NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|409044709|gb|EKM54190|]
View 

hypothetical protein PHACADRAFT_96531 [Phanerochaete carnosa HHB-10118-sp]

Protein Classification

mitochondrial distribution and morphology protein( domain architecture ID 10547693)

mitochondrial distribution and morphology protein (MDM) such as MDM31 that is involved in the organization of the mitochondrial membranes and the global structure of the mitochondria

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MDM31_MDM32 pfam08118
Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are ...
127-654 0e+00

Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are yeast mitochondrial inner membrane proteins MDM31 and MDM32. These proteins are required for the maintenance of mitochondrial morphology, and the stability of mitochondrial DNA.


:

Pssm-ID: 429828  Cd Length: 519  Bit Score: 836.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  127 RDDFLNAASGFWQRMRVRFKWLTIRSFRKYNADEISAFITWFFMSQTLWLFVGTTTFFSVFLITVNSLRLQENVARAISD 206
Cdd:pfam08118   1 KEELLAAANGFWSRLRIRFKWFLIRSTRPFNADDISAFISWLLMGNVLWILLGTTTFFSLVIYLINTVFAQETLARKIGN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  207 YLTAETGIHIVFESAIVPKWKDSRISFKNVYITRRPDVV--------NKVRADRNTGYHYAtGYDVSNHPanhgfmydee 278
Cdd:pfam08118  81 YLTKSTGVTVVFESAIVPKWKDGKISFKNVFVSRRPGQGkssftkgsQKEAAARAAAALAA-SEDVLVSE---------- 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  279 dsilEELPGEDTNYSMFDLSVDTIDVTLSFTRWLEGKGLVTDAVVKGVRGVLDRRFVHWDPenPLDPASFRHQARQGDFE 358
Cdd:pfam08118 150 ----EDEEEDDGNYTQFDLTIDTVDVTLSFSKWLNGKGLLDDVEIKGVRGVVDRTHVRWDP--PLDPKSYRHEHQPGDFE 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  359 LESFQLEDLLVTVYQPGSFRPFTASIFRADIRTFRKQWLFYDFLSAENVVGQFDNCLFSLHKPQSIGRTTEQDLKDGQWA 438
Cdd:pfam08118 224 IESFKMEDVLVTVYQPNGFRPFTVSIFNCDLPQLRKQWLFYDFLNANNMSGSFDNSLFTIHKRQSLGRTNEGDEDDGPWK 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  439 RMSRLRIDGVNIDHLQhmSTQEGPISWITSGKVDAVLDIKFPRDySDDSPFNTLIGEIADAITTAATSAvaeRIPGQREL 518
Cdd:pfam08118 304 KMSRLRIDGLNIDHLN--RGVEGPFGWITEGKVDMVADIMFPED-DDELSLSKVMSEIYDRIETEATSN---RYLNILEL 377
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  519 AKPPLSAPSD-----QTAMPADSAEHPKIIIDIDLRFRDLKTAVPLFTADLSYANNALIRPIVAFMNANRTLIPIHSRVV 593
Cdd:pfam08118 378 AKPAISAPYDefrspEEEDSPEEDPNRYVVMDLRLRLNDVKAAVPLFTPDLSYVNNALIRPIVAYINSKRTYIPIKCRVV 457
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 409044709  594 KDLSNFDGAWTMWETGLVDDIGAKVYEAMAYHVTQANFN-RRVKAVSAWSLQMTASAILSAL 654
Cdd:pfam08118 458 KRLSDFDGSWTVYDSGLMDDISAEVYDAFARYVADDQARrRRIKKVGFWSLQLAAQALLLGL 519
 
Name Accession Description Interval E-value
MDM31_MDM32 pfam08118
Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are ...
127-654 0e+00

Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are yeast mitochondrial inner membrane proteins MDM31 and MDM32. These proteins are required for the maintenance of mitochondrial morphology, and the stability of mitochondrial DNA.


Pssm-ID: 429828  Cd Length: 519  Bit Score: 836.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  127 RDDFLNAASGFWQRMRVRFKWLTIRSFRKYNADEISAFITWFFMSQTLWLFVGTTTFFSVFLITVNSLRLQENVARAISD 206
Cdd:pfam08118   1 KEELLAAANGFWSRLRIRFKWFLIRSTRPFNADDISAFISWLLMGNVLWILLGTTTFFSLVIYLINTVFAQETLARKIGN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  207 YLTAETGIHIVFESAIVPKWKDSRISFKNVYITRRPDVV--------NKVRADRNTGYHYAtGYDVSNHPanhgfmydee 278
Cdd:pfam08118  81 YLTKSTGVTVVFESAIVPKWKDGKISFKNVFVSRRPGQGkssftkgsQKEAAARAAAALAA-SEDVLVSE---------- 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  279 dsilEELPGEDTNYSMFDLSVDTIDVTLSFTRWLEGKGLVTDAVVKGVRGVLDRRFVHWDPenPLDPASFRHQARQGDFE 358
Cdd:pfam08118 150 ----EDEEEDDGNYTQFDLTIDTVDVTLSFSKWLNGKGLLDDVEIKGVRGVVDRTHVRWDP--PLDPKSYRHEHQPGDFE 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  359 LESFQLEDLLVTVYQPGSFRPFTASIFRADIRTFRKQWLFYDFLSAENVVGQFDNCLFSLHKPQSIGRTTEQDLKDGQWA 438
Cdd:pfam08118 224 IESFKMEDVLVTVYQPNGFRPFTVSIFNCDLPQLRKQWLFYDFLNANNMSGSFDNSLFTIHKRQSLGRTNEGDEDDGPWK 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  439 RMSRLRIDGVNIDHLQhmSTQEGPISWITSGKVDAVLDIKFPRDySDDSPFNTLIGEIADAITTAATSAvaeRIPGQREL 518
Cdd:pfam08118 304 KMSRLRIDGLNIDHLN--RGVEGPFGWITEGKVDMVADIMFPED-DDELSLSKVMSEIYDRIETEATSN---RYLNILEL 377
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  519 AKPPLSAPSD-----QTAMPADSAEHPKIIIDIDLRFRDLKTAVPLFTADLSYANNALIRPIVAFMNANRTLIPIHSRVV 593
Cdd:pfam08118 378 AKPAISAPYDefrspEEEDSPEEDPNRYVVMDLRLRLNDVKAAVPLFTPDLSYVNNALIRPIVAYINSKRTYIPIKCRVV 457
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 409044709  594 KDLSNFDGAWTMWETGLVDDIGAKVYEAMAYHVTQANFN-RRVKAVSAWSLQMTASAILSAL 654
Cdd:pfam08118 458 KRLSDFDGSWTVYDSGLMDDISAEVYDAFARYVADDQARrRRIKKVGFWSLQLAAQALLLGL 519
 
Name Accession Description Interval E-value
MDM31_MDM32 pfam08118
Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are ...
127-654 0e+00

Yeast mitochondrial distribution and morphology (MDM) proteins; Proteins in this family are yeast mitochondrial inner membrane proteins MDM31 and MDM32. These proteins are required for the maintenance of mitochondrial morphology, and the stability of mitochondrial DNA.


Pssm-ID: 429828  Cd Length: 519  Bit Score: 836.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  127 RDDFLNAASGFWQRMRVRFKWLTIRSFRKYNADEISAFITWFFMSQTLWLFVGTTTFFSVFLITVNSLRLQENVARAISD 206
Cdd:pfam08118   1 KEELLAAANGFWSRLRIRFKWFLIRSTRPFNADDISAFISWLLMGNVLWILLGTTTFFSLVIYLINTVFAQETLARKIGN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  207 YLTAETGIHIVFESAIVPKWKDSRISFKNVYITRRPDVV--------NKVRADRNTGYHYAtGYDVSNHPanhgfmydee 278
Cdd:pfam08118  81 YLTKSTGVTVVFESAIVPKWKDGKISFKNVFVSRRPGQGkssftkgsQKEAAARAAAALAA-SEDVLVSE---------- 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  279 dsilEELPGEDTNYSMFDLSVDTIDVTLSFTRWLEGKGLVTDAVVKGVRGVLDRRFVHWDPenPLDPASFRHQARQGDFE 358
Cdd:pfam08118 150 ----EDEEEDDGNYTQFDLTIDTVDVTLSFSKWLNGKGLLDDVEIKGVRGVVDRTHVRWDP--PLDPKSYRHEHQPGDFE 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  359 LESFQLEDLLVTVYQPGSFRPFTASIFRADIRTFRKQWLFYDFLSAENVVGQFDNCLFSLHKPQSIGRTTEQDLKDGQWA 438
Cdd:pfam08118 224 IESFKMEDVLVTVYQPNGFRPFTVSIFNCDLPQLRKQWLFYDFLNANNMSGSFDNSLFTIHKRQSLGRTNEGDEDDGPWK 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  439 RMSRLRIDGVNIDHLQhmSTQEGPISWITSGKVDAVLDIKFPRDySDDSPFNTLIGEIADAITTAATSAvaeRIPGQREL 518
Cdd:pfam08118 304 KMSRLRIDGLNIDHLN--RGVEGPFGWITEGKVDMVADIMFPED-DDELSLSKVMSEIYDRIETEATSN---RYLNILEL 377
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409044709  519 AKPPLSAPSD-----QTAMPADSAEHPKIIIDIDLRFRDLKTAVPLFTADLSYANNALIRPIVAFMNANRTLIPIHSRVV 593
Cdd:pfam08118 378 AKPAISAPYDefrspEEEDSPEEDPNRYVVMDLRLRLNDVKAAVPLFTPDLSYVNNALIRPIVAYINSKRTYIPIKCRVV 457
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 409044709  594 KDLSNFDGAWTMWETGLVDDIGAKVYEAMAYHVTQANFN-RRVKAVSAWSLQMTASAILSAL 654
Cdd:pfam08118 458 KRLSDFDGSWTVYDSGLMDDISAEVYDAFARYVADDQARrRRIKKVGFWSLQLAAQALLLGL 519
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH