|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
1-444 |
5.32e-164 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 470.08 E-value: 5.32e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 1 MPRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQIHPQK------ 74
Cdd:COG1167 11 GPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPApapraa 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 75 ---SSSDVVVFAGESEQPLPFQMGLPALDLFPRELWARVMGRRLRTQTRFNLALGDVCGEAALREAIVDYLRvSRGIESQ 151
Cdd:COG1167 91 aavAAPALRRLLEAAPGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIARYLA-RRGVPAS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 152 PEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDNGLDVTS--GIQNYPDARFALITP 229
Cdd:COG1167 170 PDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDAleAALRRHRPRAVYVTP 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 230 AHQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAGTFSKSLFPALRCAWLVVPV 309
Cdd:COG1167 250 SHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGSFSKTLAPGLRLGYLVAPG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 310 EQIAQFRQQASLEPCAVPVLWQNTLADFIRDGHFWRHLKKMRQHYAQRRQWIEQALTQQ---GFQVVPQKGGIQMVISM- 385
Cdd:COG1167 330 RLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHlpdGLRVTGPPGGLHLWLELp 409
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 386 -MGDDIAYARKANAAGLAVQALSTWRIRSTGKGGLLLSFTNIVSESMAQQVaQQLRDALS 444
Cdd:COG1167 410 eGVDAEALAAAALARGILVAPGSAFSADGPPRNGLRLGFGAPSEEELEEAL-RRLAELLR 468
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
90-429 |
1.87e-60 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 200.65 E-value: 1.87e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 90 LPFQMGLPALDLFPRELWARVMGRRLRTqtrfNLALGDVCGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLIL 169
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAG----LLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 170 RALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDNGLDVTSGIQNY----PDARFALITPAHqSPLGVALSLARRH 245
Cdd:cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEaaktPKTKLLYLNNPN-NPTGAVLSEEELE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 246 QVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAGTFSKSL-FPALRCAWLVVPVEQI-AQFRQQASLEP 323
Cdd:cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFgLPGLRIGYLIAPPEELlERLKKLLPYTT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 324 CAVPVLWQNTLADFIRDGHfwRHLKKMRQHYAQRRQWIEQALTQQGFQV-VPQKGGIQMVI--SMMGDDIAYARKANAAG 400
Cdd:cd00609 236 SGPSTLSQAAAAAALDDGE--EHLEELRERYRRRRDALLEALKELGPLVvVKPSGGFFLWLdlPEGDDEEFLERLLLEAG 313
|
330 340
....*....|....*....|....*....
gi 508377107 401 LAVQALSTWriRSTGKGGLLLSFTNIVSE 429
Cdd:cd00609 314 VVVRPGSAF--GEGGEGFVRLSFATPEEE 340
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
6-444 |
7.15e-38 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 142.49 E-value: 7.15e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 6 EIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQIHPqksssdvvvFAGE 85
Cdd:PRK15481 9 EIFDSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPSP---------VALE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 86 SEQP-LPFQ---MGLPALDLFPRelWARVMGRRLRTQTRFnlalgdvcGEAALREAIVDYLRVSRGIESQPE-QVFITHG 160
Cdd:PRK15481 80 GGDPgTPLHdlaGGNPDPQRLPD--LSRYFARLSRTPRLY--------GDAPVSPELHAWAARWLRDDCPVAfEIDLTSG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 161 YAASMSLILRALAEPGDGMWMEDPGFpLIRPIVTRH-GVNVFPVPVDDNGLDVTSGIQNYPD-ARFALITPAHQSPLGVA 238
Cdd:PRK15481 150 AIDAIERLLCAHLLPGDSVAVEDPCF-LSSINMLRYaGFSASPVSVDAEGMQPEKLERALAQgARAVILTPRAHNPTGCS 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 239 LSLARRH---QVLewAERSQAWVIEDDY---DSEFRYHgKPLPAlksldAPQRVIYAGTFSKSLFPALRCAWLVVPVEQI 312
Cdd:PRK15481 229 LSARRAAalrNLL--ARYPQVLVIIDDHfalLSSSPYH-SVIPQ-----TTQRWALIRSVSKALGPDLRLAFVASDSATS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 313 AQFRQQASLEPCAVPVLWQNTLADFIRDGHFWRHLKKMRQHYAQRRQWIEQALTQQGFQVVPQKGGIQMVISMMGDDIAY 392
Cdd:PRK15481 301 ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDTDSQAT 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 508377107 393 ARKANAAGLAVQALSTWRIRSTGKgGLLLSFTNIvSESMAQQVAQQLRDALS 444
Cdd:PRK15481 381 ALTLAKSGWLVREGEAFGVSAPSH-GLRITLSTL-NDAEINRLAADLHQALN 430
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
130-403 |
3.43e-28 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 114.84 E-value: 3.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVD-DN 208
Cdd:COG0436 68 GIPELREAIAAYYKRRYGVDLDPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYPSYRAAVRLAGGKPVPVPLDeEN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 209 G--LDVTSgIQNY--PDAR-FALITPAhqSPLGVALSLARRHQVLEWAERSQAWVIEDD-YdSEFRYHG-KPLPALKSLD 281
Cdd:COG0436 148 GflPDPEA-LEAAitPRTKaIVLNSPN--NPTGAVYSREELEALAELAREHDLLVISDEiY-EELVYDGaEHVSILSLPG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 282 APQRVIYAGTFSKSL-FPALRCAWLVVP---VEQIAQFRQQASLepcAVPVLWQNTLADFIRDGHFWrhLKKMRQHYAQR 357
Cdd:COG0436 224 LKDRTIVINSFSKSYaMTGWRIGYAVGPpelIAALLKLQSNLTS---CAPTPAQYAAAAALEGPQDY--VEEMRAEYRRR 298
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 508377107 358 RQWIEQALTQQGFQVVPQKGGIQMVIS---MMGDDIAYARKA-NAAGLAV 403
Cdd:COG0436 299 RDLLVEGLNEIGLSVVKPEGAFYLFADvpeLGLDSEEFAERLlEEAGVAV 348
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
95-439 |
1.60e-27 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 112.40 E-value: 1.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 95 GLPALDLFPRelWARVMGRRLRTQTRFNLalGDVCGEAALREAIVDYLRVSRGIESQPE-QVFITHGYAASMSLILRALA 173
Cdd:pfam00155 9 NEYLGDTLPA--VAKAEKDALAGGTRNLY--GPTDGHPELREALAKFLGRSPVLKLDREaAVVFGSGAGANIEALIFLLA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 174 EPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPV---DDNGLDVTSGIQNYPDARFALITPAHQSPLGVALSLARRHQVLEW 250
Cdd:pfam00155 85 NPGDAILVPAPTYASYIRIARLAGGEVVRYPLydsNDFHLDFDALEAALKEKPKVVLHTSPHNPTGTVATLEELEKLLDL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 251 AERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQ-RVIYAGTFSKSL-FPALRCAWLVVPVEQIAQFRQQASlePCAVPV 328
Cdd:pfam00155 165 AKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGpNLLVVGSFSKAFgLAGWRVGYILGNAAVISQLRKLAR--PFYSST 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 329 LWQNTLADFIRDGHF-WRHLKKMRQHYAQRRQWIEQALTQQGFQVVPQKGGIqmvISMMG----DDIAYARK-ANAAGLA 402
Cdd:pfam00155 243 HLQAAAAAALSDPLLvASELEEMRQRIKERRDYLRDGLQAAGLSVLPSQAGF---FLLTGldpeTAKELAQVlLEEVGVY 319
|
330 340 350
....*....|....*....|....*....|....*..
gi 508377107 403 VQALSTWRIRSTGKggllLSFTNiVSESMAQQVAQQL 439
Cdd:pfam00155 320 VTPGSSPGVPGWLR----ITVAG-GTEEELEELLEAI 351
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
2-67 |
3.42e-23 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 92.13 E-value: 3.42e-23
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 508377107 2 PRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVS 67
Cdd:cd07377 1 PLYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
1-69 |
1.99e-19 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 86.84 E-value: 1.99e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 508377107 1 MPRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQ 69
Cdd:COG2188 4 VPLYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEP 72
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
4-75 |
3.51e-19 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 82.53 E-value: 3.51e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 508377107 4 YQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQIHPQKS 75
Cdd:COG1725 12 YEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDARELLE 83
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
132-374 |
9.56e-16 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 77.86 E-value: 9.56e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 132 AALREAIVDYLRVSrgiesqPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDN-GL 210
Cdd:COG0079 51 TALREALAEYYGVP------PEQVLVGNGSDELIQLLARAFLGPGDEVLVPEPTFSEYPIAARAAGAEVVEVPLDEDfSL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 211 DVT---SGIQNYPDARFaLITPAhqSPLGVALSLArrhQVLEWAER--SQAWVIEDD--YDsefrYHGKPLPALKSLDAP 283
Cdd:COG0079 125 DLDallAAITERTDLVF-LCNPN--NPTGTLLPRE---ELEALLEAlpADGLVVVDEayAE----FVPEEDSALPLLARY 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 284 QRVIYAGTFSKSL-FPALRCAWLVVPVEQIAQFRQQasLEPCAVPVLWQNTLADFIRDGHfwrHLKKMRQHYAQRRQWIE 362
Cdd:COG0079 195 PNLVVLRTFSKAYgLAGLRLGYAIASPELIAALRRV--RGPWNVNSLAQAAALAALEDRA---YLEETRARLRAERERLA 269
|
250
....*....|..
gi 508377107 363 QALTQQGFQVVP 374
Cdd:COG0079 270 AALRALGLTVYP 281
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
130-377 |
1.24e-15 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 78.24 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVD-DN 208
Cdd:PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGeEN 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 209 GLDVTsgiqnyPDARFALITP-------AHQS-PLGVALSLARRHQVLEWAERSQAWVIEDD-YDsEFRYHGKPLPALKS 279
Cdd:PRK05764 149 GFKLT------VEQLEAAITPktkalilNSPSnPTGAVYSPEELEAIADVAVEHDIWVLSDEiYE-KLVYDGAEFTSIAS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 280 L--DAPQRVIYAGTFSKSlF--PALRCAWLVVPVEQIAQ---FRQQASLEPC------AVPVLwQNTLADfirdghfwrh 346
Cdd:PRK05764 222 LspELRDRTITVNGFSKA-YamTGWRLGYAAGPKELIKAmskLQSHSTSNPTsiaqyaAVAAL-NGPQDE---------- 289
|
250 260 270
....*....|....*....|....*....|..
gi 508377107 347 LKKMRQHYAQRRQWIEQALTQ-QGFQVVPQKG 377
Cdd:PRK05764 290 VEEMRQAFEERRDLMVDGLNEiPGLECPKPEG 321
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
4-66 |
1.44e-15 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 70.72 E-value: 1.44e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 508377107 4 YQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFV 66
Cdd:pfam00392 2 YEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
3-94 |
2.00e-15 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 75.36 E-value: 2.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 3 RYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQihPQKSSSDVVVF 82
Cdd:COG2186 8 LAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREP--SPWALLDPLAL 85
|
90
....*....|..
gi 508377107 83 AGESEQPLPFQM 94
Cdd:COG2186 86 LLALDDASLRDL 97
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
7-66 |
5.21e-15 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 69.14 E-value: 5.21e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 7 IARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFV 66
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
129-396 |
6.55e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 76.00 E-value: 6.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 129 CGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDN 208
Cdd:PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 209 G--LDVtsgiqnypDARFALITPAHQ--------SPLGVALS---LARRHQVLEWAER---SQAWVIEDDYDSEFRYHGK 272
Cdd:PRK06836 153 TfqPDL--------DALEAAITPKTKaviinspnNPTGVVYSeetLKALAALLEEKSKeygRPIYLISDEPYREIVYDGA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 273 PLPALksLDAPQRVIYAGTFSKSL-FPALRCAWLVVP--VEQIAQFRQQASLEP------CAvPVLWQNTLADFIrdghf 343
Cdd:PRK06836 225 EVPYI--FKYYDNSIVVYSFSKSLsLPGERIGYIAVNpeMEDADDLVAALVFANrilgfvNA-PALMQRVVAKCL----- 296
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 508377107 344 wrhlkkmRQH-----YAQRRQWIEQALTQQGFQVVPQKGGIQM-VISMMGDDIAYARKA 396
Cdd:PRK06836 297 -------DATvdvsiYKRNRDLLYDGLTELGFECVKPQGAFYLfPKSPEEDDVAFCEKA 348
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
130-377 |
2.91e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 73.99 E-value: 2.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPE-QVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDN 208
Cdd:PRK07309 68 GLLELRQAAADFVKEKYNLDYAPEnEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTEN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 209 GLDVT-----SGIQNYPDARFALITPAHQSPLGVALSlarRHQVLEWAE---RSQAWVIEDDYDSEFRYHGKPLPALKSL 280
Cdd:PRK07309 148 DFVLTpemleKAILEQGDKLKAVILNYPANPTGVTYS---REQIKALADvlkKYDIFVISDEVYSELTYTGEPHVSIAEY 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 281 dAPQRVIYAGTFSKS-LFPALRCAWLVVPVEQIAQFR--------------QQASLEpcavpvlwqnTLADFIRDGhfwr 345
Cdd:PRK07309 225 -LPDQTILINGLSKShAMTGWRIGLIFAPAEFTAQLIkshqylvtaattmaQFAAVE----------ALTNGKDDA---- 289
|
250 260 270
....*....|....*....|....*....|..
gi 508377107 346 hlKKMRQHYAQRRQWIEQALTQQGFQVVPQKG 377
Cdd:PRK07309 290 --LPMKKEYIKRRDYIIEKMTDLGFKIIKPDG 319
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
6-80 |
9.13e-12 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 64.79 E-value: 9.13e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 508377107 6 EIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQiHPQKSSSDVV 80
Cdd:PRK10421 6 EVADRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWR-HETWSEQNIV 79
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
130-372 |
2.93e-11 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 64.70 E-value: 2.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVP----- 204
Cdd:PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPsgpae 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 205 --------VDDNGLDVTSGIqnypdarfALITPAhqSPLGVALS---LARRHQVLEwaERsQAWVIEDDYDSEFRYHGKP 273
Cdd:PRK07337 148 rfqltaadVEAAWGERTRGV--------LLASPS--NPTGTSIApdeLRRIVEAVR--AR-GGFTIVDEIYQGLSYDAAP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 274 LPALkSLDapQRVIYAGTFSKSL-FPALRCAWLVVPVEQIAQFRQQA-SLEPCAVPVLWQNTLADFIRDGhfWRHLKKMR 351
Cdd:PRK07337 215 VSAL-SLG--DDVITINSFSKYFnMTGWRLGWLVVPEALVGTFEKLAqNLFICASALAQHAALACFEPDT--LAIYERRR 289
|
250 260
....*....|....*....|.
gi 508377107 352 QHYAQRRQWIEQALTQQGFQV 372
Cdd:PRK07337 290 AEFKRRRDFIVPALESLGFKV 310
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
130-367 |
9.60e-11 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 63.36 E-value: 9.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGF------------PLIRpIVTRHG 197
Cdd:PRK08361 71 GIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFvcyvedakiaeaKPIR-IPLREE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 198 VNVFPVPvdDNGLDVTSG-----IQNYPDarfalitpahqSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHG- 271
Cdd:PRK08361 150 NEFQPDP--DELLELITKrtrmiVINYPN-----------NPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGa 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 272 KPLPALKSldAPQRVIYAGTFSKSL-FPALRCAWLVVPVEQIAQFRQQASLEPCAVPVLWQNTLADFIRDGHFWRHLKKM 350
Cdd:PRK08361 217 KHYPMIKY--APDNTILANSFSKTFaMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEM 294
|
250
....*....|....*..
gi 508377107 351 RQHYAQRRQWIEQALTQ 367
Cdd:PRK08361 295 RKEYNERRKLVLKRLKE 311
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
130-402 |
1.64e-10 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 62.27 E-value: 1.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDNG 209
Cdd:PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 210 ----LDVtsgiqnypDARFALITPAHQ--------SPLGVALSLARRHQVLEWAERSQAWVIEDD-YDsefRYHGKPLPA 276
Cdd:PRK06108 142 ggwtLDL--------DRLLAAITPRTRalfinspnNPTGWTASRDDLRAILAHCRRHGLWIVADEvYE---RLYYAPGGR 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 277 LKS-LD--APQ-RVIYAGTFSKS-LFPALRCAWLVVPVEQ--------------IAQFRQQAslepcAVPVLWQNtlADF 337
Cdd:PRK06108 211 APSfLDiaEPDdRIIFVNSFSKNwAMTGWRLGWLVAPPALgqvleklieyntscVAQFVQRA-----AVAALDEG--EDF 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 508377107 338 IRDghFWRHLKKMRQHYAqrrqwieQAL-TQQGFQVVPQKGGIQMVISMMG--DDIAYA----RKANaAGLA 402
Cdd:PRK06108 284 VAE--LVARLRRSRDHLV-------DALrALPGVEVAKPDGAMYAFFRIPGvtDSLALAkrlvDEAG-LGLA 345
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
118-394 |
1.72e-10 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 62.38 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 118 QTRFNLALGdvcgEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHG 197
Cdd:PRK08960 62 HTRYTAARG----LPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVE 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 198 VNVFPVPVD-DNGLDVTSG-IQNY--PDARFALI-TPAhqSPLGVALS---LARRHQVLEwaERSQAWVIEDdydsefRY 269
Cdd:PRK08960 138 GAAQLVPVGpDSRYQLTPAlVERHwnADTVGALVaSPA--NPTGTLLSrdeLAALSQALR--ARGGHLVVDE------IY 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 270 HG--KPLPALKSLDAPQRVIYAGTFSKSL-FPALRCAWLVVP------VEQIAQ--------FRQQASLePCAVPvlwqN 332
Cdd:PRK08960 208 HGltYGVDAASVLEVDDDAFVLNSFSKYFgMTGWRLGWLVAPpaavpeLEKLAQnlyisastPAQHAAL-ACFEP----E 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 508377107 333 TLADfirdghfwrhLKKMRQHYAQRRQWIEQALTQQGFQVVPQKGG---IQMVISMMGDD-IAYAR 394
Cdd:PRK08960 283 TLAI----------LEARRAEFARRRDFLLPALRELGFGIAVEPQGafyLYADISAFGGDaFAFCR 338
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
134-369 |
2.29e-10 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 62.06 E-value: 2.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 134 LREAIVDYLRVSRGIESQPE-QVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGvnVFPVPVDDNGLDv 212
Cdd:PRK07682 62 LRQEIAKYLKKRFAVSYDPNdEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAG--GVPVPVATTLEN- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 213 tsGIQNYPDARFALITPAHQS--------PLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGK--PLPALKSLDa 282
Cdd:PRK07682 139 --EFKVQPAQIEAAITAKTKAillcspnnPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAytSFASIKGMR- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 283 pQRVIYAGTFSKSL-FPALRCAWLVVPVEqIAQFR---QQASLEpCAvPVLWQNTLADFIRDGHfwRHLKKMRQHYAQRR 358
Cdd:PRK07682 216 -ERTILISGFSKGFaMTGWRLGFIAAPVY-FSEAMlkiHQYSMM-CA-PTMAQFAALEALRAGN--DDVIRMRDSYRKRR 289
|
250
....*....|.
gi 508377107 359 QWIEQALTQQG 369
Cdd:PRK07682 290 NFFVTSFNEIG 300
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
135-337 |
7.61e-10 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 60.41 E-value: 7.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 135 REAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGV-----NVFPVPVDDNG 209
Cdd:PLN00143 80 RRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLeirhfDLLPEKGWEVD 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 210 LDVTSGIQNYPDARFALITPAhqSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIYA 289
Cdd:PLN00143 160 LDAVEAIADENTIAMVIINPG--NPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITL 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 508377107 290 GTFSKS-LFPALRCAWLVVP-----------VEQIAQFRQQASLEPC----AVPVLWQNTLADF 337
Cdd:PLN00143 238 GSISKRwMIPGWGLGWLVTCdpsgllqiceiADSIKKALNPAPFPPTfiqaAIPEILEKTTEDF 301
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
134-377 |
1.02e-09 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 60.12 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 134 LREAIVDYLRVSRGIESQPE-QVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNvfPVPVD--DNGL 210
Cdd:PRK07683 70 LRKAACNFVKDKYDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAK--PVFIDtrSTGF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 211 DVT-SGIQNY--PDARfALITPAHQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVI 287
Cdd:PRK07683 148 RLTaEALENAitEKTR-CVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 288 YAGTFSKS-LFPALRCAWLVVP---VEQIAQFRQQASlePCAVPVLwQNTLADFIRDGHfwRHLKKMRQHYAQRRQWIEQ 363
Cdd:PRK07683 227 VINGLSKShSMTGWRIGFLFAPsylAKHILKVHQYNV--TCASSIS-QYAALEALTAGK--DDAKMMRHQYKKRRDYVYN 301
|
250
....*....|....
gi 508377107 364 ALTQQGFQVVPQKG 377
Cdd:PRK07683 302 RLISMGLDVEKPTG 315
|
|
| C_P_lyase_phnF |
TIGR02325 |
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for ... |
3-69 |
2.78e-09 |
|
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond. [Transport and binding proteins, Anions, Regulatory functions, DNA interactions]
Pssm-ID: 131378 [Multi-domain] Cd Length: 238 Bit Score: 57.49 E-value: 2.78e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 508377107 3 RYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQ 69
Cdd:TIGR02325 9 LWRQIADKIEQEIAAGHLRAGDYLPAEMQLAERFGVNRHTVRRAIAALVERGLLRAEQGRGTFVAAR 75
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
130-337 |
3.78e-09 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 58.12 E-value: 3.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLrvSRGIESQ--PEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFP---VP 204
Cdd:TIGR01265 74 GALAAREAVAEYL--SSDLPGKltADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLydlLP 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 205 vdDNGLDVT-SGIQNYPDARFALITPAHQS-PLGVALSlaRRH--QVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSL 280
Cdd:TIGR01265 152 --EKDWEIDlDGLESLADEKTVAIVVINPSnPCGSVFS--RDHlqKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASF 227
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 508377107 281 DAPQRVIYAGTFSKSLF-PALRCAWLVVP----------VEQIAQFRQQaSLEPC-----AVPVLWQNTLADF 337
Cdd:TIGR01265 228 ASIVPVLSLGGISKRWVvPGWRLGWIIIHdphgifrdtvLQGLKNLLQR-ILGPAtivqgALPDILENTPQEF 299
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
2-69 |
1.39e-08 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 55.22 E-value: 1.39e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 508377107 2 PRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQ 69
Cdd:PRK09764 5 PLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEE 72
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
5-68 |
1.76e-08 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 54.54 E-value: 1.76e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 508377107 5 QEIARQLKTAIEQGELKPGARLpSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSE 68
Cdd:COG1802 14 EQVYEALREAILSGELPPGERL-SEAELAERLGVSRTPVREALRRLEAEGLVEIRPNRGARVAP 76
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
126-367 |
2.68e-08 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 55.58 E-value: 2.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 126 GDVCGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRH-GVNVFPVP 204
Cdd:PRK08363 67 GPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYgGVPVEYRT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 205 VDDNGL-----DVTSGIQNYPDArFALITPahQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPL-PALK 278
Cdd:PRK08363 147 IEEEGWqpdidDIRKKITEKTKA-IAVINP--NNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVsPGSL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 279 SLDAPqrVIYAGTFSKSLFPA---LRCAWLVVPVEQIAQFRQQ----ASLEPCAVPVLwQNTLADFIRDGHfwRHLKKMR 351
Cdd:PRK08363 224 TKDVP--VIVMNGLSKVYFATgwrLGYIYFVDPEGKLAEVREAidklARIRLCPNTPA-QFAAIAGLTGPM--DYLEEYM 298
|
250
....*....|....*.
gi 508377107 352 QHYAQRRQWIEQALTQ 367
Cdd:PRK08363 299 KKLKERRDYIYKRLNE 314
|
|
| PRK11402 |
PRK11402 |
transcriptional regulator PhoB; |
2-69 |
4.64e-08 |
|
transcriptional regulator PhoB;
Pssm-ID: 183118 [Multi-domain] Cd Length: 241 Bit Score: 53.69 E-value: 4.64e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 508377107 2 PRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQ 69
Cdd:PRK11402 9 LLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQ 76
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
135-307 |
6.44e-08 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 54.55 E-value: 6.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 135 REAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPL------IRPIVTRHgVNVFPVPVDDN 208
Cdd:PLN02656 79 RRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIyelcaaFRHLEVRY-VDLLPEKGWEV 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 209 GLDVTSGIQNYPDARFALITPAhqSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIY 288
Cdd:PLN02656 158 DLDAVEALADQNTVALVIINPG--NPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLT 235
|
170 180
....*....|....*....|
gi 508377107 289 AGTFSKS-LFPALRCAWLVV 307
Cdd:PLN02656 236 LGSLSKRwIVPGWRLGWFVT 255
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
130-294 |
1.20e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 53.60 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLrvsrgiESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPV--DD 207
Cdd:PRK06225 67 GFPELRELILKDL------GLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIysEE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 208 NGLDVTsgiqnyPDARFA----------LITPAhqSPLGVALSlarRHQVLEWAERSQAWVIEDDYDSEFR-YHGKPLPA 276
Cdd:PRK06225 141 CNYKLT------PELVKEnmdentrliyLIDPL--NPLGSSYT---EEEIKEFAEIARDNDAFLLHDCTYRdFAREHTLA 209
|
170
....*....|....*...
gi 508377107 277 LKSldAPQRVIYAGTFSK 294
Cdd:PRK06225 210 AEY--APEHTVTSYSFSK 225
|
|
| pdhR |
PRK09464 |
pyruvate dehydrogenase complex transcriptional repressor PdhR; |
7-78 |
1.32e-07 |
|
pyruvate dehydrogenase complex transcriptional repressor PdhR;
Pssm-ID: 181879 [Multi-domain] Cd Length: 254 Bit Score: 52.33 E-value: 1.32e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 508377107 7 IARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSEQIhpQKSSSD 78
Cdd:PRK09464 15 IEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSL--WQSFSD 84
|
|
| PRK14999 |
PRK14999 |
histidine utilization repressor; Provisional |
2-68 |
1.97e-07 |
|
histidine utilization repressor; Provisional
Pssm-ID: 184961 [Multi-domain] Cd Length: 241 Bit Score: 51.86 E-value: 1.97e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 508377107 2 PRYQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFVSE 68
Cdd:PRK14999 12 PFYETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQGVGTFVAE 78
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
120-379 |
4.94e-07 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 51.81 E-value: 4.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 120 RFNLALGDVCGEAALREAIVDYLRVSRGIESQ--PEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFP-LIRPIVTRH 196
Cdd:PLN02607 86 RENALFQDYHGLKSFRQAMASFMEQIRGGKARfdPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPgFDRDLRWRT 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 197 GVNVFPVPVDD-NGLDVT-----SGIQNYPDA----RFALIT-PAhqSPLGVALSLARRHQVLEWAERSQAWVIEDD--- 262
Cdd:PLN02607 166 GVKIVPIHCDSsNNFQVTpqaleAAYQEAEAAnirvRGVLITnPS--NPLGATVQRSVLEDILDFVVRKNIHLVSDEiys 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 263 ----YDSEFRYHGKPLPALKSLDAPQRVIYAGTFSKSL-FPALRCAWL-------VVPVEQIAQFRQQASLEpcavpvlw 330
Cdd:PLN02607 244 gsvfSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLgLPGFRVGTIysyndkvVTTARRMSSFTLVSSQT-------- 315
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 508377107 331 QNTLADFIRDGHFW-RHLKKMRQHYAQRRQWIEQALTQQGFQVVPQKGGI 379
Cdd:PLN02607 316 QHLLASMLSDEEFTeNYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGL 365
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
130-307 |
5.46e-07 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 51.71 E-value: 5.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGiESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFP---VPVD 206
Cdd:TIGR01264 74 GALSAREAIASYYHNPDG-PIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLynlLPDK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 207 DNGLDVTSGIQNYPDARFALITPAHQSPLGVALSlaRRH--QVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAP- 283
Cdd:TIGR01264 153 SWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFS--RQHleEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTv 230
|
170 180
....*....|....*....|....
gi 508377107 284 QRVIYAGTFSKSLFPALRCAWLVV 307
Cdd:TIGR01264 231 PILSCGGLAKRWLVPGWRLGWIII 254
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
4-94 |
2.51e-06 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 48.86 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 4 YQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWL-VRRGqAGTFVSEQIHPQKSSSDVVVF 82
Cdd:PRK10225 11 YQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVeVRRG-AGIYVLDSSGSHNTDSPDANV 89
|
90
....*....|..
gi 508377107 83 AGESEqplPFQM 94
Cdd:PRK10225 90 CNDAG---PFEL 98
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
4-83 |
2.61e-06 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 48.69 E-value: 2.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 4 YQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWL-VRRGQAGTFVSEQIHPQKSSSDVVVF 82
Cdd:PRK11523 10 YQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVeVRKGSGIHVVSNQPRHQQAADNNMEF 89
|
.
gi 508377107 83 A 83
Cdd:PRK11523 90 A 90
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
116-326 |
7.35e-06 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 47.81 E-value: 7.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 116 RTQTRFNLalgdVCGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTR 195
Cdd:PRK06107 61 RGETKYTL----VNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 196 HGVNvfPVPVD---DNGLDVTsgiqnyPDARFALITP--------AHQSPLGVALSLARRH---QVLEwaERSQAWVIED 261
Cdd:PRK06107 137 NDGT--PVIVAcpeEQGFKLT------PEALEAAITPrtrwlilnAPSNPTGAVYSRAELRalaDVLL--RHPHVLVLTD 206
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 508377107 262 DYDSEFRYHGKPLPALKSLdAPQ---RVIYAGTFSKSL-FPALRCAWLVVP---VEQIAQFRQQASLEPCAV 326
Cdd:PRK06107 207 DIYDHIRFDDEPTPHLLAA-APElrdRVLVTNGVSKTYaMTGWRIGYAAGPadlIAAINKLQSQSSSCPSSI 277
|
|
| PRK10079 |
PRK10079 |
phosphonate metabolism transcriptional regulator PhnF; Provisional |
3-66 |
3.51e-05 |
|
phosphonate metabolism transcriptional regulator PhnF; Provisional
Pssm-ID: 182227 [Multi-domain] Cd Length: 241 Bit Score: 45.15 E-value: 3.51e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 508377107 3 RYQEIARQLKTAIeQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAGTFV 66
Cdd:PRK10079 13 RYQEIAAKLEQEL-RQHYRCGDYLPAEQQLAARYEVNRHTLRRAIDQLVEKGWVQRRQGVGVLV 75
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
130-379 |
1.21e-04 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 44.03 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPE-QVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPV-DD 207
Cdd:PRK07681 70 GIQEFHEAVTEYYNNTHNVILNADkEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLkKE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 208 NGL--DVTSGIQNYPDARFALITPAHQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHG-KPLPALKSLDAPQ 284
Cdd:PRK07681 150 NDFlpDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGnKPISFLSVPGAKE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 285 RVIYAGTFSKSL-FPALRCAWLVVPVEQIAQFRQQASLEPCAVPVLWQNTLADFIRDGHFWrhLKKMRQHYAQRRQWIEQ 363
Cdd:PRK07681 230 VGVEINSLSKSYsLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAF--CEKNRGIYQERRDTLVD 307
|
250
....*....|....*.
gi 508377107 364 ALTQQGFQVVPQKGGI 379
Cdd:PRK07681 308 GFRTFGWNVDKPAGSM 323
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
135-352 |
1.43e-04 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 43.99 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 135 REAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNV--FPVpVDDNGLDV 212
Cdd:PLN00145 100 RRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVrhFDL-LPERGWEV 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 213 -TSGIQNYPDAR-FALITPAHQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAG 290
Cdd:PLN00145 179 dLEGVEALADENtVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLG 258
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 508377107 291 TFSKS-LFPALRCAWLVV-----------PVEQIAQFRqQASLEPC-----AVPVLWQNTLADFirdghFWRHLKKMRQ 352
Cdd:PLN00145 259 SISKRwVVPGWRLGWIATcdpngilketkVVDSIRNYL-NISTDPAtfvqgAIPQIIANTKEEF-----FTKTLGLLKE 331
|
|
| PLN02376 |
PLN02376 |
1-aminocyclopropane-1-carboxylate synthase |
127-262 |
1.95e-04 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 178004 [Multi-domain] Cd Length: 496 Bit Score: 43.53 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 127 DVCGEAALREAIVDYLRVSRG--IESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLI-RPIVTRHGVNVFPV 203
Cdd:PLN02376 92 DYHGLKKFRQAIAHFMGKARGgkVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFdRDLRWRTGVEIIPV 171
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 508377107 204 PV---DDNGLDVTSGIQNYPDARFA------LITPAHQSPLGVALSLARRHQVLEWAERSQAWVIEDD 262
Cdd:PLN02376 172 PCsssDNFKLTVDAADWAYKKAQESnkkvkgLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDE 239
|
|
| PRK03837 |
PRK03837 |
transcriptional regulator NanR; Provisional |
4-58 |
3.69e-04 |
|
transcriptional regulator NanR; Provisional
Pssm-ID: 235166 [Multi-domain] Cd Length: 241 Bit Score: 41.93 E-value: 3.69e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 508377107 4 YQEIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGwLVR 58
Cdd:PRK03837 15 SEEVEERLEQMIRSGEFGPGDQLPSERELMAFFGVGRPAVREALQALKRKG-LVQ 68
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
135-307 |
5.09e-04 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 42.41 E-value: 5.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 135 REAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFP---VPVDDNGLD 211
Cdd:PLN02187 114 RRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKfdlLPEKEWEID 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 212 VtSGIQNYPDAR-FALITPAHQSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAG 290
Cdd:PLN02187 194 L-EGIEAIADENtVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLA 272
|
170
....*....|....*...
gi 508377107 291 TFSKS-LFPALRCAWLVV 307
Cdd:PLN02187 273 GISKGwVVPGWKIGWIAL 290
|
|
| PTZ00377 |
PTZ00377 |
alanine aminotransferase; Provisional |
130-229 |
6.75e-04 |
|
alanine aminotransferase; Provisional
Pssm-ID: 240391 [Multi-domain] Cd Length: 481 Bit Score: 41.87 E-value: 6.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRAL-AEPGDGMWMEDPGFPLIRPIVTRHGvnVFPVP---V 205
Cdd:PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLiGDPSDGVMIPIPQYPLYSAAITLLG--GKQVPyylD 193
|
90 100
....*....|....*....|....*.
gi 508377107 206 DDNG--LDVTSGIQNYPDARFALITP 229
Cdd:PTZ00377 194 EEKGwsLDQEELEEAYEQAVRNGITP 219
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
90-307 |
8.38e-04 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 41.31 E-value: 8.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 90 LPFQMGLPALD--LFPRELWARVMGRRLRTQtRFNlALGDVCGEAALREAIVDYLRV------SRGIESQPEQVFITHGY 161
Cdd:PTZ00433 36 IKLSVGDPTLDgnLLTPAIQTKALVEAVDSQ-ECN-GYPPTVGSPEAREAVATYWRNsfvhkeSLKSTIKKDNVVLCSGV 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 162 AASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGV-----NVFPVPVDDNGLDVTSGIQNYPDARFALITPAhqSPLG 236
Cdd:PTZ00433 114 SHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIemrfyNCRPEKDWEADLDEIRRLVDDRTKALIMTNPS--NPCG 191
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 508377107 237 VALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKPLPALKSLDAP-QRVIYAGTFSKSLFPALRCAWLVV 307
Cdd:PTZ00433 192 SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTvPRVILGGTAKNLVVPGWRLGWLLL 263
|
|
| PLN02368 |
PLN02368 |
alanine transaminase |
91-251 |
1.17e-03 |
|
alanine transaminase
Pssm-ID: 177996 [Multi-domain] Cd Length: 407 Bit Score: 40.94 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 91 PFQMGLPAL-DLFPRELWARvmGRRLRTQTRFNL-ALGDVCGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLI 168
Cdd:PLN02368 69 PFLLDDPNVgLLFPADAIAR--AKHYLSLTSGGLgAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 169 LRALAE-PGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDN---GLDVTSGIQNYPDAR--------FALITPAhqSPLG 236
Cdd:PLN02368 147 LNAVIRgEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESenwGLDVNNLRQSVAQARskgitvraMVIINPG--NPTG 224
|
170
....*....|....*
gi 508377107 237 VALSLARRHQVLEWA 251
Cdd:PLN02368 225 QCLSEANLREILKFC 239
|
|
| PLN02231 |
PLN02231 |
alanine transaminase |
130-229 |
1.70e-03 |
|
alanine transaminase
Pssm-ID: 177876 [Multi-domain] Cd Length: 534 Bit Score: 40.69 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRAL-AEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPVDDN 208
Cdd:PLN02231 169 GIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLiRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEA 248
|
90 100
....*....|....*....|....
gi 508377107 209 ---GLDVTSGIQNYPDARFALITP 229
Cdd:PLN02231 249 tgwGLEISELKKQLEDARSKGITV 272
|
|
| PRK06290 |
PRK06290 |
LL-diaminopimelate aminotransferase; |
130-306 |
3.12e-03 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 235772 Cd Length: 410 Bit Score: 39.64 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 130 GEAALREAIVDYLRVSRGIESQPEQVFITH--GYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPV-D 206
Cdd:PRK06290 82 GIQEFKEAAARYMEKVFGVKDIDPVTEVIHsiGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLlE 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 207 DNGL--DVTS-----------GIQNYPDarfalitpahqSPLGVALSLARRHQVLEWAERSQAWVIEDDYDSEFRYHGKP 273
Cdd:PRK06290 162 ENNFlpDLDSipkdikekaklLYLNYPN-----------NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230
|
170 180 190
....*....|....*....|....*....|....
gi 508377107 274 LPALKSLDAPQRVIYAGTFSKSL-FPALRCAWLV 306
Cdd:PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYnMTGWRLAFVV 264
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
126-295 |
6.54e-03 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 38.79 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 126 GDVCGEAALREAIVDYLRVSRGIESQPEQVFITHGYAASMSLILRALAEPGDGMWMEDPGFPLIRPIVTRHGVNVFPVPV 205
Cdd:PRK07550 64 GPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPC 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 508377107 206 DDNgldvtSGIQNYPDARFALITPAHQS--------PLGVALSLARRHQVLEWAERSQAWVIED----DYDSEFryhGKP 273
Cdd:PRK07550 144 DEG-----PGLLPDPAAAEALITPRTRAialvtpnnPTGVVYPPELLHELYDLARRHGIALILDetyrDFDSGG---GAP 215
|
170 180
....*....|....*....|..
gi 508377107 274 LPALKSLDAPQRVIYAGTFSKS 295
Cdd:PRK07550 216 HDLFADPDWDDTLVHLYSFSKS 237
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