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Conserved domains on  [gi|444280204|gb|ELU85577|]
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hypothetical protein PNI0360_02172 [Streptococcus pneumoniae PNI0360]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
accessory_MacP NF038277
cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus ...
 12-100 1.09e-30

cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus pneumoniae as a partner protein to the cell wall synthase PBP2a, required for its activity.


:

Pssm-ID: 468445  Cd Length: 98  Bit Score: 104.64  E-value: 1.09e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 444280204  12 MGKSLLTDEMIERANRGEKISGPPLLDDNEETKILPTSSSRFGYANPKDHGFSQEtlkiqvEPSIHKSRRIENTKRNVFN 91
Cdd:NF038277   1 MGKPLLTDEEIERANRGEDIEEERLQDEDQETKIYEKEDSEKEISNFYRKELKKN------EKPITKSRRIENAKRREFQ 74


                 ....*....
gi 444280204  92 SKLNKILFA 100
Cdd:NF038277  75 SKLNKILII 83
 
Name Accession Description Interval E-value
accessory_MacP NF038277
cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus ...
 12-100 1.09e-30

cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus pneumoniae as a partner protein to the cell wall synthase PBP2a, required for its activity.


Pssm-ID: 468445  Cd Length: 98  Bit Score: 104.64  E-value: 1.09e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 444280204  12 MGKSLLTDEMIERANRGEKISGPPLLDDNEETKILPTSSSRFGYANPKDHGFSQEtlkiqvEPSIHKSRRIENTKRNVFN 91
Cdd:NF038277   1 MGKPLLTDEEIERANRGEDIEEERLQDEDQETKIYEKEDSEKEISNFYRKELKKN------EKPITKSRRIENAKRREFQ 74


                 ....*....
gi 444280204  92 SKLNKILFA 100
Cdd:NF038277  75 SKLNKILII 83
 
Name Accession Description Interval E-value
accessory_MacP NF038277
cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus ...
 12-100 1.09e-30

cell wall synthase accessory phosphoprotein MacP; MacP was characterized in Streptococcus pneumoniae as a partner protein to the cell wall synthase PBP2a, required for its activity.


Pssm-ID: 468445  Cd Length: 98  Bit Score: 104.64  E-value: 1.09e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 444280204  12 MGKSLLTDEMIERANRGEKISGPPLLDDNEETKILPTSSSRFGYANPKDHGFSQEtlkiqvEPSIHKSRRIENTKRNVFN 91
Cdd:NF038277   1 MGKPLLTDEEIERANRGEDIEEERLQDEDQETKIYEKEDSEKEISNFYRKELKKN------EKPITKSRRIENAKRREFQ 74


                 ....*....
gi 444280204  92 SKLNKILFA 100
Cdd:NF038277  75 SKLNKILII 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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