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Conserved domains on  [gi|549582282|gb|ERN86990|]
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fimbrial assembly chaperone [Salmonella enterica subsp. enterica serovar Kentucky str. 20793]

Protein Classification

PRK15295 family protein( domain architecture ID 11487726)

PRK15295 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15295 PRK15295
fimbrial assembly chaperone;
8-227 4.65e-140

fimbrial assembly chaperone;


:

Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 391.23  E-value: 4.65e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVTNKQAFIITPPLFRLDAGQKNSIR 87
Cdd:PRK15295   7 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQAFIITPPLFRLDAGQKNSIR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  88 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 167
Cdd:PRK15295  87 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 168 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 227
Cdd:PRK15295 167 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 226
 
Name Accession Description Interval E-value
PRK15295 PRK15295
fimbrial assembly chaperone;
8-227 4.65e-140

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 391.23  E-value: 4.65e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVTNKQAFIITPPLFRLDAGQKNSIR 87
Cdd:PRK15295   7 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQAFIITPPLFRLDAGQKNSIR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  88 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 167
Cdd:PRK15295  87 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 168 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 227
Cdd:PRK15295 167 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 226
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-224 6.63e-75

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 226.41  E-value: 6.63e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   1 MKHIKKSVLVVLL---TSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQV---TNKQAFIITPP 74
Cdd:COG3121    1 MKRLLRLLLLALLlllASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAgpdKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  75 LFRLDAGQKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNA-SANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKW 153
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEeGKNTLQIALRTRIKLFYRPAGL-KGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 549582282 154 QTAGDVITVNNPTPYYMNFASVTLNSHEVK---SATFVPPKSSASFKL--GSTAAPHGTVTWRLISDYGMSLEPHS 224
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKlkkGLGMVLPGSTRRWPLpaGASLAAGGKVTWATINDYGGAVPLEA 235
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-139 2.71e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 146.96  E-value: 2.71e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   22 IVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVT---NKQAFIITPPLFRLDAGQKNSIRVIRSGAPLPAD 98
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTdekAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 549582282   99 RESMYWLNIKGIPSIDD-NASANRVEISINTQIKLIYRPPAL 139
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKpKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15295 PRK15295
fimbrial assembly chaperone;
8-227 4.65e-140

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 391.23  E-value: 4.65e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVTNKQAFIITPPLFRLDAGQKNSIR 87
Cdd:PRK15295   7 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQAFIITPPLFRLDAGQKNSIR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  88 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 167
Cdd:PRK15295  87 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTP 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 168 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 227
Cdd:PRK15295 167 YYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEPHSGSF 226
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-224 6.63e-75

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 226.41  E-value: 6.63e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   1 MKHIKKSVLVVLL---TSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQV---TNKQAFIITPP 74
Cdd:COG3121    1 MKRLLRLLLLALLlllASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAgpdKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  75 LFRLDAGQKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNA-SANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKW 153
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEeGKNTLQIALRTRIKLFYRPAGL-KGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 549582282 154 QTAGDVITVNNPTPYYMNFASVTLNSHEVK---SATFVPPKSSASFKL--GSTAAPHGTVTWRLISDYGMSLEPHS 224
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKlkkGLGMVLPGSTRRWPLpaGASLAAGGKVTWATINDYGGAVPLEA 235
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 5-223 1.27e-60

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 189.99  E-value: 1.27e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   5 KKSVLVVLLTSHVAHAS-IVVGGTRLVFDGNNDESSINVENKDSKANLVQSWL-SVADPQVTNKQAFIITPPLFRLDAGQ 82
Cdd:PRK15299   6 KAGLLCCLLCGSLAHAAgINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAqSISETGASGDAPFMVTPPLFRLNGGQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  83 KNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKStPDSQSQQLKWQTAGDVITV 162
Cdd:PRK15299  86 KNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQK-PEEVADRLTWSRQGRTLTV 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549582282 163 NNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLgsTAAPHGTVTWRLISDYGMSLEPH 223
Cdd:PRK15299 165 KNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTL--PAAASGPIAWSIINDFGGTGPEH 223
PRK15208 PRK15208
molecular chaperone LpfB;
1-221 3.63e-48

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 158.15  E-value: 3.63e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   1 MKHIKKSVLVVLLTSHVAHASIV-VGGTRLVFDGNNDESSINVENKD-SKANLVQSWlsVADPQVTNKQAFIITPPLFRL 78
Cdd:PRK15208   1 MRLISFTALALALIAQNSFAGGVaLSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSW--IDDANGNKKTPFIITPPLFKL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  79 DAGQKNSIRVIRSGAPLPADRESMYWLNIKGIPS-IDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQLKWQTAG 157
Cdd:PRK15208  79 DPTKNNVLRIVNITNTLPQDRESVYWINVKAIPAkSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWN-KLRFTRAG 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 549582282 158 DVITVNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLE 221
Cdd:PRK15208 158 NQIKVENPSAFNLTFNQFYANGRDIEKAGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGE 221
PRK09926 PRK09926
fimbrial chaperone;
1-221 1.06e-47

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 157.19  E-value: 1.06e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   1 MKHIKKSVLVVL-----LTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSV----ADPQVTnKQAFII 71
Cdd:PRK09926   1 MFFNTKHTTALCfatcmAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTgddnAEPGSI-KVPFTA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  72 TPPLFRLDAGQKNSIRVIRSGA-PLPADRESMYWLNIKGIP---SIDDNASANRVEISINTQIKLIYRPPALtKSTPDSQ 147
Cdd:PRK09926  80 TPPVSRIDPKRGQTIKLMYTAStALPKDRESVFWFNVLEVPpkpDAEKVANQSLLQLAFRTRIKLFYRPDGL-KGNPSEA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 148 SQQLKWQTAGD----VITVNNPTPYYMNFASVTLNS----HEVKSaTFVPPKSSASFKLG--STAAPHGTVTWRLISDYG 217
Cdd:PRK09926 159 PLALKWSWAGSegkaSLRVTNPTPYYVSFSSGDLEAggkrYPVDS-KMIAPFSDESMKVKglSGKASSGKVHFYAINDFG 237


                 ....
gi 549582282 218 MSLE 221
Cdd:PRK09926 238 GAIE 241
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-139 2.71e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 146.96  E-value: 2.71e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   22 IVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVT---NKQAFIITPPLFRLDAGQKNSIRVIRSGAPLPAD 98
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTdekAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 549582282   99 RESMYWLNIKGIPSIDD-NASANRVEISINTQIKLIYRPPAL 139
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKpKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
10-222 3.72e-45

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 150.91  E-value: 3.72e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  10 VVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLSVADPQVTNKQAFIITPPLFRLDAGQKNSIRV 88
Cdd:PRK15290  27 VFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEKVLRI 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  89 IRS-GAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTkSTPDSQSQQLKWQTAGDVITVNNPTP 167
Cdd:PRK15290 107 IHTkGVSLPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPASIR-LIPEDAAPKVKWRREGRNLIAENPNP 185

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 549582282 168 YYMNFASVTLNSHEVkSATFVPPKSSASFKLGSTAAPHgTVTWRLISDYGMSLEP 222
Cdd:PRK15290 186 IHISVMDVIVDGHDV-PLNMIRPFETLTLPLPANSAGG-QMTWRFINDYGAVSDP 238
PRK15211 PRK15211
fimbrial chaperone;
8-217 4.69e-44

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 147.28  E-value: 4.69e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADpQVTNKQAFIITPPLFRLDAGQKNSIR 87
Cdd:PRK15211  10 SLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTT-QGSSTVYMVPAPPFFKVRPKEKQIIR 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  88 VIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQsQQLKWQTAGDVITVNNPTP 167
Cdd:PRK15211  89 IMKTDSALPKDRESLFWLNVQEIPPKPKASEGNVLAVALNTQVKLIYRPKALKEGRENAE-KNLQIIHRGGETYLKNPTP 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 549582282 168 YYMNFASVTLNSHEVK-------SATFVPPKSSASfkLGSTAApHGTVTWRLISDYG 217
Cdd:PRK15211 168 YYFAVTGVKLNGQPVKlsdrvmnEIAQLAPFSEVS--LGKLSL-NGTVTVQAVNDWG 221
PRK15224 PRK15224
pili assembly chaperone PapD;
13-222 4.01e-42

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 142.96  E-value: 4.01e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  13 LTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPqvTNKQAFIITPPLFRLDAGQKNSIRVIRSG 92
Cdd:PRK15224  21 LNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADK--SSPAPFLVMPPLFRLEANQQSQLRIVRTG 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  93 APLPADRESMYWLNIKGIPSIDDNASANR------VEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDVITVNNPT 166
Cdd:PRK15224  99 GDMPTDRETLQWVCIKAVPPENEPSDTQAkgatldLNLSINVCDKLIFRPDAV-KGTPEDVAGNLRWVETGNKLKVENPT 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 549582282 167 PYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAapHGTVTWRLISDYGMSLEP 222
Cdd:PRK15224 178 PFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSA--HGDIEWRVITDFGGESHP 231
PRK15195 PRK15195
molecular chaperone FimC;
8-217 1.77e-41

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 140.77  E-value: 1.77e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHAS--IVVGGTRLVFDGNNDESSINVENKDSKAN-LVQSWLSVADPQvtNKQAFIITPPLFRLDAGQKN 84
Cdd:PRK15195  11 IIFYLIISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERyLVNSWIENSSGV--KEKSFIVTPPLFVSEPKSEN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  85 SIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANR--VEISINTQIKLIYRPPALTKsTPDSQSQQLKWQTAGDVITV 162
Cdd:PRK15195  89 TLRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRnvLQLAILSRIKLFVRPINLQE-LPEEAPDTLKFSRSGNHLKV 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 549582282 163 NNPTPYYMNFASVTLNSHEVKSAtFVPPKSSASFKLGSTAapHGTVTWRLISDYG 217
Cdd:PRK15195 168 HNPSPYYVTLVNLQVGSQKLGNA-MIAPKVNSQIPLPSGV--QGKLKFQTVNDYG 219
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
12-217 2.08e-34

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 122.89  E-value: 2.08e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  12 LLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVTNKQA-----FIITPPLFRLDAGQKNSI 86
Cdd:PRK15192  14 LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEgnitpFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  87 RVIRSGAPLPADRESMYWLNIKGIPSidDNASANRVEISINTQIKLIYRPPALTkSTPDSQSQQLKWQTAGDVITVNNPT 166
Cdd:PRK15192  94 RVVYTGAPLPADRESLFTLSIAAIPS--GKPEANRVQMAFRSALKLLYRPEGLA-GNPQQAYRHLIWSLTPDGATVRNPT 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 549582282 167 PYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAApHGTVTWRLISDYG 217
Cdd:PRK15192 171 PYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHTV-RCTVRWQSINDYG 220
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 15-217 1.22e-29

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 110.63  E-value: 1.22e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  15 SHVAHASIVVGGTRLVFDGNNDESSINVENKDSKAN-LVQSWLSVADPQVTNkqAFIITPPLFRLDAGQKNSIRVIRSGA 93
Cdd:PRK15254  11 SQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPfLAQSWVTDADGVRTD--ALMALPPLQRIDAGQKSQVRITQVRG 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  94 ---PLPADRESMYWLNIKGIP--SIDDNAsanrVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTPY 168
Cdd:PRK15254  89 ltdKLPQDRETLFWFNVRGVPpkPEDDNV----LQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRNPTPY 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 549582282 169 YMNFASVTLN-SHEV---KSATFVPPKSSASFKlGSTAAPHGTVTWRLISDYG 217
Cdd:PRK15254 165 YITVAWLGADrSHRLsgfREGVMVPPLGSLPLK-AVLPAETRTLWVGYIDDYG 216
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 13-219 2.53e-28

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 106.77  E-value: 2.53e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  13 LTSHVAHASIVVGGTRLVFDGNNDESSINVENK-DSKANLVQSWLSVADPqvTNKQAFIITPPLFRLDAGQKNSIRVIRS 91
Cdd:PRK15188  20 LSFAAQAGGIALGATRVIYPQGSKQTSLPIINSsASNVFLIQSWVANADG--SRSTDFIITPPLFVIQPKKENILRIMYV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  92 GAPLPADRESMYWLNIKGIPSIDDNA-SANRVEISINTQIKLIYRPPALTKStPDSQSQQLKWQTAGDVITVNNPTPYYM 170
Cdd:PRK15188  98 GPSLPTDRESVFYLNSKAIPSVDKNKlTGNSLQIATQSVIKLFIRPKNLAEA-PAHAPSTLRCRNERGQLTITNPSPYYV 176

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 549582282 171 NFASVTLNSHEVKSaTFVPPKSSASFklgstAAPHGTVTWRLISDYGMS 219
Cdd:PRK15188 177 SMVELYSAGKKLPN-TMVPPKGAITL-----PATPGQVSLRTVNDFGAT 219
PRK15249 PRK15249
fimbrial chaperone;
9-217 2.72e-28

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 107.19  E-value: 2.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   9 LVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVAD----PQVTNKQAFIITPPLFRLDAGQKN 84
Cdd:PRK15249  17 LFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDmntsPENSSAMPFIATPPVFRIQPKAGQ 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  85 SIRVIRSGA-PLPADRESMYWLNIKGIP--SIDDNASANRVEISINTQIKLIYRPPALTKstPDSQSQQLKWQTAGDV-- 159
Cdd:PRK15249  97 VVRVIYNNTkKLPQDRESVFWFNVLQVPptNIGSDSGQNKMLVMLRSRIKLFYRPDGLGK--PDNLAKKLQIKTVNKGsg 174

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 549582282 160 ---ITVNNPTPYYMNFA--SVTLNSHEVKS-ATFVPPKSSASFKLG---STAAPHGTVTWRLISDYG 217
Cdd:PRK15249 175 ksgIVIVNPQPWFASLSnlNVKVNGASYNLdADMIAPFSSQTWWLPgkrSLKSFSGTVTVTLVNDQG 241
PRK11385 PRK11385
fimbrial chaperone;
7-217 5.21e-28

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 105.99  E-value: 5.21e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   7 SVLVVLLTSHVaHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLS-----VADPQVTNKQAFIITPPLFRLDAG 81
Cdd:PRK11385  14 AVLSLLVAGEL-QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwAGGEASTVPAPLLAAPPLILLKPG 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  82 QKNSIRVIRSGAP-LPADRESMYWLNIKGIPSidDNASANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDVI 160
Cdd:PRK11385  93 TTGTLRLLRTESDiLPVDRETLFELSIASVPS--GKVENQSVKVAMRSVFKLFWRPEGL-PGDPLEAYQQLRWTRNSQGV 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 549582282 161 TVNNPTPYYMNFASVTLNSHEVKSATFVPPKSSASFKLGSTAAPhGTVTWRLISDYG 217
Cdd:PRK11385 170 QLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAP-CHVAWRAINDYG 225
PRK15246 PRK15246
fimbrial assembly chaperone;
17-226 5.59e-25

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 98.11  E-value: 5.59e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  17 VAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVT---NKQAFIITPPLFRLDAGQKNSIRV-IRSG 92
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASpdnSKTPLVALPPVFKMQPGELRTLRLlLSSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  93 APLPADRESMYWLNIKGIPSI--DDNASANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDVITVNNPTPYYM 170
Cdd:PRK15246  87 QQLATDRESLFWLNIYQIPPVtqDIKNHPRKLVLPLRLRLKILIRPTGL-KAPTEAEEKKLRFIAKENTIRIVNPTSWYM 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 549582282 171 NFASVTLNSHEVKSaTFVPPKSSASFKLGSTAAPHGTVTWRLISD------YGMSLEPHSGS 226
Cdd:PRK15246 166 SLTLTMDNKKSIGD-IMVAPKTALDVPLTRSPTPGASINYAVINDsgnwrqYTAILEKYISE 226
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 6-217 9.24e-25

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 97.81  E-value: 9.24e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   6 KSVLVVLLTSHV--AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVADPQVTNKQ---AFIITPPLFRLDA 80
Cdd:PRK15253  17 KILSAVLLSAIIlpAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKiqvPFMLTPPVARVAA 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  81 GQKNSIRVIRSGAPLPADRESMYWLNIKGI-PSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSqSQQLKWQTAGDV 159
Cdd:PRK15253  97 ESGQQIKIKKMPNSLPDNKESLFYLNVLDIpPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDS-FQRIGLFRSNKT 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 549582282 160 ITVNNPTPYYMNFASVTLNSHEVKSAT-FVPPKSSASFKLGSTAAPHGTVTwrLISDYG 217
Cdd:PRK15253 176 VIMKNDTANWITVTDVKAGNTKINDQTiMLPPLSTQNINMKYASTSQYEVT--IIDDNG 232
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 10-217 1.93e-23

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 94.46  E-value: 1.93e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  10 VVLLTSHVAHASIVVGGTRLVFDGNndESSINVENKDSKANL---VQSWLSvADPQVTNKQAFIITPPLFRLDAGQKNSI 86
Cdd:PRK15274  16 VLLAAPLVSHSAIVPDRTRVIFNGN--ENSITVTLKNGNATLpylAQAWLE-DDKFAKDTRYFTALPPLQRIEPKSDGQV 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  87 RV--IRSGAPLPADRESMYWLNIKGIPSIDDNasANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTA--GDVITV 162
Cdd:PRK15274  93 KVqpLPAAASLPQDRESLFYFNVREIPPKSDK--PNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTyqGDGVIF 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 549582282 163 NNPTPYYMNFASVTLNSHEVKSA---TFVPPKSSASFKL-GSTAAPHGTVTWrlISDYG 217
Cdd:PRK15274 171 DNPTPFYLVISNAGSKENETASGfknLLIAPREKVTSPIkGASLGSSPVVGY--VDDYG 227
PRK15218 PRK15218
fimbrial assembly chaperone;
18-217 3.68e-23

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 93.12  E-value: 3.68e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  18 AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVAD---PQVTNKQAFIITPPLFRLDAGQKNSIRVIRSGAP 94
Cdd:PRK15218  16 AWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDtslPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANN 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  95 LPADRESMYWLNIKGI-PSIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQLKWQTAGDVITVNNPTPYYMNFA 173
Cdd:PRK15218  96 LPGDRESLFYLNVLDIpPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFS-RLQLLRAPGSISVKNNSANWITIP 174

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 549582282 174 SVTLNSHEVKSATFVPPKSSASFKLgSTAAPHGTVTwrLISDYG 217
Cdd:PRK15218 175 EIKAKSKVNKETLLLAPWSSQSITT-TVVVNSYTVT--LIDDSG 215
PRK15285 PRK15285
fimbrial chaperone StfD;
7-220 1.35e-22

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 92.15  E-value: 1.35e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   7 SVLVVLLTSH-VAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLSvADPQVTNKQAFIITPPLFRLDAGQKN 84
Cdd:PRK15285  11 AVLLLLLGGYgSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVE-DEKGVKITSPLIVVPPVQRIEPSAIG 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  85 SIRV--IRSGAPLPADRESMYWLNIKGIPSIDDNAsaNRVEISINTQIKLIYRPPALTKSTPDSQSQ-QLKWQTAGDVIT 161
Cdd:PRK15285  90 QVKIqgMPALASLPQDRETLFYYNVREIPPQSDKP--NTLQIALQTRIKVFYRPQALSKIDMQHPWQyKITLQRQGNGYQ 167

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 549582282 162 VNNPTPYYMNFASVTLNSHEVKSATFVP----PKSSASFKLGSTAAPHGTVTwRLISDYGMSL 220
Cdd:PRK15285 168 VSNPTGYYVVLSNASNRMDGTPARGFSPlviaPKSNVTLGGDASELGHSPVL-TYVNDYGARL 229
PRK15233 PRK15233
fimbrial chaperone SefB;
24-175 1.35e-21

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 89.40  E-value: 1.35e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  24 VGGTRLVFDGNNDESSINVENKDSKANLVQSwlSVADPQVTNKQAFIITPPLFRLDAGQKNSIRVIRSGAPLPADRESMY 103
Cdd:PRK15233  44 LGTTRVIYKEDAPSTSFWIMNEKEYPILVQT--QVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 104 WLNIKGIPSIDDNASANR--------VEISINTQIKLIYRPPALTKSTPDSqSQQLKWQTAGDVITVNNPTPYYMNFASV 175
Cdd:PRK15233 122 WLCVKGVPPLNDNESNNKnnittnlnVNVVTNSCIKLIYRPKTIDLTTMEI-ADKLKLERKGNSIVIKNPTSSYVNIANI 200
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 8-221 1.61e-17

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 78.16  E-value: 1.61e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282   8 VLVVLLTSHVAHASIVVGGTRLV-FDGNNDESSINVENKDSKANLVQSwlSVADPQVTNKQAFIITPPLFRLDAGQKNSI 86
Cdd:PRK09918  11 ALVLLSSSSAVHAAGMVPETSVViVEESDGEGSINVKNTDSNPILLYT--TLVDLPEDKSKLLLVTPPVARVEPGQSQQV 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282  87 R-VIRSGAPLpaDRESMYWLNIKGIPSIDDNasANRVEISINTQIKLIYRPPALTKSTpdSQSQQLKWQTAGDVITVNNP 165
Cdd:PRK09918  89 RfILKSGSPL--NTEHLLRVSFEGVPPKPGG--KNKVVMPIRQDLPVLIQPAALPVVR--DPWKLLVWSISGNNLVVSNP 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 549582282 166 TPYYMNFAS--VTLNSHEVKS--ATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLE 221
Cdd:PRK09918 163 SPYVVRLGQqvILLPSGKVVAlpKPYILPGESLTVAITNSKATDTKVRFFPASRYGFVVP 222
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 162-217 1.89e-16

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 70.75  E-value: 1.89e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 549582282  162 VNNPTPYYMNFASVTLNSHEVKSATF---VPPKSSASFKLGSTAAPHGTVTWRLISDYG 217
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDpgmVAPFSSQTFAGLPAPAAGGTVSYTYINDYG 59
PRK15308 PRK15308
fimbrial protein TcfA;
67-119 2.72e-03

fimbrial protein TcfA;


Pssm-ID: 237939 [Multi-domain]  Cd Length: 234  Bit Score: 37.96  E-value: 2.72e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 549582282  67 QAFIITPPLFRLDAGQKNSIRVIRSGAPLpadRESMYWLNIKGIPSIDDNASA 119
Cdd:PRK15308  75 TGLVVSPEKFALPAGTTRTVRVISLQAPE---REEAWRVYFEPVAELEDDPQA 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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