepgsevktcptcggtgqvkqvrntilgqmmnvttcpdcqge 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 193 -----------DGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQ-TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARI 260
Cdd:PRK14283 199 gkivekpcsncHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMgDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPI 278

                        330
                 ....*....|....*....
gi 149037906 261 SLREALCGCTVNVPTLDKA 279
Cdd:PRK14283 279 SFVQAALGDTVDVPTIDGP 297
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-277 4.81e-42

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 151.90  E-value: 4.81e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPgaeEKFKEIAEAYDVLSDPRKREIFDRYGEEglkgggpsggss 82
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIYDEYGEE------------ 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytfhgdphamfaeffggrnpfdtffGQRNGEEGMDIDDPFSSFpmgmggftnmnFGRSRptqEPTRKKQDP 162
Cdd:PTZ00037  93 ----------------------------------GLEGGEQPADASDLFDLI-----------FGGGR---KPGGKKRGE 124

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 163 PVTHDLRVSLEEIYSGCTKKMKI--------------------------------------------------------- 185
Cdd:PTZ00037 125 DIVSHLKVTLEQIYNGAMRKLAInkdvicanceghggpkdafvdcklcngqgirvqirqmgsmihqtqstcnscngqgki 204

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 186 ---SHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISL 262
Cdd:PTZ00037 205 ipeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISL 284

                        330
                 ....*....|....*
gi 149037906 263 REALCGCTVNVPTLD 277
Cdd:PTZ00037 285 YEALTGFVFYITHLD 299
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 1-277 1.18e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 147.22  E-value: 1.18e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsgg 80
Cdd:PRK14291   1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFG------------ 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 ssggangtsfsytfhgdpHAMFAEFFGGRNPFDTFfgqrNGEEGMDIDDPFSSFPMGMgGFTNMnFGRSRPTQEPTRKKQ 160
Cdd:PRK14291  69 ------------------HAAFSGSGQQQQGQEGF----SDFGGGNIEDILEDVFDIF-GFGDI-FGRRRATRERRKTYQ 124

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 161 DPPVTHDL----RVSLEEIYSGCTKKMKI-----------------SHKRLNP--------------------------- 192
Cdd:PRK14291 125 RPVKGEDIyqtvEISLEEAYTGTTVSLEVpryvpceacggtgydpgSGEKVCPtcggsgeiyqrggffrisqtcptcgge 204

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 193 ----------DGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSN-NIPADIVFVLKDKPHNIFKRDGSDVIYPARIS 261
Cdd:PRK14291 205 gvlrepcskcNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFgGPPGDLYIIVKVKPHPLFERRGDNLYLDVNIT 284

                        330
                 ....*....|....*.
gi 149037906 262 LREALCGCTVNVPTLD 277
Cdd:PRK14291 285 VAEAVLGTELEVPLLD 300
PRK14289 PRK14289
molecular chaperone DnaJ;
3-277 1.56e-40

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 146.90  E-value: 1.56e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsg 79
Cdd:PRK14289   5 RDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKN--PGdkeAEEKFKEAAEAYDVLSDPDKRSRYDQFG----------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  80 gssggangtsfsytfhgdpHAMFAEFFGGRNpfdtfFGQrngeEGMDIDDPFSSF-------PMGMGGFTNMNFGRSRpt 152
Cdd:PRK14289  72 -------------------HAGVGGAAGGGG-----FSG----EGMSMEDIFSMFgdifgghGGGFGGFGGFGGGGSQ-- 121

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 153 qepTRKKQDPpvthDLRV----SLEEIYSGCTKKMKI------SHKR--------------------------------- 189
Cdd:PRK14289 122 ---QRVFRGS----DLRVkvklNLKEISTGVEKKFKVkkyvpcSHCHgtgaegnngsetcptckgsgsvtrvqntilgtm 194

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 190 --------LNPDGKSIRNE------------DKILTIEVKRGWKEGTKITFPKEGDQTSNN-IPADIVFVLKDKPHNIFK 248
Cdd:PRK14289 195 qtqstcptCNGEGKIIKKKckkcggegivygEEVITVKIPAGVAEGMQLSMNGKGNAGKHGgVNGDLLVVIEEEPHPELI 274

                        330       340
                 ....*....|....*....|....*....
gi 149037906 249 RDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14289 275 RDENDLIYNLLLSVPTAALGGAVEVPTID 303
PRK14293 PRK14293
molecular chaperone DnaJ;
1-277 2.48e-39

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 143.59  E-value: 2.48e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSgg 80
Cdd:PRK14293   1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF-- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 ssggangtsfsytfhGDPHAM--FAEFfggrnpFDTFfgqrngeegmdiddpFSSFpMGMGGftnmnFGRSRPTQEPTRK 158
Cdd:PRK14293  79 ---------------PDMGDMggFADI------FETF---------------FSGF-GGAGG-----QGGRRRRRGPQRG 116

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 159 KQdppVTHDLRVSLEEIYSGCTKKMKISH--------------------------------------------------- 187
Cdd:PRK14293 117 DD---LRYDLKLDFREAIFGGEKEIRIPHletcetcrgsgakpgtgpttcstcggagqvrratrtpfgsftqvsecptcn 193

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 188 --------KRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPA 258
Cdd:PRK14293 194 gtgqviedPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPgDLYVYLFVKNDPEFRRDGINILSEI 273

                        330
                 ....*....|....*....
gi 149037906 259 RISLREALCGCTVNVPTLD 277
Cdd:PRK14293 274 KISYLQAILGDTLEVDTVD 292
PRK14280 PRK14280
molecular chaperone DnaJ;
1-276 4.43e-39

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 142.94  E-value: 4.43e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGK-DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsg 79
Cdd:PRK14280   1 MAKrDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFG----------- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  80 gssggangtsfsytfHGDPHAMFAEFFGGRNPFDTFFGqrngeegmdIDDPFSSFpmgmggftnmnFGRSRPTQEPTRKK 159
Cdd:PRK14280  70 ---------------HAGPNQGFGGGGFGGGDFGGGFG---------FEDIFSSF-----------FGGGGRRRDPNAPR 114

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 160 QDPPVTHDLRVSLEEIYSG------------C-----------TKKMKISH--------------------KRLNPD--- 193
Cdd:PRK14280 115 QGADLQYTMTLTFEEAVFGkekeieipkeetCdtchgsgakpgTSKETCSHcggsgqvsveqntpfgrvvnRQTCPHcng 194

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 -GKSIRN----------EDKILTIEVK--RGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPAR 259
Cdd:PRK14280 195 tGQEIKEkcptchgkgkVRKRKKINVKipAGVDNGQQIRVSGEGEPGVNGGPAgDLYVVFRVRPHEFFERDGDDIYCEMP 274

                        330
                 ....*....|....*..
gi 149037906 260 ISLREALCGCTVNVPTL 276
Cdd:PRK14280 275 LTFAQAALGDEIEVPTL 291
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 162-278 2.50e-38

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 134.47  E-value: 2.50e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 162 PPVTHDLRVSLEEIYSGCTKKMKISHKRLnpdgksIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLK 240
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPgDLYVVIR 74

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 149037906 241 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDK 278
Cdd:cd10747   75 VKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGG 112
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-276 3.05e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 140.75  E-value: 3.05e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEeglkgggpSGGSS 82
Cdd:PRK14298   5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGH--------AGIDN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 GGANGTSFSYTFHGDPHAMFAEFFGGrnpfdtffGQRNGEEG--------MDIDDPFSSFPMGMGgfTNMNFGRS----- 149
Cdd:PRK14298  77 QYSAEDIFRGADFGGFGDIFEMFFGG--------GGRRGRMGprrgsdlrYDLYITLEEAAFGVR--KDIDVPRAercst 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 150 ------RPTQEPTR------KKQdppVTHDLRVSLEEIYSgcTKKMKISHKR----------LNPDGKsIRNEDKIlTIE 207
Cdd:PRK14298 147 csgtgaKPGTSPKRcptcggTGQ---VTTTRSTPLGQFVT--TTTCSTCHGRgqviespcpvCSGTGK-VRKTRKI-TVN 219

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 208 VKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL 276
Cdd:PRK14298 220 VPAGADSGLRLKLSGEGEAGSPGAPSgDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL 289
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-275 4.76e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 137.53  E-value: 4.76e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggss 82
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYG-------------- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytfHGDPHAMFAEFFGGRNPFDTFFGqrngeeGMDIDDPFSSFpmgmggftnmnFGRSRPTQEPTRKKQDP 162
Cdd:PRK14276  70 ------------AAGANGGFGGGAGGFGGFDGSGG------FGGFEDIFSSF-----------FGGGGARRNPNAPRQGD 120

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 163 PVTHDLRVSLEEIYSGctKKMKISHKR-----------------------------LNPD-------------------- 193
Cdd:PRK14276 121 DLQYRVNLDFEEAIFG--KEKEVSYNReatchtcngsgakpgtspvtcgkchgsgvITVDtqtplgmmrrqvtcdvchgt 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 GKSIRN----------EDKILTIEVK--RGWKEGTKITFPKEGDQTSNNIP-ADIVFVLKDKPHNIFKRDGSDVIYPARI 260
Cdd:PRK14276 199 GKEIKEpcqtchgtghEKQAHTVSVKipAGVETGQQIRLQGQGEAGFNGGPyGDLYVVFRVEPSKKFERDGSTIYYTLPI 278

                        330
                 ....*....|....*
gi 149037906 261 SLREALCGCTVNVPT 275
Cdd:PRK14276 279 SFVQAALGDTVEVPT 293
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 3-277 3.06e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 132.42  E-value: 3.06e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEeglKGGGPSGGS 81
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQFGK---AGVNAGAGG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  82 SGGANGTSFSYTFhGDPHAMFAEFFGGRNPFDTFFGQRNG-EEGMDIDDPFSSfpmgmgGFTNMNFGRSRPTQEP----- 155
Cdd:PRK14286  81 FGQGAYTDFSDIF-GDFGDIFGDFFGGGRGGGSGGGRRSGpQRGSDLRYNLEV------SLEDAALGREYKIEIPrlesc 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 156 -------TRKKQDPPVTHDLR-----------VSLEEIYSGCTKKMK-ISHKRLNPDGKSIRNEDKILTIEVKRGWKEGT 216
Cdd:PRK14286 154 vdcngsgASKGSSPTTCPDCGgsgqirrtqgfFSVATTCPTCRGKGTvISNPCKTCGGQGLQEKRRTINIKIPPGVETGS 233

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149037906 217 KITFPKEGDQTSNNIP-ADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14286 234 RLKVSGEGEAGPNGGPhGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTID 295
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-70 4.83e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 125.59  E-value: 4.83e-35
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHA 68
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 4-65 1.42e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.43  E-value: 1.42e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149037906    4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRKREIFD 65
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-277 2.31e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 130.31  E-value: 2.31e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggp 77
Cdd:PRK14277   3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGdkeAEQKFKEINEAYEILSDPQKRAQYDQFG--------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  78 sggssggangtsfsytfhgdpHAMFAEFFGGRNPFDtffGQRNGEEGMDIDdpFSSFPMGMGGFTNMNFG--RSRPTQEP 155
Cdd:PRK14277  72 ---------------------HAAFDPGGFGQGGFG---QGGFGGGGFDFD--FGGFGDIFEDIFGDFFGtgRRRAETGP 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 156 tRKKQDppVTHDLRVSLEEIYSGCTKKMKISH--------------------------------KRLNPDGK--SIRN-- 199
Cdd:PRK14277 126 -QKGAD--IRYDLELTFEEAAFGTEKEIEVERfekcdvckgsgakpgskpvtcpvchgtgqvrtRQNTPFGRivNIRTcd 202

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 200 ----EDKILT-------------------IEVKRGWKEGTKITFPKEGDQTSNNIP-ADIVFVLKDKPHNIFKRDGSDVI 255
Cdd:PRK14277 203 rchgEGKIITdpcnkcggtgrirrrrkikVNIPAGIDDGQMITLRGEGEPGIKGGPnGDLYIVIKVKPHPLFKREGYNVY 282

                        330       340
                 ....*....|....*....|..
gi 149037906 256 YPARISLREALCGCTVNVPTLD 277
Cdd:PRK14277 283 LEMPITFTDAALGGEIEIPTLD 304
PRK14297 PRK14297
molecular chaperone DnaJ;
3-277 5.18e-33

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 126.82  E-value: 5.18e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglKGGGPSGGS 81
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYDQFG----TADFNGAGG 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  82 SGGANGTSFSYTFHGDPHAMFAEFFGGrnPFDTFFGQRNG-EEGMDIDDPFS-SFPMGMGGF-TNMNFGRSRPTQEPT-- 156
Cdd:PRK14297  80 FGSGGFGGFDFSDMGGFGDIFDSFFGG--GFGSSSRRRNGpQRGADIEYTINlTFEEAVFGVeKEISVTRNENCETCNgt 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 157 -RKKQDPPVTHD-------LRVSLEEIY------SGCTK---KMKISHKRLNP-DGKSIRNEDKILTIEVKRGWKEGTKI 218
Cdd:PRK14297 158 gAKPGTSPKTCDkcggtgqIRVQRNTPLgsfvstTTCDKcggSGKVIEDPCNKcHGKGKVRKNRKIKVNVPAGVDTGNVI 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 219 TFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14297 238 PLRGQGEHGKNGGPTgDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVD 297
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 4-277 8.41e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 125.77  E-value: 8.41e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSGGssg 83
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDP--- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  84 gangtsfsytFHG---DPHAMFAEFFGGRNpFDTFFGQRNGEEGMDID-----------------------------DPF 131
Cdd:PRK14292  80 ----------FGGmgfDPMDIFEQLFGGAG-FGGGRGRRGPARGDDLEtearitleqarageevevevdrltecehcHGS 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 132 SSFPMGMGGFTNMNFGRSRPTQEPTRKKQDPPVTHDL----RVSLEEIYSGCTkkmkISHKRlnpdGKSIRNEDkiLTIE 207
Cdd:PRK14292 149 RTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPcptcRGEGQIITDPCT----VCRGR----GRTLKAET--VKVK 218

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 208 VKRGWKEGTKITFPKEGDQTSNNiPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14292 219 LPRGIDEGYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLD 287
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 1-279 1.64e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 125.69  E-value: 1.64e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKN---KEpgAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggp 77
Cdd:PRK14281   1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNpdnKE--AEEHFKEVNEAYEVLSNDDKRRRYDQFG--------- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  78 sggssggangtsfsytfHGDPHAMFAEffGGRNPFdtffgqrnGEEGMDIDDPFSSFPMGMGGFTNMNFGRSRPTQE--- 154
Cdd:PRK14281  70 -----------------HAGVGSSAAS--GGGPGY--------GGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDvfg 122

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 155 --PTRKKQDPPVT-HDLRV----SLEEIYSGCTKKMKIshKRLNP----------------------------------- 192
Cdd:PRK14281 123 ggGRRRRASAGIPgTDLKIrlklTLEEIAKGVEKTLKI--KKQVPckecngtgsktgatetcptchgsgevrqasktmfg 200

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 193 -------------------------DGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQ-TSNNIPADIVFVLKDKPHNI 246
Cdd:PRK14281 201 qfvnitacptcggegrvvkdrcpacYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAgPRGGAPGDLIVVIEEKPHEL 280

                        330       340       350
                 ....*....|....*....|....*....|...
gi 149037906 247 FKRDGSDVIYPARISLREALCGCTVNVPTLDKA 279
Cdd:PRK14281 281 FVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA 313
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 164-278 1.90e-32

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 120.82  E-value: 1.90e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  164 VTHDLRVSLEEIYSGCTKKMKISHKRLNPD-------------------------------------------------- 193
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTcggsgakpgtspktcpccggggqvrrqfgffstctccpccggggkiidkc 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  194 ----GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNN-IPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 268
Cdd:pfam01556  81 ckccGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGgPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLG 160

                         170
                  ....*....|
gi 149037906  269 CTVNVPTLDK 278
Cdd:pfam01556 161 GTIEVPTLDG 170
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-277 2.88e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 124.49  E-value: 2.88e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGEEglkgggpsg 79
Cdd:PRK14294   4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRN--PGdkeAEELFKEAAEAYEVLSDPKKRGIYDQYGHE--------- 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  80 gssggangtsfsytfhGDPHAMFAEFFGgrnpfdtffgqrngeegmdIDDPFSSFPMGMGGFtnMNFGRSRPTQEPTRKK 159
Cdd:PRK14294  73 ----------------GLSGTGFSGFSG-------------------FDDIFSSFGDIFEDF--FGFGGGRRGRSRTAVR 115

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 160 QDPPVTHDLRVSLEEIYSGCTKKMKISH-------------------------------------------KRLNPDGKS 196
Cdd:PRK14294 116 AGADLRYDLTLPFLEAAFGTEKEIRIQKletceechgsgcepgtspttcpqcggsgqvtqsqgffsirttcPRCRGMGKV 195

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 197 IRN------------EDKILTIEVKRGWKEGTKITFPKEG-DQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:PRK14294 196 IVSpcktchgqgrvrVSKTVQVKIPAGVDTGSRLRLRGEGeAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFV 275

                        330
                 ....*....|....
gi 149037906 264 EALCGCTVNVPTLD 277
Cdd:PRK14294 276 QAALGAQIEVPTLE 289
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-131 8.33e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 121.85  E-value: 8.33e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPsggss 82
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG----- 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGM-DIDDPF 131
Cdd:NF037946  80 -----------FGFDAFDVFSSFFETINKSGAFLDDSVDESVSaDDDLDR 118
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 4-278 5.87e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 118.41  E-value: 5.87e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNkePG---AEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSGG 80
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKN--PGdaeAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 SSGGANGTSFSYTFHGdphAMFAEFFGGRNPFDTFFGQrNGEEgmdiddpfssfpMGMGGftnmnfgrsrptqEPTRKKQ 160
Cdd:PRK14284  80 GAGMGNMEDALRTFMG---AFGGEFGGGGSFFEGLFGG-LGEA------------FGMRG-------------GPAGARQ 130

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 161 DPPVTHDLRVSLEEIYSGCTKKMKIS-HKRLNP-DGKSIRNEDKILTIE---------VKRGW-----------KEGTKI 218
Cdd:PRK14284 131 GASKKVHITLSFEEAAKGVEKELLVSgYKSCDAcSGSGANSSQGIKVCDrckgsgqvvQSRGFfsmastcpecgGEGRVI 210

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 219 TFP----------KE-----------------------GDQTSNNIPADIVFVLKD-KPHNIFKRDGSDVIYPARISLRE 264
Cdd:PRK14284 211 TDPcsvcrgqgriKDkrsvhvhipagvdsgmrlkmegyGDAGQNGAPAGDLYVFIDvEPHPVFERRGDDLILELPIGFVD 290

                        330
                 ....*....|....
gi 149037906 265 ALCGCTVNVPTLDK 278
Cdd:PRK14284 291 AALGMKKEIPTLLK 304
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-277 1.86e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 116.69  E-value: 1.86e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDrygeeglkgggpsgg 80
Cdd:PRK14278   1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVD--------------- 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 ssggangtsfsytFHGDPHAMFAeffGGRNPFDTFFGqrngeegmDIDDPFSSFpMGMGGFTNMNFGRSRPTQEPTRKkq 160
Cdd:PRK14278  66 -------------LGGDPLESAG---GGGGGFGGGFG--------GLGDVFEAF-FGGGAASRGPRGRVRPGSDSLLR-- 118

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 161 dppvthdLRVSLEEIYSGCTKKMKI---------SHKRLNPDGKSIRNE------------------------------- 200
Cdd:PRK14278 119 -------MRLDLEECATGVTKQVTVdtavlcdrcHGKGTAGDSKPVTCDtcggrgevqtvqrsflgqvmtsrpcptcrgv 191

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 201 -------------------DKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGSDVIYPARI 260
Cdd:PRK14278 192 gevipdpchecagdgrvraRREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVeVHEQPHDVFVRDGDDLHCTVSV 271

                        330
                 ....*....|....*..
gi 149037906 261 SLREALCGCTVNVPTLD 277
Cdd:PRK14278 272 PMVDAALGTTVTVEAIL 288
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-277 1.87e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 116.65  E-value: 1.87e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsggss 82
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG-------------- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytfHGDPHAMF-----AEFFGGRNPFDTFFGQRNGEEGMDIDDPFSSFPMGMG-GFTNMNFGR-------- 148
Cdd:PRK14287  70 ------------HTDPNQGFggggaGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTlEFKEAVFGKeteieipr 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 149 -----------SRPTQEPT-----------RKKQDPPVThdlRVSLEEIYSGCTKKMK-ISHKRLNPDGKSIRNEDKILT 205
Cdd:PRK14287 138 eetcgtchgsgAKPGTKPEtcshcggsgqlNVEQNTPFG---RVVNRRVCHHCEGTGKiIKQKCATCGGKGKVRKRKKIN 214

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149037906 206 IEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLD 277
Cdd:PRK14287 215 VKVPAGIDHGQQLRVSGQGEAGVNGGPPgDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLN 287
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 1-277 3.92e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 115.99  E-value: 3.92e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGeeglkgggpsg 79
Cdd:PRK14301   2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFG----------- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  80 gssggangtsfsytfhgdpHAMfaefFGGRNPFDTFfgqrngeegMDIDDPFSSFPMGMGGFTNMNFGRSRPTQEPTRKK 159
Cdd:PRK14301  71 -------------------HAG----VNGNGGFGGF---------SSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGS 118

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 160 QdppVTHDLRVSLEEIYSGCTKKMKISHKRLNPD---------------------------------------------- 193
Cdd:PRK14301 119 D---LRYNLTVSFRQAAKGDEVTLRIPKNVTCDDcggsgaapgtspetcrhcggsgqvrqsqgffqiavpcpvcrgegrv 195

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 ---------GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:PRK14301 196 ithpcpkckGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPgDLYVVITVEDDKIFQRQGQDLVVTQEISFV 275

                        330
                 ....*....|....
gi 149037906 264 EALCGCTVNVPTLD 277
Cdd:PRK14301 276 QAALGDRIEVPTLD 289
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-274 1.01e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 111.81  E-value: 1.01e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSGG 80
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEnrKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETE 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 SSGGangtsfsytFHGDPHAMFAEFFgGRNPFDTFFGQRNGEE--------GMDI----DDPFSSFPMGMGgfTNMNFGR 148
Cdd:PRK14282  84 SGGG---------FFEDIFKDFENIF-NRDIFDIFFGERRTQEeqreyarrGEDIryeiEVTLSDLINGAE--IPVEYDR 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 149 SRPTQ-------EPTRKKQDPPVTHDLRVSLEEIYS------------GCTKKMKISHKRLNPDGKS--IRNEDKIlTIE 207
Cdd:PRK14282 152 YETCPhcggtgvEPGSGYVTCPKCHGTGRIREERRSffgvfvsertceRCGGTGKIPGEYCHECGGSgrIRRRVRT-TVK 230

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149037906 208 VKRGWKEGTKITFPKEGDQTSNNIP-ADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVP 274
Cdd:PRK14282 231 IPAGVEDGTVLRITGGGNAGYYGGPyGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVP 298
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 4-62 3.29e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 102.00  E-value: 3.29e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKRE 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKgDPKAEERFKEINEAYELLSDAEKRA 60
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 1-204 3.64e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 110.41  E-value: 3.64e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPS 78
Cdd:PRK14290   1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGnkAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  79 GGSSggangtsfSYTFHGDPHAMFAEFFGGrNPFDTFFgqrngeegmdiddpfssfpmgmGGFTNmnfgrsrptqEPTRK 158
Cdd:PRK14290  81 FNWD--------NFTHFSDINDIFNQIFGG-NFGSDFF----------------------SGFGN----------QQSTR 119

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 149037906 159 KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKIL 204
Cdd:PRK14290 120 NIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKL 165
PRK10266 PRK10266
curved DNA-binding protein;
3-276 4.35e-27

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 109.14  E-value: 4.35e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEglkgggpsggss 82
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH------------ 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsytfHGDPHamfaeffggrnpFDTFFGQRNGEEG--MDIDDPFSSFpmgmggftnmnFGR--SRPTQEPTRK 158
Cdd:PRK10266  72 ------------RNDPQ------------FNRQFQHGDGQSFnaEDFDDIFSSI-----------FGQhaRQSRQRPAAR 116

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 159 KQDppVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIP-ADIVF 237
Cdd:PRK10266 117 GHD--IEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPnGDLWL 194

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 149037906 238 VLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL 276
Cdd:PRK10266 195 VIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTL 233
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 9.91e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 100.77  E-value: 9.91e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906     3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK--EPGAEEKFKEIAEAYDVLSDPRK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
PRK14279 PRK14279
molecular chaperone DnaJ;
3-278 1.43e-26

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 109.05  E-value: 1.43e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDrygeeglkgggpsggs 81
Cdd:PRK14279   9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYD---------------- 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  82 sggangtsfsytfhgDPHAMFAEFFGGRNPFDTF-----FGQRNGEEGMDIDDPF-SSFPMGMGGFTNMN---FGRSRPT 152
Cdd:PRK14279  73 ---------------ETRRLFAGGGFGGRRFDGGggfggFGTGGDGAEFNLNDLFdAAGRGGGGGIGDLFgglFNRGGGS 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 153 QEPTRKKQDPPVTHDLRVSLEEIYSGCTKKMK------------------------------------------------ 184
Cdd:PRK14279 138 ARPSRPRRGNDLETETTLDFVEAAKGVTMPLRltspapcttchgsgarpgtspkvcptcngsgvisrnqgafgfsepctd 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 185 -------ISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFV-LKDKPHNIFKRDGSDVIY 256
Cdd:PRK14279 218 crgtgsiIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVtVHVRPDKVFGRDGDDLTV 297

                        330       340
                 ....*....|....*....|..
gi 149037906 257 PARISLREALCGCTVNVPTLDK 278
Cdd:PRK14279 298 TVPVSFTELALGSTLSVPTLDG 319
PRK14295 PRK14295
molecular chaperone DnaJ;
3-277 3.97e-26

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 108.01  E-value: 3.97e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDR----YGeeglkgggp 77
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDEarslFG--------- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  78 sggssggangtsfSYTFHGDPHAMfaefFGGRNPF---DTFFGQRNGEEGMDIDDPFSSFpmgMGGFTNmnfGRSRPTQe 154
Cdd:PRK14295  80 -------------NGGFRPGPGGG----GGGGFNFdlgDLFGGGAQGGGGAGGGGGLGDV---FGGLFN---RGGRRTQ- 135

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 155 pTRKKQDppVTHDLRVSLEEIYSGCTKKMKISHK-----------------RLNPD------------------------ 193
Cdd:PRK14295 136 -PRRGAD--VESEVTLSFTEAIDGATVPLRLTSQapcpacsgtgakngttpRVCPTcsgtgqvsrnsggfslsepcpdck 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 194 GKSIRNEDKIL------------TIEVK--RGWKEGTKITFPKEGDQTSNNIPA-DIVFVLKDKPHNIFKRDGSDVIYPA 258
Cdd:PRK14295 213 GRGLIADDPCLvckgsgrakssrTMQVRipAGVSDGQRIRLRGKGAPGERGGPAgDLYVVVHVDPHPVFGRSGDNLTVTV 292

                        330
                 ....*....|....*....
gi 149037906 259 RISLREALCGCTVNVPTLD 277
Cdd:PRK14295 293 PVTFPEAALGAEVRVPTLG 311
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-57 4.35e-26

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 98.77  E-value: 4.35e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSD 57
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPdDPEAEEKFKEINEAYEVLSD 55
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 1-290 2.16e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.46  E-value: 2.16e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEglkgggpsg 79
Cdd:PRK14285   1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGnKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT--------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  80 gssggangtsfsyTFHGDphAMFAEFFGGRNPFDTFFgqrngeegMDIDDPFSSFPMGmggftnmNFGRSRPTQEptRKK 159
Cdd:PRK14285  72 -------------AFEGG--GGFEGFSGGFSGFSDIF--------EDFGDIFDSFFTG-------NRGQDKNRKH--EKG 119

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 160 QDppVTHDLRVSLEEIYSGCTKKMKISHKRL---------------------NPDGKSIR---------------NEDKI 203
Cdd:PRK14285 120 QD--LTYQIEISLEDAYLGYKNNINITRNMLcesclgkksekgtspsicnmcNGSGRVMQgggffrvtttcpkcyGNGKI 197

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 204 L-----------------TIEVK--RGWKEGTKITFPKEGDQTSNNIP-ADIVFVLKDKPHNIFKRDGSDVIYPARISLR 263
Cdd:PRK14285 198 IsnpcksckgkgslkkkeTIELKipAGIDDNQQIKMRGKGSVNPDNQQyGDLYIKILIKPHKIFKRNGKDLYATLPISFT 277

                        330       340       350
                 ....*....|....*....|....*....|
gi 149037906 264 EALCGCTVNVPTLDKASPS---PKHLRNVE 290
Cdd:PRK14285 278 QAALGKEIKIQTIASKKIKikiPKGTENDE 307
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 1-277 4.53e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 104.71  E-value: 4.53e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGGPSGG 80
Cdd:PRK14300   1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  81 SSGGAngtsfsyTFHGDPHAMFAEFFggrnpfdtffgqrngeegmdiddpfSSFpmgMGGFtnmnfGRSRPTQEPTRKKQ 160
Cdd:PRK14300  81 GGNHG-------GFHPDINDIFGDFF-------------------------SDF---MGGS-----RRSRPTSSKVRGSD 120

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 161 dppVTHDLRVSLEEIYSGCTKKMKISHK-------------------------------------------RLNPDGKSI 197
Cdd:PRK14300 121 ---LKYNLTINLEEAFHGIEKNISFSSEvkcdtchgsgsekgetvttcdacsgvgatrmqqgfftieqachKCQGNGQII 197

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 198 RN------------EDKILTIEVKRGWKEGTKITFPKEGD---QTSNNipADIVFVLKDKPHNIFKRDGSDVIYPARISL 262
Cdd:PRK14300 198 KNpckkchgmgryhKQRNLSVNIPAGVENGTRIRHTGEGEagiRGGNS--GDLYVDIAIKPHDIYKVDGANLHCKLPISF 275

                        330
                 ....*....|....*
gi 149037906 263 REALCGCTVNVPTLD 277
Cdd:PRK14300 276 VNAALGGEIEVPVIE 290
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-277 1.19e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 103.49  E-value: 1.19e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEglkgggpsggss 82
Cdd:PRK14296   4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA------------ 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906  83 ggangtsfsyTFHGDphAMFAEFFGGrnpFDTFFGQRNGEEGMDIDDPFSSFpmgmggftnmnFGRSRPTQEPTRKKQDp 162
Cdd:PRK14296  72 ----------AFDGS--SGFSSNFGD---FEDLFSNMGSSGFSSFTNIFSDF-----------FGSNKSDYQRSTKGQS- 124

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 163 pVTHDLRVSLEEIYSGCTKKM----------------------------------------------------------- 183
Cdd:PRK14296 125 -VSLDIYLTFKELLFGVDKIIeldlltncskcfgsgaesnsdihicnnchgtgevlvqknmgffqfqqsakcnvcngagk 203

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149037906 184 KISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNN-IPADIVFVLKDKPHNIFKR-DGSDVIYPARIS 261
Cdd:PRK14296 204 IIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNgVNGDLIIDIYLKESKVFEIiNNNDILMTYNIS 283

                        330
                 ....*....|....*.
gi 149037906 262 LREALCGCTVNVPTLD 277
Cdd:PRK14296 284 YLDAILGNEIIIKTLD 299
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
3-66 1.52e-23

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 93.24  E-value: 1.52e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDPRKREIFDR 66
Cdd:COG2214    5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKalAEELFQRLNEAYEVLSDPERRAEYDR 70
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-68 2.41e-22

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 98.73  E-value: 2.41e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149037906    3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68
Cdd:TIGR03835   2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYG 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
4-63 7.44e-16

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 71.75  E-value: 7.44e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149037906   4 DYYQTLGLARGASDDEIKRAYRRQALRYHPDK--NKEPG-----AEEKFKEIAEAYDVLSDPRKREI 63
Cdd:COG1076    5 DAFELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEeeqrlALQKAAAINEAYETLKDPRGIDL 71
PRK14288 PRK14288
molecular chaperone DnaJ;
1-70 3.39e-14

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 73.18  E-value: 3.39e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149037906   1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70
Cdd:PRK14288   1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71
djlA PRK09430
co-chaperone DjlA;
3-55 1.33e-09

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 58.28  E-value: 1.33e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149037906   3 KDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPG--------AEEKFKEIAEAYDVL 55
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGlppemmemAKEKAQEIQAAYELI 260
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 4-65 1.01e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.11  E-value: 1.01e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149037906   4 DYYQTLGLAR---GASDDEIKRAYRRQALRYHPDKNKEPGA---EEKFKEIAEAYDVLSDPRKREIFD 65
Cdd:COG5269   44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNkgcDEFFKLIQKAREVLGDRKLRLQYD 111
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 5-68 1.59e-07

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 53.25  E-value: 1.59e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 149037906    5 YYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYG 68
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFG 638
PHA03102 PHA03102
Small T antigen; Reviewed
 7-57 1.16e-05

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 45.05  E-value: 1.16e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 149037906   7 QTLGLARGASDDE--IKRAYRRQALRYHPDKNkepGAEEKFKEIAEAYDVLSD 57
Cdd:PHA03102   9 DLLGLPRSAWGNLplMRKAYLRKCLEFHPDKG---GDEEKMKELNTLYKKFRE 58
PHA02624 PHA02624
large T antigen; Provisional
 9-57 3.89e-04

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 42.28  E-value: 3.89e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 149037906   9 LGLARGASDDE--IKRAYRRQALRYHPDKNkepGAEEKFKEIAEAYDVLSD 57
Cdd:PHA02624  17 LGLPMAAWGNLplMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQE 64
hscB PRK01356
co-chaperone HscB; Provisional
 4-61 3.51e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 37.93  E-value: 3.51e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 149037906   4 DYYQTLGLARGASDD--EIKRAYRRQALRYHPDKNKEPGAEEKFKEIA----EAYDVLSDPRKR 61
Cdd:PRK01356   3 NYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDKAKTLQEKEQNLIIAselnNAYSTLKDALKR 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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