|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
4-475 |
0e+00 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 619.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 4 MDSATQATTPTegPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLL 83
Cdd:PRK11049 1 VDQVKVVADDQ--APAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 84 SNLAYKSFADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGE 163
Cdd:PRK11049 79 SNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 164 MEFWFAMIKIVTIIALILVGGYLAITGFQPPrSGVpAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAE 243
Cdd:PRK11049 159 MEFWFAMIKIVAIVALIVVGLVMVAMHFQSP-TGV-EASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 244 TADPEHNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFS 323
Cdd:PRK11049 237 TKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 324 TSRILYGLAREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKY 403
Cdd:PRK11049 317 TSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIGAFTLVTTVSAILFMFVWTIILCSYLVY 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314927087 404 LGKHPQRHAESAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARADHTR 475
Cdd:PRK11049 397 RKQRPHLHEKSIYKMPLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAELR 468
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
12-471 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 603.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 12 TPTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSF 91
Cdd:COG1113 2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 92 ADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMI 171
Cdd:COG1113 82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 172 KIVTIIALILVGGYLAITGFQPPrsGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNL 251
Cdd:COG1113 162 KVVAIVAFIVVGLLLIFFGFGLP--GGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 252 PKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGL 331
Cdd:COG1113 240 PKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 332 AREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSvmDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRH 411
Cdd:COG1113 320 AERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPE--KAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREG 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 314927087 412 AE-SAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARA 471
Cdd:COG1113 398 AAaLKFKMPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
22-467 |
9.40e-92 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 286.77 E-value: 9.40e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 22 QLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGP 101
Cdd:TIGR01773 9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 102 GAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALIL 181
Cdd:TIGR01773 89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 182 VgGYLAITGFQPPRSgvpAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPAR 261
Cdd:TIGR01773 169 L-GAVAIFGFAPGSE---VSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 262 VLIFYVLTLGVIMAVQPWDLIN-PQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPPV 340
Cdd:TIGR01773 245 IIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 341 FAKLSSRHIPRNALIL-TAMCIAPAIVLVTLEDSVmdaFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMP 419
Cdd:TIGR01773 325 FMKLNKKGVPVQAVLAsTFFSFLTVVVNYFAPDKV---FLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMW 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 314927087 420 AGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLA 467
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFA 449
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
31-443 |
1.38e-91 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 286.91 E-value: 1.38e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 31 HLQLIAIGGAIGTGLFLGSGKTISLAGP-SILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGPGAGFYMGW 109
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 110 TYWMCWVVIGNADTIAMCGYLAAWFPHLD---KWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALILVGgyl 186
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWELVPDipyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVG--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 187 AITGFQPPRSgvPAASFSHLWDRGG--FFPTGFM-GFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPARVL 263
Cdd:pfam00324 158 IILLSGGNPN--DGAIFRYLGDNGGknNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRIT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 264 IFYVLTLGVIMAVQPWD------LINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDA 337
Cdd:pfam00324 236 IFYILSLLAIGLLVPWNdpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 338 PPVFAKLSSRHIPRNALILTamCIAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKY---LGKHPQRHAES 414
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVS--MVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFrkaFKYQGRSIDEL 393
|
410 420
....*....|....*....|....*....
gi 314927087 415 AFKMPAGRVMSWVGILFFITILIMLGFSA 443
Cdd:pfam00324 394 PFKAPLGPLGVILGLAAIIIILIIQFLYA 422
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
4-475 |
0e+00 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 619.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 4 MDSATQATTPTegPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLL 83
Cdd:PRK11049 1 VDQVKVVADDQ--APAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 84 SNLAYKSFADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGE 163
Cdd:PRK11049 79 SNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 164 MEFWFAMIKIVTIIALILVGGYLAITGFQPPrSGVpAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAE 243
Cdd:PRK11049 159 MEFWFAMIKIVAIVALIVVGLVMVAMHFQSP-TGV-EASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 244 TADPEHNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFS 323
Cdd:PRK11049 237 TKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 324 TSRILYGLAREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKY 403
Cdd:PRK11049 317 TSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIGAFTLVTTVSAILFMFVWTIILCSYLVY 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314927087 404 LGKHPQRHAESAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARADHTR 475
Cdd:PRK11049 397 RKQRPHLHEKSIYKMPLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAELR 468
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
12-471 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 603.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 12 TPTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSF 91
Cdd:COG1113 2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 92 ADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMI 171
Cdd:COG1113 82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 172 KIVTIIALILVGGYLAITGFQPPrsGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNL 251
Cdd:COG1113 162 KVVAIVAFIVVGLLLIFFGFGLP--GGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 252 PKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGL 331
Cdd:COG1113 240 PKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 332 AREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSvmDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRH 411
Cdd:COG1113 320 AERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPE--KAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREG 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 314927087 412 AE-SAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARA 471
Cdd:COG1113 398 AAaLKFKMPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
|
|
| LysP |
COG0833 |
Amino acid permease [Amino acid transport and metabolism]; |
14-465 |
1.43e-121 |
|
Amino acid permease [Amino acid transport and metabolism];
Pssm-ID: 440595 [Multi-domain] Cd Length: 467 Bit Score: 364.11 E-value: 1.43e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 14 TEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGP-SILLVYLIIGAVLFFVMRAMGELLlsnlAYK--- 89
Cdd:COG0833 1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELA----VAMpvs 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 90 -SFADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWF 168
Cdd:COG0833 77 gSFQTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 169 AMIKIVTIIALILVGGyLAITGFqpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPE 248
Cdd:COG0833 157 SLIKVITVIAFIIVGL-LMIFGI----IGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 249 HNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRIL 328
Cdd:COG0833 232 KTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRML 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 329 YGLAREKDAPPVFAKLSSRHIPRNALILTaMCIAPAIVLVTL--EDSVMDAFSLVAGVSSVLylsVWGLILVCYLKY--- 403
Cdd:COG0833 312 WSLAKEGMAPKIFAKLNKRGVPLNALLAT-MAVGLLALLSSFfgAGTVYLWLLSISGLTGFI---AWLGIAISHYRFrra 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314927087 404 LGKHPQRHAESAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRL 465
Cdd:COG0833 388 YVAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKL 449
|
|
| PRK10238 |
PRK10238 |
aromatic amino acid transporter AroP; |
15-463 |
1.78e-107 |
|
aromatic amino acid transporter AroP;
Pssm-ID: 182324 [Multi-domain] Cd Length: 456 Bit Score: 327.68 E-value: 1.78e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 15 EGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADF 94
Cdd:PRK10238 2 EGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 95 ATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIV 174
Cdd:PRK10238 82 AYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 175 TIIALILVGGYLAITGfqpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKA 254
Cdd:PRK10238 162 AVVAMIIFGGWLLFSG-----NGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 255 INSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLARE 334
Cdd:PRK10238 237 TNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 335 KDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLedSVMDAFSLV-AGVSSVLYLSvWGLILVCYLKYLGKHPQRHAE 413
Cdd:PRK10238 317 GNAPKALASVDKRGVPVNTILVSALVTALCVLINYL--APESAFGLLmALVVSALVIN-WAMISLAHMKFRRAKQEQGVV 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 314927087 414 SAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLY 463
Cdd:PRK10238 394 TRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGY 443
|
|
| PRK10249 |
PRK10249 |
phenylalanine transporter; Provisional |
11-466 |
1.39e-105 |
|
phenylalanine transporter; Provisional
Pssm-ID: 236667 Cd Length: 458 Bit Score: 322.71 E-value: 1.39e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 11 TTPTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKS 90
Cdd:PRK10249 7 VSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 91 FADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAM 170
Cdd:PRK10249 87 FAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 171 IKIVTIIALILVGGYLAITGfqpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHN 250
Cdd:PRK10249 167 IKVLAIIGMIGFGLWLLFSG-----HGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 251 LPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYG 330
Cdd:PRK10249 242 IPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 331 LAREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSvmDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQR 410
Cdd:PRK10249 322 LSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQ--KAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQ 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 314927087 411 HAESAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLL 466
Cdd:PRK10249 400 GRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTL 455
|
|
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
19-465 |
1.84e-101 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 312.14 E-value: 1.84e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 19 EEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDL 98
Cdd:PRK10580 3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQEN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 99 VGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIA 178
Cdd:PRK10580 83 LGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIII 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 179 LILVGGYLAITGFQpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSI 258
Cdd:PRK10580 163 MIVAGIGIIIWGIG---NGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 259 PARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAP 338
Cdd:PRK10580 240 PMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 339 PVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSvmDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAES-AFK 417
Cdd:PRK10580 320 KIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPE--NVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKAlKFK 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 314927087 418 MPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRL 465
Cdd:PRK10580 398 VPGGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMF 445
|
|
| PRK10746 |
PRK10746 |
putative transport protein YifK; Provisional |
20-475 |
1.49e-95 |
|
putative transport protein YifK; Provisional
Pssm-ID: 182694 Cd Length: 461 Bit Score: 297.11 E-value: 1.49e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 20 EPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLV 99
Cdd:PRK10746 5 KPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 100 GPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIAL 179
Cdd:PRK10746 85 SPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVM 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 180 ILVGGYLAITGFQpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIP 259
Cdd:PRK10746 165 IVIGLGVIFFGFG---NGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 260 ARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPP 339
Cdd:PRK10746 242 WRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 340 VFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMP 419
Cdd:PRK10746 322 AMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSI 401
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 314927087 420 AGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARADHTR 475
Cdd:PRK10746 402 LFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKVFGLNRHGKAH 457
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
22-467 |
9.40e-92 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 286.77 E-value: 9.40e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 22 QLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGP 101
Cdd:TIGR01773 9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 102 GAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALIL 181
Cdd:TIGR01773 89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 182 VgGYLAITGFQPPRSgvpAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPAR 261
Cdd:TIGR01773 169 L-GAVAIFGFAPGSE---VSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 262 VLIFYVLTLGVIMAVQPWDLIN-PQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPPV 340
Cdd:TIGR01773 245 IIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 341 FAKLSSRHIPRNALIL-TAMCIAPAIVLVTLEDSVmdaFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMP 419
Cdd:TIGR01773 325 FMKLNKKGVPVQAVLAsTFFSFLTVVVNYFAPDKV---FLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMW 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 314927087 420 AGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVLYRLLA 467
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFA 449
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
31-443 |
1.38e-91 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 286.91 E-value: 1.38e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 31 HLQLIAIGGAIGTGLFLGSGKTISLAGP-SILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGPGAGFYMGW 109
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 110 TYWMCWVVIGNADTIAMCGYLAAWFPHLD---KWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALILVGgyl 186
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWELVPDipyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVG--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 187 AITGFQPPRSgvPAASFSHLWDRGG--FFPTGFM-GFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPARVL 263
Cdd:pfam00324 158 IILLSGGNPN--DGAIFRYLGDNGGknNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRIT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 264 IFYVLTLGVIMAVQPWD------LINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDA 337
Cdd:pfam00324 236 IFYILSLLAIGLLVPWNdpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 338 PPVFAKLSSRHIPRNALILTamCIAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKY---LGKHPQRHAES 414
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVS--MVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFrkaFKYQGRSIDEL 393
|
410 420
....*....|....*....|....*....
gi 314927087 415 AFKMPAGRVMSWVGILFFITILIMLGFSA 443
Cdd:pfam00324 394 PFKAPLGPLGVILGLAAIIIILIIQFLYA 422
|
|
| PRK15049 |
PRK15049 |
L-asparagine permease; |
20-461 |
3.08e-82 |
|
L-asparagine permease;
Pssm-ID: 185009 Cd Length: 499 Bit Score: 263.79 E-value: 3.08e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 20 EPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLV 99
Cdd:PRK15049 23 EEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 100 GPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAW--FPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTII 177
Cdd:PRK15049 103 GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 178 ALILVGGYLAITGfqPPRSGvPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINS 257
Cdd:PRK15049 183 TFLVVGTVFLGSG--QPLDG-NTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINS 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 258 IPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDA 337
Cdd:PRK15049 260 VIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 338 PPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSvmDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQ-RHAESAF 416
Cdd:PRK15049 340 PSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPS--RVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEgKAADVSF 417
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 314927087 417 KMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMV 461
Cdd:PRK15049 418 KLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLV 462
|
|
| PRK10836 |
PRK10836 |
lysine transporter; Provisional |
18-357 |
3.47e-77 |
|
lysine transporter; Provisional
Pssm-ID: 182767 Cd Length: 489 Bit Score: 250.12 E-value: 3.47e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 18 TEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPS-ILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFAT 96
Cdd:PRK10836 8 TEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 97 DLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTI 176
Cdd:PRK10836 88 NYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 177 IALILVgGYLAITGFQppRSGVPAAsfSHLWDRG-GFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAI 255
Cdd:PRK10836 168 IVFIIV-GVLMIIGIF--KGAEPAG--WSNWTIGdAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 256 NSIPARVLIFYVLTLGVIMAVQPW--------DLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRI 327
Cdd:PRK10836 243 RQVFWRILLFYVFAILIISLIIPYtdpsllrnDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRM 322
|
330 340 350
....*....|....*....|....*....|
gi 314927087 328 LYGLAREKDAPPVFAKLSSRHIPRNALILT 357
Cdd:PRK10836 323 LYTLACDGKAPRIFAKLSRGGVPRNALYAT 352
|
|
| 2A0310 |
TIGR00913 |
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines] |
24-463 |
1.72e-76 |
|
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334 Cd Length: 478 Bit Score: 247.97 E-value: 1.72e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 24 QRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGP-SILLVYLIIGAVLFFVMRAMGEL-LLSNLAYKSFADFATDLVGP 101
Cdd:TIGR00913 1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMaTFYPVVSGSFATYASRFVDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 102 GAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALIL 181
Cdd:TIGR00913 81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 182 VGGYLaITGFQPPRSGVPAasfsHLWD-----RGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAIN 256
Cdd:TIGR00913 161 LSIIL-NCGGGPNHGYIGF----RYWHdpgafAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 257 SIPARVLIFYVLTLGVIMAVQPWD---------LINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRI 327
Cdd:TIGR00913 236 RTFWRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRT 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 328 LYGLAREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTleDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKY---L 404
Cdd:TIGR00913 316 LYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVS--KKEAEVFTWLLNISGLSGFFTWMCICLSHIRFrkaM 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 314927087 405 GKHPQRHAESAFKMPAGRVMSWVGILFFITILIMLGFSA-----DSRQALIAAPVWVIFMMVLY 463
Cdd:TIGR00913 394 KAQGRSLDELPYKSQTGPYGSYYALFFNILILIAQGYVAfapvkFSAKSFFEAYLSLPIFIALY 457
|
|
| PRK11387 |
PRK11387 |
S-methylmethionine permease; |
13-449 |
2.56e-69 |
|
S-methylmethionine permease;
Pssm-ID: 236904 Cd Length: 471 Bit Score: 228.97 E-value: 2.56e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 13 PTEGPTEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPS-ILLVYLIIGAVLFFVMRAMGELLLSNLAYKSF 91
Cdd:PRK11387 2 PEPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 92 ADFATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMI 171
Cdd:PRK11387 82 HVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 172 KIVTIIALILVGGyLAITGFQPPRSGVPAASFSHLwDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNL 251
Cdd:PRK11387 162 KVVTILAFIVLGG-AAIFGFIPMQDGSPAPGLRNL-TAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 252 PKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGL 331
Cdd:PRK11387 240 PVAIRTTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 332 AREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVL-VTLEDSVMDAFSLVAGVSSVlylSVWGLILVCYLKYLGKHPQR 410
Cdd:PRK11387 320 SNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSsVVAPDTVFVALSAISGFAVV---AVWLSICASHFMFRRRHLRD 396
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 314927087 411 H---AESAFKMPAGRVMSWVGILFFITILIMLGFSADSRQAL 449
Cdd:PRK11387 397 GkalSELAYRAPWYPLTPILGFVLCLLACVGLAFDPSQRIAL 438
|
|
| PRK10197 |
PRK10197 |
GABA permease; |
34-451 |
3.75e-57 |
|
GABA permease;
Pssm-ID: 182297 Cd Length: 446 Bit Score: 196.38 E-value: 3.75e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 34 LIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELLLSNLAYKSFADFATDLVGPGAGFYMGWTYWM 113
Cdd:PRK10197 1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 114 CWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALILVGGyLAITGFQP 193
Cdd:PRK10197 81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGA-VAISGFYP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 194 PrsgVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPARVLIFYVLTLGVI 273
Cdd:PRK10197 160 Y---AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 274 MAVQPWDLINPQA-SPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAPPVFAKLSSRHIPRN 352
Cdd:PRK10197 237 VALIPWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 353 ALILTAMciAPAIVLVTLEDSVMDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHAESAFKMPAGRVMSWVGILFF 432
Cdd:PRK10197 317 AVLLSTG--AAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFI 394
|
410
....*....|....*....
gi 314927087 433 ITILIMLGFSADSRQALIA 451
Cdd:PRK10197 395 TFVLVVMLFRPAQQLEVIS 413
|
|
| PotE |
COG0531 |
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; |
18-475 |
4.43e-52 |
|
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain] Cd Length: 438 Bit Score: 182.40 E-value: 4.43e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 18 TEEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAVLFFVMRAMGELllsNLAYK---SFADF 94
Cdd:COG0531 4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAEL---ASAFPragGAYTY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 95 ATDLVGPGAGFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIV 174
Cdd:COG0531 81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 175 TIIALILVGGYlaitgfqpprsGVPAASFSHLWDrggfFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKA 254
Cdd:COG0531 161 VLLLFIVVGLF-----------AFDPANFTPFLP----AGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 255 INSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLARE 334
Cdd:COG0531 226 IILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARD 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 335 KDAPPVFAKLSSRH-IPRNALILTAMCIAPAIVLvtledsVMDAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPqrHAE 413
Cdd:COG0531 306 GLLPKVFAKVHPRFgTPVNAILLTGVIALLLLLL------GAASFTALASLASVGVLLAYLLVALAVIVLRRRRP--DLP 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314927087 414 SAFKMPaGRVMSWVGILFFITILIMLGFsadsrQALIAAPVWVIFMMVLYRLLASARADHTR 475
Cdd:COG0531 378 RPFRVP-LPLIPILGILLCLFLLYLLGP-----GALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
|
|
| AA_permease_2 |
pfam13520 |
Amino acid permease; |
35-462 |
9.48e-28 |
|
Amino acid permease;
Pssm-ID: 404414 [Multi-domain] Cd Length: 427 Bit Score: 115.10 E-value: 9.48e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 35 IAIGGAIGTGLFLGSGktISLAGPSILLVYLIIGAVLFFVMRamgeLLLSNLAYKSFAD-----FATDLVGPGAGFYMGW 109
Cdd:pfam13520 9 LVIGSVIGSGIFVAPL--VASGGPALIVWGWIAAIIFSLAVG----LVYAELSSALPRSggiyvYLENAFGKFVAFLAGW 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 110 TYWMCWVVIGNADTIAMCGYLA-AWFPHLDKWIP-----ATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALILVG 183
Cdd:pfam13520 83 SNWFAYVLGLASSASVAASYLLsALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIIL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 184 GYLAITGFQPPRSGVPAASFshlwdrggfFPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPehNLPKAINSIPARVL 263
Cdd:pfam13520 163 GLVTADGGGFNLLSGEWHTF---------FPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIGVIIVG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 264 IFYVLTLGVIMAVQPWD---LINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKDAP-- 338
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDeiaLSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfs 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 339 PVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSVMDAfslVAGVSSVLYLSVWGLILVCYLKYLGKHPQRHaesafKM 418
Cdd:pfam13520 312 RFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNA---LLSLSAYGYLLSYLLPIIGLLILRKKRPDLG-----RI 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 314927087 419 PAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIFMMVL 462
Cdd:pfam13520 384 PGRWPVAIFGILFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
|
|
| 2A0303 |
TIGR00906 |
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ... |
19-382 |
4.92e-20 |
|
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain] Cd Length: 557 Bit Score: 92.96 E-value: 4.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 19 EEPQLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTI-SLAGPSILLVYLIIGAVLffvmramgelLLSNLAYKSFA----- 92
Cdd:TIGR00906 22 EESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVArNDSGPAIVLSFLISGLAA----------VLSGFCYAEFGarvpk 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 93 ---DFATDLVGPGA--GFYMGWTYWMCWVVIGNADTIAMCGYLAAWFPH-LDKW-----------------IPATCIVLL 149
Cdd:TIGR00906 92 agsAYLYSYVTVGElwAFITGWNLILEYVIGTAAVARSWSAYFDELLNKqIGQFrrtyfklnydglaeypdFFAVCLILL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 150 LTCLNMVAVKLFGEMEFWFAMIKIVtIIALILVGGYLaitgfqppRSGVPAASFSHLWDRGGFFPTGFMGFIAGFQIAIF 229
Cdd:TIGR00906 172 LAVLLSFGVKESAWVNKIFTAINIL-VLLFVIIAGFT--------KADVANWSITEEKGAGGFMPYGFTGVLSGAATCFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 230 SFQGIEMAGTAAAETADPEHNLPKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQaSPFVEMFSFIGILIAFHIVNFVV 309
Cdd:TIGR00906 243 AFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 310 LTSAASSANSGVFSTSRILYGLAREKDAPPVFAKLSSR-HIPRNALIlTAMCIAPAIVLVT--------LEDSVMDAFSL 380
Cdd:TIGR00906 322 LCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKtKTPINATV-VSGAIAALMAFLFdlkalvdlLSIGTLLAYSL 400
|
..
gi 314927087 381 VA 382
Cdd:TIGR00906 401 VA 402
|
|
| 2A0308 |
TIGR00911 |
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ... |
35-442 |
6.60e-12 |
|
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain] Cd Length: 501 Bit Score: 67.46 E-value: 6.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 35 IAIGGAIGTGLFLGSGKTISLAG-PSILLVYLIIGAVLffvmRAMGELLLSNLAY---KSFADFA--TDLVGPGAGFYmg 108
Cdd:TIGR00911 52 IIVGTIIGSGIFVSPKGVLKNAGsVGLALIMWAVCGIF----SIVGALVYAELGTtipKSGGEYNyiLEVFGPLLAFL-- 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 109 wTYWMCWVVIGNADTIAMCGYLAAWF----------PHLDKWIPATCIVLLLTCLNMVAVKLFGEMEFWFAMIKIvTIIA 178
Cdd:TIGR00911 126 -RLWIELLVIRPGSQAVNALNFAIYIltpvfpdcevPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKL-LALL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 179 LILVGGYLAITGFQpprsgvpaasFSHLWDRGGF--FPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAIN 256
Cdd:TIGR00911 204 LIIITGWVQLGKGG----------VESLNPKNAFegTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 257 SIPARVLIFYVLT-LGVIMAVQPWDLINPQASPfVEMFSFIGILIAFHIVNFVVLtSAASSANSGVFSTSRILYGLAREK 335
Cdd:TIGR00911 274 ISMPIVTFIYVLTnIAYFTVLSPEELLASLAVA-VDFGERLLGVMSWAMPALVGL-SCFGSVNGSLFSSSRLFFVGGREG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 336 DAPPVFAKLSS-RHIPRNALILTamCIAPAIVLVTledsvMDAFSLVAGVSSVLYLSVwGLIlVCYLKYLgKHPQRHAES 414
Cdd:TIGR00911 352 HLPSLLSMIHVkRLTPLPSLLIV--CTLTLLMLFS-----GDIYSLINLISFANWLFN-ALA-VAGLLWL-RYKRPEMNR 421
|
410 420
....*....|....*....|....*...
gi 314927087 415 AFKMPAgrvmsWVGILFFITILIMLGFS 442
Cdd:TIGR00911 422 PIKVPL-----FFPVFFLLSCLFLIILS 444
|
|
| PRK10644 |
PRK10644 |
arginine/agmatine antiporter; |
34-390 |
1.56e-11 |
|
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain] Cd Length: 445 Bit Score: 66.35 E-value: 1.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 34 LIAIGGAIGTGLFLGSGKTISLAGPSIL-LVYLIIGAV-LFFVMRAMGELLLSnlAYKSFAdFATDLVGPGAGFYMGWTY 111
Cdd:PRK10644 17 LMVAGNIMGSGVFLLPANLASTGGIAIYgWLVTIIGALgLSMVYAKMSSLDPS--PGGSYA-YARRCFGPFLGYQTNVLY 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 112 WM-CWvvIGN-ADTIAMCGYLAAWFPHLDKWI--PATCIVLL--LTCLNMVAVKLFGEMEfwfamiKIVTIIALILVGGy 185
Cdd:PRK10644 94 WLaCW--IGNiAMVVIGVGYLSYFFPILKDPLvlTITCVVVLwiFVLLNIVGPKMITRVQ------AVATVLALIPIVG- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 186 LAITGFqpprSGVPAASFSHLWDRGGFFPTGFMGFIAGFqiAIFSFQGIEMAGTAAAETADPEHNLPKAINSIPARVLIF 265
Cdd:PRK10644 165 IAVFGW----FWFRGETYMAAWNVSGLGTFGAIQSTLNV--TLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVC 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 266 YVLTLGVIMAVQPWDLINPQASPF---------------VEMFSFIGILIAFHIVNFVVLTSAASSANSGVFstsrilyg 330
Cdd:PRK10644 239 YVLSSTAIMGMIPNAALRVSASPFgdaarmalgdtagaiVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLF-------- 310
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 331 larekdaPPVFAKLSSRHIPRNALILTAMcIAPAIVLVTLEDSVMDAFSLVAGVSSVLYL 390
Cdd:PRK10644 311 -------PPIFARVNKAGTPVAGLLIVGV-LMTIFQLSSISPNASKEFGLVSSVSVIFTL 362
|
|
| 2A0302 |
TIGR00905 |
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ... |
32-458 |
2.89e-11 |
|
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 129983 Cd Length: 473 Bit Score: 65.46 E-value: 2.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 32 LQLIA--IGGAIGTGLFLGSGKTISLAGPSILLVYLIIGAV----LFFVMRAMGELLlSNLAYKSFAdFATDLVGPGAGF 105
Cdd:TIGR00905 12 FALTAlvIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVgmlaLAFVFAILATKK-PELDGGIYA-YAREGFGPYIGF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 106 YMGWTYWMCwVVIGN-ADTIAMCGYLAAWFPH---LDKW---IPATCIVLLLTCLNMVAVKlfgemefWFAMIKIVTIIA 178
Cdd:TIGR00905 90 MSGWGYWLS-AWIGNvAYAVLLFSALGYFFPLfgsGNPVpsiLGASVLLWVFTFLVLRGVR-------QAAFINTITTIA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 179 LILVGGYLAITGFQPPRSGVPAASFshlWDRGGFFPTGFMGFIAG-FQIAIFSFQGIEMAgTAAAETADPEHNLPKAINS 257
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADF---WGHDVPSLGSVFSQVKNtMLVTLWVFIGIEGA-VVSSGRAKNKSDVGKATVL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 258 IPARVLIFYVLTLGVIMAVQPWD-LINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSANSGVFSTSRILYGLAREKD 336
Cdd:TIGR00905 238 GTLGALVIYILITLLSLGVLPQQeLANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 337 APPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLedsVMDAFSLVAGVSSVlylsvwgLILVCYL---KYLGKHPQRHAE 413
Cdd:TIGR00905 318 FPKIFGRVNKNGAPSVALLLTNILIQLFLLLTLL---TSSAYNVLVSLAVV-------MILVPYLlsaAYLLKLAKVGTY 387
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 314927087 414 SAFKMPAGRVMSWVGILFFITILIMLGFSADSRQALIAAPVWVIF 458
Cdd:TIGR00905 388 PKIKNRKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFY 432
|
|
| frlA |
PRK11357 |
amino acid permease; |
22-472 |
3.38e-10 |
|
amino acid permease;
Pssm-ID: 183096 [Multi-domain] Cd Length: 445 Bit Score: 62.18 E-value: 3.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 22 QLQRGLKNRHLQLIAIGGAIGTGLFLGSGKTISLAGPSILLV--YLIIGAVLFFVMRAMGELllsNLAYKSFADFATDLV 99
Cdd:PRK11357 5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVlaFVIGGLIVIPQMCVYAEL---STAYPENGADYVYLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 100 GPGAGFYMGWTYWMCW-------VVIGNADTIAMCGYLAAWFPHLDKWIpATCIVLLLTCLNMVAVKLFGEMEFWFAMIK 172
Cdd:PRK11357 82 NAGSRPLAFLSGWASFwandapsLSIMALAIVSNLGFLTPIDPLLGKFI-AAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 173 IVTIIALILVGGYLAITG-FQPPRSGVPAASfshlwdrggffpTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNL 251
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAEnFAAPTTTAIGAT------------GSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTM 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 252 PKAINSIPARVLIFYVLTLGVIMAVQPWDLINPQASPFVEMFSFIGIL--IAFHIVNFVVLTSAASSANSGVFSTSRILY 329
Cdd:PRK11357 229 PRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALgsTAGIFVAITAMIVILGSLSSCVMYQPRLEY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 330 GLAREKDAPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDSVMDAFSLVAGVSSVLylsVWGLILVCYLKylgkhpq 409
Cdd:PRK11357 309 AMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTL---TFGSIIWCRKR------- 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 314927087 410 RHAESAFKMPAGRVMSWVGILFFItILIMLGFSADSRQALIAAPVWVIFMMVLYRLLASARAD 472
Cdd:PRK11357 379 DDYKPLWRTPAFGLMTTLAIASSL-ILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQ 440
|
|
| 2A0304 |
TIGR00907 |
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ... |
146-410 |
1.93e-04 |
|
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain] Cd Length: 482 Bit Score: 43.97 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 146 IVLLLTCLNMVAVKLFGEMEFWFAMIKIVTIIALILV-------GGYLAITGFQPprsgvpaasfshlwDRGGFFPTGFm 218
Cdd:TIGR00907 153 IHALINSLPTKWLPRITSSAAYWSLLGFLTICITLLAckspkfnDGKFVFTNFNN--------------STGGWKPGGF- 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 219 GFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLPKAI-NSIPARVLIFYVLTLGVIMAVQ-PWDLIN-PQASPFVEMFS- 294
Cdd:TIGR00907 218 AFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIiGAVAIGIVTGFCFNIVLFFSMGdIDSLISsTTGQPIAQIFYn 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 295 ---------FIGILIAFhIVNFVVLTSAASSansgvfstSRILYGLAREKDAP--PVFAKLSSR-HIPRNALILTAMCIA 362
Cdd:TIGR00907 298 algnkagaiFLLCLILV-TSFFCAITCMTAN--------SRMIYAFSRDGGLPfsPLWSRVNPRtQVPLNAVWLSAVWII 368
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 314927087 363 pAIVLVTLEDSVmdAFSLVAGVSSVLYLSVWGLILVCYLKYLGKHPQR 410
Cdd:TIGR00907 369 -LIGLLGLGSST--AFQAIFSVCTVALDVSYVIPIICKLAKGRNTIAP 413
|
|
| cadB |
PRK10435 |
cadaverine/lysine antiporter; |
99-373 |
6.66e-04 |
|
cadaverine/lysine antiporter;
Pssm-ID: 182458 Cd Length: 435 Bit Score: 42.04 E-value: 6.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 99 VGPGAGFYMGWTYWMC-WvvIGN-ADTIAMCGYLAAWFPHLDKWIPA----TCIVLLLTCLNMvavkLFGEMEFWFAMIK 172
Cdd:PRK10435 77 ISPAFGFQTGVLYYHAnW--IGNlAIGITAVSYLSTFFPVLNDPIPAgiacIAIVWVFTFVNM----LGGTWVSRLTTIG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 173 IVTIIALILVGGYLAITGFQPprsgvpaASFSHLWDRGGffPTGFMGFIAGFQIAIFSFQGIEMAGTAAAETADPEHNLP 252
Cdd:PRK10435 151 LVLVLIPVVGTAIVGWHWFDA-------ATYAANWNTSD--TTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314927087 253 KAINSIPARVLIFYVLTLGVI---------------MAVQPWDLINPQASPFVEMFSFIGILIAFHIVNFVVLTSAASSA 317
Cdd:PRK10435 222 LATMLGTGLAGIIYIAATQVIsgmfpasvmaasgapFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAA 301
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 314927087 318 NSGVFstsrilyglarekdaPPVFAKLSSRHIPRNALILTAMCIAPAIVLVTLEDS 373
Cdd:PRK10435 302 NDGNF---------------PKVYGEVDKNGIPKKGLLLAAVKMTALMILITLMNS 342
|
|
| |
