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Conserved domains on  [gi|535035217|gb|EQR82346|]
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hypothetical protein G795_04516 [Escherichia coli HVH 137 (4-2124971)]

Protein Classification

DUF3343 domain-containing protein( domain architecture ID 10570589)

DUF3343 domain-containing protein similar to Escherichia coli YtiA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Se_S_carrier pfam11823
Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. ...
 3-59 5.33e-15

Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length. It has been suggested that this family of proteins may be chaperones involved in Se or S trafficking in the cell.


:

Pssm-ID: 463362  Cd Length: 63  Bit Score: 62.91  E-value: 5.33e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 535035217   3 EYLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVI 59
Cdd:pfam11823  1 KYLITFESTTEAMKAEKLLKKAGIKARLIPTPREISAGCGLAIRFPEEDLEEILEIL 57
 
Name Accession Description Interval E-value
Se_S_carrier pfam11823
Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. ...
 3-59 5.33e-15

Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length. It has been suggested that this family of proteins may be chaperones involved in Se or S trafficking in the cell.


Pssm-ID: 463362  Cd Length: 63  Bit Score: 62.91  E-value: 5.33e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 535035217   3 EYLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVI 59
Cdd:pfam11823  1 KYLITFESTTEAMKAEKLLKKAGIKARLIPTPREISAGCGLAIRFPEEDLEEILEIL 57
 
Name Accession Description Interval E-value
Se_S_carrier pfam11823
Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. ...
 3-59 5.33e-15

Putative Se/S carrier protein-like; This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length. It has been suggested that this family of proteins may be chaperones involved in Se or S trafficking in the cell.


Pssm-ID: 463362  Cd Length: 63  Bit Score: 62.91  E-value: 5.33e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 535035217   3 EYLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVI 59
Cdd:pfam11823  1 KYLITFESTTEAMKAEKLLKKAGIKARLIPTPREISAGCGLAIRFPEEDLEEILEIL 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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