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Conserved domains on  [gi|402076619|gb|EJT72042|]
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hypothetical protein GGTG_11290 [Gaeumannomyces tritici R3-111a-1]

Protein Classification

Sfi1 family protein( domain architecture ID 12093899)

Sfi1 family protein similar to Schizosaccharomyces pombe protein sfi1, also known as suppressor of fermentation induced loss of stress resistance protein 1, which is a component of the spindle pole body (SPB) half-bridge involved in the initial steps of SPB duplication

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Sfi1 pfam08457
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ...
 532-1093 1.58e-166

Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.


:

Pssm-ID: 430007 [Multi-domain]  Cd Length: 570  Bit Score: 511.84  E-value: 1.58e-166
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   532 KAESARREAENARLHERMMRRAARAADLSLLHKAFTHWRAAASHEAERTEIARRHLLRKKVFVAWSEKVSADRTKVKAFA 611
Cdd:pfam08457    1 ILEEKRRAAETERFFEHLERRAARARDLYLLTKAFTHWAQAASEEVERTSAARRHILRKKYFNAWREITAVNELKAQRFA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   612 ATGLLGAWSNALEQHREVKRFSAQMYPADLAKRCFTKWRREYQSCAAELWYSVRLAEDCVHKWKHETSLCRGLHAAAEAD 691
Cdd:pfam08457   81 LKRPLGAWRRRTLQIRVREEVAVQVYQENLLKRSFWKWFWEFCERRAPQWYDFRLKRRSLLTWLRKFRTLREREQEAEAK 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   692 AVHSLRASSIGAWRSMSAETKASTVEASDRLEKRQLSGLLSTWHTQAMLESRLRRALVSREERIKTESLHVWKLNLQAAG 771
Cdd:pfam08457  161 RKRLLLSSALQIWSERTEAVQAAEQEADSFRRRKLLRRALDEWRIQARLEPALRQVSAKVDRRILRSALSVWKLRARMSR 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   772 TQKQAAQRRSIQGFARHWVLELELKLFRENVDSLTLLSSTYQWVLESRSKLVRRFNRKSTQNSALLNLRAEYAKEKRRRK 851
Cdd:pfam08457  241 QAREVDRARILRNAWTTWNDELRCKALRERIDERLKLEALYKWVLEERLRLFQRIREQRLKREVLSTWVTNTRDTRTRLL 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   852 EHQALAKLCYKATIADAFIGAMSRQLGESQWMEEEARRADSAQVTAQAVQGWAAQTAEHEEMEDAAQRGAFYVGAINCLH 931
Cdd:pfam08457  321 RHEEEFEEHRNRKLLRSKLLKWRDQLAEQREREIAANEFYAPRLLQEALDAWRERHQHVQKLEKWARDARFYFLATRTLK 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   932 AWPRLAKAARQERLRLTYLAFRRNMKIERRAGCLAVWREATYNSAVTAWEFERRRQEQLLDEMVDWLNDWIGET----NR 1007
Cdd:pfam08457  401 KWRAATEESRRERRQDAYAQVRRKVKINLARRALSKWRSKAAEVADLEQQADQLRQNRLLEDAIELFDRWRERTakrkQR 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619  1008 MIGMGQTAVEVGTEAAVGAWRGAASRLEATWSDAAAYEA---EAVATARLEDWELRLVTIRGREHTASGLAEKNRKRLAR 1084
Cdd:pfam08457  481 AEDADQFYAEQLLRSYLARWRERLRELRELEQDADAYRRehtLGQAAAALRKWSLRLFQIRSREETADALRERNLRKHLR 560


                   ....*....
gi 402076619  1085 QALGFWLGQ 1093
Cdd:pfam08457  561 NMLRHWLQK 569
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 1111-1401 2.18e-05

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1111 GRTPL--RSSLRRSQAATAPPAfASSPFFPPRREGGPRQTDEAPPPTVRPRDQRPPRPHSQPdlgySSTAMSLDSQAHQR 1188
Cdd:PHA03247 2598 PRAPVddRGDPRGPAPPSPLPP-DTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAP----GRVSRPRRARRLGR 2672

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1189 QASNNASLGGSYRQPKPPVRLGAGRFSQSTSGPYTPQP------SHQQQQQQQQQQQHGYPYTTLAGAR----DSILAPI 1258
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPpavpAGPATPG 2752

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1259 SERSEGsSRAQASMRHSTTDSNMGPSADRLRSFREKLASASRFADSLAEFDDNGDDDDDNDGRAPSSNSRASRAAGKAPM 1338
Cdd:PHA03247 2753 GPARPA-RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 402076619 1339 TAATR-PPPVVMDTPTRWTGMPTSLAP----SRRGDPGPTTTPMAPLPSPVERQLRREYAPSATMPLP 1401
Cdd:PHA03247 2832 TSAQPtAPPPPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFA 2899
 
Name Accession Description Interval E-value
Sfi1 pfam08457
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ...
 532-1093 1.58e-166

Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.


Pssm-ID: 430007 [Multi-domain]  Cd Length: 570  Bit Score: 511.84  E-value: 1.58e-166
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   532 KAESARREAENARLHERMMRRAARAADLSLLHKAFTHWRAAASHEAERTEIARRHLLRKKVFVAWSEKVSADRTKVKAFA 611
Cdd:pfam08457    1 ILEEKRRAAETERFFEHLERRAARARDLYLLTKAFTHWAQAASEEVERTSAARRHILRKKYFNAWREITAVNELKAQRFA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   612 ATGLLGAWSNALEQHREVKRFSAQMYPADLAKRCFTKWRREYQSCAAELWYSVRLAEDCVHKWKHETSLCRGLHAAAEAD 691
Cdd:pfam08457   81 LKRPLGAWRRRTLQIRVREEVAVQVYQENLLKRSFWKWFWEFCERRAPQWYDFRLKRRSLLTWLRKFRTLREREQEAEAK 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   692 AVHSLRASSIGAWRSMSAETKASTVEASDRLEKRQLSGLLSTWHTQAMLESRLRRALVSREERIKTESLHVWKLNLQAAG 771
Cdd:pfam08457  161 RKRLLLSSALQIWSERTEAVQAAEQEADSFRRRKLLRRALDEWRIQARLEPALRQVSAKVDRRILRSALSVWKLRARMSR 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   772 TQKQAAQRRSIQGFARHWVLELELKLFRENVDSLTLLSSTYQWVLESRSKLVRRFNRKSTQNSALLNLRAEYAKEKRRRK 851
Cdd:pfam08457  241 QAREVDRARILRNAWTTWNDELRCKALRERIDERLKLEALYKWVLEERLRLFQRIREQRLKREVLSTWVTNTRDTRTRLL 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   852 EHQALAKLCYKATIADAFIGAMSRQLGESQWMEEEARRADSAQVTAQAVQGWAAQTAEHEEMEDAAQRGAFYVGAINCLH 931
Cdd:pfam08457  321 RHEEEFEEHRNRKLLRSKLLKWRDQLAEQREREIAANEFYAPRLLQEALDAWRERHQHVQKLEKWARDARFYFLATRTLK 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   932 AWPRLAKAARQERLRLTYLAFRRNMKIERRAGCLAVWREATYNSAVTAWEFERRRQEQLLDEMVDWLNDWIGET----NR 1007
Cdd:pfam08457  401 KWRAATEESRRERRQDAYAQVRRKVKINLARRALSKWRSKAAEVADLEQQADQLRQNRLLEDAIELFDRWRERTakrkQR 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619  1008 MIGMGQTAVEVGTEAAVGAWRGAASRLEATWSDAAAYEA---EAVATARLEDWELRLVTIRGREHTASGLAEKNRKRLAR 1084
Cdd:pfam08457  481 AEDADQFYAEQLLRSYLARWRERLRELRELEQDADAYRRehtLGQAAAALRKWSLRLFQIRSREETADALRERNLRKHLR 560


                   ....*....
gi 402076619  1085 QALGFWLGQ 1093
Cdd:pfam08457  561 NMLRHWLQK 569
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1111-1401 2.18e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1111 GRTPL--RSSLRRSQAATAPPAfASSPFFPPRREGGPRQTDEAPPPTVRPRDQRPPRPHSQPdlgySSTAMSLDSQAHQR 1188
Cdd:PHA03247 2598 PRAPVddRGDPRGPAPPSPLPP-DTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAP----GRVSRPRRARRLGR 2672

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1189 QASNNASLGGSYRQPKPPVRLGAGRFSQSTSGPYTPQP------SHQQQQQQQQQQQHGYPYTTLAGAR----DSILAPI 1258
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPpavpAGPATPG 2752

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1259 SERSEGsSRAQASMRHSTTDSNMGPSADRLRSFREKLASASRFADSLAEFDDNGDDDDDNDGRAPSSNSRASRAAGKAPM 1338
Cdd:PHA03247 2753 GPARPA-RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 402076619 1339 TAATR-PPPVVMDTPTRWTGMPTSLAP----SRRGDPGPTTTPMAPLPSPVERQLRREYAPSATMPLP 1401
Cdd:PHA03247 2832 TSAQPtAPPPPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFA 2899
 
Name Accession Description Interval E-value
Sfi1 pfam08457
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ...
 532-1093 1.58e-166

Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.


Pssm-ID: 430007 [Multi-domain]  Cd Length: 570  Bit Score: 511.84  E-value: 1.58e-166
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   532 KAESARREAENARLHERMMRRAARAADLSLLHKAFTHWRAAASHEAERTEIARRHLLRKKVFVAWSEKVSADRTKVKAFA 611
Cdd:pfam08457    1 ILEEKRRAAETERFFEHLERRAARARDLYLLTKAFTHWAQAASEEVERTSAARRHILRKKYFNAWREITAVNELKAQRFA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   612 ATGLLGAWSNALEQHREVKRFSAQMYPADLAKRCFTKWRREYQSCAAELWYSVRLAEDCVHKWKHETSLCRGLHAAAEAD 691
Cdd:pfam08457   81 LKRPLGAWRRRTLQIRVREEVAVQVYQENLLKRSFWKWFWEFCERRAPQWYDFRLKRRSLLTWLRKFRTLREREQEAEAK 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   692 AVHSLRASSIGAWRSMSAETKASTVEASDRLEKRQLSGLLSTWHTQAMLESRLRRALVSREERIKTESLHVWKLNLQAAG 771
Cdd:pfam08457  161 RKRLLLSSALQIWSERTEAVQAAEQEADSFRRRKLLRRALDEWRIQARLEPALRQVSAKVDRRILRSALSVWKLRARMSR 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   772 TQKQAAQRRSIQGFARHWVLELELKLFRENVDSLTLLSSTYQWVLESRSKLVRRFNRKSTQNSALLNLRAEYAKEKRRRK 851
Cdd:pfam08457  241 QAREVDRARILRNAWTTWNDELRCKALRERIDERLKLEALYKWVLEERLRLFQRIREQRLKREVLSTWVTNTRDTRTRLL 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   852 EHQALAKLCYKATIADAFIGAMSRQLGESQWMEEEARRADSAQVTAQAVQGWAAQTAEHEEMEDAAQRGAFYVGAINCLH 931
Cdd:pfam08457  321 RHEEEFEEHRNRKLLRSKLLKWRDQLAEQREREIAANEFYAPRLLQEALDAWRERHQHVQKLEKWARDARFYFLATRTLK 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619   932 AWPRLAKAARQERLRLTYLAFRRNMKIERRAGCLAVWREATYNSAVTAWEFERRRQEQLLDEMVDWLNDWIGET----NR 1007
Cdd:pfam08457  401 KWRAATEESRRERRQDAYAQVRRKVKINLARRALSKWRSKAAEVADLEQQADQLRQNRLLEDAIELFDRWRERTakrkQR 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619  1008 MIGMGQTAVEVGTEAAVGAWRGAASRLEATWSDAAAYEA---EAVATARLEDWELRLVTIRGREHTASGLAEKNRKRLAR 1084
Cdd:pfam08457  481 AEDADQFYAEQLLRSYLARWRERLRELRELEQDADAYRRehtLGQAAAALRKWSLRLFQIRSREETADALRERNLRKHLR 560


                   ....*....
gi 402076619  1085 QALGFWLGQ 1093
Cdd:pfam08457  561 NMLRHWLQK 569
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1111-1401 2.18e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1111 GRTPL--RSSLRRSQAATAPPAfASSPFFPPRREGGPRQTDEAPPPTVRPRDQRPPRPHSQPdlgySSTAMSLDSQAHQR 1188
Cdd:PHA03247 2598 PRAPVddRGDPRGPAPPSPLPP-DTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAP----GRVSRPRRARRLGR 2672

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1189 QASNNASLGGSYRQPKPPVRLGAGRFSQSTSGPYTPQP------SHQQQQQQQQQQQHGYPYTTLAGAR----DSILAPI 1258
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPpavpAGPATPG 2752

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1259 SERSEGsSRAQASMRHSTTDSNMGPSADRLRSFREKLASASRFADSLAEFDDNGDDDDDNDGRAPSSNSRASRAAGKAPM 1338
Cdd:PHA03247 2753 GPARPA-RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 402076619 1339 TAATR-PPPVVMDTPTRWTGMPTSLAP----SRRGDPGPTTTPMAPLPSPVERQLRREYAPSATMPLP 1401
Cdd:PHA03247 2832 TSAQPtAPPPPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFA 2899
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 1109-1440 1.11e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.09  E-value: 1.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1109 SGGRTPLRSSLRRSQAATAPPAFASSPFFPPRREGGPRQTDEAPPPTVRPRDQRPPRPHSQPDLGYSSTAmSLDSQAHQR 1188
Cdd:PHA03307   92 LSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAA-VASDAASSR 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1189 QASNNASLGGSYRQPKPPVRLGAGRFSQSTSGPYTPQPSHQQQQQQQQQQQHGYPYTTLAGARDSILAPISERSEGS--- 1265
Cdd:PHA03307  171 QAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCgwg 250

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1266 ----------------SRAQASMRHSTTDSNMGPSADRlRSFREKLASASRfADSLAEFDDNGDDDDDNDGRAPSSNSRA 1329
Cdd:PHA03307  251 penecplprpapitlpTRIWEASGWNGPSSRPGPASSS-SSPRERSPSPSP-SSPGSGPAPSSPRASSSSSSSRESSSSS 328

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1330 SRAAGKAPMTAATRPPPVVMDTPTRWTGMPTSLAPSRRGDPGPTTTPMAPLPSPVERQLRREYAPSATMPLPASSSARGG 1409
Cdd:PHA03307  329 TSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFP 408

                         330       340       350
                  ....*....|....*....|....*....|.
gi 402076619 1410 GiARPNKLGRSWAGRPPRVTFSGVDQDSDGE 1440
Cdd:PHA03307  409 A-GRPRPSPLDAGAASGAFYARYPLLTPSGE 438
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1198-1414 9.44e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 9.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1198 GSYRQPKPPvrlgagrfSQSTSGPYTPQPSHQQQQQQQQQQQHGYPYTTLAGARDSiLAPISERSEGSSRAQASMRHSTT 1277
Cdd:PHA03247 2606 GDPRGPAPP--------SPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPR-DDPAPGRVSRPRRARRLGRAAQA 2676

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402076619 1278 DSNmgPSADRLRSFREKLASASRFADSLAEFDDNGDDDDDNDGRAPSSNSRASRAAGKAPMTAATRPPPVVmdtptrwTG 1357
Cdd:PHA03247 2677 SSP--PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP-------AG 2747

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 402076619 1358 MPTSLAPSRRGDPGPTTTPMAPLPSPVerqlrREYAPSATMPLPASSSARGGGIARP 1414
Cdd:PHA03247 2748 PATPGGPARPARPPTTAGPPAPAPPAA-----PAAGPPRRLTRPAVASLSESRESLP 2799
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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