NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|324990010|gb|EGC21951|]
View 

phosphoglycerate mutase family protein [Streptococcus sanguinis SK353]

Protein Classification

histidine phosphatase family protein( domain architecture ID 10001383)

histidine phosphatase family protein is a probable phosphatase that may catalyze the dephosphorylation of a phosphorylated substrate involving a conserved catalytic histidine residue which becomes phosphorylated during the reaction

CATH:  3.40.50.1240
Gene Ontology:  GO:0016791
PubMed:  18092946
SCOP:  3000781

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PhoE COG0406
Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];
4-160 1.44e-33

Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];


:

Pssm-ID: 440175 [Multi-domain]  Cd Length: 195  Bit Score: 117.74  E-value: 1.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   4 TYYFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIE 77
Cdd:COG0406    3 RLYLVRHGETEWNAEGRlqgrlDVPLTELGRAQARALaERLADIPFDAVYSSPLQRARQTAEALAEALGLPVEVDPRLRE 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  78 RKLSS-QAIADQDFEEALMKLWSR-----PTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSAFD 151
Cdd:COG0406   83 IDFGDwEGLTFAELEARYPEALAAwladpAEFRPPGGESLADVQARVRAALEELLARHPGGTVLVVTHGGVIRALLAHLL 162

                 ....*....
gi 324990010 152 SSIDYNFWR 160
Cdd:COG0406  163 GLPLEAFWR 171
 
Name Accession Description Interval E-value
PhoE COG0406
Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];
4-160 1.44e-33

Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];


Pssm-ID: 440175 [Multi-domain]  Cd Length: 195  Bit Score: 117.74  E-value: 1.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   4 TYYFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIE 77
Cdd:COG0406    3 RLYLVRHGETEWNAEGRlqgrlDVPLTELGRAQARALaERLADIPFDAVYSSPLQRARQTAEALAEALGLPVEVDPRLRE 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  78 RKLSS-QAIADQDFEEALMKLWSR-----PTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSAFD 151
Cdd:COG0406   83 IDFGDwEGLTFAELEARYPEALAAwladpAEFRPPGGESLADVQARVRAALEELLARHPGGTVLVVTHGGVIRALLAHLL 162

                 ....*....
gi 324990010 152 SSIDYNFWR 160
Cdd:COG0406  163 GLPLEAFWR 171
His_Phos_1 pfam00300
Histidine phosphatase superfamily (branch 1); The histidine phosphatase superfamily is so ...
6-165 1.01e-31

Histidine phosphatase superfamily (branch 1); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.


Pssm-ID: 459751 [Multi-domain]  Cd Length: 194  Bit Score: 113.07  E-value: 1.01e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010    6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIER- 78
Cdd:pfam00300   2 YLVRHGETEWNLEGRfqgrtDSPLTELGREQAEALaERLAGEPFDAIYSSPLKRARQTAEIIAEALGLPVEIDPRLREId 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   79 -----KLSSQAIADQDFEEALMKLWSRPTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSAFdSS 153
Cdd:pfam00300  82 fgdweGLTFEEIAERYPEEYDAWLADPADYRPPGGESLADVRARVRAALEELAARHPGKTVLVVSHGGVIRALLAHL-LG 160
                         170
                  ....*....|..
gi 324990010  154 IDYNFWRGLSMP 165
Cdd:pfam00300 161 LPLEALRRFPLD 172
PGAM smart00855
Phosphoglycerate mutase family; Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase ...
6-143 4.13e-20

Phosphoglycerate mutase family; Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate... Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.


Pssm-ID: 214859 [Multi-domain]  Cd Length: 158  Bit Score: 82.12  E-value: 4.13e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010     6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLA---DKPITAIYSSTYQRAIQTIEPLAQSLKLaiqsdERLI 76
Cdd:smart00855   3 YLIRHGETEWNREGRlygdtDVPLTELGRAQAEALgRLLAsllLPRFDVVYSSPLKRARQTAEALAIALGL-----PGLR 77
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 324990010    77 ER------KLSSQAIADQDFEEALMKLWSRPTFS---LVGGESNQQAQQRALALLHELESKH--QNEEIIISSHGNLI 143
Cdd:smart00855  78 ERdfgaweGLTWDEIAAKYPEEYLAAWRDPYDPAppaPPGGESLADLVERVEPALDELIATAdaSGQNVLIVSHGGVI 155
HP_PGM_like cd07067
Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly ...
6-180 7.76e-18

Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG.


Pssm-ID: 132718 [Multi-domain]  Cd Length: 153  Bit Score: 75.82  E-value: 7.76e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADK--PITAIYSSTYQRAIQTIEPLAQSL-KLAIQSDERLI 76
Cdd:cd07067    3 YLVRHGESEWNAEGRfqgwtDVPLTEKGREQARALgKRLKELgiKFDRIYSSPLKRAIQTAEIILEELpGLPVEVDPRLR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  77 ErklssqaiadqdfeealmklwsrptfslvggesnqqaqQRALALLHELESKHQNEEIIISSHGNLICILLSAFDSSIDY 156
Cdd:cd07067   83 E--------------------------------------ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDE 124
                        170       180
                 ....*....|....*....|....*
gi 324990010 157 NFWR-GLSMPDVLVLDKDERITHLL 180
Cdd:cd07067  125 DILRlNLPNGSISVLELDENGGGVL 149
ribazole_cobC TIGR03162
alpha-ribazole phosphatase; Members of this protein family include the known CobC protein of ...
6-168 1.61e-12

alpha-ribazole phosphatase; Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 274461 [Multi-domain]  Cd Length: 177  Bit Score: 62.25  E-value: 1.61e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010    6 YFIRHAhsnyTPDEINR--------PLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLI 76
Cdd:TIGR03162   2 YLIRHG----ETDVNAGlcygqtdvPLAESGEEQAAALrEKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDDRLR 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   77 E------RKLSSQAIADQDFE-EALMKLWsrPTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSa 149
Cdd:TIGR03162  78 EmdfgdwEGRSWDEIPEAYPElDAWAADW--QHARPPGGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLA- 154
                         170
                  ....*....|....*....
gi 324990010  150 fdssidynFWRGLSMPDVL 168
Cdd:TIGR03162 155 --------HLLGLPLEQWW 165
PRK13463 PRK13463
phosphoserine phosphatase 1;
1-159 4.14e-12

phosphoserine phosphatase 1;


Pssm-ID: 172065 [Multi-domain]  Cd Length: 203  Bit Score: 61.99  E-value: 4.14e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   1 MNNTYYFIRHAHSNYT-----PDEINRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDER 74
Cdd:PRK13463   1 MKTTVYVTRHGETEWNvakrmQGRKNSALTENGILQAKQLgERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  75 LIERKL---SSQAIAD--QDFEEALMKLWSRP-TFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLS 148
Cdd:PRK13463  81 FYEINMgiwEGQTIDDieRQYPDDIQLFWNEPhLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVG 160
                        170
                 ....*....|.
gi 324990010 149 AFDSSIDYNFW 159
Cdd:PRK13463 161 HFAGIEIENVW 171
 
Name Accession Description Interval E-value
PhoE COG0406
Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];
4-160 1.44e-33

Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism];


Pssm-ID: 440175 [Multi-domain]  Cd Length: 195  Bit Score: 117.74  E-value: 1.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   4 TYYFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIE 77
Cdd:COG0406    3 RLYLVRHGETEWNAEGRlqgrlDVPLTELGRAQARALaERLADIPFDAVYSSPLQRARQTAEALAEALGLPVEVDPRLRE 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  78 RKLSS-QAIADQDFEEALMKLWSR-----PTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSAFD 151
Cdd:COG0406   83 IDFGDwEGLTFAELEARYPEALAAwladpAEFRPPGGESLADVQARVRAALEELLARHPGGTVLVVTHGGVIRALLAHLL 162

                 ....*....
gi 324990010 152 SSIDYNFWR 160
Cdd:COG0406  163 GLPLEAFWR 171
His_Phos_1 pfam00300
Histidine phosphatase superfamily (branch 1); The histidine phosphatase superfamily is so ...
6-165 1.01e-31

Histidine phosphatase superfamily (branch 1); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.


Pssm-ID: 459751 [Multi-domain]  Cd Length: 194  Bit Score: 113.07  E-value: 1.01e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010    6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIER- 78
Cdd:pfam00300   2 YLVRHGETEWNLEGRfqgrtDSPLTELGREQAEALaERLAGEPFDAIYSSPLKRARQTAEIIAEALGLPVEIDPRLREId 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   79 -----KLSSQAIADQDFEEALMKLWSRPTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSAFdSS 153
Cdd:pfam00300  82 fgdweGLTFEEIAERYPEEYDAWLADPADYRPPGGESLADVRARVRAALEELAARHPGKTVLVVSHGGVIRALLAHL-LG 160
                         170
                  ....*....|..
gi 324990010  154 IDYNFWRGLSMP 165
Cdd:pfam00300 161 LPLEALRRFPLD 172
PGAM smart00855
Phosphoglycerate mutase family; Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase ...
6-143 4.13e-20

Phosphoglycerate mutase family; Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate... Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.


Pssm-ID: 214859 [Multi-domain]  Cd Length: 158  Bit Score: 82.12  E-value: 4.13e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010     6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLA---DKPITAIYSSTYQRAIQTIEPLAQSLKLaiqsdERLI 76
Cdd:smart00855   3 YLIRHGETEWNREGRlygdtDVPLTELGRAQAEALgRLLAsllLPRFDVVYSSPLKRARQTAEALAIALGL-----PGLR 77
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 324990010    77 ER------KLSSQAIADQDFEEALMKLWSRPTFS---LVGGESNQQAQQRALALLHELESKH--QNEEIIISSHGNLI 143
Cdd:smart00855  78 ERdfgaweGLTWDEIAAKYPEEYLAAWRDPYDPAppaPPGGESLADLVERVEPALDELIATAdaSGQNVLIVSHGGVI 155
HP_PGM_like cd07067
Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly ...
6-180 7.76e-18

Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG.


Pssm-ID: 132718 [Multi-domain]  Cd Length: 153  Bit Score: 75.82  E-value: 7.76e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADK--PITAIYSSTYQRAIQTIEPLAQSL-KLAIQSDERLI 76
Cdd:cd07067    3 YLVRHGESEWNAEGRfqgwtDVPLTEKGREQARALgKRLKELgiKFDRIYSSPLKRAIQTAEIILEELpGLPVEVDPRLR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  77 ErklssqaiadqdfeealmklwsrptfslvggesnqqaqQRALALLHELESKHQNEEIIISSHGNLICILLSAFDSSIDY 156
Cdd:cd07067   83 E--------------------------------------ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDE 124
                        170       180
                 ....*....|....*....|....*
gi 324990010 157 NFWR-GLSMPDVLVLDKDERITHLL 180
Cdd:cd07067  125 DILRlNLPNGSISVLELDENGGGVL 149
SixA COG2062
Phosphohistidine phosphatase SixA [Signal transduction mechanisms];
6-75 8.42e-13

Phosphohistidine phosphatase SixA [Signal transduction mechanisms];


Pssm-ID: 441665 [Multi-domain]  Cd Length: 153  Bit Score: 62.58  E-value: 8.42e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 324990010   6 YFIRHAHS----NYTPDEiNRPLSDKGRESLARL-EFLADK--PITAIYSSTYQRAIQTIEPLAQSLKLA--IQSDERL 75
Cdd:COG2062    2 ILVRHAKAewraPGGDDF-DRPLTERGRRQARAMaRWLAALglKPDRILSSPALRARQTAEILAEALGLPpkVEVEDEL 79
ribazole_cobC TIGR03162
alpha-ribazole phosphatase; Members of this protein family include the known CobC protein of ...
6-168 1.61e-12

alpha-ribazole phosphatase; Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 274461 [Multi-domain]  Cd Length: 177  Bit Score: 62.25  E-value: 1.61e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010    6 YFIRHAhsnyTPDEINR--------PLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLI 76
Cdd:TIGR03162   2 YLIRHG----ETDVNAGlcygqtdvPLAESGEEQAAALrEKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDDRLR 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   77 E------RKLSSQAIADQDFE-EALMKLWsrPTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLSa 149
Cdd:TIGR03162  78 EmdfgdwEGRSWDEIPEAYPElDAWAADW--QHARPPGGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLA- 154
                         170
                  ....*....|....*....
gi 324990010  150 fdssidynFWRGLSMPDVL 168
Cdd:TIGR03162 155 --------HLLGLPLEQWW 165
PRK13463 PRK13463
phosphoserine phosphatase 1;
1-159 4.14e-12

phosphoserine phosphatase 1;


Pssm-ID: 172065 [Multi-domain]  Cd Length: 203  Bit Score: 61.99  E-value: 4.14e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   1 MNNTYYFIRHAHSNYT-----PDEINRPLSDKGRESLARL-EFLADKPITAIYSSTYQRAIQTIEPLAQSLKLAIQSDER 74
Cdd:PRK13463   1 MKTTVYVTRHGETEWNvakrmQGRKNSALTENGILQAKQLgERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  75 LIERKL---SSQAIAD--QDFEEALMKLWSRP-TFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSHGNLICILLS 148
Cdd:PRK13463  81 FYEINMgiwEGQTIDDieRQYPDDIQLFWNEPhLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVG 160
                        170
                 ....*....|.
gi 324990010 149 AFDSSIDYNFW 159
Cdd:PRK13463 161 HFAGIEIENVW 171
HP cd07040
Histidine phosphatase domain found in a functionally diverse set of proteins, mostly ...
6-174 3.78e-11

Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system; phytases scavenge phosphate from extracellular sources. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Clinical applications include the use of prostatic acid phosphatase (PAP) as a serum marker for prostate cancer. Agricultural applications include the addition of phytases to animal feed.


Pssm-ID: 132716 [Multi-domain]  Cd Length: 153  Bit Score: 58.19  E-value: 3.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010   6 YFIRHAHSNYTPDEI-----NRPLSDKGRESLARL-EFLADK--PITAIYSSTYQRAIQTIEPLAQSL--KLAIQSDERl 75
Cdd:cd07040    3 YLVRHGEREPNAEGRftgwgDGPLTEKGRQQARELgKALRERyiKFDRIYSSPLKRAIQTAEIILEGLfeGLPVEVDPR- 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  76 ierklssqaiadqdfeealmklwsrptfslvggesnqqaqQRALALLHELESKHQNEE--IIISSHGNLICILLSAFDsS 153
Cdd:cd07040   82 ----------------------------------------ARVLNALLELLARHLLDGknVLIVSHGGTIRALLAALL-G 120
                        170       180
                 ....*....|....*....|...
gi 324990010 154 IDYNFWRGLSMPD--VLVLDKDE 174
Cdd:cd07040  121 LSDEEILSLNLPNgsILVLELDE 143
PRK07238 PRK07238
bifunctional RNase H/acid phosphatase; Provisional
21-139 7.11e-09

bifunctional RNase H/acid phosphatase; Provisional


Pssm-ID: 180903 [Multi-domain]  Cd Length: 372  Bit Score: 53.83  E-value: 7.11e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324990010  21 NRPLSDKGRESLARL-EFLADK-PITAIYSSTYQRAIQTIEPLAQSLKLAIQSDERLIERK------LSSQAIADQDFEe 92
Cdd:PRK07238 195 NPELTEVGRRQAAAAaRYLAARgGIDAVVSSPLQRARDTAAAAAKALGLDVTVDDDLIETDfgawegLTFAEAAERDPE- 273
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 324990010  93 aLMKLW-SRPTFSLVGGESNQQAQQRALALLHELESKHQNEEIIISSH 139
Cdd:PRK07238 274 -LHRAWlADTSVAPPGGESFDAVARRVRRARDRLIAEYPGATVLVVSH 320
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH