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L-carnitine/gamma-butyrobetaine antiporter [Escherichia coli P0305260.6]
Protein Classification
L-carnitine/gamma-butyrobetaine antiport BCCT transporter ( domain architecture ID 10011918 )
L-carnitine/gamma-butyrobetaine antiporter catalyzes the exchange of L-carnitine for gamma-butyrobetaine and related betaines
List of domain hits
Name
Accession
Description
Interval
E-value
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
1-504
0e+00
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 850.18
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 1 MKNEK R KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
Cdd:PRK03356 1 MKNEK K KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 81 N E P PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF A YF 160
Cdd:PRK03356 81 D E K PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF G YF 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 161 FFVRKM E VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
Cdd:PRK03356 161 FFVRKM D VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV S G A SFIMNYFTDSVGMLLMYLPRMLFYTDPI A KGGFPQGWTVFY 320
Cdd:PRK03356 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV G G T SFIMNYFTDSVGMLLMYLPRMLFYTDPI G KGGFPQGWTVFY 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL I DKNIINIPNLIEQYGVARAIIETWAA 400
Cdd:PRK03356 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL M DKNIINIPNLIEQYGVARAIIETWAA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 401 LPLSTATMWGFFILCFIATVTL V NACSYTLAMSTCREVRDGEEPPLLVRIGW A ILVGIIGIVLLALGGL N PIQTAIIAGG 480
Cdd:PRK03356 401 LPLSTATMWGFFILCFIATVTL I NACSYTLAMSTCREVRDGEEPPLLVRIGW S ILVGIIGIVLLALGGL K PIQTAIIAGG 480
490 500
....*....|....*....|....
gi 477355183 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
Cdd:PRK03356 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
Name
Accession
Description
Interval
E-value
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
1-504
0e+00
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 850.18
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 1 MKNEK R KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
Cdd:PRK03356 1 MKNEK K KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 81 N E P PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF A YF 160
Cdd:PRK03356 81 D E K PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF G YF 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 161 FFVRKM E VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
Cdd:PRK03356 161 FFVRKM D VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV S G A SFIMNYFTDSVGMLLMYLPRMLFYTDPI A KGGFPQGWTVFY 320
Cdd:PRK03356 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV G G T SFIMNYFTDSVGMLLMYLPRMLFYTDPI G KGGFPQGWTVFY 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL I DKNIINIPNLIEQYGVARAIIETWAA 400
Cdd:PRK03356 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL M DKNIINIPNLIEQYGVARAIIETWAA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 401 LPLSTATMWGFFILCFIATVTL V NACSYTLAMSTCREVRDGEEPPLLVRIGW A ILVGIIGIVLLALGGL N PIQTAIIAGG 480
Cdd:PRK03356 401 LPLSTATMWGFFILCFIATVTL I NACSYTLAMSTCREVRDGEEPPLLVRIGW S ILVGIIGIVLLALGGL K PIQTAIIAGG 480
490 500
....*....|....*....|....
gi 477355183 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
Cdd:PRK03356 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
52-501
0e+00
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 543.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 52 GWA FEWYMVVM L FGWFWLV F GP Y A K K RLG -- N E P PEFST A SW IF M M FA SCTS A AVL FWG SI E IYY Y IS TPPFG LE P N ST G 129
Cdd:TIGR00842 1 GWA YILTVTLF L GFVLYIA F SR Y G K I RLG rd D E K PEFST L SW LA M L FA AGMG A GLM FWG VA E PLT Y YL TPPFG AG P T ST T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 130 A K E LG LAY S LFHWG PL PWA T Y SFLSV A F AYF F F v RK MEVI R P SS T LVPL V GEK h AK G LF G TIV D NFY LVA LI F AMG TSLG 209
Cdd:TIGR00842 81 A Q E QA LAY T LFHWG IH PWA I Y ALVGL A L AYF H F - RK GLPL R L SS A LVPL L GEK - VN G PI G KAI D ILA LVA TV F GVA TSLG 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 210 L AT P LVTECMQW LFGIP HTLQ L D A I II T C WII L NA I C VA C G LQ KG VR I A S DVRSY L S FL M L GW V F IV SGAS F IM N Y F T DS 289
Cdd:TIGR00842 159 L GA P QINAGLSA LFGIP DSFW L Q A L II L C VTA L AC I S VA S G VG KG IK I L S NINMA L A FL L L LF V L IV GPTV F LL N S F V DS 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 290 V G ML L MYL P R M L F Y TDP - IA KGG F P Q GWTVFYWAWW VIYAIQMSI F L ARISRGRT V RE LC FG MV LG L TA S TW ILWT V L G S 368
Cdd:TIGR00842 239 I G NY L QNF P Q M S F R TDP d DG KGG W P G GWTVFYWAWW ISWSPFVGM F I ARISRGRT I RE FI FG VL LG P TA F TW LWFS V F G N 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 369 NT LLL IDKN - I IN I P NLI E QY G v ARA IIETW AALPL S T A TM WGFF IL CF I ATV T LVNAC S YT LA MS T C R EVRD GEEPP LL 447
Cdd:TIGR00842 319 SA LLL QQNG g F IN G P FVV E TN G - ARA LFGLL AALPL G T I TM ALAL IL II I FFI T SADSA S LV LA NT T S R GGQL GEEPP KW 397
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 477355183 448 VR IG WA ILV G I I GI VLL AL GG - L NPI QT AI I AGGC P LF FV NIM V TL S F IKD A KQ N 501
Cdd:TIGR00842 398 VR VF WA VAI G L I AL VLL FS GG s L AAL QT TT I IAAL P FS FV MLV V MF S L IKD L KQ D 452
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
2-500
1.66e-154
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 449.98
E-value: 1.66e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 2 KN EK R K TG I E P K VF F P PLIIVGILCWLTVRDLD AA NV V I NA V FS YV T NVW GW AFEWYMVVMLFGWFW L V F GP Y A K K RLG - 80
Cdd:COG1292 5 NK EK F K KK I D P P VF I P SALLILAFVLWGLLFPE AA GA V L NA A FS WI T TNF GW FYLLLVLLFVVFCLY L A F SK Y G K I RLG g 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 81 - NEP PEFST A SW IF M M F ASCTSAAVL FWG SI E IY Y YIST PP F G L EP N S TG A KELGL AY SL FHWG PLP WA T Y SFLSV A F AY 159
Cdd:COG1292 85 d DAK PEFST F SW FA M L F SAGMGIGLV FWG VA E PL Y HFLS PP P G V EP G S PE A ARWAM AY TF FHWG LHA WA I Y ALVGL A L AY 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 160 F FFV R KMEV i RP SS T L V PL V G EK h AK G LF G TIV D NFYLV A LI F AMG TSLGL ATPLVTECMQW LFGIP HT L QLDA III TCW 239
Cdd:COG1292 165 F AYR R GLPL - TI SS A L Y PL L G DR - IY G PI G KVI D ILAVF A TV F GVA TSLGL GALQINAGLNY LFGIP NS L TVQI III AVI 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 240 II L NA I CVAC GL Q KG VRIA S DVRSY L SF L M L GW V F IV SGAS FI M N Y F TD S V G ML L MYLPR M LFY TD PIAKG G FPQ GWTVF 319
Cdd:COG1292 243 TA L FT I SAVS GL D KG IKRL S NLNMV L AL L L L LF V L IV GPTL FI L N L F VQ S L G DY L QNFVP M SLW TD AYGDT G WLG GWTVF 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 320 YWAWW VIY A IQMSI F L ARISRGRT V RE LCF G MV L GL T AS T WILWT V L G SNTLL L IDKNIINIPNLIEQ y GV AR A IIETWA 399
Cdd:COG1292 323 YWAWW IAW A PFVGL F I ARISRGRT I RE FVL G VL L VP T LF T FLWFS V F G GTAIH L ELNGGGDLAEAVAA - GV EA A LFALLE 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 400 A LPL S T ATMWGFF IL CF I AT VT LVNAC S YT LAM S T C rev RDG EEPP LLV RI G W AI L V G IIGI VLL AL GGL NPI QTA I I AG 479
Cdd:COG1292 402 Q LPL G T ILSVLAI IL VI I FF VT SADSG S LV LAM L T S --- GGD EEPP RWQ RI F W GV L I G LVAA VLL LA GGL SAL QTA S I IT 478
490 500
....*....|....*....|.
gi 477355183 480 GC P LF FV NIMVTL S FI K DAKQ 500
Cdd:COG1292 479 AL P FS FV LLLMCV S LV K ALRE 499
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
14-500
9.21e-127
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 378.03
E-value: 9.21e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 14 VF FPPLIIVGILCW L TVRDLD A ANV V I N AVFSYV T NVW GW AFEWYMVVM L FGWFW L V F GP Y AKK RLG -- NEP PEFST A SW 91
Cdd:pfam02028 1 VF AVSAGLILAFVL L GLIFPE A LSA V V N TALDWI T DNF GW FYLLLVLIF L VFALF L A F SR Y GNI RLG gd DDK PEFST F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 92 IF M M FA SCTSAAVL FWG SI E IYYYIST PP F G L EP NSTG A KELGL AY SL FHWG PLP WA T Y SFLSV A F AYF FFVRKM e VIRP 171
Cdd:pfam02028 81 FA M L FA AGMGIGLV FWG VA E PLSHYLS PP P G G EP GTPE A AQQAM AY TF FHWG LHA WA I Y ALVAL A L AYF AYRKGL - PLLI 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 172 SS T L V PL V G EK h AK G LF G TIV D NFYLV A LI F AMG TSLGL ATPLVTECMQW LFGIP H TL QLDAI II TCWII L NA I CVAC GL 251
Cdd:pfam02028 160 SS A L Y PL L G DR - ID G PI G KAI D ILAII A TV F GVA TSLGL GALQINAGLSY LFGIP N TL TTQLA II AIITA L FT I SAVS GL 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 252 Q KG VRIA S DVRS YL SFLM L GW V F I VSGAS FI M N Y F TD S V G ML L MYLPR M L FYTDP IAK - GG FPQ GWT V FYWAWW VIY A IQ 330
Cdd:pfam02028 239 D KG IKRL S NLNM YL AVAL L LF V L I AGPTL FI L N T F VQ S L G DY L QNFVP M S FYTDP FGD t GG WLG GWT I FYWAWW IAW A PF 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 331 MSI F L ARISRGRT V RE LCF G MV L GL T AS T WILWT V L G SNTLL L IDKNIINIPNLI E Q y G VAR A IIETWAA LPL S T ATMWG 410
Cdd:pfam02028 319 VGM F I ARISRGRT I RE FIL G VL L VP T LF T FLWFS V F G GTAIY L ELNGPGDLADAV E A - G PPA A LFALLEQ LPL G T ILSVL 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 411 FFI L CF I AT VT LVNACSYTL AM STCRE vrd GEE PP LLV R IG W AI L V G IIGI VLL AL GGL NPI Q T A I I AGGC P LF F VNIMV 490
Cdd:pfam02028 398 ALL L II I FF VT SADSGTLVI AM LSSGG --- DLN PP RWQ R VF W GV L L G AVAA VLL LA GGL EAL Q S A S I IAAL P FS F ILLLM 474
490
....*....|
gi 477355183 491 TL S FI K DAKQ 500
Cdd:pfam02028 475 CI S LF K ALRE 484
Name
Accession
Description
Interval
E-value
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
1-504
0e+00
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 850.18
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 1 MKNEK R KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
Cdd:PRK03356 1 MKNEK K KTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 81 N E P PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF A YF 160
Cdd:PRK03356 81 D E K PEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAF G YF 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 161 FFVRKM E VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
Cdd:PRK03356 161 FFVRKM D VIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV S G A SFIMNYFTDSVGMLLMYLPRMLFYTDPI A KGGFPQGWTVFY 320
Cdd:PRK03356 241 ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV G G T SFIMNYFTDSVGMLLMYLPRMLFYTDPI G KGGFPQGWTVFY 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL I DKNIINIPNLIEQYGVARAIIETWAA 400
Cdd:PRK03356 321 WAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLL M DKNIINIPNLIEQYGVARAIIETWAA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 401 LPLSTATMWGFFILCFIATVTL V NACSYTLAMSTCREVRDGEEPPLLVRIGW A ILVGIIGIVLLALGGL N PIQTAIIAGG 480
Cdd:PRK03356 401 LPLSTATMWGFFILCFIATVTL I NACSYTLAMSTCREVRDGEEPPLLVRIGW S ILVGIIGIVLLALGGL K PIQTAIIAGG 480
490 500
....*....|....*....|....
gi 477355183 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
Cdd:PRK03356 481 CPLFFVNIMVTLSFIKDAKQNWKD 504
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
52-501
0e+00
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 543.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 52 GWA FEWYMVVM L FGWFWLV F GP Y A K K RLG -- N E P PEFST A SW IF M M FA SCTS A AVL FWG SI E IYY Y IS TPPFG LE P N ST G 129
Cdd:TIGR00842 1 GWA YILTVTLF L GFVLYIA F SR Y G K I RLG rd D E K PEFST L SW LA M L FA AGMG A GLM FWG VA E PLT Y YL TPPFG AG P T ST T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 130 A K E LG LAY S LFHWG PL PWA T Y SFLSV A F AYF F F v RK MEVI R P SS T LVPL V GEK h AK G LF G TIV D NFY LVA LI F AMG TSLG 209
Cdd:TIGR00842 81 A Q E QA LAY T LFHWG IH PWA I Y ALVGL A L AYF H F - RK GLPL R L SS A LVPL L GEK - VN G PI G KAI D ILA LVA TV F GVA TSLG 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 210 L AT P LVTECMQW LFGIP HTLQ L D A I II T C WII L NA I C VA C G LQ KG VR I A S DVRSY L S FL M L GW V F IV SGAS F IM N Y F T DS 289
Cdd:TIGR00842 159 L GA P QINAGLSA LFGIP DSFW L Q A L II L C VTA L AC I S VA S G VG KG IK I L S NINMA L A FL L L LF V L IV GPTV F LL N S F V DS 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 290 V G ML L MYL P R M L F Y TDP - IA KGG F P Q GWTVFYWAWW VIYAIQMSI F L ARISRGRT V RE LC FG MV LG L TA S TW ILWT V L G S 368
Cdd:TIGR00842 239 I G NY L QNF P Q M S F R TDP d DG KGG W P G GWTVFYWAWW ISWSPFVGM F I ARISRGRT I RE FI FG VL LG P TA F TW LWFS V F G N 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 369 NT LLL IDKN - I IN I P NLI E QY G v ARA IIETW AALPL S T A TM WGFF IL CF I ATV T LVNAC S YT LA MS T C R EVRD GEEPP LL 447
Cdd:TIGR00842 319 SA LLL QQNG g F IN G P FVV E TN G - ARA LFGLL AALPL G T I TM ALAL IL II I FFI T SADSA S LV LA NT T S R GGQL GEEPP KW 397
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 477355183 448 VR IG WA ILV G I I GI VLL AL GG - L NPI QT AI I AGGC P LF FV NIM V TL S F IKD A KQ N 501
Cdd:TIGR00842 398 VR VF WA VAI G L I AL VLL FS GG s L AAL QT TT I IAAL P FS FV MLV V MF S L IKD L KQ D 452
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
2-500
1.66e-154
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 449.98
E-value: 1.66e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 2 KN EK R K TG I E P K VF F P PLIIVGILCWLTVRDLD AA NV V I NA V FS YV T NVW GW AFEWYMVVMLFGWFW L V F GP Y A K K RLG - 80
Cdd:COG1292 5 NK EK F K KK I D P P VF I P SALLILAFVLWGLLFPE AA GA V L NA A FS WI T TNF GW FYLLLVLLFVVFCLY L A F SK Y G K I RLG g 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 81 - NEP PEFST A SW IF M M F ASCTSAAVL FWG SI E IY Y YIST PP F G L EP N S TG A KELGL AY SL FHWG PLP WA T Y SFLSV A F AY 159
Cdd:COG1292 85 d DAK PEFST F SW FA M L F SAGMGIGLV FWG VA E PL Y HFLS PP P G V EP G S PE A ARWAM AY TF FHWG LHA WA I Y ALVGL A L AY 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 160 F FFV R KMEV i RP SS T L V PL V G EK h AK G LF G TIV D NFYLV A LI F AMG TSLGL ATPLVTECMQW LFGIP HT L QLDA III TCW 239
Cdd:COG1292 165 F AYR R GLPL - TI SS A L Y PL L G DR - IY G PI G KVI D ILAVF A TV F GVA TSLGL GALQINAGLNY LFGIP NS L TVQI III AVI 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 240 II L NA I CVAC GL Q KG VRIA S DVRSY L SF L M L GW V F IV SGAS FI M N Y F TD S V G ML L MYLPR M LFY TD PIAKG G FPQ GWTVF 319
Cdd:COG1292 243 TA L FT I SAVS GL D KG IKRL S NLNMV L AL L L L LF V L IV GPTL FI L N L F VQ S L G DY L QNFVP M SLW TD AYGDT G WLG GWTVF 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 320 YWAWW VIY A IQMSI F L ARISRGRT V RE LCF G MV L GL T AS T WILWT V L G SNTLL L IDKNIINIPNLIEQ y GV AR A IIETWA 399
Cdd:COG1292 323 YWAWW IAW A PFVGL F I ARISRGRT I RE FVL G VL L VP T LF T FLWFS V F G GTAIH L ELNGGGDLAEAVAA - GV EA A LFALLE 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 400 A LPL S T ATMWGFF IL CF I AT VT LVNAC S YT LAM S T C rev RDG EEPP LLV RI G W AI L V G IIGI VLL AL GGL NPI QTA I I AG 479
Cdd:COG1292 402 Q LPL G T ILSVLAI IL VI I FF VT SADSG S LV LAM L T S --- GGD EEPP RWQ RI F W GV L I G LVAA VLL LA GGL SAL QTA S I IT 478
490 500
....*....|....*....|.
gi 477355183 480 GC P LF FV NIMVTL S FI K DAKQ 500
Cdd:COG1292 479 AL P FS FV LLLMCV S LV K ALRE 499
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
14-500
9.21e-127
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 378.03
E-value: 9.21e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 14 VF FPPLIIVGILCW L TVRDLD A ANV V I N AVFSYV T NVW GW AFEWYMVVM L FGWFW L V F GP Y AKK RLG -- NEP PEFST A SW 91
Cdd:pfam02028 1 VF AVSAGLILAFVL L GLIFPE A LSA V V N TALDWI T DNF GW FYLLLVLIF L VFALF L A F SR Y GNI RLG gd DDK PEFST F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 92 IF M M FA SCTSAAVL FWG SI E IYYYIST PP F G L EP NSTG A KELGL AY SL FHWG PLP WA T Y SFLSV A F AYF FFVRKM e VIRP 171
Cdd:pfam02028 81 FA M L FA AGMGIGLV FWG VA E PLSHYLS PP P G G EP GTPE A AQQAM AY TF FHWG LHA WA I Y ALVAL A L AYF AYRKGL - PLLI 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 172 SS T L V PL V G EK h AK G LF G TIV D NFYLV A LI F AMG TSLGL ATPLVTECMQW LFGIP H TL QLDAI II TCWII L NA I CVAC GL 251
Cdd:pfam02028 160 SS A L Y PL L G DR - ID G PI G KAI D ILAII A TV F GVA TSLGL GALQINAGLSY LFGIP N TL TTQLA II AIITA L FT I SAVS GL 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 252 Q KG VRIA S DVRS YL SFLM L GW V F I VSGAS FI M N Y F TD S V G ML L MYLPR M L FYTDP IAK - GG FPQ GWT V FYWAWW VIY A IQ 330
Cdd:pfam02028 239 D KG IKRL S NLNM YL AVAL L LF V L I AGPTL FI L N T F VQ S L G DY L QNFVP M S FYTDP FGD t GG WLG GWT I FYWAWW IAW A PF 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 331 MSI F L ARISRGRT V RE LCF G MV L GL T AS T WILWT V L G SNTLL L IDKNIINIPNLI E Q y G VAR A IIETWAA LPL S T ATMWG 410
Cdd:pfam02028 319 VGM F I ARISRGRT I RE FIL G VL L VP T LF T FLWFS V F G GTAIY L ELNGPGDLADAV E A - G PPA A LFALLEQ LPL G T ILSVL 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 411 FFI L CF I AT VT LVNACSYTL AM STCRE vrd GEE PP LLV R IG W AI L V G IIGI VLL AL GGL NPI Q T A I I AGGC P LF F VNIMV 490
Cdd:pfam02028 398 ALL L II I FF VT SADSGTLVI AM LSSGG --- DLN PP RWQ R VF W GV L L G AVAA VLL LA GGL EAL Q S A S I IAAL P FS F ILLLM 474
490
....*....|
gi 477355183 491 TL S FI K DAKQ 500
Cdd:pfam02028 475 CI S LF K ALRE 484
PRK09950
PRK09950 putative transporter; Provisional
18-504
5.95e-77
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 250.09
E-value: 5.95e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 18 PLI IVGI L C - WLT V RD L ---- DAANVVI N AV F SY VT NVW G WAFEWYMVVMLFGWFW L VFGP Y AKK RLG NEP PE F ST A SW I 92
Cdd:PRK09950 11 PLI STSL L A v FFI V AA L slfp QQSAAAA N TI F QW VT RTF G SPVQLFVLLAMILVLY L ATSK Y GNI RLG EGK PE Y ST L SW L 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 93 FM MFASCTSAAV L F WG SI E IY YY IS TP PFGLE P N S TG A K E LGLA YS L FHWG PLP WATY SFL S VAF AY F F F VRK MEVIRP S 172
Cdd:PRK09950 91 FM FICAGLGSST L Y WG VM E WA YY YQ TP GLNIA P R S PK A L E YSVS YS F FHWG ISA WATY ALA S LIM AY H F H VRK NKGLSL S 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 173 STLVPLV G E K h AK G LF G TI VD NFY L V A LIF A MGT SL GLATPLV T ECMQW L F G I P HTLQLD A II I TCWIILNAICVAC G LQ 252
Cdd:PRK09950 171 GIIAAIT G V K - PQ G PW G RL VD LMF L I A TVG A LTI SL VVTAATF T RGLSA L T G L P NNFTVQ A FV I LLSGVIFCLSSYI G ID 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 253 K G VRIA S DVRSYLS FL MLGW V F IV SGAS FI M N YFTD S V G MLLMYLPR M LFY TDP IAK G G F PQG WTVFYW A WW VI Y AIQMS 332
Cdd:PRK09950 250 N G LQRL S KMVGWGA FL FALL V L IV GPTE FI T N NIIN S I G LTTQNFLQ M SLF TDP MGD G S F TRN WTVFYW L WW IS Y TPGVA 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 333 I F LA R I SRGR TVR E LCF G MV LG LTAST W ILWT VL G S NTLLLIDKNI IN I P NLIEQY G VAR A IIETWAA LP LSTATMWGFF 412
Cdd:PRK09950 330 M F VT R V SRGR KIK E VIW G LI LG SSVGC W FFFG VL E S YAIHQFINGV IN V P QILNTL G GET A VQQLLSS LP AGKLFLAAYL 409
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 413 ILCF I ATVTLVN A CS YT L A MSTC R EV R D G EE P PLLV R IG W AILVGI I GIVL L AL G G - L NPIQ T AIIAGGC P LFFVNIMVT 491
Cdd:PRK09950 410 GIMI I FLASHMD A VA YT M A ATST R NL R E G DD P DRGL R LF W CVVITL I PLSI L FT G A s L DTMK T TVVLTAL P FLVILLIKV 489
490
....*....|...
gi 477355183 492 LS FI KDA KQ NWK D 504
Cdd:PRK09950 490 YG FI RWL KQ DYA D 502
PRK09928
PRK09928 choline transport protein BetT; Provisional
6-486
6.89e-50
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 181.43
E-value: 6.89e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 6 R K TG I E P K VF FPPLIIVGILCWL T VRDL D AA N VV IN AVFSY V TNVW GW ---- A FEW Y M V VML F gwfw LVFGPYAKKR LG N 81
Cdd:PRK09928 11 E K DR I N P V VF YTSAGLILLFSLT T ILFT D FS N RW IN RTLNW V SKTF GW yyll A ATL Y I V FVI F ---- IACSRFGSIK LG P 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 82 E -- P PEFS TA SW IF M M FA SCTSAAVL F WGSI E IYYYIST PP F G l EPNSTG A KELGLAYS LFH W G PLP W AT Y SFLSV A FA Y 159
Cdd:PRK09928 87 E qs K PEFS LL SW AA M L FA AGIGIDLM F FSVA E PVTQYMQ PP E G - AGQTIE A ARQAMVWT LFH Y G LTG W SM Y ALMGM A LG Y 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 160 F FFVRKMEV - IR ps S T L V P LV G EK h AK G LF G TI VD NFYLVAL IF AMG T S LG LATPLVTECMQW LF G IP HT L QLD A II I TC 238
Cdd:PRK09928 166 F SYRYNLPL t IR -- S A L Y P IF G KR - IN G PI G HS VD IAAVIGT IF GIA T T LG IGVVQLNYGLSV LF D IP ES L AAQ A AL I AL 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 239 WI I LNA I C V AC G LQ KG V R IA S DVRSY L SFLMLGW V FIVSGA SF IM N YFTDS VG MLLMYLPR M LFYT --- D P ia KGGFPQG 315
Cdd:PRK09928 243 SV I IAT I S V TS G VN KG I R VL S ELNVL L ALGLILF V LFMGDT SF LL N ALVLN VG DYVNRFMG M TLNS faf D R -- PTEWMNN 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 316 WT V F Y WAWWV IYAIQMSI FLARISRGRT V R ELCF G - MVLGL T AS tw I LW - TVL G SNT L LL I DKNIINIPNLIEQYG v A R A 393
Cdd:PRK09928 321 WT L F F WAWWV AWSPFVGL FLARISRGRT I R QFVL G t LIIPF T FT -- L LW l SIF G NSA L YE I IHGNAAFAEEAMAHP - E R G 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 477355183 394 IIETW A AL P LS T ATMWGFF I LCFIAT VT LVNACSYT L AMS T CREVRDGEEP P LLV R IG W AILV G IIGIVL L ALG G LNPI Q 473
Cdd:PRK09928 398 FYSLL A QY P AF T FSASVAT I TGLLFY VT SADSGALV L GNF T SKLKDINSDA P NWL R VF W SVAI G LLTLGM L MTN G ISAL Q 477
490
....*....|...
gi 477355183 474 TAIIAG G C P LF FV 486
Cdd:PRK09928 478 NTTVIM G L P FS FV 490
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
