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Conserved domains on  [gi|149067613|gb|EDM17165|]
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inositol polyphosphate-5-phosphatase F (predicted), isoform CRA_b [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
hSac2 super family cl13842
Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 ...
 3-69 7.13e-15

Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with pfam02383. hSac2 functions as an inositol polyphosphate 5-phosphatase.


The actual alignment was detected with superfamily member pfam12456:

Pssm-ID: 463592  Cd Length: 115  Bit Score: 70.70  E-value: 7.13e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149067613    3 LTDAAHRDV-------DVLLLLSNSAYYVAYYDDEVDKVSQYQRRSLEDLEKIEIGP------EPTLFGKPKFSCMRLHY 69
Cdd:pfam12456  35 LLSPDHWNTlrslpeeERVLLLTDKALYICKYDFNLEKVVQFERVPLNDIDRIQLGTyitstlSLAQRDERRNYGLRIHY 114
 
Name Accession Description Interval E-value
hSac2 pfam12456
Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 ...
 3-69 7.13e-15

Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with pfam02383. hSac2 functions as an inositol polyphosphate 5-phosphatase.


Pssm-ID: 463592  Cd Length: 115  Bit Score: 70.70  E-value: 7.13e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149067613    3 LTDAAHRDV-------DVLLLLSNSAYYVAYYDDEVDKVSQYQRRSLEDLEKIEIGP------EPTLFGKPKFSCMRLHY 69
Cdd:pfam12456  35 LLSPDHWNTlrslpeeERVLLLTDKALYICKYDFNLEKVVQFERVPLNDIDRIQLGTyitstlSLAQRDERRNYGLRIHY 114
 
Name Accession Description Interval E-value
hSac2 pfam12456
Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 ...
 3-69 7.13e-15

Inositol phosphatase; This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with pfam02383. hSac2 functions as an inositol polyphosphate 5-phosphatase.


Pssm-ID: 463592  Cd Length: 115  Bit Score: 70.70  E-value: 7.13e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149067613    3 LTDAAHRDV-------DVLLLLSNSAYYVAYYDDEVDKVSQYQRRSLEDLEKIEIGP------EPTLFGKPKFSCMRLHY 69
Cdd:pfam12456  35 LLSPDHWNTlrslpeeERVLLLTDKALYICKYDFNLEKVVQFERVPLNDIDRIQLGTyitstlSLAQRDERRNYGLRIHY 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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