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Conserved domains on  [gi|401266135|gb|EJR72214|]
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hypothetical protein IK5_02701 [Bacillus cereus VD154]

Protein Classification

DUF3899 domain-containing protein( domain architecture ID 10586624)

DUF3899 domain-containing protein may be a putative tryptophanyl-tRNA synthetase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3899 pfam13038
Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.
 35-120 5.51e-10

Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.


:

Pssm-ID: 432945  Cd Length: 84  Bit Score: 51.90  E-value: 5.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401266135   35 VNILFYIALFFILIGGFLYIFQNGFFNVTIYAFQRVFGT--NKKIDSLIEEVEEPTDKKeriyKTYSFKWTYPICITGIF 112
Cdd:pfam13038   1 INILFYLGLLLLIIGILLIVLRSGFFDGFSYGFRRLKRLfsKKPGSKKDDSYEEYKEKK----KNSSKKWTRPTLIIGLL 76


                  ....*...
gi 401266135  113 LGLFSTLI 120
Cdd:pfam13038  77 LILLSIVL 84
 
Name Accession Description Interval E-value
DUF3899 pfam13038
Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.
 35-120 5.51e-10

Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.


Pssm-ID: 432945  Cd Length: 84  Bit Score: 51.90  E-value: 5.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401266135   35 VNILFYIALFFILIGGFLYIFQNGFFNVTIYAFQRVFGT--NKKIDSLIEEVEEPTDKKeriyKTYSFKWTYPICITGIF 112
Cdd:pfam13038   1 INILFYLGLLLLIIGILLIVLRSGFFDGFSYGFRRLKRLfsKKPGSKKDDSYEEYKEKK----KNSSKKWTRPTLIIGLL 76


                  ....*...
gi 401266135  113 LGLFSTLI 120
Cdd:pfam13038  77 LILLSIVL 84
 
Name Accession Description Interval E-value
DUF3899 pfam13038
Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.
 35-120 5.51e-10

Domain of unknown function (DUF3899); Putative Tryptophanyl-tRNA synthetase.


Pssm-ID: 432945  Cd Length: 84  Bit Score: 51.90  E-value: 5.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401266135   35 VNILFYIALFFILIGGFLYIFQNGFFNVTIYAFQRVFGT--NKKIDSLIEEVEEPTDKKeriyKTYSFKWTYPICITGIF 112
Cdd:pfam13038   1 INILFYLGLLLLIIGILLIVLRSGFFDGFSYGFRRLKRLfsKKPGSKKDDSYEEYKEKK----KNSSKKWTRPTLIIGLL 76


                  ....*...
gi 401266135  113 LGLFSTLI 120
Cdd:pfam13038  77 LILLSIVL 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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