NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|261301851|gb|EEY05348|]
View 

gamma-glutamyl phosphate reductase [Brucella neotomae 5K33]

Protein Classification

glutamate-5-semialdehyde dehydrogenase( domain architecture ID 10791829)

glutamate-5-semialdehyde dehydrogenase catalyzes the NADPH-dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate in the L-proline biosynthetic pathway (PBP)

CATH:  3.40.605.10
EC:  1.2.1.41
Gene Symbol:  proA
Gene Ontology:  GO:0004350|GO:0050661|GO:0055129
PubMed:  6337636|26443591
SCOP:  4000806

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
proA PRK00197
gamma-glutamyl phosphate reductase; Provisional
9-426 0e+00

gamma-glutamyl phosphate reductase; Provisional


:

Pssm-ID: 234685  Cd Length: 417  Bit Score: 694.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   9 DIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAI 88
Cdd:PRK00197   1 DIMEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  89 AEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIH 168
Cdd:PRK00197  81 AEGLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 169 KALVKGLEAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADL 248
Cdd:PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLK-LDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADL 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 249 DMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIIS 328
Cdd:PRK00197 240 DKALKIVLNAKTQRPSVCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILA 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 329 VALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGV 408
Cdd:PRK00197 320 VKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGL 399
                        410
                 ....*....|....*...
gi 261301851 409 EQLTSFKYRVRGSGQVRG 426
Cdd:PRK00197 400 EELTTYKYIVLGDGQIRA 417
 
Name Accession Description Interval E-value
proA PRK00197
gamma-glutamyl phosphate reductase; Provisional
9-426 0e+00

gamma-glutamyl phosphate reductase; Provisional


Pssm-ID: 234685  Cd Length: 417  Bit Score: 694.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   9 DIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAI 88
Cdd:PRK00197   1 DIMEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  89 AEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIH 168
Cdd:PRK00197  81 AEGLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 169 KALVKGLEAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADL 248
Cdd:PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLK-LDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADL 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 249 DMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIIS 328
Cdd:PRK00197 240 DKALKIVLNAKTQRPSVCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILA 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 329 VALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGV 408
Cdd:PRK00197 320 VKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGL 399
                        410
                 ....*....|....*...
gi 261301851 409 EQLTSFKYRVRGSGQVRG 426
Cdd:PRK00197 400 EELTTYKYIVLGDGQIRA 417
ProA COG0014
Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]; Gamma-glutamyl ...
14-426 0e+00

Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]; Gamma-glutamyl phosphate reductase is part of the Pathway/BioSystem: Proline biosynthesis


Pssm-ID: 439785  Cd Length: 414  Bit Score: 690.20  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  14 MAEVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIR 93
Cdd:COG0014    3 LEELGKRARAASRALATLSTAQKNAALLAMADALEANADEILAANAKDLEAARENGLSEALLDRLKLTEERIEAMAEGLR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  94 AIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVK 173
Cdd:COG0014   83 QVAALPDPVGEVLDGWTRPNGLQIGRVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQE 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 174 GLEAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARR 253
Cdd:COG0014  163 ALEEAGLPEDAVQLVPTTDREAVGELLT-LDGYIDVIIPRGGAGLIRRVVENATVPVIEHGDGNCHVYVDASADLEMAVD 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 254 IALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVD 333
Cdd:COG0014  242 IVVNAKTQRPGVCNALETLLVHRDIAAEFLPRLAAALAEAGVELRGDERTRAILPDVKPATEEDWGTEYLDLILAVKVVD 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 334 GISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTS 413
Cdd:COG0014  322 SLDEAIAHINRYGSGHTEAIVTEDYAAARRFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTT 401
                        410
                 ....*....|...
gi 261301851 414 FKYRVRGSGQVRG 426
Cdd:COG0014  402 YKYVVRGDGQIRP 414
ALDH_F18-19_ProA-GPR cd07079
Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19; ...
16-421 0e+00

Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19; Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).


Pssm-ID: 143398  Cd Length: 406  Bit Score: 619.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  16 EVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAI 95
Cdd:cd07079    2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  96 ATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGL 175
Cdd:cd07079   82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 176 EAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIA 255
Cdd:cd07079  162 EEAGLPEDAVQLIPDTDREAVQELLK-LDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 256 LDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGI 335
Cdd:cd07079  241 VNAKTQRPSVCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 336 SGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFK 415
Cdd:cd07079  321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400

                 ....*.
gi 261301851 416 YRVRGS 421
Cdd:cd07079  401 YIVRGD 406
proA TIGR00407
gamma-glutamyl phosphate reductase; The related model TIGR01092 describes a full-length fusion ...
21-415 1.24e-137

gamma-glutamyl phosphate reductase; The related model TIGR01092 describes a full-length fusion protein delta l-pyrroline-5-carboxylate synthetase that includes a gamma-glutamyl phosphate reductase region as described by this model. Alternate name: glutamate-5-semialdehyde dehydrogenase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 161862  Cd Length: 398  Bit Score: 399.93  E-value: 1.24e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   21 AKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPD 100
Cdd:TIGR00407   1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  101 PVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAANL 180
Cdd:TIGR00407  81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  181 PADAIQIVPVTDRAAVGEMLkGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKM 260
Cdd:TIGR00407 161 PVGAVQLIETPSRELVSELL-DLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKT 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  261 RRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKP----ATEEDWSTEYLDAIISVALVDGIS 336
Cdd:TIGR00407 240 QRPSTCNAIETLLVNKAIAREFLPVLENQLLEKGVTIHADAYALKLLELGPAteaiVCKTDFDKEFLSLDLSVKIVESLE 319
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 261301851  337 GAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFK 415
Cdd:TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398
Aldedh pfam00171
Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. ...
53-284 7.20e-08

Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.


Pssm-ID: 425500 [Multi-domain]  Cd Length: 459  Bit Score: 54.46  E-value: 7.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   53 DILEANRLDLANAEK--NGMaasfvdrlTLNEAR--IDAIAEGIRAIATLPD-PVGEVIAEwdrPNGLHIERVRTPLGVI 127
Cdd:pfam00171  62 DLLEERKDELAELETleNGK--------PLAEARgeVDRAIDVLRYYAGLARrLDGETLPS---DPGRLAYTRREPLGVV 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  128 GVI--YESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKAlvkgLEAANLPADAIQIVPVTDRAAVGEMLKGLGg 205
Cdd:pfam00171 131 GAItpWNFPLLLPAWKIAPALAAGNTVVLKPSELTPLTALLLAEL----FEEAGLPAGVLNVVTGSGAEVGEALVEHPD- 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  206 aIDVIVPRGGKS---LVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDRAVAST 281
Cdd:pfam00171 206 -VRKVSFTGSTAvgrHIAEAAAQNLKRVTLELGGKNPLIVLEDADLDAAVEAAVFGAFGNAGqVCTATSRLLVHESIYDE 284

                  ...
gi 261301851  282 HLA 284
Cdd:pfam00171 285 FVE 287
 
Name Accession Description Interval E-value
proA PRK00197
gamma-glutamyl phosphate reductase; Provisional
9-426 0e+00

gamma-glutamyl phosphate reductase; Provisional


Pssm-ID: 234685  Cd Length: 417  Bit Score: 694.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   9 DIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAI 88
Cdd:PRK00197   1 DIMEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  89 AEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIH 168
Cdd:PRK00197  81 AEGLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 169 KALVKGLEAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADL 248
Cdd:PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLK-LDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADL 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 249 DMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIIS 328
Cdd:PRK00197 240 DKALKIVLNAKTQRPSVCNALETLLVHEAIAEEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILA 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 329 VALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGV 408
Cdd:PRK00197 320 VKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGL 399
                        410
                 ....*....|....*...
gi 261301851 409 EQLTSFKYRVRGSGQVRG 426
Cdd:PRK00197 400 EELTTYKYIVLGDGQIRA 417
ProA COG0014
Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]; Gamma-glutamyl ...
14-426 0e+00

Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]; Gamma-glutamyl phosphate reductase is part of the Pathway/BioSystem: Proline biosynthesis


Pssm-ID: 439785  Cd Length: 414  Bit Score: 690.20  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  14 MAEVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIR 93
Cdd:COG0014    3 LEELGKRARAASRALATLSTAQKNAALLAMADALEANADEILAANAKDLEAARENGLSEALLDRLKLTEERIEAMAEGLR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  94 AIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVK 173
Cdd:COG0014   83 QVAALPDPVGEVLDGWTRPNGLQIGRVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQE 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 174 GLEAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARR 253
Cdd:COG0014  163 ALEEAGLPEDAVQLVPTTDREAVGELLT-LDGYIDVIIPRGGAGLIRRVVENATVPVIEHGDGNCHVYVDASADLEMAVD 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 254 IALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVD 333
Cdd:COG0014  242 IVVNAKTQRPGVCNALETLLVHRDIAAEFLPRLAAALAEAGVELRGDERTRAILPDVKPATEEDWGTEYLDLILAVKVVD 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 334 GISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTS 413
Cdd:COG0014  322 SLDEAIAHINRYGSGHTEAIVTEDYAAARRFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTT 401
                        410
                 ....*....|...
gi 261301851 414 FKYRVRGSGQVRG 426
Cdd:COG0014  402 YKYVVRGDGQIRP 414
ALDH_F18-19_ProA-GPR cd07079
Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19; ...
16-421 0e+00

Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19; Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).


Pssm-ID: 143398  Cd Length: 406  Bit Score: 619.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  16 EVGRKAKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAI 95
Cdd:cd07079    2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  96 ATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGL 175
Cdd:cd07079   82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 176 EAANLPADAIQIVPVTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIA 255
Cdd:cd07079  162 EEAGLPEDAVQLIPDTDREAVQELLK-LDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 256 LDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGI 335
Cdd:cd07079  241 VNAKTQRPSVCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 336 SGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFK 415
Cdd:cd07079  321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400

                 ....*.
gi 261301851 416 YRVRGS 421
Cdd:cd07079  401 YIVRGD 406
proA TIGR00407
gamma-glutamyl phosphate reductase; The related model TIGR01092 describes a full-length fusion ...
21-415 1.24e-137

gamma-glutamyl phosphate reductase; The related model TIGR01092 describes a full-length fusion protein delta l-pyrroline-5-carboxylate synthetase that includes a gamma-glutamyl phosphate reductase region as described by this model. Alternate name: glutamate-5-semialdehyde dehydrogenase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 161862  Cd Length: 398  Bit Score: 399.93  E-value: 1.24e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   21 AKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPD 100
Cdd:TIGR00407   1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  101 PVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAANL 180
Cdd:TIGR00407  81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  181 PADAIQIVPVTDRAAVGEMLkGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKM 260
Cdd:TIGR00407 161 PVGAVQLIETPSRELVSELL-DLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKT 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  261 RRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKP----ATEEDWSTEYLDAIISVALVDGIS 336
Cdd:TIGR00407 240 QRPSTCNAIETLLVNKAIAREFLPVLENQLLEKGVTIHADAYALKLLELGPAteaiVCKTDFDKEFLSLDLSVKIVESLE 319
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 261301851  337 GAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFK 415
Cdd:TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398
PLN02418 PLN02418
delta-1-pyrroline-5-carboxylate synthase
54-424 1.06e-105

delta-1-pyrroline-5-carboxylate synthase


Pssm-ID: 215230  Cd Length: 718  Bit Score: 328.22  E-value: 1.06e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  54 ILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYES 133
Cdd:PLN02418 336 IKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFES 415
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 134 RPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALvkgleaanlpADAIQ-------IVPVTDRAAVGEMLKgLGGA 206
Cdd:PLN02418 416 RPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVI----------TDAIPktvggklIGLVTSRDEIPDLLK-LDDV 484
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 207 IDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTGICGAAETLLVDRA-VASTHLAP 285
Cdd:PLN02418 485 IDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKDlVQNGGLND 564
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 286 ILGDLAAGGCEIRGSAEVLALYpaAKPATEEdWSTEYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFF 365
Cdd:PLN02418 565 LLVALRSAGVTLYGGPRASKLL--NIPEAQS-FHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFL 641
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 261301851 366 NEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQV 424
Cdd:PLN02418 642 RQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQV 700
P5CS TIGR01092
delta l-pyrroline-5-carboxylate synthetase; This protein contains a glutamate 5-kinase (ProB, ...
2-424 2.62e-98

delta l-pyrroline-5-carboxylate synthetase; This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 130164 [Multi-domain]  Cd Length: 715  Bit Score: 309.15  E-value: 2.62e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851    2 VKADMTKDIAQVMAEVGRKakaaaapLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNGMAASFVDRLTLN 81
Cdd:TIGR01092 283 VEQTGERDMAVAARESSRM-------LQALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLSMS 355
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   82 EARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSA 161
Cdd:TIGR01092 356 PSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAA 435
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  162 HSSAAIHKALVKGLeAANLPADAIQIVpvTDRAAVGEMLKgLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLY 241
Cdd:TIGR01092 436 RSNAILHKVITEAI-PIHVGKKLIGLV--TSREEIPDLLK-LDDVIDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVY 511
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  242 IDKSADLDMARRIALDAKMRRTGICGAAETLLVDRAVAST-HLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEdWST 320
Cdd:TIGR01092 512 VDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLLRNgLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKS-FRT 590
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  321 EYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKM 400
Cdd:TIGR01092 591 EYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRI 670
                         410       420
                  ....*....|....*....|....
gi 261301851  401 HARGPVGVEQLTSFKYRVRGSGQV 424
Cdd:TIGR01092 671 HARGPVGVEGLLTTRWLLRGKGQV 694
ALDH-like cd07077
NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family; The aldehyde ...
21-419 3.47e-44

NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family; The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.


Pssm-ID: 143396 [Multi-domain]  Cd Length: 397  Bit Score: 158.54  E-value: 3.47e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  21 AKAAAAPLSIATSEQKNKALNAAAAAILEARADILEANRLDLANAEKNgMAASFVDRLTLNEARIDAIAEGIRAIatlPD 100
Cdd:cd07077    3 AKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGI---TA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 101 PVGEVIAEWdRPNGLHIERVRTPLGVIGVIYESRPNVTA-DAGALCLKAGNAVILRGGSDSAHSSAAIHkALVKGLEAAN 179
Cdd:cd07077   79 SVGHIQDVL-LPDNGETYVRAFPIGVTMHILPSTNPLSGiTSALRGIATRNQCIFRPHPSAPFTNRALA-LLFQAADAAH 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 180 LPADAIQIVPVTDRAAVGEMLKGLGgaIDVIVPRGGKSLVARVQSEAR-VPVFAHLEGICHLYIDKSADLDMARRIALDA 258
Cdd:cd07077  157 GPKILVLYVPHPSDELAEELLSHPK--IDLIVATGGRDAVDAAVKHSPhIPVIGFGAGNSPVVVDETADEERASGSVHDS 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 259 KMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIrgSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGISG- 337
Cdd:cd07077  235 KFFDQNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKV--PQETKPLSKETTPSFDDEALESMTPLECQFRVLDVISAv 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 338 --AIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARG-PVGVEQLTSF 414
Cdd:cd07077  313 enAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGaGVGHDALRPL 392

                 ....*
gi 261301851 415 KYRVR 419
Cdd:cd07077  393 KRLVR 397
ALDH-SF cd06534
NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily ...
53-385 1.79e-20

NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.


Pssm-ID: 143395 [Multi-domain]  Cd Length: 367  Bit Score: 92.29  E-value: 1.79e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  53 DILEANRLDLANAEkngmaaSFVDRLTLNEAR--IDAIAEGIRAIA-TLPDPVGEVIAEWDRPNGLHIERVrtPLGVIGV 129
Cdd:cd06534   27 DLLEERREELAALE------TLETGKPIEEALgeVARAIDTFRYAAgLADKLGGPELPSPDPGGEAYVRRE--PLGVVGV 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 130 IYESRP--NVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKAlvkgLEAANLPADAIQIVPvTDRAAVGEMLKGLGGaI 207
Cdd:cd06534   99 ITPWNFplLLAAWKLAPALAAGNTVVLKPSELTPLTALALAEL----LQEAGLPPGVVNVVP-GGGDEVGAALLSHPR-V 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 208 DVIVPRGGKSLVARVQSEA---RVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDRAVAS--- 280
Cdd:cd06534  173 DKISFTGSTAVGKAIMKAAaenLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGqICTAASRLLVHESIYDefv 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 281 THLAPILGDLAaggceirgsaevlalyPAAKPATEedwstEYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQT 360
Cdd:cd06534  253 EKLVTVLVDVD----------------PDMPIAQE-----EIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNR 311
                        330       340
                 ....*....|....*....|....*
gi 261301851 361 VARFFNEIDSAILLHNASTQFADGG 385
Cdd:cd06534  312 ALRVAERLRAGTVYINDSSIGVGPE 336
AdhE COG1012
Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and ...
53-279 3.85e-10

Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and metabolism]; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase is part of the Pathway/BioSystem: Proline degradation


Pssm-ID: 440636 [Multi-domain]  Cd Length: 479  Bit Score: 61.68  E-value: 3.85e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  53 DILEANRLDLANAE--KNGMaasfvdrlTLNEARIDaIAEGIRAI---ATLPDPV-GEVIAEwDRPNGLHIERvRTPLGV 126
Cdd:COG1012   76 DLLEERREELAALLtlETGK--------PLAEARGE-VDRAADFLryyAGEARRLyGETIPS-DAPGTRAYVR-REPLGV 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 127 IGVI----YesrP-NVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKAlvkgLEAANLPADAIQIVPvTDRAAVGEMLK 201
Cdd:COG1012  145 VGAItpwnF---PlALAAWKLAPALAAGNTVVLKPAEQTPLSALLLAEL----LEEAGLPAGVLNVVT-GDGSEVGAALV 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 202 GLGGaIDVIV----PRGGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDR 276
Cdd:COG1012  217 AHPD-VDKISftgsTAVGR-RIAAAAAENLKRVTLELGGKNPAIVLDDADLDAAVEAAVRGAFGNAGqRCTAASRLLVHE 294

                 ...
gi 261301851 277 AVA 279
Cdd:COG1012  295 SIY 297
ALDH cd07078
NAD(P)+ dependent aldehyde dehydrogenase family; The aldehyde dehydrogenase family (ALDH) of ...
53-279 5.00e-09

NAD(P)+ dependent aldehyde dehydrogenase family; The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group.


Pssm-ID: 143397 [Multi-domain]  Cd Length: 432  Bit Score: 57.99  E-value: 5.00e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  53 DILEANRLDLANAEkngmaaSFVDRLTLNEAR--IDAIAEGIR-AIATLPDPVGEVIAEwdRPNGLHIERVRTPLGVIGV 129
Cdd:cd07078   31 DLLEERREELAALE------TLETGKPIEEALgeVARAADTFRyYAGLARRLHGEVIPS--PDPGELAIVRREPLGVVGA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 130 IyeSRPN----VTADAGALCLKAGNAVILRGGSDSAHSSAaihkALVKGLEAANLPADAIQIVPVtDRAAVGEMLKGLGG 205
Cdd:cd07078  103 I--TPWNfpllLAAWKLAPALAAGNTVVLKPSELTPLTAL----LLAELLAEAGLPPGVLNVVTG-DGDEVGAALASHPR 175
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 261301851 206 aIDVIV----PRGGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDRAVA 279
Cdd:cd07078  176 -VDKISftgsTAVGK-AIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGqVCTAASRLLVHESIY 252
ALDH_F20_ACDH cd07122
Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Coenzyme A acylating ...
123-279 4.29e-08

Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.


Pssm-ID: 143440 [Multi-domain]  Cd Length: 436  Bit Score: 54.80  E-value: 4.29e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 123 PLGVI-GVIYESRPNVTADAGAL-CLKAGNAVILrggsdSAH-----SSAAIHKALVKGLEAANLPADAIQIVPVTDRAA 195
Cdd:cd07122   95 PVGVIaALIPSTNPTSTAIFKALiALKTRNAIIF-----SPHprakkCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIEL 169
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 196 VGEMLKGLGgaIDVIVPRGGKSLVARVQSEAR---------VPVfahlegichlYIDKSADLDMArriALDAKMRRT--- 263
Cdd:cd07122  170 TQELMKHPD--VDLILATGGPGMVKAAYSSGKpaigvgpgnVPA----------YIDETADIKRA---VKDIILSKTfdn 234
                        170
                 ....*....|....*..
gi 261301851 264 G-ICGAAETLLVDRAVA 279
Cdd:cd07122  235 GtICASEQSVIVDDEIY 251
Aldedh pfam00171
Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. ...
53-284 7.20e-08

Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.


Pssm-ID: 425500 [Multi-domain]  Cd Length: 459  Bit Score: 54.46  E-value: 7.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851   53 DILEANRLDLANAEK--NGMaasfvdrlTLNEAR--IDAIAEGIRAIATLPD-PVGEVIAEwdrPNGLHIERVRTPLGVI 127
Cdd:pfam00171  62 DLLEERKDELAELETleNGK--------PLAEARgeVDRAIDVLRYYAGLARrLDGETLPS---DPGRLAYTRREPLGVV 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  128 GVI--YESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKAlvkgLEAANLPADAIQIVPVTDRAAVGEMLKGLGg 205
Cdd:pfam00171 131 GAItpWNFPLLLPAWKIAPALAAGNTVVLKPSELTPLTALLLAEL----FEEAGLPAGVLNVVTGSGAEVGEALVEHPD- 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  206 aIDVIVPRGGKS---LVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDRAVAST 281
Cdd:pfam00171 206 -VRKVSFTGSTAvgrHIAEAAAQNLKRVTLELGGKNPLIVLEDADLDAAVEAAVFGAFGNAGqVCTATSRLLVHESIYDE 284

                  ...
gi 261301851  282 HLA 284
Cdd:pfam00171 285 FVE 287
PTZ00381 PTZ00381
aldehyde dehydrogenase family protein; Provisional
121-280 4.47e-07

aldehyde dehydrogenase family protein; Provisional


Pssm-ID: 240392  Cd Length: 493  Bit Score: 51.95  E-value: 4.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 121 RTPLGVIGVI----YESRPNVTADAGALClkAGNAVILRGGSDSAHSSAAIHKALVKgleaaNLPADAIQIVPvTDRAAV 196
Cdd:PTZ00381 107 PEPLGVVLVIgawnYPLNLTLIPLAGAIA--AGNTVVLKPSELSPHTSKLMAKLLTK-----YLDPSYVRVIE-GGVEVT 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 197 GEMLKGlggAIDVIV----PRGGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDM-ARRIALdAKMRRTG-ICGAAE 270
Cdd:PTZ00381 179 TELLKE---PFDHIFftgsPRVGK-LVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVaARRIAW-GKFLNAGqTCVAPD 253
                        170
                 ....*....|
gi 261301851 271 TLLVDRAVAS 280
Cdd:PTZ00381 254 YVLVHRSIKD 263
ALDH_F14-YMR110C cd07135
Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins; Aldehyde ...
116-279 1.05e-06

Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins; Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.


Pssm-ID: 143453 [Multi-domain]  Cd Length: 436  Bit Score: 50.68  E-value: 1.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 116 HIERVrtPLGVIGVI----YESRPNVTADAGALClkAGNAVILRGgSDSAHSSAAIHKALVKgleaANLPADAIQIVpvt 191
Cdd:cd07135  103 RIRKE--PLGVVLIIgpwnYPVLLALSPLVGAIA--AGCTVVLKP-SELTPHTAALLAELVP----KYLDPDAFQVV--- 170
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 192 dRAAVGEMLKGLGGAIDVIV----PRGGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDM-ARRIALdAKMRRTG-I 265
Cdd:cd07135  171 -QGGVPETTALLEQKFDKIFytgsGRVGR-IIAEAAAKHLTPVTLELGGKSPVIVTKNADLELaAKRILW-GKFGNAGqI 247
                        170
                 ....*....|....
gi 261301851 266 CGAAETLLVDRAVA 279
Cdd:cd07135  248 CVAPDYVLVDPSVY 261
ALDH_F7_AASADH-like cd07086
NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins; ALDH ...
103-279 2.90e-06

NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins; ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).


Pssm-ID: 143405 [Multi-domain]  Cd Length: 478  Bit Score: 49.48  E-value: 2.90e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 103 GEVIAEwDRPNGLHIERvRTPLGVIGVIyeSRPN----VTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAA 178
Cdd:cd07086  115 GLTIPS-ERPGHRLMEQ-WNPLGVVGVI--TAFNfpvaVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKN 190
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 179 NLPADAIQIvpVTDRAAVGEMLKGLGGaIDVIVPRG----GKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRI 254
Cdd:cd07086  191 GLPPGVVNL--VTGGGDGGELLVHDPR-VPLVSFTGstevGR-RVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRA 266
                        170       180
                 ....*....|....*....|....*.
gi 261301851 255 ALDAKMRRTGI-CGAAETLLVDRAVA 279
Cdd:cd07086  267 VLFAAVGTAGQrCTTTRRLIVHESVY 292
ALDH_F15-22 cd07098
Aldehyde dehydrogenase family 15A1 and 22A1-like; Aldehyde dehydrogenase family members ...
88-293 1.13e-05

Aldehyde dehydrogenase family 15A1 and 22A1-like; Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.


Pssm-ID: 143416 [Multi-domain]  Cd Length: 465  Bit Score: 47.29  E-value: 1.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  88 IAEGIRAIATLPDPVGevIAEWDRPNGLHIErvrtPLGVIGVI----YesrP--NVTADAGAlCLKAGNAVILRGGSDSA 161
Cdd:cd07098   91 LKHGEKALRPESRPGG--LLMFYKRARVEYE----PLGVVGAIvswnY---PfhNLLGPIIA-ALFAGNAIVVKVSEQVA 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 162 HSSAAIHKALVKGLEAANLPADAIQIVPVTdrAAVGEMLKGlGGAIDVIV----PRGGKsLVARVQSEARVPVFAHLEGI 237
Cdd:cd07098  161 WSSGFFLSIIRECLAACGHDPDLVQLVTCL--PETAEALTS-HPVIDHITfigsPPVGK-KVMAAAAESLTPVVLELGGK 236
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 261301851 238 CHLYIDKSADLDMARRIALDAKMRRTGI-CGAAETLLVDRAVASThLAPILGDLAAG 293
Cdd:cd07098  237 DPAIVLDDADLDQIASIIMRGTFQSSGQnCIGIERVIVHEKIYDK-LLEILTDRVQA 292
ALDH_F3-13-14_CALDH-like cd07087
ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other ...
120-279 7.78e-05

ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins; ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.


Pssm-ID: 143406 [Multi-domain]  Cd Length: 426  Bit Score: 44.82  E-value: 7.78e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 120 VRTPLGVIGVI----YesrPNVTADA---GALClkAGNAVILRGGSDSAHSSAAIHKALVKGLeaanlPADAIQIVPVTD 192
Cdd:cd07087   97 IPEPLGVVLIIgpwnY---PLQLALApliGAIA--AGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGV 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 193 RAAVgEMLKGlggAIDVIV----PRGGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLD-MARRIALdAKMRRTG-IC 266
Cdd:cd07087  167 EVAT-ALLAE---PFDHIFftgsPAVGK-IVMEAAAKHLTPVTLELGGKSPCIVDKDANLEvAARRIAW-GKFLNAGqTC 240
                        170
                 ....*....|...
gi 261301851 267 GAAETLLVDRAVA 279
Cdd:cd07087  241 IAPDYVLVHESIK 253
ALDH_HBenzADH cd07151
NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like; NADP+-dependent, ...
82-198 1.27e-03

NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like; NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.


Pssm-ID: 143469 [Multi-domain]  Cd Length: 465  Bit Score: 40.75  E-value: 1.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  82 EARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHieRV-RTPLGVIGVIyesRP-----NVTADAGALCLKAGNAVILR 155
Cdd:cd07151   90 NIEWGAAMAITREAATFPLRMEGRILPSDVPGKEN--RVyREPLGVVGVI---SPwnfplHLSMRSVAPALALGNAVVLK 164
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 261301851 156 GGSDSAHSSAAIhkaLVKGLEAANLPADAIQIVpVTDRAAVGE 198
Cdd:cd07151  165 PASDTPITGGLL---LAKIFEEAGLPKGVLNVV-VGAGSEIGD 203
ALDH_KGSADH-YcbD cd07097
Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like; ...
79-278 1.33e-03

Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like; Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.


Pssm-ID: 143415 [Multi-domain]  Cd Length: 473  Bit Score: 40.70  E-value: 1.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  79 TLNEARidaiAEGIRAIATLPDPVGEVI------AEWDRPnGLHIERVRTPLGVIGVI-----------YESRPnvtada 141
Cdd:cd07097   90 TLPEAR----GEVTRAGQIFRYYAGEALrlsgetLPSTRP-GVEVETTREPLGVVGLItpwnfpiaipaWKIAP------ 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 142 gALClkAGNAVILRGGSDSAHSSAaihkALVKGLEAANLPADAIQIVpVTDRAAVGEMLKGlGGAIDVI-----VPRGGK 216
Cdd:cd07097  159 -ALA--YGNTVVFKPAELTPASAW----ALVEILEEAGLPAGVFNLV-MGSGSEVGQALVE-HPDVDAVsftgsTAVGRR 229
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 261301851 217 SLVARVQSEARVpvfaHLE--GICHLYIDKSADLDMARRIALDAKMRRTG-ICGAAETLLVDRAV 278
Cdd:cd07097  230 IAAAAAARGARV----QLEmgGKNPLVVLDDADLDLAVECAVQGAFFSTGqRCTASSRLIVTEGI 290
ALDH_F20_ACDH_EutE-like cd07081
Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and ...
106-398 1.47e-03

Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins; Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.


Pssm-ID: 143400 [Multi-domain]  Cd Length: 439  Bit Score: 40.71  E-value: 1.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 106 IAEWDRPNGLHIERvrTPLGVI-GVIYESRPNVTADAGAL-CLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAANLPAD 183
Cdd:cd07081   80 VLTGDENGGTLIIA--EPIGVVaSITPSTNPTSTVIFKSLiSLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPEN 157
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 184 AIQIVPVTDRAAVGEMLKGLGgaIDVIVPRGGKSLVARVQSEARvPVFAHLEGICHLYIDKSADLDMA-RRIALDAKMRR 262
Cdd:cd07081  158 LIGWIDNPSIELAQRLMKFPG--IGLLLATGGPAVVKAAYSSGK-PAIGVGAGNTPVVIDETADIKRAvQSIVKSKTFDN 234
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 263 TGICGAAETLLVDRAVA-------STHLAPIL---------------GDL-------------AAGGCEIRGSAEVLaLY 307
Cdd:cd07081  235 GVICASEQSVIVVDSVYdevmrlfEGQGAYKLtaeelqqvqpvilknGDVnrdivgqdaykiaAAAGLKVPQETRIL-IG 313
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 308 PAAKPATEEDWSTEYLDAIISVALVDGISGAIDH----INRYSSHHTEAIVAEDAQTVAR---FFNEIDSAILLHNASTQ 380
Cdd:cd07081  314 EVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKalalKLEGGCGHTSAMYSDNIKAIENmnqFANAMKTSRFVKNGPCS 393
                        330       340
                 ....*....|....*....|.
gi 261301851 381 FA---DGGEFGMGAEIGIATG 398
Cdd:cd07081  394 QGglgDLYNFRGWPSMTLGCG 414
ALDH_SaliADH cd07105
Salicylaldehyde dehydrogenase, DoxF-like; Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2. ...
53-279 1.69e-03

Salicylaldehyde dehydrogenase, DoxF-like; Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.


Pssm-ID: 143423 [Multi-domain]  Cd Length: 432  Bit Score: 40.64  E-value: 1.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  53 DILEANRLDLANAEKN--GMAASFVdrltlnEARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIErVRTPLGVI--- 127
Cdd:cd07105   33 DLLESRRDEFIEAMMEetGATAAWA------GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMV-VKEPVGVVlgi 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 128 -----GVIYESRpnvtadAGALCLKAGNAVILRGGSDSAHSsaaiHKALVKGLEAANLPADAIQIVPV--TDRAAVGEML 200
Cdd:cd07105  106 apwnaPVILGTR------AIAYPLAAGNTVVLKASELSPRT----HWLIGRVFHEAGLPKGVLNVVTHspEDAPEVVEAL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 201 KGLG--------GAIDVivprgGKsLVARVQSEARVPVFAHLEGICHLYIDKSADLDMA-RRIALDAKMRRTGICGAAET 271
Cdd:cd07105  176 IAHPavrkvnftGSTRV-----GR-IIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAaNAALFGAFLNSGQICMSTER 249

                 ....*...
gi 261301851 272 LLVDRAVA 279
Cdd:cd07105  250 IIVHESIA 257
ALDH_SSADH2_GabD2 cd07101
Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like; Succinate-semialdehyde ...
121-279 1.82e-03

Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like; Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).


Pssm-ID: 143419 [Multi-domain]  Cd Length: 454  Bit Score: 40.37  E-value: 1.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 121 RTPLGVIGVI----YesrPNVTADAGAL-CLKAGNAVILRGGSDSAHSSAAIHKAlvkgLEAANLPADAIQIvpVTDRAA 195
Cdd:cd07101  116 RRPKGVVGVIspwnY---PLTLAVSDAIpALLAGNAVVLKPDSQTALTALWAVEL----LIEAGLPRDLWQV--VTGPGS 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 196 VgemlkgLGGAI----DVIVPRG----GKSlVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTG-IC 266
Cdd:cd07101  187 E------VGGAIvdnaDYVMFTGstatGRV-VAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGqLC 259
                        170
                 ....*....|...
gi 261301851 267 GAAETLLVDRAVA 279
Cdd:cd07101  260 VSIERIYVHESVY 272
ALDH_BenzADH-like cd07104
ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, ...
85-200 4.19e-03

ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins; ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.


Pssm-ID: 143422 [Multi-domain]  Cd Length: 431  Bit Score: 39.05  E-value: 4.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  85 IDAIAEGIRAIATLP-DPVGEVIAEwDRPNGLHIERvRTPLGVIGVIyeSRPNV----TADAGALCLKAGNAVILRGGSD 159
Cdd:cd07104   61 VGAAIAILREAAGLPrRPEGEILPS-DVPGKESMVR-RVPLGVVGVI--SPFNFplilAMRSVAPALALGNAVVLKPDSR 136
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 261301851 160 SAHSSAAIhkaLVKGLEAANLPADAIQIVPvTDRAAVGEML 200
Cdd:cd07104  137 TPVTGGLL---IAEIFEEAGLPKGVLNVVP-GGGSEIGDAL 173
ALDH_VaniDH_like cd07150
Pseudomonas putida vanillin dehydrogenase-like; Vanillin dehydrogenase (Vdh, VaniDH) involved ...
92-278 4.56e-03

Pseudomonas putida vanillin dehydrogenase-like; Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.


Pssm-ID: 143468 [Multi-domain]  Cd Length: 451  Bit Score: 39.24  E-value: 4.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  92 IRAIATLP-DPVGEVIAEwDRPnGLHIERVRTPLGVIGVIyeSRPNV----TADAGALCLKAGNAVILRGGSDSAHSSAA 166
Cdd:cd07150   89 LRAAAGECrRVRGETLPS-DSP-GTVSMSVRRPLGVVAGI--TPFNYplilATKKVAFALAAGNTVVLKPSEETPVIGLK 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 167 IHKAlvkgLEAANLPADAIQIVPVTdRAAVGEMLkglggaidVIVPRggkslVARVQSEARVPVFAHLEGICH------- 239
Cdd:cd07150  165 IAEI----MEEAGLPKGVFNVVTGG-GAEVGDEL--------VDDPR-----VRMVTFTGSTAVGREIAEKAGrhlkkit 226
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 261301851 240 --------LYIDKSADLDMARRIAL-DAKMRRTGICGAAETLLVDRAV 278
Cdd:cd07150  227 lelggknpLIVLADADLDYAVRAAAfGAFMHQGQICMSASRIIVEEPV 274
ALDH_F3FHI cd07137
Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins; Aldehyde ...
98-290 6.83e-03

Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins; Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.


Pssm-ID: 143455 [Multi-domain]  Cd Length: 432  Bit Score: 38.55  E-value: 6.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851  98 LPDPVGE--VIAEWDRPNGLHIErvrtPlgVIGVIyesrpnvtadagalclKAGNAVILRGGSDSAHSSAAIHKALVKGL 175
Cdd:cd07137   98 VSEPLGVvlVISAWNFPFLLSLE----P--VIGAI----------------AAGNAVVLKPSELAPATSALLAKLIPEYL 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261301851 176 EAanlpaDAIQIVpvTDRAAVGEMLkgLGGAIDVIVPRGGkSLVARVQSEAR----VPVFAHLEGICHLYIDKSADLDMA 251
Cdd:cd07137  156 DT-----KAIKVI--EGGVPETTAL--LEQKWDKIFFTGS-PRVGRIIMAAAakhlTPVTLELGGKCPVIVDSTVDLKVA 225
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 261301851 252 -RRIALDakmrRTGICGAAETLLVDRAVASTHLAPILGDL 290
Cdd:cd07137  226 vRRIAGG----KWGCNNGQACIAPDYVLVEESFAPTLIDA 261
gabD2 PRK09407
succinic semialdehyde dehydrogenase; Reviewed
120-189 9.40e-03

succinic semialdehyde dehydrogenase; Reviewed


Pssm-ID: 236501 [Multi-domain]  Cd Length: 524  Bit Score: 38.32  E-value: 9.40e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 261301851 120 VRTPLGVIGVI----YesrPNVTADAGAL-CLKAGNAVILRGGSDSAHSSAAihkaLVKGLEAANLPADAIQIVP 189
Cdd:PRK09407 151 LRQPKGVVGVIspwnY---PLTLAVSDAIpALLAGNAVVLKPDSQTPLTALA----AVELLYEAGLPRDLWQVVT 218
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH