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Conserved domains on  [gi|256732413|gb|EEU45762|]
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predicted protein [Fusarium vanettenii 77-13-4]

Protein Classification

uS14 family ribosomal protein( domain architecture ID 10446592)

uS14 family ribosomal protein similar to Homo sapiens mitochondrial 28S ribosomal protein S14 and Saccharomyces cerevisiae mitochondrial 37S ribosomal protein MRP2

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 59-112 8.67e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


:

Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.22  E-value: 8.67e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 256732413   59 QLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRAS 112
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
 
Name Accession Description Interval E-value
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 59-112 8.67e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.22  E-value: 8.67e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 256732413   59 QLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRAS 112
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 21-113 1.13e-20

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 79.42  E-value: 1.13e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256732413  21 RDHTKRKVFEQHETERQALRYIIRNTTLPPRVRAEAQLQLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEA 100
Cdd:PRK08881   9 REKKRKKLVAKYAAKRAELKAIISDPNLSDEERYEARLKLQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELA 88

                         90
                 ....*....|...
gi 256732413 101 MAGNIPGVKRASW 113
Cdd:PRK08881  89 HRGEIPGVVKASW 101
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 68-113 6.16e-13

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 58.48  E-value: 6.16e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 256732413  68 RPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRASW 113
Cdd:COG0199   15 KPVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
 
Name Accession Description Interval E-value
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 59-112 8.67e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 78.22  E-value: 8.67e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 256732413   59 QLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRAS 112
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 21-113 1.13e-20

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 79.42  E-value: 1.13e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256732413  21 RDHTKRKVFEQHETERQALRYIIRNTTLPPRVRAEAQLQLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEA 100
Cdd:PRK08881   9 REKKRKKLVAKYAAKRAELKAIISDPNLSDEERYEARLKLQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELA 88

                         90
                 ....*....|...
gi 256732413 101 MAGNIPGVKRASW 113
Cdd:PRK08881  89 HRGEIPGVVKASW 101
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 68-113 6.16e-13

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 58.48  E-value: 6.16e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 256732413  68 RPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRASW 113
Cdd:COG0199   15 KPVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
rps14 CHL00074
ribosomal protein S14
 25-113 5.51e-08

ribosomal protein S14


Pssm-ID: 214354  Cd Length: 100  Bit Score: 46.72  E-value: 5.51e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256732413  25 KRKVFEQ-HETERQALRYIIRNTTLPpRVRAEAQLQLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAG 103
Cdd:CHL00074  12 KRQKLVQkYHLKRRSLKKEIKKVSSL-SEKWEIHGKLQSLPRNSAPTRLHNRCFLTGRPRGNYRDFGLSRHVLREMAHAC 90

                         90
                 ....*....|
gi 256732413 104 NIPGVKRASW 113
Cdd:CHL00074  91 LLPGVTKSSW 100
rpsN PRK08061
type Z 30S ribosomal protein S14;
69-113 1.85e-07

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 44.48  E-value: 1.85e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 256732413  69 PTQIRNRCIMGGQGRGVLSDFKMTRYNFRMEAMAGNIPGVKRASW 113
Cdd:PRK08061  17 KVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
rpsN PRK06911
30S ribosomal protein S14; Reviewed
 20-113 2.18e-07

30S ribosomal protein S14; Reviewed


Pssm-ID: 180742 [Multi-domain]  Cd Length: 100  Bit Score: 45.44  E-value: 2.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256732413  20 LRDHTKRKVFEQHETERQALRYIIRNTTlPPRVRAEAQLQLTQMHCYTRPTQIRNRCIMGGQGRGVLSDFKMTRYNFRME 99
Cdd:PRK06911   8 MRESKRAKLVEKYRQRRNELKQLIKSSD-DFQVIMESQAKLAKLPVNSNPVRYVTRCKQCGRPHAVYRKFNLCRICLRQQ 86

                         90
                 ....*....|....
gi 256732413 100 AMAGNIPGVKRASW 113
Cdd:PRK06911  87 LMVGNIPGGRKSSW 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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