|
Name |
Accession |
Description |
Interval |
E-value |
| Rabaptin |
pfam03528 |
Rabaptin; |
11-452 |
0e+00 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 696.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 11 DEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFH 90
Cdd:pfam03528 46 EEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKAVATVSENTKQEAIDEVKSQWQEEVASLQAIMKETVREYEVQFH 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 91 LRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 170
Cdd:pfam03528 126 RRLEQERAQWNQYRESAEREIADLRRRLSEGQEEENLEDEMKKAQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELE 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 171 ASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRL 250
Cdd:pfam03528 206 ASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 251 LMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCALTQEESSTPLSNEEEHLDSTHG 330
Cdd:pfam03528 286 LMRDMQRMESVLTSEQLRQVEEIKKKDQEEHKRARTHKEKETLKSDREHTVSIHAVFSPAGVETSAPLSNVEEQINSAHG 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 331 SVHSLDADLLLPSGDPFSKSDnDMFKEGLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFD 410
Cdd:pfam03528 366 SVHSLDTDVVLGAGDSFNKQE-DPFKEGLRRAQSTDSLGSSSSLQHKFLGHNQKAKSAGNLDESDFGPLVGADSVSENFD 444
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 149053243 411 TVSLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQ 452
Cdd:pfam03528 445 TSSLGSLKMPSGFMLTKDQEKAIKAMTPEQEETASLLSSVTQ 486
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
490-796 |
2.56e-123 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 373.15 E-value: 2.56e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 490 CDMCSNYEKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEE 569
Cdd:pfam09311 1 CDMCSNYEKQLQAIQEQEAETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSETLLDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 570 LQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVR 649
Cdd:pfam09311 81 LQQAFSQAKRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGKHSLHVSLQQAEKFDMPDTVQELQELVLKYREELIEVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 650 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 729
Cdd:pfam09311 161 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRQLEDL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149053243 730 QEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 796
Cdd:pfam09311 241 QTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 307
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
91-795 |
1.60e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.71 E-value: 1.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 91 LRLEQERAQWAQYRESADREIadlrrrlsegQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 170
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAE----------EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 171 ASKV-------------KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 237
Cdd:TIGR02168 302 QQKQilrerlanlerqlEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 238 QKAND---QFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCAL----T 310
Cdd:TIGR02168 382 ETLRSkvaQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELerleE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 311 QEESSTPLSNE-EEHLDSTHGSVHSLDADL-----LLPSGDPFSKSDNDMFKEGLRRAQSTDSLGTSSSLQSK------- 377
Cdd:TIGR02168 462 ALEELREELEEaEQALDAAERELAQLQARLdslerLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaaiea 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 378 ALGYNY---------KAKSAGN-LDESDFGPLV--GADSVSENFDTVSLG-SLQMPSGFMLTKDqeRAIKAMTPEQEETA 444
Cdd:TIGR02168 542 ALGGRLqavvvenlnAAKKAIAfLKQNELGRVTflPLDSIKGTEIQGNDReILKNIEGFLGVAK--DLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 445 SLLS------SVTQGMESAYVSPSGYLLVSE------TEWNLLQKEVHNAGNKLGRRCDMcSNYEKQLQGIQIQEAETRD 512
Cdd:TIGR02168 620 YLLGgvlvvdDLDNALELAKKLRPGYRIVTLdgdlvrPGGVITGGSAKTNSSILERRREI-EELEEKIEELEEKIAELEK 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 513 QVKKLQLMLRQANDQLEKTMKEKQELEDFLR-------------QSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKR 579
Cdd:TIGR02168 699 ALAELRKELEELEEELEQLRKELEELSRQISalrkdlarleaevEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA 778
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 580 DVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhvslqlaedfiLPDTVQVLRELVLKYRENIVHVRTAADHME--- 656
Cdd:TIGR02168 779 EAEAEIEELEAQIEQLKEELKALREALDELRAELTL-----------LNEEAANLRERLESLERRIAATERRLEDLEeqi 847
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 657 EKLKAEILFLKEQIQAEQCLKENLEETLqleiencKEEIASISSLKAELERIKVEKGQLESTLREKSQQlesLQEIKVNL 736
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESEL-------EALLNERASLEEALALLRSELEELSEELRELESK---RSELRREL 917
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149053243 737 EEQLKKETAAKATVEQLMFEEKNKAQRL----QTELDVSEQVQRDFVKLSQTLQVQLERIRQA 795
Cdd:TIGR02168 918 EELREKLAQLELRLEGLEVRIDNLQERLseeySLTLEEAEALENKIEDDEEEARRRLKRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
11-781 |
1.16e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 11 DEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEA----------IDEVKRQWREEVASLQAVMKE 80
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELqkelyalaneISRLEQQKQILRERLANLERQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 81 TVRDYEHQFHL-----RLEQERAQWAQYRESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAA 154
Cdd:TIGR02168 318 LEELEAQLEELeskldELAEELAELEEKLEELKEELESLEAELEELEAElEELESRLEELEEQLETLRSKVAQLELQIAS 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 155 LKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLK 234
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 235 HTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRInkgKDNKKIDTEEEVKIPVVC-----AL 309
Cdd:TIGR02168 475 QALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVL---SELISVDEGYEAAIEAALggrlqAV 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 310 TQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDNDMFKEGLrrAQSTDSLGTSSSLQSKALGY-------- 381
Cdd:TIGR02168 551 VVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF--LGVAKDLVKFDPKLRKALSYllggvlvv 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 382 --------NYKAKSAGNLDESDFGPLVGADSV----SENFDTVSLG--------SLQMPSGFMLTKDQERAIKAMTPEQE 441
Cdd:TIGR02168 629 ddldnaleLAKKLRPGYRIVTLDGDLVRPGGVitggSAKTNSSILErrreieelEEKIEELEEKIAELEKALAELRKELE 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 442 ETASLLSSVTQGMESAYVSPSGY---LLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQ 518
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALrkdLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 519 LMLRQANDQLEKTMKEKQELEDFLRQSAEDsshqISALVLRAQASEVLLEELQQSF---SQAKRDVQEQMAVLMQSREQV 595
Cdd:TIGR02168 789 AQIEQLKEELKALREALDELRAELTLLNEE----AANLRERLESLERRIAATERRLedlEEQIEELSEDIESLAAEIEEL 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 596 SEELVRLQKDNDSLQ---GKHSLHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHME---EKLKAEILFLKEQ 669
Cdd:TIGR02168 865 EELIEELESELEALLnerASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLElrlEGLEVRIDNLQER 944
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 670 IQAEQCLKENLEETLQLEIEnckeeiASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKAT 749
Cdd:TIGR02168 945 LSEEYSLTLEEAEALENKIE------DDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKET 1018
|
810 820 830
....*....|....*....|....*....|..
gi 149053243 750 VEQLMfEEKNKAQRLQTeLDVSEQVQRDFVKL 781
Cdd:TIGR02168 1019 LEEAI-EEIDREARERF-KDTFDQVNENFQRV 1048
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
497-809 |
3.61e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 3.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 497 EKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEkTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQ 576
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELE-ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 577 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHslhvslqlaedfilpDTVQVLRELVLKYRENIVHVRTAADHME 656
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEEL---------------EEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 657 EKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNL 736
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149053243 737 EEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTK 809
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA 534
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
497-803 |
1.95e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 497 EKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSH---QISALVLRAQASEVLLEELQQS 573
Cdd:COG1196 210 EKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAEleaELEELRLELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 574 FSQAKRDV---QEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHvslqlaedfilpdtvqvlrelvlkyRENIVHVRT 650
Cdd:COG1196 290 EYELLAELarlEQDIARLEERRRELEERLEELEEELAELEEELEEL-------------------------EEELEELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 651 AADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQ 730
Cdd:COG1196 345 ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELE 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149053243 731 EIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRA 803
Cdd:COG1196 425 ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
508-797 |
3.45e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.30 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 508 AETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRdVQEQMAV 587
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-ELEKLTE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 588 LMQSREQVSEELVRLQK----------DNDSLQGK---HSLHVSLQLAEDFI--LPDTVQVLRELVLKYRENIVHVRTAA 652
Cdd:TIGR02169 259 EISELEKRLEEIEQLLEelnkkikdlgEEEQLRVKekiGELEAEIASLERSIaeKERELEDAEERLAKLEAEIDKLLAEI 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 653 DHMEEKLKAEILfLKEQIQAEQCLKENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLREKSQQLES 728
Cdd:TIGR02169 339 EELEREIEEERK-RRDKLTEEYAELKEELEDLRAELEEVDKEFAEtrdeLKDYREKLEKLKREINELKRELDRLQEELQR 417
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149053243 729 LQEIKVNLEEQLK----KETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 797
Cdd:TIGR02169 418 LSEELADLNAAIAgieaKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
92-286 |
1.02e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 92 RLEQERAQWAQYRESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 170
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 171 ASKVKELNHYLEAEKScrtdlemyVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRL 250
Cdd:COG1196 323 EELAELEEELEELEEE--------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190
....*....|....*....|....*....|....*.
gi 149053243 251 LMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRI 286
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
508-749 |
8.62e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 8.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 508 AETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAV 587
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 588 LMQSREQVSEELVRLQKdndslQGKHSLHVSLQLAEDFilpdtVQVLRELVLkYRENIVHVRTAADHMEEKLkAEILFLK 667
Cdd:COG4942 99 LEAQKEELAELLRALYR-----LGRQPPLALLLSPEDF-----LDAVRRLQY-LKYLAPARREQAEELRADL-AELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 668 EQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERikvEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAK 747
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEK---ELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
..
gi 149053243 748 AT 749
Cdd:COG4942 244 PA 245
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
55-300 |
2.10e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.39 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 55 TKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQwAQYRESADREIADLRRRLSEGQEEENLENEMKKA 134
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQ-AEEYELLAELARLEQDIARLEERRRELEERLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 135 QEDAEKLrsvvmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRK 214
Cdd:COG1196 322 EEELAEL-------EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 215 ELHEVCHLLEQERQQHNQlkhtwQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKK 294
Cdd:COG1196 395 AAELAAQLEELEEAEEAL-----LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL 469
|
....*.
gi 149053243 295 IDTEEE 300
Cdd:COG1196 470 EEAALL 475
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
508-741 |
2.34e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 508 AETRDQVKKLQLMLRQANDQLEKTMKEKQELE---DFLRQSAEDSSHQISALVLRAQasevLLEELQQSFSQAKRDVQEQ 584
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIEnrlDELSQELSDASRKIGEIEKEIE----QLEQEEEKLKERLEELEED 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 585 MAVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKA-- 661
Cdd:TIGR02169 746 LSSLEQEIENVKSELKELEARIEELEEDlHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRlt 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 662 ---------------EILFLKEQIQAEQCLKENLE---ETLQLEIENCKEEI-----------ASISSLKAELERIKVEK 712
Cdd:TIGR02169 826 lekeylekeiqelqeQRIDLKEQIKSIEKEIENLNgkkEELEEELEELEAALrdlesrlgdlkKERDELEAQLRELERKI 905
|
250 260
....*....|....*....|....*....
gi 149053243 713 GQLESTLREKSQQLESLQEIKVNLEEQLK 741
Cdd:TIGR02169 906 EELEAQIEKKRKRLSELKAKLEALEEELS 934
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
13-302 |
3.48e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 3.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 13 DLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLR 92
Cdd:TIGR02169 724 EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS--------ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE 795
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 93 LEQERAQWAQYRESADREIADLRRRL-SEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 171
Cdd:TIGR02169 796 IQAELSKLEEEVSRIEARLREIEQKLnRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA 875
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 172 sKVKELNHYLEAEKSCRTDLEmyvavlnTQKSVLQEDAEKLRKElhevchlLEQERQQHNQLKHTWQKANDQFLESQRLL 251
Cdd:TIGR02169 876 -ALRDLESRLGDLKKERDELE-------AQLRELERKIEELEAQ-------IEKKRKRLSELKAKLEALEEELSEIEDPK 940
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 149053243 252 MRDMQRMEIVLTSEQLrqVEELKKKDQEEDEQQRINkgkdNKKIDTEEEVK 302
Cdd:TIGR02169 941 GEDEEIPEEELSLEDV--QAELQRVEEEIRALEPVN----MLAIQEYEEVL 985
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
91-293 |
1.56e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 91 LRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 170
Cdd:PTZ00121 1557 LKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVE 1636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 171 ASKVKELNHYLEAEKSCRTDLEMYVavlntQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANdQFLESQRL 250
Cdd:PTZ00121 1637 QLKKKEAEEKKKAEELKKAEEENKI-----KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAK-KAEELKKK 1710
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 149053243 251 LMRDMQRMEIVLTSEQLR--QVEELKKKDQEED---EQQRINKGKDNK 293
Cdd:PTZ00121 1711 EAEEKKKAEELKKAEEENkiKAEEAKKEAEEDKkkaEEAKKDEEEKKK 1758
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
94-806 |
2.28e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.96 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 94 EQERAQWAQYRESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAS 172
Cdd:pfam02463 285 EEELKLLAKEEEELKSELLKLERRKVDDEEKlKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 173 KVKELNHYLEAEKSCRTDLEMyvavLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLm 252
Cdd:pfam02463 365 QEKLEQLEEELLAKKKLESER----LSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESI- 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 253 rDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKidTEEEVKIPVVCALTQEESSTPLSNEEEHLDSTHGSV 332
Cdd:pfam02463 440 -ELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLV--KLQEQLELLLSRQKLEERSQKESKARSGLKVLLALI 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 333 HSLDADLLLPSGDPFSKSDNDMFKEGLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTV 412
Cdd:pfam02463 517 KDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAV 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 413 SLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVHNAGNKLGRRCDM 492
Cdd:pfam02463 597 LEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELL 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 493 CSNYEKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQIsaLVLRAQASEVLLEELQQ 572
Cdd:pfam02463 677 EIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEE--LKLLKQKIDEEEEEEEK 754
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 573 SFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQLAEdfilpdTVQVLRELVLKYRENIVHVRTAA 652
Cdd:pfam02463 755 SRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRA------LEEELKEEAELLEEEQLLIEQEE 828
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 653 DHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEI 732
Cdd:pfam02463 829 KIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQK 908
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 149053243 733 KVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILN 806
Cdd:pfam02463 909 LNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE 982
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
125-410 |
3.36e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 44.27 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 125 ENLENEMKKAQEDAEKLRSvvmpmeKEIAAL-KDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDlemyvaVLNTQKS 203
Cdd:PTZ00108 1105 EKLNAELEKKEKELEKLKN------TTPKDMwLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGK------ASKLRKP 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 204 VLQEDAEKLR-KELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDE 282
Cdd:PTZ00108 1173 KLKKKEKKKKkSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 283 QQRINKGKDNKKIDTEEEVKIPV----VCALTQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSdNDMFKEG 358
Cdd:PTZ00108 1253 SSEDNDEFSSDDLSKEGKPKNAPkrvsAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKK-KKSEKKT 1331
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 149053243 359 LRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFD 410
Cdd:PTZ00108 1332 ARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDED 1383
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
12-292 |
4.12e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 4.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 12 EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHL 91
Cdd:PTZ00121 1561 EEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKK 1640
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 92 RLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 171
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE 1720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 172 SKVKELNHYLEAEKSCRTDLEMyvavlntqksvlQEDAEKLRKElhevchllEQERQQHNQLKHTWQKANDQFLESQRLL 251
Cdd:PTZ00121 1721 LKKAEEENKIKAEEAKKEAEED------------KKKAEEAKKD--------EEEKKKIAHLKKEEEKKAEEIRKEKEAV 1780
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 149053243 252 MRDmqrmEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDN 292
Cdd:PTZ00121 1781 IEE----ELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEG 1817
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
636-815 |
4.73e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 636 ELVLKYRENIVHVRTAADHMEEKLKAEIlflkEQIQAEQCLKENLEETLQLEIENCKEEI----ASISSLKAELERIKVE 711
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAEL----EELEAELAELEAELEELRLELEELELELeeaqAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 712 KGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLER 791
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180
....*....|....*....|....
gi 149053243 792 IRQADSLERIRAILNDTKLTDINQ 815
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEE 407
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
95-288 |
5.05e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 95 QERAQWAQYRESADREIADLRRRLSEGQ-EEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASK 173
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 174 VKELNHYLE----AEKSCR-------------TDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHT 236
Cdd:COG4942 100 EAQKEELAEllraLYRLGRqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE----LAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 149053243 237 WQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINK 288
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
649-816 |
5.19e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 649 RTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLES 728
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 729 LQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVK----LSQTLQVQLERIRQADSLERIRAI 804
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEelleALRAAAELAAQLEELEEAEEALLE 414
|
170
....*....|..
gi 149053243 805 LNDTKLTDINQL 816
Cdd:COG1196 415 RLERLEEELEEL 426
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
32-180 |
5.59e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 32 RTQLWEAQAEMENIKAIATVS-ENTKQEAIDEVKRQWreevaslqavmketvrdyehqFHLRLEQERaqwaQYREsADRE 110
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI---------------------HKLRNEFEK----ELRE-RRNE 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 111 IADLRRRLSegQEEENLENEMkkaqEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHY 180
Cdd:PRK12704 84 LQKLEKRLL--QKEENLDRKL----ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
108-237 |
6.72e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 6.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 108 DREIADLRRRLSEGQEEENLENEMKKAQEDAE--KLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNhyLEAEK 185
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEirRLEEQVERLEAEVEELEAELEEKDERIERLER-ELSEAR--SEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 149053243 186 SCRTDLEMyvavlntqkSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 237
Cdd:COG2433 460 EIRKDREI---------SRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
43-184 |
7.02e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 7.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 43 ENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQERAQWAQYRESADREIADLRRRLSEGQ 122
Cdd:COG2433 376 LSIEEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVE-RLEAEVEELEAELEEKDERIERLERELSEAR 454
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149053243 123 EEENLEnemkkAQEDAEklrsvVMPMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAE 184
Cdd:COG2433 455 SEERRE-----IRKDRE-----ISRLDREIERLERELEEERERIEELK-RKLERLKELWKLE 505
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
660-792 |
8.84e-04 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 43.13 E-value: 8.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 660 KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIA-------SISSLKAELERIKVEKGQLEStlreksqQLESLQEI 732
Cdd:pfam05911 680 TEENKRLKEEFEQLKSEKENLEVELASCTENLESTKSqlqeseqLIAELRSELASLKESNSLAET-------QLKCMAES 752
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 733 KVNLEEQLkkeTAAKATVEQLmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERI 792
Cdd:pfam05911 753 YEDLETRL---TELEAELNEL----RQKFEALEVELEEEKNCHEELEAKCLELQEQLERN 805
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
657-811 |
9.02e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.12 E-value: 9.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 657 EKLKAEILFLKEQI-QAEQCLKENLEETLQLEIENCK------EEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 729
Cdd:TIGR02168 680 EELEEKIEELEEKIaELEKALAELRKELEELEEELEQlrkeleELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 730 QEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKlsqtlQVQLERIRQADSLERIRAILNDTK 809
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRA-----ELTLLNEEAANLRERLESLERRIA 834
|
..
gi 149053243 810 LT 811
Cdd:TIGR02168 835 AT 836
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
556-803 |
9.45e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 556 LVLRAQASEVLLEELQQsfsqAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhvslqlaedfiLPDTVQVLR 635
Cdd:COG4942 11 LALAAAAQADAAAEAEA----ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA-----------LARRIRALE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 636 ELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQL 715
Cdd:COG4942 76 QELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 716 ESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQA 795
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*...
gi 149053243 796 DSLERIRA 803
Cdd:COG4942 236 AAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
44-232 |
9.49e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 9.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 44 NIKAIATVSEntKQEAIDEVKRQWREEVASLQAVMKETVRdyehQFHLRLEQERAQWAQYR-ESADREIADL---RRRLS 119
Cdd:COG4913 608 NRAKLAALEA--ELAELEEELAEAEERLEALEAELDALQE----RREALQRLAEYSWDEIDvASAEREIAELeaeLERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 120 EGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELNHYLEAEKSCRTDLEM 193
Cdd:COG4913 682 ASSDDlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaAEDLARLELRALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|....*....
gi 149053243 194 yvAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQ 232
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
650-815 |
9.99e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.74 E-value: 9.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 650 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 729
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 730 QEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTK 809
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEAR 408
|
....*.
gi 149053243 810 LTDINQ 815
Cdd:TIGR02168 409 LERLED 414
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
428-793 |
1.24e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.41 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 428 DQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQE 507
Cdd:pfam15921 321 DLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQN 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 508 AETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQakrdVQEQMAV 587
Cdd:pfam15921 401 KRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQ----LESTKEM 476
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 588 LMQSREQVSEELVRLQKDNDSLQgkhSLHVSLQLAEDFILPDTVQV--LRELVLKYRENIVHVRTAADHM---EEKLKAE 662
Cdd:pfam15921 477 LRKVVEELTAKKMTLESSERTVS---DLTASLQEKERAIEATNAEItkLRSRVDLKLQELQHLKNEGDHLrnvQTECEAL 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 663 ILFLKEQIQAEQCLKENLEETLQL-----------EIENCKEEiASISSLKAELERIKVEKGQLESTLREKSQQLESLQE 731
Cdd:pfam15921 554 KLQMAEKDKVIEILRQQIENMTQLvgqhgrtagamQVEKAQLE-KEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL 632
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149053243 732 IKVNL----EEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIR 793
Cdd:pfam15921 633 EKVKLvnagSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLK 698
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
108-229 |
1.30e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 108 DREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKE---LN 178
Cdd:COG1579 16 DSELDRLEHRLKELPAElAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlgnVRNNKEyeaLQ 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 149053243 179 HYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQ 229
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
37-234 |
1.54e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 37 EAQAEMENIKAIATVSENTKQ-----EAIDEVKRQWREEVASLQAV--MKETVRDYEHQFHLRL-EQERAQWAQYRESAD 108
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREqiellEPIRELAERYAAARERLAELeyLRAALRLWFAQRRLELlEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 109 REIADLRRRLSEGQEE-ENLENEMKKAQEDAEKlrsvvmPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEksc 187
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEA-LLAALGLPLPAS--- 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 149053243 188 RTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLK 234
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE 425
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
511-731 |
1.96e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 511 RDQVKKLQLMLRQANDQLEKTMKEKQELEDFL--------RQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAK---- 578
Cdd:PLN02939 48 KKRGKNIAPKQRSSNSKLQSNTDENGQLENTSlrtvmelpQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEqlsd 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 579 ----------RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhVSLQLAEDFILPDT-------VQVLRELVLKY 641
Cdd:PLN02939 128 fqledlvgmiQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINI-LEMRLSETDARIKLaaqekihVEILEEQLEKL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 642 RENIVHVRTAADHMEEKLKAEILFLKEqiqaeqclkENLeeTLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLRE 721
Cdd:PLN02939 207 RNELLIRGATEGLCVHSLSKELDVLKE---------ENM--LLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRE 275
|
250
....*....|
gi 149053243 722 KSQQLESLQE 731
Cdd:PLN02939 276 LESKFIVAQE 285
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
16-772 |
2.13e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 16 RQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEhqfhlrl 93
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAE------- 1131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 94 EQERAQWAQYRESAdREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAalkDKLTEAEDKIKELEASK 173
Cdd:PTZ00121 1132 EARKAEDARKAEEA-RKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKA---EELRKAEDARKAEAARK 1207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 174 VKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMR 253
Cdd:PTZ00121 1208 AEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAE 1287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 254 DMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTE------EEVKIPVVCALTQEESST---PLSNEEEH 324
Cdd:PTZ00121 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaakkkaEEAKKAAEAAKAEAEAAAdeaEAAEEKAE 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 325 LDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKEGLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDEsdfgplvgads 404
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE----------- 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 405 vsenfdtvslgslqmpsgfmLTKDQERAIKAMTPEQEETASllssvtqgmesayvspsgyllvsetewnllqKEVHNAGN 484
Cdd:PTZ00121 1436 --------------------AKKKAEEAKKADEAKKKAEEA-------------------------------KKAEEAKK 1464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 485 KlgrrcdmcsnyekqlqgiqIQEAETRDQVKKLQLMLRQAnDQLEKTMKEKQELEDFLRQSAEDSShqiSALVLRAQASE 564
Cdd:PTZ00121 1465 K-------------------AEEAKKADEAKKKAEEAKKA-DEAKKKAEEAKKKADEAKKAAEAKK---KADEAKKAEEA 1521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 565 VLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVR----LQKDNDSLQGKHSLHVSLQLAEDFILPDTVQVLRELVLK 640
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKkaeeKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 641 YRENIVHVRTAADHMEEKLKAeilflkEQIQAEQCLKENLEETLQLEiencKEEIASISSLKAELERIKVEKGQLESTLR 720
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKA------EELKKAEEEKKKVEQLKKKE----AEEKKKAEELKKAEEENKIKAAEEAKKAE 1671
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 149053243 721 E---KSQQLESLQEIKVNLEEQLKKETAAKATVEQL---MFEEKNKAQRLQTELDVSE 772
Cdd:PTZ00121 1672 EdkkKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELkkkEAEEKKKAEELKKAEEENK 1729
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
57-772 |
2.85e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.26 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 57 QEAIDEVKRQWREEVASLQAVMKETVRDYEHQ-FHLRLE----QERAQWAQYRESAdreIADLRRRlsEGQEEENLENE- 130
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQkFYLRQSvidlQTKLQEMQMERDA---MADIRRR--ESQSQEDLRNQl 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 131 -----------------MKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAED----KIKELEASKVKELNHYLEAEKSCRT 189
Cdd:pfam15921 148 qntvheleaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEasgkKIYEHDSMSTMHFRSLGSAISKILR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 190 DLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH-NQL-------------KHTWQKANDQFLESQRLLMRDM 255
Cdd:pfam15921 228 ELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRiEQLiseheveitglteKASSARSQANSIQSQLEIIQEQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 256 QRMEivlTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCALTQ-----EESSTPLSNEEEHLDSTHG 330
Cdd:pfam15921 308 ARNQ---NSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEarterDQFSQESGNLDDQLQKLLA 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 331 SVHSLDADLLLPSGDPFSKSDNDMFK----EGLRRAQSTDSLGTSsslQSKALGYNYKAKSAGNLDESdfgpLVGADSVS 406
Cdd:pfam15921 385 DLHKREKELSLEKEQNKRLWDRDTGNsitiDHLRRELDDRNMEVQ---RLEALLKAMKSECQGQMERQ----MAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 407 ENFDTVSLGSLQMPSGFMLTKD--QERAIKAMTPEQ-EETASLLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVHNAG 483
Cdd:pfam15921 458 ESLEKVSSLTAQLESTKEMLRKvvEELTAKKMTLESsERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLK 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 484 NKlgrrCDMCSNYEKQLQGIQIQEAET-------RDQVKKLQLMLRQ----------ANDQLEKTMKEKQ-ELEDF--LR 543
Cdd:pfam15921 538 NE----GDHLRNVQTECEALKLQMAEKdkvieilRQQIENMTQLVGQhgrtagamqvEKAQLEKEINDRRlELQEFkiLK 613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 544 QSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ------------G 611
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKrnfrnkseemetT 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 612 KHSLHVSLQLAEdfilpDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAEilflKEQIQAEQCLKENLEETL---QLEI 688
Cdd:pfam15921 694 TNKLKMQLKSAQ-----SELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAK----RGQIDALQSKIQFLEEAMtnaNKEK 764
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 689 ENCKEEiasISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQR--LQT 766
Cdd:pfam15921 765 HFLKEE---KNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRlkLQH 841
|
....*.
gi 149053243 767 ELDVSE 772
Cdd:pfam15921 842 TLDVKE 847
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
115-302 |
3.44e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 115 RRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteAEDKIKELEASKVKELNHYLEAEKSCRTDLEM- 193
Cdd:pfam17380 298 QERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERM--AMERERELERIRQEERKRELERIRQEEIAMEIs 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 194 YVAVLNTQKSVLQEDAEKLRKELHEV--CHLLEQERQQHNQLKHTW------QKANDQFLESQRLLMRDMQRMEIVLTSE 265
Cdd:pfam17380 376 RMRELERLQMERQQKNERVRQELEAArkVKILEEERQRKIQQQKVEmeqiraEQEEARQREVRRLEEERAREMERVRLEE 455
|
170 180 190
....*....|....*....|....*....|....*...
gi 149053243 266 QLRQVE-ELKKKDQEEDEQQRINKGKDNKKIDTEEEVK 302
Cdd:pfam17380 456 QERQQQvERLRQQEEERKRKKLELEKEKRDRKRAEEQR 493
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
391-614 |
3.57e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 3.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 391 LDESDFGPLvgADSVSENFDTVSLGSLQMpsgfmltKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYLLVSET 470
Cdd:COG4913 218 LEEPDTFEA--ADALVEHFDDLERAHEAL-------EDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQR 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 471 EWNLLQKEVHNAGNKLGRRcdmcsnyEKQLQGIQIQEAETRDQVKKLQLMLRQAN----DQLEKTMKEKQELEDFLRQSA 546
Cdd:COG4913 289 RLELLEAELEELRAELARL-------EAELERLEARLDALREELDELEAQIRGNGgdrlEQLEREIERLERELEERERRR 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149053243 547 EDSSHQISALVLRAQASEVLLEELQ-------QSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHS 614
Cdd:COG4913 362 ARLEALLAALGLPLPASAEEFAALRaeaaallEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKS 436
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
12-176 |
3.91e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 12 EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAiatvsENTKQEAIDEVKRQWrEEVASLQAVMKETVRDYEHqfHL 91
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELRE-----ELEKLEKLLQLLPLY-QELEALEAELAELPERLEE--LE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 92 RLEQERAQWAQYRESADREIADLRRRLSEGQEEENL--ENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKEL 169
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLatEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
....*..
gi 149053243 170 EASKVKE 176
Cdd:COG4717 233 ENELEAA 239
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
21-171 |
4.16e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 21 LQAAQDDLGHLRTQLWEAQAEMENIKAiatvSENTKQEAIDEVKRQWRE----EVASLQAVMKetvrdyehqfhlRLEQE 96
Cdd:COG4913 290 LELLEAELEELRAELARLEAELERLEA----RLDALREELDELEAQIRGnggdRLEQLEREIE------------RLERE 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149053243 97 RAQWAQYRESADREIADLrrRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 171
Cdd:COG4913 354 LEERERRRARLEALLAAL--GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
500-818 |
4.47e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.82 E-value: 4.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 500 LQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEdsshqisalvLRAQASEVL-LEELQQSFSQAK 578
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE----------LKEKAEEYIkLSEFYEEYLDEL 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 579 RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQlaedfilpDTVQVLRELVLKYREnivhVRTAADHMEEK 658
Cdd:PRK03918 310 REIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELE--------KRLEELEERHELYEE----AKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 659 LKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLREksqqleslqeikv 734
Cdd:PRK03918 378 KKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGElkkeIKELKKAIEELKKAKGKCPVCGRE------------- 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 735 nLEEQLKKETAAKATVEQlmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDIN 814
Cdd:PRK03918 445 -LTEEHRKELLEEYTAEL-----KRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLE 518
|
....
gi 149053243 815 QLPE 818
Cdd:PRK03918 519 ELEK 522
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
26-300 |
5.07e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.41 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 26 DDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAID--EVKRQWREEVASLQAVMKETVRDYEhqfhlrlEQERAqwaqy 103
Cdd:PRK02224 206 ERLNGLESELAELDEEIERYEEQREQARETRDEADEvlEEHEERREELETLEAEIEDLRETIA-------ETERE----- 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 104 RESADREIADLRRRLSEGQEE----------------------ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161
Cdd:PRK02224 274 REELAEEVRDLRERLEELEEErddllaeaglddadaeavearrEELEDRDEELRDRLEECRVAAQAHNEEAESLREDADD 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 162 AEDKIKELEaSKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE-------DAEKLRKELHEVCHLLEQERQQHNQLK 234
Cdd:PRK02224 354 LEERAEELR-EEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 235 HTWQKANDQFLESQRLLM--------RDMQRMEIVLTSEQLR-QVEELKK-----KDQEEDEQQRINKGKDNKKIDTEEE 300
Cdd:PRK02224 433 ATLRTARERVEEAEALLEagkcpecgQPVEGSPHVETIEEDReRVEELEAeledlEEEVEEVEERLERAEDLVEAEDRIE 512
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
656-809 |
5.18e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 40.67 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 656 EEKLKAEILFLKEQIQAEQ---CLKENLEETLQLeienckeeIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEI 732
Cdd:PRK11281 38 EADVQAQLDALNKQKLLEAedkLVQQDLEQTLAL--------LDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDD 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 733 KVnleeQLKKETAAKATVEQLMfeeknkaQRLQTELDVSEQVQRDFVKL-SQ--TLQVQLERIRQADS-----LERIRAI 804
Cdd:PRK11281 110 ND----EETRETLSTLSLRQLE-------SRLAQTLDQLQNAQNDLAEYnSQlvSLQTQPERAQAALYansqrLQQIRNL 178
|
....*
gi 149053243 805 LNDTK 809
Cdd:PRK11281 179 LKGGK 183
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
497-685 |
6.50e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 6.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 497 EKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQ 576
Cdd:COG4942 54 LKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 577 AKRDVQeQMAVLMQSREQVSEELVRLQKDNDSLQgkhslhVSLQLAEdfilpDTVQVLRELVLKYRENIVHVRTAADHME 656
Cdd:COG4942 134 AVRRLQ-YLKYLAPARREQAEELRADLAELAALR------AELEAER-----AELEALLAELEEERAALEALKAERQKLL 201
|
170 180
....*....|....*....|....*....
gi 149053243 657 EKLKAEILFLKEQIQAEQCLKENLEETLQ 685
Cdd:COG4942 202 ARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
574-797 |
7.44e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 574 FSQAKRDvqEQMAVLMQSREQVSEELVRLQKDNDSLQGKH---SLHVSLQLAEDFIlPDTVQVLRELVLKYREnIVHVRT 650
Cdd:PRK04863 779 FGRAARE--KRIEQLRAEREELAERYATLSFDVQKLQRLHqafSRFIGSHLAVAFE-ADPEAELRQLNRRRVE-LERALA 854
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 651 AADHMEEKLKAEILFLKEQIQA-EQCLKEN---LEETLQLEIENCKEEIASISSLKAELERIKVEKGQLE---STLREKS 723
Cdd:PRK04863 855 DHESQEQQQRSQLEQAKEGLSAlNRLLPRLnllADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEpivSVLQSDP 934
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 149053243 724 QQLESLQEIKVNLEEQLKKETAAKATVEQLM-----FEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 797
Cdd:PRK04863 935 EQFEQLKQDYQQAQQTQRDAKQQAFALTEVVqrrahFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQA 1013
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-173 |
7.56e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 39.92 E-value: 7.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 11 DEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAiatvSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFH 90
Cdd:COG1196 336 EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA----ELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 91 LRLEQERAQwAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 170
Cdd:COG1196 412 LLERLERLE-EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
...
gi 149053243 171 ASK 173
Cdd:COG1196 491 ARL 493
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
12-283 |
9.30e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 39.55 E-value: 9.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 12 EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKA-IATVsentkQEAIDEVKR---QWREEVASLQAVMKETVRD--Y 85
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSqLADY-----QQALDVQQTraiQYQQAVQALEKARALCGLPdlT 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 86 EHQFHLRLEQERAQwaqyRESADREIADLRRRLS-----EGQEEENLE------------NEMKKAQEDAEKLRSVVMPM 148
Cdd:COG3096 436 PENAEDYLAAFRAK----EQQATEEVLELEQKLSvadaaRRQFEKAYElvckiageversQAWQTARELLRRYRSQQALA 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 149 EKEiAALKDKLTEAEDKIKELEASK--VKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQE 226
Cdd:COG3096 512 QRL-QQLRAQLAELEQRLRQQQNAErlLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQL 590
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053243 227 RQQHNQLKHT---WQKAND----------QFLESQRLLMRDMQRmeivlTSEQLRQVEELKKKDQEEDEQ 283
Cdd:COG3096 591 RARIKELAARapaWLAAQDalerlreqsgEALADSQEVTAAMQQ-----LLEREREATVERDELAARKQA 655
|
|
| |
