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Conserved domains on  [gi|440898860|gb|ELR50269|]
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hypothetical protein M91_07500, partial [Bos mutus]

Protein Classification

G protein-coupled receptor family protein; olfactory receptor subfamily 2A protein( domain architecture ID 11610383)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters| olfactory receptor (OR) subfamily 2A protein, such as human olfactory receptor 2A2 and related proteins in other mammals and sauropsids; ORs play a central role in olfaction, the sense of smell, and belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
60-337 7.14e-151

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 425.18  E-value: 7.14e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15915    1 IFLFVLFLLLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLcffhallHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALM-------HTVMTSRLPFCGPNKINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15915  154 FCDIKPLLKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPAL 233
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15915  234 FTYIRPSSGDSLEQDRIVALLYTVVTPVLNPLIYTLRN 271
 
Name Accession Description Interval E-value
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
60-337 7.14e-151

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 425.18  E-value: 7.14e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15915    1 IFLFVLFLLLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLcffhallHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALM-------HTVMTSRLPFCGPNKINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15915  154 FCDIKPLLKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPAL 233
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15915  234 FTYIRPSSGDSLEQDRIVALLYTVVTPVLNPLIYTLRN 271
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
66-348 2.12e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.71  E-value: 2.12e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860   66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPF-------LLRRLPFCGHHVLSHSYCLHMG 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  226 LLELACGTIELNE-WLLNTVTGTIAMGSfFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYI- 303
Cdd:pfam13853 154 LARLSCADIKVNNiYGLFVVTSTFGIDS-LLIVLSYG-LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMv 231
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 440898860  304 HPASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:pfam13853 232 HRFGHNVPPLLQIMmANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
60-337 7.14e-151

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 425.18  E-value: 7.14e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15915    1 IFLFVLFLLLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLcffhallHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALM-------HTVMTSRLPFCGPNKINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15915  154 FCDIKPLLKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPAL 233
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15915  234 FTYIRPSSGDSLEQDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
60-337 6.47e-123

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 354.48  E-value: 6.47e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd13954    1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLI-------GFLNSLIHTVLISQLPFCGSNVINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd13954  154 FCDIPPLLKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTI-LKIPSAEGRQKAFSTCASHLTVVSLFYGTII 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd13954  233 FMYVRPSSSYSSDLDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
60-344 1.58e-116

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 338.28  E-value: 1.58e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15225    1 LLLFVVFLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVffhallcFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15225   81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSG-------ILVSLGQTTLIFSLPFCGSNEINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15225  154 FCDIPPVLKLACADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTI-LKIPSAEGRRKAFSTCSSHLIVVTLFYGCAS 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15225  233 FTYLRPKSSYSPETDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
60-344 5.16e-110

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 321.91  E-value: 5.16e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15231    1 LLLFLIFLIIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15231   81 VSFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLC-------GFLNSAVHTVLTFRLSFCGSNQISHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15231  154 FCDIPPLLKLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTI-LKIRSAEGRRKAFSTCASHLTVVTLFYGTAI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15231  233 FNYNRPSSGYSLDKDTLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
59-344 2.11e-106

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 312.62  E-value: 2.11e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  59 QPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHF 138
Cdd:cd15235    1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 139 FHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVffhallcFFHALLHSVMSSRLNFCGSNRIHH 218
Cdd:cd15235   81 FIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLS-------HLHSLLHTLLMSRLSFCGSNEIPH 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 219 FFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPV 298
Cdd:cd15235  154 FFCDLQPLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYAR-ILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 299 DFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15235  233 IGVYFQPSSSYSADKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
60-337 9.66e-105

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 308.39  E-value: 9.66e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15918    1 QLLFGLFLGMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVffhallcFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15918   81 LLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVIT-------NLHSLLHTLLMARLSFCASNEIPHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15918  154 FCDLNPLLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAV-LRIPSAGGKWKAFSTCGSHLSVVSLFYGTVI 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15918  233 GVYLSPPSSHSASKDSVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
60-337 4.28e-103

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 304.05  E-value: 4.28e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15230    1 VPLFVLFLLIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15230   81 AVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLC-------GFVNSIVHTSSTFSLSFCGSNVINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15230  154 FCDIPPLLKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITI-LRIRSAEGRRKAFSTCASHLTAVSLFYGTLI 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15230  233 FMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
60-344 1.06e-102

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 303.36  E-value: 1.06e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15229    1 IFLFLVFLVIYLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15229   81 FFFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWAL-------GFLYALINTLLLLNLHFCGPNEINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15229  154 SCELPSLLPLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIH-IISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGF 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15229  233 FRYLRPNSASSSVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
46-347 1.96e-102

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 303.13  E-value: 1.96e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  46 EFLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHK 125
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 126 TISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMS 205
Cdd:cd15943   81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLI-------GFVNALIQTICT 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 206 SRLNFCGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCA 285
Cdd:cd15943  154 FRLPFCGSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAI-LRIHSSEGRRKAFSTCA 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 440898860 286 SHFSVVVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRV 347
Cdd:cd15943  233 SHLMAVTIFYGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRI 294
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
61-337 7.71e-99

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 293.24  E-value: 7.71e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15912    2 LLFLLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15912   82 FLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSW-------VGGFLLILPPTILVFQLPFCGPNVINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15912  155 CDSGPLLKLSCSDTRLIELLDFILASVVLLGSLLLTIVSYIYIISTI-LRIPSASGRQKAFSTCASHLTVVSIFYGSCIF 233
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15912  234 MYVRPSQSSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
47-341 1.00e-98

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 293.46  E-value: 1.00e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  47 FLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKT 126
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 127 ISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSS 206
Cdd:cd15408   81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLA-------GFLNSTVHTGFIL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 207 RLNFCGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCAS 286
Cdd:cd15408  154 RLSFCGSNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATI-LRMRSAEGRHKAFSTCAS 232
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 440898860 287 HFSVVVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVK 341
Cdd:cd15408  233 HLTAVTLFYGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
60-337 4.43e-97

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 288.61  E-value: 4.43e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15911    1 ILLFLLFLVIYIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFfhallcFFHALLHSVMsSRLNFCGSNRIHHF 219
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGF------LASTITVILM-SQLTFCGPNEIDHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15911  154 FCDFAPLLKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTI-LRIPSTTGRQKAFSTCSSHLIVVTIFYGTLI 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15911  233 IVYVVPSTNTSRDLNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
61-346 8.30e-97

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 288.45  E-value: 8.30e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15411    2 PLFVLFLVIYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15411   82 ALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAA-------GFLNSLIHTTLISRLSFCGSNVINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15411  155 CDTPPLLKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTY-ILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15411  234 TYLRPSSSYSLGQDKVASVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
47-348 3.16e-94

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 282.24  E-value: 3.16e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  47 FLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKT 126
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 127 ISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhALLCffhALLHSVMSS 206
Cdd:cd15410   81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLW----GIVC---SLIHTCGLL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 207 RLNFCGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCAS 286
Cdd:cd15410  154 RLSFCGSNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTI-LRIRSAEGRQKAFSTCAS 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 440898860 287 HFSVVVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:cd15410  233 HLTAITIFHGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
60-337 3.58e-94

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 281.26  E-value: 3.58e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15227    1 ILHFVLFLLIYLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15227   81 IFFAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLS-------GLLYGALHTANTFSLPFCGSNVIHQF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15227  154 FCDIPQLLKLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTV-LRIPSAQGRSKAFSTCLPHLIVVSLFLSTGS 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15227  233 FAYLKPPSDSPSLLDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
61-346 1.98e-93

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 279.91  E-value: 1.98e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15417    2 ILFVLFLGIYLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15417   82 GMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAY-------LGGFLNSLIQTVSMFQLSFCGPNVIDHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15417  155 CDIPPLLSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTI-LKIRSAKGRSKAFNTCASHLTAVTLFYGTGLF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15417  234 VYLRPSSSHSQDQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
61-337 6.19e-93

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 278.37  E-value: 6.19e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15232    2 LLFWLFLFLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15232   82 WSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAI-------GMLNSAVHTGLMLRLSFCGPNIINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15232  155 CEIPPLLLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSI-LRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIY 233
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15232  234 TYIRPSSSYSPEKDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
61-346 4.49e-92

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 276.50  E-value: 4.49e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15419    2 LLFLLFLVIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15419   82 LFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSY-------LCGCINSIIQTSFTFSLSFCGSNEIDHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15419  155 CDVPPLLKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTI-LRIPSAEGRKKAFSTCASHLTAVSLFYGTVFF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15419  234 MYAQPGAVSSPEQSKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
61-337 5.91e-91

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 272.95  E-value: 5.91e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15431    2 ILFVLLLIVYLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLcffhallhSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15431   82 FLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVI--------PVLTMPLHFCGPNVINHFF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEwLLNTVTGTIAM-GSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15431  154 CEVQALLKLACSDTSLNE-ILMFATSIFTLlLPFSFILVSYIRIGVAV-LRIRSAEGRRKAFSTCGSHLTVVTIFYGTAI 231
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15431  232 FMYLRPQSKSSSDQDKIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
61-337 6.86e-91

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 272.93  E-value: 6.86e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15939    2 ICFVVFLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15939   82 FFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWV-------GGFLHSTIQILLTLQLPFCGPNVIDHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSyvYIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15939  155 CDLFPLLKLACTDTYVIGLLVVANSGLICLLSFLILLIS--YIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIF 232
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPAsrSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15939  233 IYMRPV--TTFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
60-337 8.72e-91

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 272.61  E-value: 8.72e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15237    1 ILLFILFLLIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15237   81 LALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWAS-------GFLNSLVLTSLTLRLPFCGPNHINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIyLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15237  154 FCEAPAVLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILA-TILRIQSAEGRKKAFSTCASHLTVVTLFYGTAI 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15237  233 FMYMRPHSTHSPDQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
61-337 1.03e-90

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 272.57  E-value: 1.03e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15947    2 PLFVVVLIFYLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15947   82 WLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLS-------GLANSLLQTTLTLQLPLCGHHTLDHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15947  155 CEVPALIKLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAV-LRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIY 233
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15947  234 MYLQPPSSYSQDQGKFISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
62-344 1.94e-89

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 269.66  E-value: 1.94e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15429    3 LFVLFLVMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15429   83 LGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASW-------TSGFLNSLVQTAFTFRLPFCGHNTINHFSC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15429  156 ELLAVVRLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAI-LRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFT 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15429  235 YMRPRSGSSALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
61-344 3.15e-89

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 269.20  E-value: 3.15e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15420    2 LLFGLFSLLYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15420   82 ALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWA-------CGFLLALVHVVLLLRLPFCGPNEVNHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15420  155 CEILAVLKLACADTWINEILIFAGCVFILLGPFSLILISYLH-ILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15420  234 MYMVPGSSNSAEQEKILSLFYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
60-346 1.26e-88

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 267.74  E-value: 1.26e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15409    1 VPLFLVFLAIYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15409   81 GFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIG-------GFLHSMIHVGLTFRLSFCGSNEINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15409  154 FCDIPPLLKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTI-LKMKSAEGRRKAFSTCGSHLLSVSLFYGSLF 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15409  233 FMYVRPSSLYALDQDMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
60-346 1.42e-88

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 267.36  E-value: 1.42e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15415    1 VPLFMLFLLIYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15415   81 AVFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSY-------LGGLINSLTHTIGLLKLSFCGPNVINHY 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15415  154 FCDIPPLLKLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAI-LRIRSAEGRRKAFSTCASHLTAVTLFYGSVS 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15415  233 FSYIQPSSQYSLEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
61-337 2.76e-88

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 266.38  E-value: 2.76e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15226    2 FLFVFFSLFYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15226   82 FFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWII-------GFIHSLSQLAFVVNLPFCGPNVVDSFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLffKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15226  155 CDLPLVIKLACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTV--RKHSSGGSSKALSTCSAHITVVVLFFGPCIF 232
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15226  233 IYVWPFSTFPV--DKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
47-346 1.21e-87

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 265.45  E-value: 1.21e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  47 FLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKT 126
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 127 ISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSS 206
Cdd:cd15945   81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAY-------LSGMATSLVHTTLTF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 207 RLNFCGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCAS 286
Cdd:cd15945  154 RLSFCGSNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITV-LKIRSAEGRFKAFSTCAS 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 287 HFSVVVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15945  233 HLTAVGLFYGTLLFMYLRPSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
60-346 5.95e-86

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 260.79  E-value: 5.95e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15412    1 PLLFVLFLVIYLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15412   81 IALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYI-------YGFLNGLIQTILTFRLSFCGSNVINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15412  154 YCADPPLIKLSCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAI-LRIRSAEGRCKAFSTCGSHLTAVTIFYGTLF 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15412  233 CMYLRPPSEESVEQSKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
61-344 4.20e-85

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 258.63  E-value: 4.20e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15421    2 FLFSLILLIFLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15421   82 TLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSW-------LGGSLNSLIHTVYTMHFPYCGSREIHHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIyLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15421  155 CEVPALLKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILL-TVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15421  234 TYMRPGSYHSPEQDKVVSVFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
61-346 4.90e-85

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 258.45  E-value: 4.90e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15416    2 ILFVLFLVIYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCffhalLHSVMSsrLNFCGSNRIHHFF 220
Cdd:cd15416   82 TFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVF-----TTCVFS--LSFCGPNEINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15416  155 CDFPPLLKLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAI-LRIRSTEGRHKAFSTCASHLTAVTLFYGTITF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15416  234 IYVMPNSSYSMDQNKVVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
62-344 1.15e-84

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 257.38  E-value: 1.15e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTH-KTISFLGCISQLHFFH 140
Cdd:cd15916    3 LFLIFLIIYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFFH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15916   83 FLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVA-------GSLHSAIHTSLTFRLPFCGPNRIDYFF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15916  156 CDIPPLLKLACADTTINELVIFASIGVVALGCFILILLSYGN-IVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVF 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15916  235 IYLRPGSKEAL--DGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
61-348 2.78e-84

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 256.58  E-value: 2.78e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15414    2 PLFLLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15414   82 LFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVV-------GLLNTTTHTTAAFFLPFCGPNVINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15414  155 CDIPPLLSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAI-LRIRSAEGRRKAFSTCSSHLTAVSILYGTLFF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:cd15414  234 IYVRPSSSSSLDLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTI 281
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
62-337 1.57e-83

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 254.13  E-value: 1.57e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15224    3 LFLLFLIAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvMSSRLNFCGSNRIHHFFC 221
Cdd:cd15224   83 LACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVY-------FISQLSFCGPNVINHFFC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15224  156 DISPLLNLSCTDMSLAELVDFILALIILLVPLLVTVASYICIISTV-LRIPSATGRQKAFSTCASHLTVVIIFYSATLFM 234
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15224  235 YARPKAISSFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
61-344 3.13e-83

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 253.51  E-value: 3.13e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15228    2 ILFVLFLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCffhallhSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15228   82 FLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATIL-------TSLTFTLPYCGSNVVDYFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15228  155 CDIFPVLKLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISI-LKMRSAEGRRKAFSTCSSHLTVVTLFFGPCAL 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPAsrSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15228  234 IYTQPT--PSPVLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
51-348 1.16e-82

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 252.67  E-value: 1.16e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  51 GVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFL 130
Cdd:cd15406    1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 131 GCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNF 210
Cdd:cd15406   81 ECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIM-------GLIGATVHTSCMLRLSF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 211 CGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSV 290
Cdd:cd15406  154 CGDNVINHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAF-ILSSILRIRSAEGRSKAFSTCSSHLAA 232
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 440898860 291 VVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:cd15406  233 VGVFYGSIIFMYLKPSSSSSMTQEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
62-337 1.06e-81

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 249.28  E-value: 1.06e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15940    3 FFMLFLVLYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvMSSRLNFCGSNRIHHFFC 221
Cdd:cd15940   83 FACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTF-------LTIRLPYCGPNEIDSFFC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLffKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15940  156 DVPPVIKLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSL--RKRSTEGRRKALSTCASHLTVVTLFFGPCIFI 233
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 440898860 302 YIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15940  234 YTRPSTSFSE--DKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
60-344 1.18e-81

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 249.80  E-value: 1.18e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15234    1 PLLFGLFLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15234   81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLI-------SILDSLLHSLMVLQLSFCTDVEIPHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15234  154 FCELAQVLKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSI-LRIPSSGGKYKAFSTCGSHLSVVSLFYGTGL 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15234  233 GVYISSAVTHSSRKTAVASVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
60-337 8.32e-81

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 247.25  E-value: 8.32e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15936    1 FFLFLVFLLVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15936   81 HFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLG-------GFAHSIVQVALLLQLPFCGPNVLDNF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLffKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15936  154 YCDVPQVIKLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKI--RTHVTEGKRKALSTCASQITVVTLIFVPCI 231
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15936  232 YIYARPFQTFPM--DKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
61-337 1.04e-80

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 246.90  E-value: 1.04e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15430    2 LLFVLCLIMYLVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15430   82 AMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVT-------GFLNSLVETVLAMQLPFCGNNVINHFT 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15430  155 CEILAVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIF-ILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILF 233
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15430  234 MYMKPKSKNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
61-344 1.08e-80

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 247.39  E-value: 1.08e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15432    2 VLFVVFLIFYILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15432   82 GLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWIS-------GFANSLVQSTLTLKMPRCGRRRVDHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15432  155 CEVPALLKLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAV-LRIRSAEGRRKAFNTCGSHLLVVSLFYGTAIS 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15432  234 MYLQPPSNSSHDRGKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
62-346 1.47e-80

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 246.85  E-value: 1.47e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15413    3 LFGLFLVIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLT 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15413   83 FIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPY-------LYSFFVALFHTIKTFRLSFCGSNVINHFYC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15413  156 DDLPLLALSCSDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAI-LRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFM 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15413  235 YLQPKSSHSLDTDKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
60-344 3.08e-80

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 246.19  E-value: 3.08e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15424    1 ILLFVVILIIYLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSvmssrlnFCGSNRIHHF 219
Cdd:cd15424   81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHP-------FCGPNHINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15424  154 FCELPVVLKLACADTHITEAIVFGAGVLILLVPLSVILTSYG-LILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15424  233 SMYMRPRSGSTPDRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
47-348 1.14e-79

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 245.08  E-value: 1.14e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  47 FLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKT 126
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 127 ISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSS 206
Cdd:cd15944   81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSY-------LAGLVNLVIHTTATF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 207 RLNFCGSNRIHHFFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCAS 286
Cdd:cd15944  154 SLSFCGSNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAI-LRMRSAEGRRKAFSTCAS 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 440898860 287 HFSVVVLFFVPVDFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:cd15944  233 HFTGVTLFYGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
60-344 3.92e-78

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 240.74  E-value: 3.92e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15434    1 KILSVVVLIFYLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15434   81 LGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSW-------LIGFGNSLVLSPLTLSLPRCGHHRVDHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15434  154 FCEMPALIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAV-LKIKSAAGRKKAFGTCGSHLTVVSLFYGTII 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15434  233 YMYLQPKNSVSQDQGKFLTLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
60-337 9.13e-78

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 239.58  E-value: 9.13e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15914    1 LLLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWL-------CGFLGPVPEIILISTLPFCGPNQIQHI 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15914  154 FCDFPPLLSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYVKIISVV-LKIPSAEGRQKAFSTCAAHLTVVLLFFGSVS 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15914  233 FMYLRLSKSYSLDYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
61-344 2.29e-77

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 238.90  E-value: 2.29e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15236    2 VFFALFLAMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15236   82 FFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSW-------VLTCFHALLHTLLLARLSFCADNVIPHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15236  155 CDLVALLKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATI-LKVPSTKGICKAFSTCGSHLSVVFLYYGTIIG 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15236  234 VYFFPSSNNSSDKDIVASVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
62-344 1.32e-76

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 236.56  E-value: 1.32e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15942    3 LFLFFLVVYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15942   83 LGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTW-------LGGCLHSTFQTSLTFRLPYGQKNEVDYIFC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15942  156 DIPAMLKLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAI-LKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFI 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 440898860 302 YIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15942  235 YLRPGSQDPL--DGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
61-346 1.91e-75

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 233.85  E-value: 1.91e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15407    2 PLFIIFTLIYLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15407   82 VFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYV-------CGFLNASIHTGNTFRLSFCKSNVINHFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15407  155 CDIPPVLALSCSDIHISEIVLFFLASFNVFFALLVILISYLFIFITI-LRMRSAEGHQKAFSTCASHLTAVSIFYGTVIF 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 301 VYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRR 346
Cdd:cd15407  234 MYLQPSSSHSMDTDKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
62-337 2.31e-75

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 233.36  E-value: 2.31e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15913    3 LFSFFSVIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFfhalLCFfhaLLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15913   83 LGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGF----LWF---LIPVVLISQLPFCGPNIIDHFLC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15913  156 DPGPLLALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTLVLRAV-LRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVM 234
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15913  235 YVSPGSGNSTGMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
60-344 2.33e-74

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 231.22  E-value: 2.33e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15233    1 PVLFVTFLLAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15233   81 HLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISC-------ACAFTNALTHTVAMSTLKFCGPNVINHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15233  154 FCDLPPLFQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAHVVAAV-LRIRSAEGRRKAFSTCGSHLTVVCIFYGTGV 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15233  233 FSYMRLGSVYSSDKDKVIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
61-344 9.47e-73

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 227.04  E-value: 9.47e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHS-PTYFFLGNLSCLDICYSTVTLPKMLGNFLS-THKTISFLGCISQLHF 138
Cdd:cd15941    2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTlSGRTISFEGCVVQLYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 139 FHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHH 218
Cdd:cd15941   82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWAT-------GATHAAIHTSLTFRLPYCGPCQIAY 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 219 FFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPV 298
Cdd:cd15941  155 FFCDIPPVLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAV-LRIRTAEGRQRAFSTCSAHLTGVLLYYVPS 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 299 DFVYIHPasRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15941  234 VFIYLQP--SSSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
59-347 1.19e-72

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 226.97  E-value: 1.19e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  59 QPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHF 138
Cdd:cd15418    1 QLILFVVFLLSYILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 139 FHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHH 218
Cdd:cd15418   81 SAGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASY-------LGGFANAIIHTSNTFRLHFCGDNIIDH 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 219 FFCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPV 298
Cdd:cd15418  154 FFCDLPPLVKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAI-LRIHSASGRHKAFSTCSAHLTSVTLYYGSI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 440898860 299 DFVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGALRRV 347
Cdd:cd15418  233 LFIYSRPSSSHTPDRDKVVALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
62-337 3.66e-72

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 225.14  E-value: 3.66e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15938    3 LFALFLLAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCiqmavtvWIIVFFHALLCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15938   83 VGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLC-------WVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIylffKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15938  156 DVPPVIKLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTILV----TIRSTEGRRKALSTCASHLMVVTLFFGPCIFI 231
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 440898860 302 YIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15938  232 YARPFSTFPV--DKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
62-344 5.46e-72

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 224.99  E-value: 5.46e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15405    3 LFFLFLGIYVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIvffhallCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15405   83 FVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVM-------GFAGAMAHTGCMLRLTFCDSNIINHYMC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15405  156 DILPLLQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNI-LHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFM 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15405  235 YLKPSSVGSVNQGKVSSVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
60-337 1.40e-69

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 218.50  E-value: 1.40e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15946    1 SILFAVFLLIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15946   81 LALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWV-------CGVFSSLLHTFFTMRLPYCGPNEINHY 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15946  154 FCEVPAVLKLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAI-LKIRSTQGRCKAFSTCASHITVVTMFYGPAM 232
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15946  233 FMYMRPGSNYSPERDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
62-344 1.59e-68

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 216.19  E-value: 1.59e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15428    3 LFILFLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHFFC 221
Cdd:cd15428   83 FGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWV-------GGLLVSAVDTAFTLNLSFGGHNKINHFLC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15428  156 EMPALLKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTR-IIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLST 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 440898860 302 YIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15428  235 YMRPKSSTSKEYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
62-337 3.68e-67

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 212.32  E-value: 3.68e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRL-HSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15935    3 LFVLVLACYAAILLGNLLIVVTVHADPHLlQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIivffhalLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15935   83 FLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWA-------GGFLHSATQAALVLRLPFCGPNELDNFY 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLffKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15935  156 CDVPQVIKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTL--RGRFREGGGKALSTCSSHLTVVSLIFVPCIF 233
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPASRSSVdqDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15935  234 VYLRPFSSSSV--DKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
61-337 4.07e-65

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 206.90  E-value: 4.07e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15937    2 LLFVLFLLFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFfhallhsVMSSRLNFCGSNRIHHFF 220
Cdd:cd15937   82 FLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQV-------ALIIRLPFCGPNVLDNFF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLffKTHSCSMLHKALSTCASHFSVVVLFFVPVDF 300
Cdd:cd15937  155 CDITQVIKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKL--RTHSSKGKSKAASTCITHIIIVFVMFGPAIY 232
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 301 VYIHPAsrSSVDQDQIIAIMYSVVIPVLNPLIYTLRN 337
Cdd:cd15937  233 IYARPF--RSFPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
60-344 1.06e-63

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 203.87  E-value: 1.06e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15433    1 PVLFVVVLIFYLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWiivffhaLLCFFHALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15433   81 LALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISW-------LSGFVNSVAQTGLLAERPLCGHRLLDHF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15433  154 FCEMPVFLKLACGDDETTEVQMFVARVVILLLPAALILGSYGH-VAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 300 FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15433  233 YTYLQPIHRYSQAHGKFVSLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
60-344 2.19e-57

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 187.50  E-value: 2.19e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15223    1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVtvwIIVFFHALLcffhALLHSVMSSRLNFCGSNRIHHF 219
Cdd:cd15223   81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVL---FALIRSGLL----VLPIVVLASQLSYCSSNVIEHC 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15223  154 YCDHMALVSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYA-LILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVL 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 300 FVYI-HPASRS-SVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVKGAL 344
Cdd:cd15223  233 VSSLtYRFGKTiPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
66-340 1.60e-53

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 177.48  E-value: 1.60e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15917    7 FCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAvtvwIIVFFHALLCFFHALLhsvMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15917   87 ESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIG----LAILLRAVALIIPLPL---LVRRLPYCGSNVISHSYCEHMA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIELNEwlLNTVTGTIAMGSFFLTF--LSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF-VY 302
Cdd:cd15917  160 VVKLACGDTRVNS--IYGLFVALLIVGFDLLFiaLSYV-LILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFsFL 236
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 440898860 303 IHPASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15917  237 THRFGHHVPPHVHILlANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
66-340 2.91e-53

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 176.71  E-value: 2.91e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15221    7 FCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhaLLHsvmssRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15221   87 ESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVF--LLK-----RLPYCGHNVIPHTYCEHMG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF-VYIH 304
Cdd:cd15221  160 IARLACADITVNIWYGLTVALLTVGLDVVLIAVSYA-LILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFsFLTH 238
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 305 PASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15221  239 RFGRHIPRHVHILlANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
62-340 4.78e-48

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 163.06  E-value: 4.78e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15222    3 ISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHT 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVtvwIIVFFHALLCF-FHALLHsvmssRLNFCGSNRIHHFF 220
Cdd:cd15222   83 FSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGL---AIVLRSVLLLLpLPFLLK-----RLPFCHSNVLSHSY 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWL-LNTVTGTIAMGSFFLtFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVD 299
Cdd:cd15222  155 CLHQDVMKLACSDTRVNSIYgLFVVLSTMGLDSLLI-LLSYV-LILKTVLGIASREERLKALNTCVSHICAVLIFYVPMI 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 440898860 300 FV-YIHPASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15222  233 GLsMVHRFGKHASPLVHVLmANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
66-340 3.81e-46

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 158.31  E-value: 3.81e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15952    7 FCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAvtvwIIVFFHALLCFFHALLhsvMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15952   87 ESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIA----LGIVLRPLLLVLPFVF---LILRLPFCGHNIIPHTYCEHMG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIElnewlLNTVTGTIAMGSFF----LTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFV 301
Cdd:cd15952  160 IAKLACASIR-----INIIYGLFAISVLVldviLIALSYVL-ILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFS 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 440898860 302 YIHPASRSSVDQ--DQIIAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15952  234 FLTHRFGHNIPRyiHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
66-340 1.08e-45

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 157.19  E-value: 1.08e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15950    7 FCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQM--AVTVWIIVFFHALLCffhallhsvMSSRLNFCGSNRIHHFFCDV 223
Cdd:cd15950   87 ESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIglAIVLRALLFMTPLTC---------LVTSLPYCGSRVVPHSYCEH 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 224 KPLLELACGTIELNEwlLNTVTGTIAMGSFFLTFLSYVYIIIY-LFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF-V 301
Cdd:cd15950  158 MAVVKLACADPRPSS--LYSITGSTLVVGTDSAFIAVSYGLILrAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLsI 235
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 440898860 302 YIHPASRSSVDQDQI-IAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15950  236 YTQRFGQGVPPHTQVlLADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
66-340 2.82e-45

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 155.88  E-value: 2.82e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15953    7 FCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVtvwiIVFFHALLCffhALLHSVMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15953   87 ESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGL----VGLIRGVLL---ILPLPLLLSRLPFCANRIIPHTYCEHMA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLfFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYI-H 304
Cdd:cd15953  160 VVKLACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIRAV-LRLSSKKARQKALNTCTAHICVILMSYTPALFSFLtH 238
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 305 PASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15953  239 RFGQGIAPHIHIIlANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
64-340 5.32e-42

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 147.49  E-value: 5.32e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  64 VIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLG 143
Cdd:cd15951    5 IPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 144 STESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAvtvwIIVFFHALLCFfhaLLHSVMSSRLNFCGSNRIHHFFCDV 223
Cdd:cd15951   85 TMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIG----LAVVLRGGILV---SPHPFLLRRLPYCRTNIIPHTYCEH 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 224 KPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYI 303
Cdd:cd15951  158 MAVVKLACADTRVSRAYGLSVAFLVGGLDVIFIAVSYI-QILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFL 236
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 440898860 304 HPASRSSVDQ--DQIIAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15951  237 THRFGHNVPPhvHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
66-348 2.12e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.71  E-value: 2.12e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860   66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPF-------LLRRLPFCGHHVLSHSYCLHMG 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  226 LLELACGTIELNE-WLLNTVTGTIAMGSfFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYI- 303
Cdd:pfam13853 154 LARLSCADIKVNNiYGLFVVTSTFGIDS-LLIVLSYG-LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMv 231
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 440898860  304 HPASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEVKGALRRVM 348
Cdd:pfam13853 232 HRFGHNVPPLLQIMmANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
62-340 2.03e-36

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 132.68  E-value: 2.03e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd15956    3 LSLPFCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVT-----VWIIVFFHALLCffhallhsvmssRLNFCGSNRI 216
Cdd:cd15956   83 FSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLlalrgVAIVIPFPLLVC------------RLSFCASHTI 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 217 HHFFCDVKPLLELACGTIELNEwlLNTVTGTIAMGSFFLTFLSYVY-IIIYLFFKTHSCSMLHKALSTCASHFSVVVLFF 295
Cdd:cd15956  151 AHTYCEHMAVVKLACGATTVDS--LYGLALALFIGGGDVLFIAYSYgLIVKTVLRLPSPEARGKAFSTCSAHICVILFFY 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 296 VPVDFVYIHPASRSSVDQDQ--IIAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15956  229 IPGLLSVLMHRFGHSVPSAAhvLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
66-341 2.53e-36

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 132.72  E-value: 2.53e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15948    8 FCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIM 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVC--IQMAVTVWIIVFFHALlcffhallhSVMSSRLNFCGSNRIHHFFCDV 223
Cdd:cd15948   88 ESAVLLAMAFDRYVAICNPLRYATILTNSVItkIGLAALARAVTLMTPL---------PFLLRRLPYCRSHVIAHCYCEH 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 224 KPLLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYiIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDF-VY 302
Cdd:cd15948  159 MAVVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVF-ILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLsST 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 440898860 303 IHPASRSSVDQDQII-AIMYSVVIPVLNPLIYTLRNKEVK 341
Cdd:cd15948  238 MHRFARHVAPHVHILlANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
45-341 5.38e-33

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 124.12  E-value: 5.38e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  45 TEFLLLGVTDIQVLQPVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTH 124
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 125 KTISFLGCISQLHFFHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFfhallhsVM 204
Cdd:cd15949   82 NEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLP-------LL 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 205 SSRLNFCGSNRIHHFFCDVKPLLELACGTIELNEwLLNTVTG--TIAMGSFFLTfLSYVYIIIYLFFKTHSCSMLhKALS 282
Cdd:cd15949  155 VRRLPWYRTNIIAHSYCEHMAVVGLACGDVSINN-HYGLTIGflVLIMDSLFIV-LSYIMILRVVQRLATSEARL-KTFG 231
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 440898860 283 TCASHFSVVVLFFVPVDF-VYIHPASRSSVDQDQI-IAIMYSVVIPVLNPLIYTLRNKEVK 341
Cdd:cd15949  232 TCVSHVCAILAFYVPIAVsSLIHRFGQNVPPPTHIlLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
66-340 1.26e-29

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 114.54  E-value: 1.26e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15954    7 FCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCiqmaVTVWIIVFFHALLCffhALLHSVMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15954   87 ESGVLMLMALDRYVAICYPLRYATILTNPVI----TKAGLATFLRGVML---IIPFPLLTKRLPYCRGNFIPHTYCDHMS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVyIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYI-- 303
Cdd:cd15954  160 VVKLACANIRVDAIYGLMVALLIGGFDILCISVSYA-MILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFah 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 440898860 304 -----HPASRSSVdqdqIIAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15954  239 rfgghHITPHIHI----IMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
66-340 5.53e-27

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 107.55  E-value: 5.53e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  66 FLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGST 145
Cdd:cd15955    7 FCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsVMSSRLNFCGSNRIHHFFCDVKP 225
Cdd:cd15955   87 ESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPL------LIKLRLHHFRSTVISHSYCEHMA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 226 LLELACGTIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFFKTHSCSMLhKALSTCASHFSVVVLFFVPVDFVY-IH 304
Cdd:cd15955  161 VVKLAADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARL-KAFNTCTAHIFVFLLFYTLAFFSFfAH 239
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 440898860 305 PASRSSVDQDQI-IAIMYSVVIPVLNPLIYTLRNKEV 340
Cdd:cd15955  240 RFGHHVAPYVHIlLSNLYLLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
76-333 9.01e-27

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 106.23  E-value: 9.01e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860   76 GNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLST-HKTISFLGCISQLHFFHFLGSTESMLLAMMG 154
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHgDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  155 FDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVmssrlnfcgsNRIHHFFCDVKPLLELACgti 234
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTV----------PEGNVTVCFIDFPEDLSK--- 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  235 elNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFF------KTHSCSMLHKALSTCASHFSVVVLFFVPVDFVYIHPASR 308
Cdd:pfam00001 148 --PVSYTLLISVLGFLLPLLVILVCYTLIIRTLRKsaskqkSSERTQRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLA 225
                         250       260       270
                  ....*....|....*....|....*....|.
gi 440898860  309 SSVDQDQII------AIMYSVVIPVLNPLIY 333
Cdd:pfam00001 226 LDCELSRLLdkalsvTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
62-337 5.25e-16

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 76.94  E-value: 5.25e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHF 141
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 142 LGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvmssrlnfcGSNRIHHFFC 221
Cdd:cd00637   81 SLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLL---------------GWGVYDYGGY 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 222 DVkpllelaCGTIELNEWLLNTVTGTIAMGSFF--LTFLSYVYIIIYLFFKTHSCSMLHKALSTCASH------------ 287
Cdd:cd00637  146 CC-------CCLCWPDLTLSKAYTIFLFVLLFLlpLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRrrrrerkvtktl 218
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 440898860 288 FSVVVLFFV---PVDFVYIHPASRSSVDQDQIIAIMYSVVI----PVLNPLIYTLRN 337
Cdd:cd00637  219 LIVVVVFLLcwlPYFILLLLDVFGPDPSPLPRILYFLALLLaylnSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
61-344 2.81e-15

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 74.52  E-value: 2.81e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISqLHFFH 140
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRF-WIALD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFhallhsvmssrlnfcgSNRIHHF 219
Cdd:cd14967   80 VLCCTASILnLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLV----------------GWRDETQ 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 220 FCDVKPLLELacgtielneWLLNTVTGTIAMGSFFLTFL--SYVYIIIYLFFKTHscsmlHKALSTcashFSVVVLFFV- 296
Cdd:cd14967  144 PSVVDCECEF---------TPNKIYVLVSSVISFFIPLLimIVLYARIFRVARRE-----LKAAKT----LAIIVGAFLl 205
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 440898860 297 ---PVDFVYIhpaSRSSVDQDQIIAIMYSVVIPV------LNPLIYTLRNKEVKGAL 344
Cdd:cd14967  206 cwlPFFIIYL---VSAFCPPDCVPPILYAVFFWLgylnsaLNPIIYALFNRDFRRAF 259
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
61-196 7.74e-08

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 52.98  E-value: 7.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIV-SLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd14969    1 YVLAVYLSLIGVlGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTvWIIVFFHALLCFF 196
Cdd:cd14969   81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFI-WLYGLFWALPPLF 136
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
62-196 6.34e-07

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 50.27  E-value: 6.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  62 LFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTvTLPKMLGNFLSTHKTISFLGCisqlHFFHF 141
Cdd:cd15079    3 LGFIYIFLGIVSLLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFLMMI-KMPIFIYNSFYEGWALGPLGC----QIYAF 77
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 440898860 142 LGS----TESMLLAMMGFDRFVAMCKPLHYTLiMNHQVCIQMAVTVWIIVFFHALLCFF 196
Cdd:cd15079   78 LGSlsgiGSIWTNAAIAYDRYNVIVKPLNGNP-LTRGKALLLILFIWLYALPWALLPLL 135
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
72-184 4.05e-06

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 47.84  E-value: 4.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  72 VSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTI-SFLGCISqLHFFHFLGSTES-ML 149
Cdd:cd15005   13 VSLAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPFVMASVRHGSGWIyGALSCKV-IAFLAVLFCFHSaFT 91
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 440898860 150 LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVW 184
Cdd:cd15005   92 LFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAW 126
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
61-186 4.21e-06

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 47.82  E-value: 4.21e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15012    1 IFIILYTLVFCCCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVHS 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWII 186
Cdd:cd15012   81 LSYTASIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLT 126
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
61-189 5.10e-06

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 47.59  E-value: 5.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTH--------KTISFLGC 132
Cdd:cd14993    2 VLIVLYVVVFLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPwvfgevlcKAVPYLQG 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 440898860 133 ISQlhffhflgSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFF 189
Cdd:cd14993   82 VSV--------SASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAII 130
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
60-197 8.45e-06

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 46.96  E-value: 8.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHK-TISFLGCISQLHF 138
Cdd:cd14979    1 VLVTAIYVAIFVVGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPwAFGDGGCKLYYFL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 440898860 139 FHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFH 197
Cdd:cd14979   81 FEACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFL 139
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
61-343 1.15e-05

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 46.34  E-value: 1.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15063    2 ISLLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVDV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFhalLCFfhallhsvmssrLNFCGSNRIHHFF 220
Cdd:cd15063   82 WMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFV---ICF------------PPLVGWNDGKDGI 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLELACGTIELNEWLLNTVTgtiAMGSFFL--TFLSYVYIIIYlffktHSCSMLHKALSTCASHFSVVVLFFVPV 298
Cdd:cd15063  147 MDYSGSSSLPCTCELTNGRGYVIYS---ALGSFYIpmLVMLFFYFRIY-----RAARMETKAAKTVAIIVGCFIFCWLPF 218
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 440898860 299 DFVYIHPAsrssVDQDQIIAIMYSVVI------PVLNPLIYTLRNKEVKGA 343
Cdd:cd15063  219 FTVYLVRA----FCEDCIPPLLFSVFFwlgycnSALNPCIYALFSRDFRFA 265
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
64-193 2.11e-05

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 45.36  E-value: 2.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  64 VIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLG 143
Cdd:cd14972    3 VVAIVLGVFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLL 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 440898860 144 STESMLLAmMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALL 193
Cdd:cd14972   83 ASAYSLLA-IAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALL 131
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
71-197 3.90e-05

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 44.93  E-value: 3.90e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  71 IVSLAGNgAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFL-STHKTISFLGCISQLHFFHFLGSTESM- 148
Cdd:cd14978   12 IFGIIGN-ILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIaDYSSSFLSYFYAYFLPYIYPLANTFQTa 90
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 440898860 149 ---LLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFH 197
Cdd:cd14978   91 svwLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFE 142
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
60-343 4.57e-05

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 44.23  E-value: 4.57e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLAtyIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLP-KMLGNFLSTHKTISFLGCISQLHF 138
Cdd:cd15052    3 AALLLLLLV--IATIGGNILVCLAISLEKRLQNVTNYFLMSLAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 139 FHFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVMSSRLNFCGSNRIHH 218
Cdd:cd15052   81 DVLFCTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDTTNVLNNGTCVLFNPNF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 219 ffcdvkpllelacgtielnewllntvtgtIAMGSFFLTFLSYVYIIIYLFFKTHSCSMLHKALSTCASHFSVVVLFFVPV 298
Cdd:cd15052  161 -----------------------------VIYGSIVAFFIPLLIMVVTYALTIRLLSNEQKASKVLGIVFAVFVICWCPF 211
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 440898860 299 DFVYIHPASRSSVDQdQIIAIMYSVVI------PVLNPLIYTLRNKEVKGA 343
Cdd:cd15052  212 FITNILTGLCEECNC-RISPWLLSVFVwlgyvsSTINPIIYTIFNKTFRRA 261
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
61-185 5.42e-05

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 44.27  E-value: 5.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATyivsLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15067    5 VLSLFCLVT----VAGNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTGGYWLFGRDWCDVWHSFD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 141 FLGSTESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWI 185
Cdd:cd15067   81 VLASTASILnLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWI 126
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
63-188 6.17e-05

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 43.80  E-value: 6.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  63 FVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISqLHFFHFL 142
Cdd:cd15001    3 IIVYVITFVLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKA-VAYLQLL 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 143 GSTESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF 188
Cdd:cd15001   82 SFICSVLtLTAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSA 128
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
61-185 9.11e-05

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 43.48  E-value: 9.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCisQLHFF- 139
Cdd:cd15083    2 VLGIFILIIGLIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGC--DMYGFs 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 140 -HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWI 185
Cdd:cd15083   80 gGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWL 126
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
71-193 1.68e-04

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 42.80  E-value: 1.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  71 IVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCisQLHFFH--FLGSTESM 148
Cdd:cd15073   12 IISTISNGIVLVTFVKFRELRTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGC--QWYAFLniFFGMASIG 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 440898860 149 LLAMMGFDRFVAMCKPLHYTLiMNHQVCIQMAVTVWIIVFFHALL 193
Cdd:cd15073   90 LLTVVAVDRYLTICRPDLGRK-MTTNTYTVMILLAWTNAFFWAAM 133
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
61-198 2.04e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 42.43  E-value: 2.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNgaiLMVVISDS---RLHSPTYFFLGNLSCLDICYSTVTLP-KML---------GNFLST-HKT 126
Cdd:cd15317    2 IIYIVLVLAMLITVSGN---LVVIISIShfkQLHSPTNMLVLSLATADFLLGLCVMPfSMIrtvetcwyfGDLFCKfHTG 78
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 440898860 127 ISFLGCISQLhfFHflgstesmlLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHA 198
Cdd:cd15317   79 LDLLLCTTSI--FH---------LCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWLVPGIYTFGLIYTG 139
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
61-196 2.13e-04

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 42.34  E-value: 2.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNgaiLMVVISDS---RLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCisQLH 137
Cdd:cd15312    2 AMYLFMAGAILLTVFGN---LMVIISIShfkQLHSPTNFLILSLAITDFLLGFLVMPYSMVRSVESCWYFGDLFC--KIH 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 440898860 138 F-FHFLGSTESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFF 196
Cdd:cd15312   77 SsLDMMLSTTSIFhLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFGVVF 137
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
64-193 2.48e-04

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 42.08  E-value: 2.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  64 VIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYStvtLPKMLGNFLSTHKTISFLG-----------C 132
Cdd:cd15350    5 EVFFTIAAVGLLENLLVLVAVIKNKNLHSPMYFFICSLAVSDMLGS---LYKTLENILIILADMGYLNrrgpfetklddI 81
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 133 ISQLHFFHFLGSTESMLlaMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVW---------IIVFFHALL 193
Cdd:cd15350   82 MDSLFCLSLLGSIFSIL--AIAADRYITIFHALRYHNIMTMRRTLVILAIIWtfcggsgilMILFFHFVA 149
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
61-211 3.90e-04

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 41.68  E-value: 3.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCiSQLHFFH 140
Cdd:cd14971    2 IVPLFFALIFLLGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMC-KFVHYFQ 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 440898860 141 FLGSTESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVMSSRLNFC 211
Cdd:cd14971   81 QVSMHASIFtLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVLALHRLRNYTPGNRTVC 152
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
61-188 5.00e-04

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 41.13  E-value: 5.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYsTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd14970    2 VIPAVYSVVCVVGLTGNSLVIYVILRYSKMKTVTNIYILNLAVADELF-LLGLPFLATSYLLGYWPFGEVMCKIVLSVDA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF 188
Cdd:cd14970   81 YNMFTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSL 128
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
63-196 5.01e-04

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 41.47  E-value: 5.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  63 FVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPkmLGNFLSTHKTISFLGCISQLHFFHFL 142
Cdd:cd14968    4 IVLEVLIAVLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIP--LAILISLGLPTNFHGCLFMACLVLVL 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 440898860 143 gsTESMLLAMMGF--DRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFF 196
Cdd:cd14968   82 --TQSSIFSLLAIaiDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMF 135
7tmA_SREB2_GPR85 cd15218
super conserved receptor expressed in brain 2 (or GPR85), member of the class A family of ...
72-186 5.08e-04

super conserved receptor expressed in brain 2 (or GPR85), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320346 [Multi-domain]  Cd Length: 330  Bit Score: 41.56  E-value: 5.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  72 VSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLS---------THKTISFLGCISQLHffhfl 142
Cdd:cd15218   13 VSVVGNLLISILLVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFTSVKNgstwtygtlTCKVIAFLGVLSCFH----- 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 440898860 143 gstESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWII 186
Cdd:cd15218   88 ---TAFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTL 128
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
61-341 6.30e-04

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 41.07  E-value: 6.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGnfLSTHKTISFLGCISQLHFFH 140
Cdd:cd15069    2 TYVALELIIAALSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAIT--ISLGFCTDFHSCLFLACFVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVMSSRLNFCGSNRIHHFF 220
Cdd:cd15069   80 VLTQSSIFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGLTPFLGWNKAMSATNNSTNPADHGTNHSC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 221 CDVKPLLElacgtielnewllNTVTGT-IAMGSFF------LTFLSYVYIIIYLF---------FKTHSCSMLHKALSTC 284
Cdd:cd15069  160 CLISCLFE-------------NVVPMSyMVYFNFFgcvlppLLIMLVIYIKIFLVacrqlqrteLMDHSRTTLQREIHAA 226
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 440898860 285 ASHFSVVVLF---FVPVDFV----YIHPA-SRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVK 341
Cdd:cd15069  227 KSLAIIVGIFalcWLPVHILncitLFQPEfSKSKPKWAMNVAILLSHANSVVNPIVYAYRNRDFR 291
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
61-213 7.34e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 40.67  E-value: 7.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPK----------MLGNFLSthKTISFL 130
Cdd:cd15203    2 ILILLYGLIIVLGVVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPFtliytltknwPFGSILC--KLVPSL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 131 GCISqLHFfhflgSTESmlLAMMGFDRFVAMCKPLHYtlIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVMSSRLNF 210
Cdd:cd15203   80 QGVS-IFV-----STLT--LTAIAIDRYQLIVYPTRP--RMSKRHALLIIALIWILSLLLSLPLAIFQELSDVPIEILPY 149

                 ...
gi 440898860 211 CGS 213
Cdd:cd15203  150 CGY 152
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
72-186 1.98e-03

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 39.55  E-value: 1.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  72 VSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLS-THKTISFLGC-----ISQLHFFHflgst 145
Cdd:cd15217   13 VSLAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVSIRNgSAWTYSVLSCkivafMAVLFCFH----- 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 440898860 146 ESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWII 186
Cdd:cd15217   88 AAFMLFCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTL 128
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
64-188 2.43e-03

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 39.18  E-value: 2.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  64 VIFLATYIVSLA---GNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd17790    2 LIVITTGILSLVtvtGNLLVLISFKVNSELKTVNNYFLLSLACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALDY 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF 188
Cdd:cd17790   82 VASNASVMNLLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISF 129
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
61-341 2.44e-03

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 39.15  E-value: 2.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGnfLSTHKTISFLGCISQLHFFH 140
Cdd:cd15068    2 VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF---FHALLCFFHALLHSVMSSRLNFCGSNRIH 217
Cdd:cd15068   80 VLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFaigLTPMLGWNNCGQPKEGKNHSQGCGEGQVA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 218 HFFCDVKPLLELacgtIELNEWLLNTVTGTIAMGSFFLTFLSYVYIIIYLFFKT----HSCSMLHKALSTCASHFSVVVL 293
Cdd:cd15068  160 CLFEDVVPMNYM----VYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPlpgeRARSTLQKEVHAAKSLAIIVGL 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 440898860 294 F---FVPVD----FVYIHPASRSSVDQDQIIAIMYSVVIPVLNPLIYTLRNKEVK 341
Cdd:cd15068  236 FalcWLPLHiincFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFR 290
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
71-197 3.57e-03

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 38.80  E-value: 3.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  71 IVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGSTESMLL 150
Cdd:cd15074   12 ILSTLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFLFGCCSINTL 91
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 440898860 151 AMMGFDRFVAMCKPLHYTLIMNHQVCIqMAVTVWIIVFFHALLCFFH 197
Cdd:cd15074   92 TAISIYRYLKICHPPYGPKLSRRHVCI-VIVAIWLYALFWAVAPLVG 137
7tmA_Kappa_opioid_R cd15091
opioid receptor subtype kappa, member of the class A family of seven-transmembrane G ...
60-165 5.52e-03

opioid receptor subtype kappa, member of the class A family of seven-transmembrane G protein-coupled receptors; The kappa-opioid receptor binds the opioid peptide dynorphin as the primary endogenous ligand. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320219 [Multi-domain]  Cd Length: 282  Bit Score: 38.01  E-value: 5.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  60 PVLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTvTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15091    1 VIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTT-TMPFQSTVYLMNSWPFGDVLCKIVISID 79
                         90       100
                 ....*....|....*....|....*.
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPL 165
Cdd:cd15091   80 YYNMFTSIFTLTMMSVDRYIAVCHPV 105
7tmA_GPR83 cd15389
G protein-coupled receptor 83, member of the class A family of seven-transmembrane G ...
71-192 6.13e-03

G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR83, also known as GPR72, is widely expressed in the brain, including hypothalamic nuclei which is involved in regulating energy balance and food intake. The hypothalamic expression of GPR83 is tightly regulated in response to nutrient availability and is decreased in obese mice. A recent study suggests that GPR83 has a critical role in the regulation of systemic energy metabolism via ghrelin-dependent and ghrelin-independent mechanisms. GPR83 shares a significant amino acid sequence identity with the tachykinin receptors, however its endogenous ligand is unknown.


Pssm-ID: 320511 [Multi-domain]  Cd Length: 285  Bit Score: 38.09  E-value: 6.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  71 IVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTH----KTISFLGCISQLHFFHflgsTE 146
Cdd:cd15389   12 VISLFGNSLVCHVIFKNKRMHTATNLFIVNLAVSDILITLLNTPFTLVRFVNSTwvfgKIMCHLSRFAQYCSVY----VS 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 147 SMLLAMMGFDRFVAMCKPLHYTliMNHQVCIQMAVTVWIIVFFHAL 192
Cdd:cd15389   88 TLTLTAIALDRHRVILHPLKPR--ITPCQGVVVIAIIWIMASCLSL 131
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
61-214 6.94e-03

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 37.72  E-value: 6.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLATYIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTH---------KTISFLG 131
Cdd:cd15392    2 IIILMYSTIFVLAVGGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFIALLILQywpfgefmcPVVNYLQ 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860 132 CISQLhffhflgsTESMLLAMMGFDRFVAMCKPLhyTLIMNHQVCIQMAVTVWIIVFFHALLCFFHALLHSVMSSRLN-- 209
Cdd:cd15392   82 AVSVF--------VSAFTLVAISIDRYVAIMWPL--RPRMTKRQALLLIAVIWIFALATALPIAITSRLFEDSNASCGqy 151

                 ....*
gi 440898860 210 FCGSN 214
Cdd:cd15392  152 ICTES 156
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
65-196 7.90e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 37.72  E-value: 7.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  65 IFLATYIV-SLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFfHFLG 143
Cdd:cd15065    4 IFLSLIIVlAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVNDLLGYWLFGETFCNIWISF-DVMC 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 440898860 144 STESML-LAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVFFHALLCFF 196
Cdd:cd15065   83 STASILnLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLPIH 136
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
71-188 8.11e-03

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 37.64  E-value: 8.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  71 IVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFHFLGSTESMLL 150
Cdd:cd15297   12 LVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNL 91
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 440898860 151 AMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF 188
Cdd:cd15297   92 LIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSF 129
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
61-188 8.96e-03

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 37.45  E-value: 8.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  61 VLFVIFLAT-YIVSLAGNGAILMVVISDSRLHSPTYFFLGNLSCLDICYsTVTLPKMLGNFLSTHKTISFLGCISQLHFF 139
Cdd:cd15094    1 LISAVLYGLiCIVGLVGNGLVIYVVLRYAKMKTVTNLYILNLAVADECF-LIGLPFLIVTMILKYWPFGAAMCKIYMVLT 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 440898860 140 HFLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWIIVF 188
Cdd:cd15094   80 SINQFTSSFTLTVMSADRYLAVCHPIRSMRYRTPFIAKVVCATTWSISF 128
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
64-186 9.20e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 37.49  E-value: 9.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440898860  64 VIFLATYIVSLAGNGAILMVVIS---DSRLHSPTYFFLGNLSCLDICYSTVTLPKMLGNFLSTHKTISFLGCISQLHFFH 140
Cdd:cd15301    2 LIVIVAAVLSLVTVGGNVMVMISfkiDKQLQTISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAIDY 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 440898860 141 FLGSTESMLLAMMGFDRFVAMCKPLHYTLIMNHQVCIQMAVTVWII 186
Cdd:cd15301   82 LASNASVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAWII 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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