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Conserved domains on  [gi|149058463|gb|EDM09620|]
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coagulation factor XIII, beta subunit (predicted) [Rattus norvegicus]

Protein Classification

CCP domain-containing protein( domain architecture ID 13332024)

CCP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 169-389 2.29e-28

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 114.36  E-value: 2.29e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 169 TFKVKDRVQYTCTAGYYTATGKQTEeVECQAHGWSFTPQCNKLMCSSLRLIENGYFHPVKQTYeeGDVVQFFCHENYYLS 248
Cdd:PHA02927  43 NYNIGDTIEYLCLPGYRKQKMGPIY-AKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLI 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 249 GSDLIQCY-----NFGWYPESPICEGRRnrCPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVCENGKWTE 323
Cdd:PHA02927 120 GESKSYCElgstgSMVWNPEAPICESVK--CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSD 197

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149058463 324 PPKCveNIENCkPPPVIANGAVVDDLLASYTTGSSVEYRCNEYYLLKGSQTSLCEQG-TWSSP-PVCL 389
Cdd:PHA02927 198 PPTC--QIVKC-PHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGnTWQPElPKCV 262
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 50-267 1.05e-12

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 68.53  E-value: 1.05e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  50 SIDKKLSFFCLAGYATESgKQEEKIRCTAEGWSPKPRCYK-KCLKPV-LRNGYVSDGKVLYKiqENMRYGCTSGYKTTGG 127
Cdd:PHA02927  45 NIGDTIEYLCLPGYRKQK-MGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDFG--SSITYSCNSGYQLIGE 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 128 KDE--EVVQCLSEGWSSQ-PSCrkEQETC-LAPELHHGNYSTIQRTFKVKDRVQYTCTAGyYTATGKQTeeVECQAHGWS 203
Cdd:PHA02927 122 SKSycELGSTGSMVWNPEaPIC--ESVKCqSPPSISNGRHNGYEDFYTDGSVVTYSCNSG-YSLIGNSG--VLCSGGEWS 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463 204 FTPQCNKLMCSSlRLIENGYFHP-VKQTYEEGDVVQFFCHENYYLSGSDLIQCY-NFGWYPESPIC 267
Cdd:PHA02927 197 DPPTCQIVKCPH-PTISNGYLSSgFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSpGNTWQPELPKC 261
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 462-516 1.64e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


:

Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 48.23  E-value: 1.64e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 462 CASPPVIRNGNIVSlVASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:cd00033    1 CPPPPVPENGTVTG-SKGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSpPPPTC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 169-389 2.29e-28

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 114.36  E-value: 2.29e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 169 TFKVKDRVQYTCTAGYYTATGKQTEeVECQAHGWSFTPQCNKLMCSSLRLIENGYFHPVKQTYeeGDVVQFFCHENYYLS 248
Cdd:PHA02927  43 NYNIGDTIEYLCLPGYRKQKMGPIY-AKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLI 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 249 GSDLIQCY-----NFGWYPESPICEGRRnrCPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVCENGKWTE 323
Cdd:PHA02927 120 GESKSYCElgstgSMVWNPEAPICESVK--CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSD 197

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149058463 324 PPKCveNIENCkPPPVIANGAVVDDLLASYTTGSSVEYRCNEYYLLKGSQTSLCEQG-TWSSP-PVCL 389
Cdd:PHA02927 198 PPTC--QIVKC-PHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGnTWQPElPKCV 262
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 50-267 1.05e-12

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 68.53  E-value: 1.05e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  50 SIDKKLSFFCLAGYATESgKQEEKIRCTAEGWSPKPRCYK-KCLKPV-LRNGYVSDGKVLYKiqENMRYGCTSGYKTTGG 127
Cdd:PHA02927  45 NIGDTIEYLCLPGYRKQK-MGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDFG--SSITYSCNSGYQLIGE 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 128 KDE--EVVQCLSEGWSSQ-PSCrkEQETC-LAPELHHGNYSTIQRTFKVKDRVQYTCTAGyYTATGKQTeeVECQAHGWS 203
Cdd:PHA02927 122 SKSycELGSTGSMVWNPEaPIC--ESVKCqSPPSISNGRHNGYEDFYTDGSVVTYSCNSG-YSLIGNSG--VLCSGGEWS 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463 204 FTPQCNKLMCSSlRLIENGYFHP-VKQTYEEGDVVQFFCHENYYLSGSDLIQCY-NFGWYPESPIC 267
Cdd:PHA02927 197 DPPTCQIVKCPH-PTISNGYLSSgFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSpGNTWQPELPKC 261
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 274-328 4.36e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.24  E-value: 4.36e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 274 CPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVC-ENGKWT-EPPKCV 328
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCtENGGWSpPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 213-267 4.40e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 58.31  E-value: 4.40e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463   213 CSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCYNFG-WYPESPIC 267
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGtWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
213-267 3.29e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 3.29e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463  213 CSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCYNFG-WYPESPIC 267
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGtWSPPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 462-516 1.64e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 48.23  E-value: 1.64e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 462 CASPPVIRNGNIVSlVASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:cd00033    1 CPPPPVPENGTVTG-SKGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSpPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 462-516 1.02e-05

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 43.28  E-value: 1.02e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463   462 CASPPVIRNGNIVSlVASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:smart00032   1 CPPPPDIENGTVTS-SSGTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 94-147 1.06e-03

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 37.44  E-value: 1.06e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463  94 PVLRNGYVSDGKVLYKIQENMRYGCTSGYKTTGgkdEEVVQCLSEG-WS-SQPSCR 147
Cdd:cd00033    5 PVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVG---SSTITCTENGgWSpPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
462-516 3.07e-03

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 36.32  E-value: 3.07e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463  462 CASPPVIRNGNIVSLvASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:pfam00084   1 CPPPPDIPNGKVSAT-KNEYNYGASVSYECDPGYRLVGSPTITCQeDGTWSpPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 94-146 7.53e-03

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 35.19  E-value: 7.53e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 149058463    94 PVLRNGYVSDGKVLYKIQENMRYGCTSGYKTTGGkdeEVVQCLSEG-WS-SQPSC 146
Cdd:smart00032   5 PDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGS---STITCLENGtWSpPPPTC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 169-389 2.29e-28

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 114.36  E-value: 2.29e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 169 TFKVKDRVQYTCTAGYYTATGKQTEeVECQAHGWSFTPQCNKLMCSSLRLIENGYFHPVKQTYeeGDVVQFFCHENYYLS 248
Cdd:PHA02927  43 NYNIGDTIEYLCLPGYRKQKMGPIY-AKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLI 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 249 GSDLIQCY-----NFGWYPESPICEGRRnrCPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVCENGKWTE 323
Cdd:PHA02927 120 GESKSYCElgstgSMVWNPEAPICESVK--CQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSD 197

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149058463 324 PPKCveNIENCkPPPVIANGAVVDDLLASYTTGSSVEYRCNEYYLLKGSQTSLCEQG-TWSSP-PVCL 389
Cdd:PHA02927 198 PPTC--QIVKC-PHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGnTWQPElPKCV 262
PHA02831 PHA02831
EEV host range protein; Provisional
 168-330 3.90e-13

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 70.02  E-value: 3.90e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 168 RTFKVKDRVQYTCTAGYYTATgkqteeVECQAHGWSFTPQC-NKLMCSSLRLIENGYFHPVKQTYEEGDVVQFFCH---- 242
Cdd:PHA02831  38 KVYEENENLEYKCNNNFDKVF------VTCNNGSWSTKNMCiGKRNCKDPVTILNGYIKNKKDQYSFGDSVTYACKvnkl 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 243 ENYYLSGSDLIQCYNFGWYPESPICegRRNRCPPPPVPlNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVCE-NGKW 321
Cdd:PHA02831 112 EKYSIVGNETVKCINKQWVPKYPVC--KLIRCKYPALQ-NGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDiNSIW 188

                        170
                 ....*....|
gi 149058463 322 TEP-PKCVEN 330
Cdd:PHA02831 189 YPGiPKCVKD 198
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 152-389 8.60e-13

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 69.73  E-value: 8.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 152 TCLAPELHHGNYSTIQRTFKVKDRVQYTCTAGYYTATGKQTeeveCQAHGWSFTPQCNKlMCSSLRLIENGYFHPVKQTY 231
Cdd:PHA02954  20 TCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPNAV----CETDKWKYENPCKK-MCTVSDYVSELYDKPLYEVN 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 232 E------EGDVVQFFCHE-NYYLSGSDLIQCYNfgwypespicegrrNRCPPPPVPLNSkVEPHSTTYRHGEVVHIECEL 304
Cdd:PHA02954  95 StitlicKDETKYFRCEEkNGNTSWNDTVTCPN--------------AECQPLQLEHGS-CQPVKEKYSFGEHITINCDV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 305 NFAIQGSDALVCENGKWTEPPKCVENIEnckpPPVIANGAVVDdllASYTTGSSVEYRCNEYYLLKGSQTSLCEQGTWSS 384
Cdd:PHA02954 160 GYEVIGASYISCTANSWNVIPSCQQKCD----IPSLSNGLISG---STFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWNP 232


                 ....*.
gi 149058463 385 P-PVCL 389
Cdd:PHA02954 233 VlPICV 238
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 50-267 1.05e-12

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 68.53  E-value: 1.05e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  50 SIDKKLSFFCLAGYATESgKQEEKIRCTAEGWSPKPRCYK-KCLKPV-LRNGYVSDGKVLYKiqENMRYGCTSGYKTTGG 127
Cdd:PHA02927  45 NIGDTIEYLCLPGYRKQK-MGPIYAKCTGTGWTLFNQCIKrRCPSPRdIDNGQLDIGGVDFG--SSITYSCNSGYQLIGE 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 128 KDE--EVVQCLSEGWSSQ-PSCrkEQETC-LAPELHHGNYSTIQRTFKVKDRVQYTCTAGyYTATGKQTeeVECQAHGWS 203
Cdd:PHA02927 122 SKSycELGSTGSMVWNPEaPIC--ESVKCqSPPSISNGRHNGYEDFYTDGSVVTYSCNSG-YSLIGNSG--VLCSGGEWS 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463 204 FTPQCNKLMCSSlRLIENGYFHP-VKQTYEEGDVVQFFCHENYYLSGSDLIQCY-NFGWYPESPIC 267
Cdd:PHA02927 197 DPPTCQIVKCPH-PTISNGYLSSgFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSpGNTWQPELPKC 261
PHA02831 PHA02831
EEV host range protein; Provisional
 108-267 4.22e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 63.86  E-value: 4.22e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 108 YKIQENMRYGCTSGYkttggkDEEVVQCLSEGWSSQPSCRKEQeTCLAP-ELHHGNYSTIQRTFKVKDRVQYTCTAG--- 183
Cdd:PHA02831  40 YEENENLEYKCNNNF------DKVFVTCNNGSWSTKNMCIGKR-NCKDPvTILNGYIKNKKDQYSFGDSVTYACKVNkle 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 184 YYTATGKQTeeVECQAHGW-SFTPQCNKLMCSSLRLiENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQC-YNFGWY 261
Cdd:PHA02831 113 KYSIVGNET--VKCINKQWvPKYPVCKLIRCKYPAL-QNGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCdINSIWY 189


                 ....*.
gi 149058463 262 PESPIC 267
Cdd:PHA02831 190 PGIPKC 195
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 274-328 4.36e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.24  E-value: 4.36e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 274 CPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVC-ENGKWT-EPPKCV 328
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCtENGGWSpPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 213-267 4.40e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 58.31  E-value: 4.40e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463   213 CSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCYNFG-WYPESPIC 267
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGtWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 213-268 1.01e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 57.47  E-value: 1.01e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 213 CSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCY-NFGWYPESPICE 268
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSPPPPTCE 57
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 88-336 1.03e-10

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 63.18  E-value: 1.03e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  88 YKKCLKPVLRNGYVSDGKVLYKIQENMRYGCTSGYKTTggkDEEVVqCLSEGWSSQPSCRKeqeTCLAPELHHGNYStiQ 167
Cdd:PHA02954  18 YSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSL---DPNAV-CETDKWKYENPCKK---MCTVSDYVSELYD--K 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 168 RTFKVKDRVQYTCTAgyytatgkQTEEVECQAH----GWSFTPQCNKLMCSSLRLiENGYFHPVKQTYEEGDVVQFFCHE 243
Cdd:PHA02954  89 PLYEVNSTITLICKD--------ETKYFRCEEKngntSWNDTVTCPNAECQPLQL-EHGSCQPVKEKYSFGEHITINCDV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 244 NYYLSGSDLIQCYNFGWYPeSPICEgrrNRCPPPPVplnSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVCENGKWTE 323
Cdd:PHA02954 160 GYEVIGASYISCTANSWNV-IPSCQ---QKCDIPSL---SNGLISGSTFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWNP 232

                        250
                 ....*....|....
gi 149058463 324 P-PKCVENIENCKP 336
Cdd:PHA02954 233 VlPICVRSNEEFDP 246
PHA02831 PHA02831
EEV host range protein; Provisional
 291-451 1.13e-10

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 62.70  E-value: 1.13e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 291 TYRHGEVVHIECELNFaiqGSDALVCENGKWTEPPKCVENiENCKPPPVIANGAVVDDLlASYTTGSSVEYRCN----EY 366
Cdd:PHA02831  39 VYEENENLEYKCNNNF---DKVFVTCNNGSWSTKNMCIGK-RNCKDPVTILNGYIKNKK-DQYSFGDSVTYACKvnklEK 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 367 YLLKGSQTSLCEQGTW-SSPPVC-LEPCTIDVHHMNRNNIqmkwkYEGKILHGDMIDFVCKQGYVLPLSTTLSevsvqCN 444
Cdd:PHA02831 114 YSIVGNETVKCINKQWvPKYPVCkLIRCKYPALQNGFLNV-----FEKKFYYGDIVNFKCKKGFILLGSSVST-----CD 183


                 ....*..
gi 149058463 445 RGDVRYP 451
Cdd:PHA02831 184 INSIWYP 190
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 334-388 6.43e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 55.16  E-value: 6.43e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 334 CKPPPVIANGaVVDDLLASYTTGSSVEYRCNEYYLLKGSQTSLC-EQGTWS-SPPVC 388
Cdd:cd00033    1 CPPPPVPENG-TVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCtENGGWSpPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 274-327 1.07e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 54.45  E-value: 1.07e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463   274 CPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVC-ENGKWT-EPPKC 327
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSpPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
213-267 3.29e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 3.29e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463  213 CSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCYNFG-WYPESPIC 267
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGtWSPPFPEC 56
PHA02639 PHA02639
EEV host range protein; Provisional
 197-395 8.33e-09

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 57.37  E-value: 8.33e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 197 CQAHGwsftpqCNKLMCSSLRLIENGYFHPVKQTYEEGDVVQFFCHENYYLSGSDLIQCY----NFGWYPESPICEGRrn 272
Cdd:PHA02639  12 CYVHG------VKSIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIkdknNAIWSNKAPFCMLK-- 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 273 RCPPPPVPLNSKVEPHSTTYRHGEVVHIECE----LNFAIQGSDALVCENGKWTEPPKCVENIENCKpPPVIANGaVVDD 348
Cdd:PHA02639  84 ECNDPPSIINGKIYNKREMYKVGDEIYYVCNehkgVQYSLVGNEKITCIQDKSWKPDPPICKMINCR-FPALQNG-YING 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 149058463 349 LLAS--YTTGSSVEYRCNEYYLLKGSQTSLCE-QGTW-SSPPVCLEPCTID 395
Cdd:PHA02639 162 IPSNkkFYYKTRVGFSCKSGFDLVGEKYSTCNiNATWfPSIPTCVRNKPID 212
PHA02817 PHA02817
EEV Host range protein; Provisional
 208-348 1.08e-08

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 56.10  E-value: 1.08e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 208 CNKLMCSSLRLIENGYFHPVKQTYEEGDVVQFFCHEN-----YYLSGSDLIQCYNFG-WYPESPICEGRRNRCPPPPvpl 281
Cdd:PHA02817  19 CDLNKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGkWNKEFPVCKIIRCRFPALQ--- 95

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149058463 282 NSKVE--PHSTTYRHGEVVHIECELNFAIQGSDALVCE-NGKW-TEPPKCVENieNCKPPPVIANGAVVDD 348
Cdd:PHA02817  96 NGFVNgiPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGiNSSWiPKVPICSRD--NITYNKIYINKVNIDD 164
Sushi pfam00084
Sushi repeat (SCR repeat);
274-327 2.40e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 50.58  E-value: 2.40e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463  274 CPPPPVPLNSKVEPHSTTYRHGEVVHIECELNFAIQGSDALVC-ENGKWT-EPPKC 327
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCqEDGTWSpPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 334-388 6.72e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 49.45  E-value: 6.72e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463   334 CKPPPVIANGAVVDDLlASYTTGSSVEYRCNEYYLLKGSQTSLC-EQGTWS-SPPVC 388
Cdd:smart00032   1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITClENGTWSpPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 462-516 1.64e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 48.23  E-value: 1.64e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463 462 CASPPVIRNGNIVSlVASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:cd00033    1 CPPPPVPENGTVTG-SKGSYSYGSTVTYSCNEGYTLVGSSTITCTeNGGWSpPPPTC 56
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 274-516 2.03e-07

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 52.73  E-value: 2.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 274 CPPPPVPLNSKVE-----PHSTTYRHGEVVHIECELNFAIQ--GSDALVCENGKWTEPPKCVEniENCKPPPVIANGAVV 346
Cdd:PHA02927  21 CTIPSRPINMKFKnsvetDANANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTGWTLFNQCIK--RRCPSPRDIDNGQLD 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 347 ddlLASYTTGSSVEYRCNEYYLLKGSQTSLCEQGTWSSppvclepctidvhhmnrnniqMKWKYEGkilhgdmidfvckq 426
Cdd:PHA02927  99 ---IGGVDFGSSITYSCNSGYQLIGESKSYCELGSTGS---------------------MVWNPEA-------------- 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 427 gyvlplsttlsevsvqcnrgdvryPVCvrrESKgMCASPPVIRNGNiVSLVASTYENGSSVEYQCFDSHFLQGSRDAYCV 506
Cdd:PHA02927 141 ------------------------PIC---ESV-KCQSPPSISNGR-HNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCS 191

                        250
                 ....*....|
gi 149058463 507 DGVWTTPPSC 516
Cdd:PHA02927 192 GGEWSDPPTC 201
PHA02639 PHA02639
EEV host range protein; Provisional
 91-267 1.28e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.43  E-value: 1.28e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  91 CLKPV-LRNGYVSDGKVLYKIQENMRYGCTSGYKTTGGKDEEVVQCLSEG-WSSQPSCRKEQETCLAPELHHGNYSTIQR 168
Cdd:PHA02639  22 CDKPDdISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNNAiWSNKAPFCMLKECNDPPSIINGKIYNKRE 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 169 TFKVKDRVQYTCTAG---YYTATGkqTEEVEC-QAHGWSFTPQCNKLMCSSLRLIENGYFH--PVKQTYEEGDVVQFFCH 242
Cdd:PHA02639 102 MYKVGDEIYYVCNEHkgvQYSLVG--NEKITCiQDKSWKPDPPICKMINCRFPALQNGYINgiPSNKKFYYKTRVGFSCK 179

                        170       180
                 ....*....|....*....|....*.
gi 149058463 243 ENYYLSGSDLIQC-YNFGWYPESPIC 267
Cdd:PHA02639 180 SGFDLVGEKYSTCnINATWFPSIPTC 205
Sushi pfam00084
Sushi repeat (SCR repeat);
334-388 3.46e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 44.41  E-value: 3.46e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463  334 CKPPPVIANGaVVDDLLASYTTGSSVEYRCNEYYLLKGSQTSLCEQ-GTWSSP-PVC 388
Cdd:pfam00084   1 CPPPPDIPNG-KVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEdGTWSPPfPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 462-516 1.02e-05

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 43.28  E-value: 1.02e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463   462 CASPPVIRNGNIVSlVASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:smart00032   1 CPPPPDIENGTVTS-SSGTYSYGDTVTYSCDPGYTLIGSSTITCLeNGTWSpPPPTC 56
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 28-126 1.62e-05

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 46.95  E-value: 1.62e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  28 PAVENGRiaqyYYTFKSYYFPMSIdkkLSFFCLAGYAT--ESGkqeekIRCTAEGWSPKPRC-YKKCLKPVLRNGYVSDG 104
Cdd:PHA02927 152 PSISNGR----HNGYEDFYTDGSV---VTYSCNSGYSLigNSG-----VLCSGGEWSDPPTCqIVKCPHPTISNGYLSSG 219

                         90       100
                 ....*....|....*....|...
gi 149058463 105 -KVLYKIQENMRYGCTSGYKTTG 126
Cdd:PHA02927 220 fKRSYSYNDNVDFKCKYGYKLSG 242
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 94-147 1.06e-03

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 37.44  E-value: 1.06e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 149058463  94 PVLRNGYVSDGKVLYKIQENMRYGCTSGYKTTGgkdEEVVQCLSEG-WS-SQPSCR 147
Cdd:cd00033    5 PVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVG---SSTITCTENGgWSpPPPTCE 57
PHA02817 PHA02817
EEV Host range protein; Provisional
 272-404 1.27e-03

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 40.69  E-value: 1.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463 272 NRCPPPPVPLNSKVEPHSTTYRHGEVVHIECELN-----FAIQGSDALVCE-NGKWT-EPPKCveNIENCKPPpVIANGA 344
Cdd:PHA02817  22 NKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEkDGKWNkEFPVC--KIIRCRFP-ALQNGF 98

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149058463 345 V--VDDLLASYTTgSSVEYRCNEYYLLKGSQTSLCE-QGTW-SSPPVCLE-PCTIDVHHMNRNNI 404
Cdd:PHA02817  99 VngIPDSKKFYYE-SEVSFSCKPGFVLIGTKYSVCGiNSSWiPKVPICSRdNITYNKIYINKVNI 162
PHA02817 PHA02817
EEV Host range protein; Provisional
 89-184 2.80e-03

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 39.54  E-value: 2.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149058463  89 KKCLKPVLRNGYVSDGKVLYKIQENMRYGCtsGYKTTGGK----DEEVVQCLSEG-WSSQPScRKEQETCLAPELHHGNY 163
Cdd:PHA02817  23 KCCYPPSIKNGYIYNKKTEYNIGSNVTFFC--GNNTRGVRytlvGEKNIICEKDGkWNKEFP-VCKIIRCRFPALQNGFV 99

                         90       100
                 ....*....|....*....|...
gi 149058463 164 STI--QRTFKVKDRVQYTCTAGY 184
Cdd:PHA02817 100 NGIpdSKKFYYESEVSFSCKPGF 122
Sushi pfam00084
Sushi repeat (SCR repeat);
462-516 3.07e-03

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 36.32  E-value: 3.07e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149058463  462 CASPPVIRNGNIVSLvASTYENGSSVEYQCFDSHFLQGSRDAYCV-DGVWT-TPPSC 516
Cdd:pfam00084   1 CPPPPDIPNGKVSAT-KNEYNYGASVSYECDPGYRLVGSPTITCQeDGTWSpPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 156-208 4.69e-03

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 35.52  E-value: 4.69e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 149058463 156 PELHHGNYSTIQRTFKVKDRVQYTCTAGYYTatgKQTEEVECQAHG-WSFT-PQC 208
Cdd:cd00033    5 PVPENGTVTGSKGSYSYGSTVTYSCNEGYTL---VGSSTITCTENGgWSPPpPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 94-146 7.53e-03

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 35.19  E-value: 7.53e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 149058463    94 PVLRNGYVSDGKVLYKIQENMRYGCTSGYKTTGGkdeEVVQCLSEG-WS-SQPSC 146
Cdd:smart00032   5 PDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGS---STITCLENGtWSpPPPTC 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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