NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|552104401|gb|ERT70177|]
View 

ribokinase [Brucella abortus 03-2770-11]

Protein Classification

ribokinase( domain architecture ID 10797757)

ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
D_ribokin_bact TIGR02152
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ...
14-307 2.20e-128

ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]


:

Pssm-ID: 274000 [Multi-domain]  Cd Length: 293  Bit Score: 367.70  E-value: 2.20e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   14 GSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVI 93
Cdd:TIGR02152   1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   94 DDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPV 173
Cdd:TIGR02152  81 KDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLLQLEIPLETVLEAAKIAKKHGVKVILNPAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  174 GDASQmADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVV 253
Cdd:TIGR02152 161 IKDLD-DELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAV 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 552104401  254 DTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVE 307
Cdd:TIGR02152 240 DTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293
 
Name Accession Description Interval E-value
D_ribokin_bact TIGR02152
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ...
14-307 2.20e-128

ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]


Pssm-ID: 274000 [Multi-domain]  Cd Length: 293  Bit Score: 367.70  E-value: 2.20e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   14 GSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVI 93
Cdd:TIGR02152   1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   94 DDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPV 173
Cdd:TIGR02152  81 KDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLLQLEIPLETVLEAAKIAKKHGVKVILNPAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  174 GDASQmADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVV 253
Cdd:TIGR02152 161 IKDLD-DELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAV 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 552104401  254 DTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVE 307
Cdd:TIGR02152 240 DTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
9-302 7.81e-110

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 320.65  E-value: 7.81e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:cd01174    1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLL 168
Cdd:cd01174   81 YVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDAALELIAAADVLLLQLEIPLETVLAALRAARRAGVTVIL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPVgdASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPF 248
Cdd:cd01174  161 NPAPA--RPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAF 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 552104401 249 KVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPT 302
Cdd:cd01174  239 KVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIPT 292
PRK11142 PRK11142
ribokinase; Provisional
9-310 5.39e-83

ribokinase; Provisional


Pssm-ID: 236858 [Multi-domain]  Cd Length: 306  Bit Score: 252.87  E-value: 5.39e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:PRK11142   4 KLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLL 168
Cdd:PRK11142  84 PVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHRELIANADALLMQLETPLETVLAAAKIAKQHGTKVIL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPvgdASQMAD-LIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTP 247
Cdd:PRK11142 164 NPAP---ARELPDeLLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPG 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 552104401 248 FKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVEELI 310
Cdd:PRK11142 241 FRVQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRKGAQPSIPWREEIDAFL 303
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
9-306 5.29e-80

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 244.79  E-value: 5.29e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:COG0524    1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAygADIAKARITLLQ-----REVPHEANLAVAKAVRAAG 163
Cdd:COG0524   81 GVRRDPGAPTGLAFILVDPDGERTIVFYRGANAELTPEDLDE--ALLAGADILHLGgitlaSEPPREALLAALEAARAAG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 164 GTVLLDPAPVGD-----ASQMADLIALSDIISPNETEAAEITGIEptdlaSAEAAGRKLLERGPKIVILKLGSRGALLIT 238
Cdd:COG0524  159 VPVSLDPNYRPAlwepaRELLRELLALVDILFPNEEEAELLTGET-----DPEEAAAALLARGVKLVVVTLGAEGALLYT 233
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 552104401 239 ADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREV 306
Cdd:COG0524  234 GGEVVHVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPALPTREEV 301
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
9-298 1.64e-60

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 194.87  E-value: 1.64e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401    9 KIFVFGSVNVDVSARmaALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:pfam00294   1 KVVVIGEANIDLIGN--VEGLPGELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARI----TLLQREVPHEANLAVAKAVRAAGG 164
Cdd:pfam00294  79 YVVIDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEENEDLLENADLlyisGSLPLGLPEATLEELIEAAKNGGT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  165 T--VLLDPAPvGDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEV 242
Cdd:pfam00294 159 FdpNLLDPLG-AAREALLELLPLADLLKPNEEELEALTGAKLDDIEEALAALHKLLAKGIKTVIVTLGADGALVVEGDGE 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 552104401  243 KHFTPF-KVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGA 298
Cdd:pfam00294 238 VHVPAVpKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQT 294
 
Name Accession Description Interval E-value
D_ribokin_bact TIGR02152
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ...
14-307 2.20e-128

ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]


Pssm-ID: 274000 [Multi-domain]  Cd Length: 293  Bit Score: 367.70  E-value: 2.20e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   14 GSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVI 93
Cdd:TIGR02152   1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   94 DDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPV 173
Cdd:TIGR02152  81 KDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLLQLEIPLETVLEAAKIAKKHGVKVILNPAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  174 GDASQmADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVV 253
Cdd:TIGR02152 161 IKDLD-DELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAV 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 552104401  254 DTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVE 307
Cdd:TIGR02152 240 DTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
9-302 7.81e-110

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 320.65  E-value: 7.81e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:cd01174    1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLL 168
Cdd:cd01174   81 YVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDAALELIAAADVLLLQLEIPLETVLAALRAARRAGVTVIL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPVgdASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPF 248
Cdd:cd01174  161 NPAPA--RPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAF 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 552104401 249 KVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPT 302
Cdd:cd01174  239 KVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIPT 292
PRK11142 PRK11142
ribokinase; Provisional
9-310 5.39e-83

ribokinase; Provisional


Pssm-ID: 236858 [Multi-domain]  Cd Length: 306  Bit Score: 252.87  E-value: 5.39e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:PRK11142   4 KLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLL 168
Cdd:PRK11142  84 PVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHRELIANADALLMQLETPLETVLAAAKIAKQHGTKVIL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPvgdASQMAD-LIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTP 247
Cdd:PRK11142 164 NPAP---ARELPDeLLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPG 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 552104401 248 FKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVEELI 310
Cdd:PRK11142 241 FRVQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRKGAQPSIPWREEIDAFL 303
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
9-306 5.29e-80

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 244.79  E-value: 5.29e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:COG0524    1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAygADIAKARITLLQ-----REVPHEANLAVAKAVRAAG 163
Cdd:COG0524   81 GVRRDPGAPTGLAFILVDPDGERTIVFYRGANAELTPEDLDE--ALLAGADILHLGgitlaSEPPREALLAALEAARAAG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 164 GTVLLDPAPVGD-----ASQMADLIALSDIISPNETEAAEITGIEptdlaSAEAAGRKLLERGPKIVILKLGSRGALLIT 238
Cdd:COG0524  159 VPVSLDPNYRPAlwepaRELLRELLALVDILFPNEEEAELLTGET-----DPEEAAAALLARGVKLVVVTLGAEGALLYT 233
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 552104401 239 ADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREV 306
Cdd:COG0524  234 GGEVVHVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPALPTREEV 301
PTZ00292 PTZ00292
ribokinase; Provisional
4-306 2.95e-63

ribokinase; Provisional


Pssm-ID: 185541 [Multi-domain]  Cd Length: 326  Bit Score: 203.04  E-value: 2.95e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   4 GEAPLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREF 83
Cdd:PTZ00292  12 GEAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRN 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  84 GLDTGSVRVIDDVDTGMAIIQVE-ETGQNTIAVCAGANARWSSADIDAYGADIAK-ARITLLQREVPHEANLAVAKAVRA 161
Cdd:PTZ00292  92 GVNTSFVSRTENSSTGLAMIFVDtKTGNNEIVIIPGANNALTPQMVDAQTDNIQNiCKYLICQNEIPLETTLDALKEAKE 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 162 AGGTVLLDPAPV---GDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLIT 238
Cdd:PTZ00292 172 RGCYTVFNPAPApklAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIITLGANGCLIVE 251
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 552104401 239 AD-EVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREV 306
Cdd:PTZ00292 252 KEnEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSSYPHPSEL 320
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
9-298 1.64e-60

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 194.87  E-value: 1.64e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401    9 KIFVFGSVNVDVSARmaALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:pfam00294   1 KVVVIGEANIDLIGN--VEGLPGELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   89 SVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAKARI----TLLQREVPHEANLAVAKAVRAAGG 164
Cdd:pfam00294  79 YVVIDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEENEDLLENADLlyisGSLPLGLPEATLEELIEAAKNGGT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  165 T--VLLDPAPvGDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEV 242
Cdd:pfam00294 159 FdpNLLDPLG-AAREALLELLPLADLLKPNEEELEALTGAKLDDIEEALAALHKLLAKGIKTVIVTLGADGALVVEGDGE 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 552104401  243 KHFTPF-KVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGA 298
Cdd:pfam00294 238 VHVPAVpKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQT 294
ribokinase_group_A cd01942
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ...
10-296 3.34e-46

Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238917 [Multi-domain]  Cd Length: 279  Bit Score: 157.47  E-value: 3.34e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  10 IFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGS 89
Cdd:cd01942    2 VAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTSH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  90 VRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYgadIAKARITLLQREVPHEANlavAKAVRAAGGTVLLD 169
Cdd:cd01942   82 VRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPNDEADP---DGLADIVHLSSGPGLIEL---ARELAAGGITVSFD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 170 PAPV---GDASQMADLIALSDIISPNETEAAeitgieptdlASAEAAGRKLLER--GPKIVILKLGSRGALLITADEVKH 244
Cdd:cd01942  156 PGQElprLSGEELEEILERADILFVNDYEAE----------LLKERTGLSEAELasGVRVVVVTLGPKGAIVFEDGEEVE 225
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 552104401 245 FTPFK-VKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGA 296
Cdd:cd01942  226 VPAVPaVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAASLKVERRGA 278
KdgK cd01166
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form ...
9-296 2.29e-45

2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.


Pssm-ID: 238571 [Multi-domain]  Cd Length: 294  Bit Score: 155.81  E-value: 2.29e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSArmaalPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:cd01166    1 DVVTIGEVMVDLSP-----PGGGRLEQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTS 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIA--VCAGANARWSSADIDAygADIAKAR------ITLLQREVPHEANLAVAKAVR 160
Cdd:cd01166   76 HVRVDPGRPTGLYFLEIGAGGERRVLyyRAGSAASRLTPEDLDE--AALAGADhlhlsgITLALSESAREALLEALEAAK 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 161 AAGGTVLLDP------APVGDASQ-MADLIALSDIISPNETEAAEITGIEptDLASAEAAGRKLlERGPKIVILKLGSRG 233
Cdd:cd01166  154 ARGVTVSFDLnyrpklWSAEEAREaLEELLPYVDIVLPSEEEAEALLGDE--DPTDAAERALAL-ALGVKAVVVKLGAEG 230
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 552104401 234 ALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGA 296
Cdd:cd01166  231 ALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGD 293
bac_FRK cd01167
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ...
48-296 9.13e-38

Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.


Pssm-ID: 238572 [Multi-domain]  Cd Length: 295  Bit Score: 135.84  E-value: 9.13e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEETGQNTIA----VCAGANARW 123
Cdd:cd01167   32 ANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEfyrgPAADLLLDT 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 124 SSADIDAYGADIAKA-RITLLqREVPHEANLAVAKAVRAAGGTVLLDP--------APVGDASQMADLIALSDIISPNET 194
Cdd:cd01167  112 ELNPDLLSEADILHFgSIALA-SEPSRSALLELLEAAKKAGVLISFDPnlrpplwrDEEEARERIAELLELADIVKLSDE 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 195 EAAEITGIEPtdlasAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQA- 273
Cdd:cd01167  191 ELELLFGEED-----PEEIAALLLLFGLKLVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRg 265
                        250       260
                 ....*....|....*....|....*....
gi 552104401 274 ------RPLHDCVRYSSAAGAIAVTRVGA 296
Cdd:cd01167  266 llaldeDELAEALRFANAVGALTCTKAGA 294
adenosine_kinase cd01168
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside ...
48-296 1.64e-35

Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.


Pssm-ID: 238573 [Multi-domain]  Cd Length: 312  Bit Score: 130.43  E-value: 1.64e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTgSVRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSAD 127
Cdd:cd01168   59 ANTIRGAAALGGSAAFIGRVGDDKLGDFLLKDLRAAGVDT-RYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDD 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 128 IDAygADIAKARITLL---QREVPHEANLAVAKAVRAAGGTVLLD-PAPVGD---ASQMADLIALSDIISPNETEAAEIT 200
Cdd:cd01168  138 LDW--SLLAKAKYLYLegyLLTVPPEAILLAAEHAKENGVKIALNlSAPFIVqrfKEALLELLPYVDILFGNEEEAEALA 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 201 GIEPTDlaSAEAAgRKLLERGPKIVILKLGSRGALLITADEVKHFTPFK-VKVVDTVAAGDSFNGGFAVAFSQARPLHDC 279
Cdd:cd01168  216 EAETTD--DLEAA-LKLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPvEKIVDTNGAGDAFAGGFLYGLVQGEPLEEC 292
                        250
                 ....*....|....*..
gi 552104401 280 VRYSSAAGAIAVTRVGA 296
Cdd:cd01168  293 IRLGSYAAAEVIQQLGP 309
FruK COG1105
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
49-312 2.83e-33

1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];


Pssm-ID: 440722 [Multi-domain]  Cd Length: 304  Bit Score: 124.09  E-value: 2.83e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGHDAfGELALKQMREFGLDTGSVRVIDDVDTGMAIIqVEETGQNTIAVCAGAnaRWSSADI 128
Cdd:COG1105   40 NVARVLKALGVDVTALGFLGGFT-GEFIEELLDEEGIPTDFVPIEGETRINIKIV-DPSDGTETEINEPGP--EISEEEL 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 129 DA----YGADIAKARITL----LQREVPHEANLAVAKAVRAAGGTVLLDPApvGDAsqMADLI-ALSDIISPNETEAAEI 199
Cdd:COG1105  116 EAllerLEELLKEGDWVVlsgsLPPGVPPDFYAELIRLARARGAKVVLDTS--GEA--LKAALeAGPDLIKPNLEELEEL 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 200 TGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDC 279
Cdd:COG1105  192 LGRPLETLEDIIAAARELLERGAENVVVSLGADGALLVTEDGVYRAKPPKVEVVSTVGAGDSMVAGFLAGLARGLDLEEA 271
                        250       260       270
                 ....*....|....*....|....*....|...
gi 552104401 280 VRYSSAAGAIAVTRVGAGaaAPTAREVEELIGR 312
Cdd:COG1105  272 LRLAVAAGAAAALSPGTG--LPDREDVEELLAQ 302
ribokinase_group_B cd01945
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ...
13-302 4.56e-31

Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .


Pssm-ID: 238920 [Multi-domain]  Cd Length: 284  Bit Score: 117.78  E-value: 4.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  13 FGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRV 92
Cdd:cd01945    5 VGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTSFIVV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  93 IDDVDTGMAIIQVEETGQNTIAVcagaNARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDpAP 172
Cdd:cd01945   85 APGARSPISSITDITGDRATISI----TAIDTQAAPDSLPDAILGGADAVLVDGRQPEAALHLAQEARARGIPIPLD-LD 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 173 VGDASQMADLIALSDIISPNETEAAEITGieptdlASAEAAGRKLLERGPKIVILKLGSRGALLITAD-EVKHFTPFKVK 251
Cdd:cd01945  160 GGGLRVLEELLPLADHAICSENFLRPNTG------SADDEALELLASLGIPFVAVTLGEAGCLWLERDgELFHVPAFPVE 233
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 552104401 252 VVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPT 302
Cdd:cd01945  234 VVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAAALKCRGLGGRAGLPT 284
FruK_PfkB_like cd01164
1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. ...
49-297 2.56e-29

1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.


Pssm-ID: 238570 [Multi-domain]  Cd Length: 289  Bit Score: 113.40  E-value: 2.56e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGhDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIiqVEETGQNTIAVCAGAnaRWSSADI 128
Cdd:cd01164   41 NVARVLKDLGVEVTALGFLG-GFTGDFFEALLKEEGIPDDFVEVAGETRINVKI--KEEDGTETEINEPGP--EISEEEL 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 129 DAYGADIAKAR-----ITL---LQREVPHEANLAVAKAVRAAGGTVLLDpapVGDASQMADLIALSDIISPNETEAAEIT 200
Cdd:cd01164  116 EALLEKLKALLkkgdiVVLsgsLPPGVPADFYAELVRLAREKGARVILD---TSGEALLAALAAKPFLIKPNREELEELF 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 201 GIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCV 280
Cdd:cd01164  193 GRPLGDEEDVIAAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLSLEEAL 272
                        250
                 ....*....|....*..
gi 552104401 281 RYSSAAGAIAVTRVGAG 297
Cdd:cd01164  273 RLAVAAGSATAFSPGTG 289
1-PFK TIGR03168
hexose kinase, 1-phosphofructokinase family; This family consists largely of ...
49-309 3.02e-28

hexose kinase, 1-phosphofructokinase family; This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.


Pssm-ID: 274464 [Multi-domain]  Cd Length: 303  Bit Score: 110.74  E-value: 3.02e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   49 NQAVAVAKLGGAIRFVGAVGHDAfGELALKQMREFGLDTGSVRVIDDVDTGMAIiqVEETGQNTIAVCAGANArwSSADI 128
Cdd:TIGR03168  40 NVARVLARLGAEVVATGFLGGFT-GEFIEALLAEEGIKNDFVEVKGETRINVKI--KESSGEETELNEPGPEI--SEEEL 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  129 DA----YGADIAKARITL----LQREVPHEANLAVAKAVRAAGGTVLLDpapVGDASQMADLIALSDIISPNETEAAEIT 200
Cdd:TIGR03168 115 EQllekLRELLASGDIVVisgsLPPGVPPDFYAQLIAIARKKGAKVILD---TSGEALREALAAKPFLIKPNHEELEELF 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  201 GIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCV 280
Cdd:TIGR03168 192 GRELKTLEEIIEAARELLDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLSLEEAL 271
                         250       260
                  ....*....|....*....|....*....
gi 552104401  281 RYSSAAGAIAVTRVGAGaaAPTAREVEEL 309
Cdd:TIGR03168 272 RFAVAAGSAAAFSPGTG--LPDPEDVEEL 298
YegV_kinase_like cd01944
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase ...
9-295 2.89e-27

YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238919 [Multi-domain]  Cd Length: 289  Bit Score: 107.89  E-value: 2.89e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGaNQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTG 88
Cdd:cd01944    1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGGGF-NVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGIEIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDvDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGADIAK----ARITLLQREVPHEANLAVAKAVrAAGG 164
Cdd:cd01944   80 LPPRGGD-DGGCLVALVEPDGERSFISISGAEQDWSTEWFATLTVAPYDyvylSGYTLASENASKVILLEWLEAL-PAGT 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 165 TVLLDPAP-VGDASQ--MADLIALSDIISPNETEAAEITGiepTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADE 241
Cdd:cd01944  158 TLVFDPGPrISDIPDtiLQALMAKRPIWSCNREEAAIFAE---RGDPAAEASALRIYAKTAAPVVVRLGSNGAWIRLPDG 234
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 552104401 242 VKHFTP-FKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVG 295
Cdd:cd01944  235 NTHIIPgFKVKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
PRK09434 PRK09434
aminoimidazole riboside kinase; Provisional
48-307 1.62e-25

aminoimidazole riboside kinase; Provisional


Pssm-ID: 236514 [Multi-domain]  Cd Length: 304  Bit Score: 103.48  E-value: 1.62e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEETGQN--TIAVCAGANARWSS 125
Cdd:PRK09434  32 ANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERsfTFMVRPSADLFLQP 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 126 ADIDAYGAD-------IAkaritlLQREVPHEANLAVAKAVRAAGGTVLLDP---APV-GDASQMADLI----ALSDIIS 190
Cdd:PRK09434 112 QDLPPFRQGewlhlcsIA------LSAEPSRSTTFEAMRRIKAAGGFVSFDPnlrEDLwQDEAELRECLrqalALADVVK 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 191 PNETEAAEITGIepTDLASAEAAGRKLLerGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAF 270
Cdd:PRK09434 186 LSEEELCFLSGT--SQLEDAIYALADRY--PIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGL 261
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 552104401 271 SQARPLHDC------VRYSSAAGAIAVTRVGAGAAAPTAREVE 307
Cdd:PRK09434 262 SQAGLWTDEaelaeiIAQAQACGALATTAKGAMTALPNRQELE 304
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
9-291 5.16e-24

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 98.93  E-value: 5.16e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTvNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTg 88
Cdd:cd01941    1 EIVVIGAANIDLRGKVSGSLVPGTS-NPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESEKAGLNV- 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRVIDDVDTGMAIIQVEETGQNTIAVC-AGANARWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVL 167
Cdd:cd01941   79 RGIVFEGRSTASYTAILDKDGDLVVALAdMDIYELLTPDFLRKIREALKEAKPIVVDANLPEEALEYLLALAAKHGVPVA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 168 LDPAPVGDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALL---ITADEVKH 244
Cdd:cd01941  159 FEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAKGVLLssrEGGVETKL 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 552104401 245 FTPFKV-KVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAV 291
Cdd:cd01941  239 FPAPQPeTVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALTL 286
PLN02341 PLN02341
pfkB-type carbohydrate kinase family protein
49-313 4.33e-23

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215195 [Multi-domain]  Cd Length: 470  Bit Score: 98.75  E-value: 4.33e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTgsVRVIDDVDTGMAIIQVEET--------GQNTIAVCAGAN 120
Cdd:PLN02341 124 NFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEEGISV--VGLIEGTDAGDSSSASYETllcwvlvdPLQRHGFCSRAD 201
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 121 A------RWSSADIDAYGADIAKARITLLQREVPHEANL-AVAKAVRAA---GGTVLLDPAPVG-------DASQMA--D 181
Cdd:PLN02341 202 FgpepafSWISKLSAEAKMAIRQSKALFCNGYVFDELSPsAIASAVDYAidvGTAVFFDPGPRGksllvgtPDERRAleH 281
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 182 LIALSDIISPNETEAAEITGIEPtdlasAEAAGRKLLERG--PKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAG 259
Cdd:PLN02341 282 LLRMSDVLLLTSEEAEALTGIRN-----PILAGQELLRPGirTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCG 356
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 552104401 260 DSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAREVEELIGRA 313
Cdd:PLN02341 357 DSFAAAIALGYIHNLPLVNTLTLANAVGAATAMGCGAGRNVATLEKVLELLRAS 410
Guanosine_kinase_like cd01947
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like ...
9-297 5.29e-20

Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238922 [Multi-domain]  Cd Length: 265  Bit Score: 87.47  E-value: 5.29e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401   9 KIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGlDTG 88
Cdd:cd01947    1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGG-DKH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  89 SVRvIDDVDTGMAIIQVEETGQNTIAVCAGAnarwssaDIDAYGADIAKARITLLqreVPHEANLAVAKAVRAAGGTVLL 168
Cdd:cd01947   80 TVA-WRDKPTRKTLSFIDPNGERTITVPGER-------LEDDLKWPILDEGDGVF---ITAAAVDKEAIRKCRETKLVIL 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPVGDASQMADLIALSDIISPNETEAAEITgieptdlasaeaAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPF 248
Cdd:cd01947  149 QVTPRVRVDELNQALIPLDILIGSRLDPGELV------------VAEKIAGPFPRYLIVTEGELGAILYPGGRYNHVPAK 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 552104401 249 KVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAG 297
Cdd:cd01947  217 KAKVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGAICVSHFGPY 265
PLN02323 PLN02323
probable fructokinase
48-313 2.68e-19

probable fructokinase


Pssm-ID: 215183 [Multi-domain]  Cd Length: 330  Bit Score: 86.60  E-value: 2.68e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEETGQNTIAVcaganARWSSAD 127
Cdd:PLN02323  47 ANVAVGISRLGGSSAFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMF-----YRNPSAD 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 128 I----DAYGAD-IAKARI-----TLLQREVPHEANLAVAKAVRAAGGTVLLDPA------PVGDAS--QMADLIALSDII 189
Cdd:PLN02323 122 MllreSELDLDlIRKAKIfhygsISLITEPCRSAHLAAMKIAKEAGALLSYDPNlrlplwPSAEAAreGIMSIWDEADII 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 190 SPNETEAAEITGIEPTDLASAeaagRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVA 269
Cdd:PLN02323 202 KVSDEEVEFLTGGDDPDDDTV----VKLWHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQ 277
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 552104401 270 FSQARP-------LHDCVRYSSAAGAIAVTRVGAGAAAPTAREVEELIGRA 313
Cdd:PLN02323 278 LAKDLSlledeerLREALRFANACGAITTTERGAIPALPTKEAVLKLLKKA 328
RfaE_like cd01172
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ...
48-308 6.31e-18

RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.


Pssm-ID: 238577 [Multi-domain]  Cd Length: 304  Bit Score: 82.22  E-value: 6.31e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSV-----------RVIDD------VDTGMAIIQVEETGQ 110
Cdd:cd01172   43 ANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEGIDTDGIvdegrptttktRVIARnqqllrVDREDDSPLSAEEEQ 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 111 NTIAVCAGANArwssaDIDAY-GADIAKARITLLQREvpheanlAVAKAVRAAGGTVLLDPAPVgDASQMADlialSDII 189
Cdd:cd01172  123 RLIERIAERLP-----EADVViLSDYGKGVLTPRVIE-------ALIAAARELGIPVLVDPKGR-DYSKYRG----ATLL 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 190 SPNETEAAEITGIEPTDLASAEAAGRKLLER-GPKIVILKLGSRGALLITAD-EVKHFTPFKVKVVDTVAAGDSFNGGFA 267
Cdd:cd01172  186 TPNEKEAREALGDEINDDDELEAAGEKLLELlNLEALLVTLGEEGMTLFERDgEVQHIPALAKEVYDVTGAGDTVIATLA 265
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 552104401 268 VAFSQARPLHDCVRYSSAAGAIAVTRVgaGAAAPTAREVEE 308
Cdd:cd01172  266 LALAAGADLEEAAFLANAAAGVVVGKV--GTAPVTPKELLL 304
ribokinase_pfkB_like cd00287
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ...
120-270 8.11e-18

ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).


Pssm-ID: 238177 [Multi-domain]  Cd Length: 196  Bit Score: 79.83  E-value: 8.11e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 120 NARWSSADIDAYGADIAKARITLLQREVPheanLAVAKAVRAAGGTVLLDPAPVG---DASQMADLIALSDIISPNETEA 196
Cdd:cd00287   45 ALARLGVSVTLVGADAVVISGLSPAPEAV----LDALEEARRRGVPVVLDPGPRAvrlDGEELEKLLPGVDILTPNEEEA 120
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 552104401 197 AEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITAD-EVKHFTPFKVKVVDTVAAGDSFNGGFAVAF 270
Cdd:cd00287  121 EALTGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGgTEVHVPAFPVKVVDTTGAGDAFLAALAAGL 195
PRK09813 PRK09813
fructoselysine 6-kinase; Provisional
49-296 9.06e-13

fructoselysine 6-kinase; Provisional


Pssm-ID: 182090 [Multi-domain]  Cd Length: 260  Bit Score: 67.07  E-value: 9.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVdtgMAIIQVEETGQNTI------AVCAGAnaR 122
Cdd:PRK09813  28 NVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGV---TAQTQVELHDNDRVfgdyteGVMADF--A 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 123 WSSADID-AYGADIAKARITllqrevpHEANLAVAKaVRAAGGTVLLDPAPVGDASQMADLIALSDIIspneteaaeiTG 201
Cdd:PRK09813 103 LSEEDYAwLAQYDIVHAAIW-------GHAEDAFPQ-LHAAGKLTAFDFSDKWDSPLWQTLVPHLDYA----------FA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 202 IEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVR 281
Cdd:PRK09813 165 SAPQEDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMTLPQAMA 244
                        250
                 ....*....|....*
gi 552104401 282 YSSAAGAIAVTRVGA 296
Cdd:PRK09813 245 QGTACAAKTIQYHGA 259
Fructoselysine_kinase_like cd01940
Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a ...
49-294 1.47e-11

Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.


Pssm-ID: 238915 [Multi-domain]  Cd Length: 264  Bit Score: 63.53  E-value: 1.47e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDvDTGMAIIQVEETGQNTIAVCAGANARWSSADI 128
Cdd:cd01940   27 NVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEG-ENAVADVELVDGDRIFGLSNKGGVAREHPFEA 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 129 DAY---GADIAKARITLLQREVPheanlavaKAVRAAGGtvlldpapvgdasqmaDLIALSDIISPNETEAAEITGIEPT 205
Cdd:cd01940  106 DLEylsQFDLVHTGIYSHEGHLE--------KALQALVG----------------AGALISFDFSDRWDDDYLQLVCPYV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 206 DLASAEAAG----------RKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARp 275
Cdd:cd01940  162 DFAFFSASDlsdeevkaklKEAVSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGG- 240
                        250
                 ....*....|....*....
gi 552104401 276 lhDCVRYSSAAGAIAVTRV 294
Cdd:cd01940  241 --TAIAEAMRQGAQFAAKT 257
PdxK COG2240
Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal ...
179-293 2.17e-11

Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]; Pyridoxal/pyridoxine/pyridoxamine kinase is part of the Pathway/BioSystem: Pyridoxal phosphate biosynthesis


Pssm-ID: 441841 [Multi-domain]  Cd Length: 272  Bit Score: 63.24  E-value: 2.17e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 179 MADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILK--------LGSRGALLITADEVKHFT---- 246
Cdd:COG2240  132 MRRLVPLADIITPNLTELALLTGRPYETLEEALAAARALLALGPKIVVVTsvplddtpADKIGNLAVTADGAWLVEtpll 211
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 552104401 247 PFKVkvvdtVAAGDSFNGGFAVAFSQARPLHDCVRYSSAA--GAIAVTR 293
Cdd:COG2240  212 PFSP-----NGTGDLFAALLLAHLLRGKSLEEALERAAAFvyEVLERTA 255
ribokinase_group_C cd01946
Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase ...
181-266 9.48e-11

Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238921 [Multi-domain]  Cd Length: 277  Bit Score: 61.33  E-value: 9.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 181 DLIALSDIISPNETEAAEITGieptdLASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVK-VVDTVAAG 259
Cdd:cd01946  159 KVLAKVDVVIINDGEARQLTG-----AANLVKAARLILAMGPKALIIKRGEYGALLFTDDGYFAAPAYPLEsVFDPTGAG 233

                 ....*..
gi 552104401 260 DSFNGGF 266
Cdd:cd01946  234 DTFAGGF 240
PRK10294 PRK10294
6-phosphofructokinase 2; Provisional
154-295 3.36e-10

6-phosphofructokinase 2; Provisional


Pssm-ID: 182361 [Multi-domain]  Cd Length: 309  Bit Score: 59.80  E-value: 3.36e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 154 AVAKAVRAAGGTVLLDPApvGDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERG-PKIVILKLGSR 232
Cdd:PRK10294 151 QLISAAQKQGIRCIIDSS--GDALSAALAIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELVNSGkAKRVVVSLGPQ 228
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 552104401 233 GALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVG 295
Cdd:PRK10294 229 GALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQG 291
pyridoxal_pyridoxamine_kinase cd01173
Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5 ...
165-281 5.06e-10

Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.


Pssm-ID: 238578 [Multi-domain]  Cd Length: 254  Bit Score: 58.75  E-value: 5.06e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 165 TVLLDPApVGDASQM------------ADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILK---- 228
Cdd:cd01173  105 LYVCDPV-MGDNGKLyvvaeeivpvyrDLLVPLADIITPNQFELELLTGKKINDLEDAKAAARALHAKGPKTVVVTsvel 183
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 552104401 229 --LGSRGALLITADEVKHF-TPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVR 281
Cdd:cd01173  184 adDDRIEMLGSTATEAWLVqRPKIPFPAYFNGTGDLFAALLLARLLKGKSLAEALE 239
PRK09850 PRK09850
pseudouridine kinase; Provisional
10-292 1.67e-09

pseudouridine kinase; Provisional


Pssm-ID: 182111 [Multi-domain]  Cd Length: 313  Bit Score: 58.08  E-value: 1.67e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  10 IFVFGSVNVDVSARMAAlPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGS 89
Cdd:PRK09850   7 VVIIGSANIDVAGYSHE-SLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDK 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  90 VRVIDDVDTGMAIIQVEETGQNTIAVCAGANARWSSADIDAYGAD-IAKARITLLQREVPHEANLAVAKavRAAGGTVLL 168
Cdd:PRK09850  86 CLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHREfIQRAKVIVADCNISEEALAWILD--NAANVPVFV 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 169 DPAPVGDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITAD-EVKHFTP 247
Cdd:PRK09850 164 DPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISgESGWSAP 243
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 552104401 248 FKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVT 292
Cdd:PRK09850 244 IKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS 288
PLN02548 PLN02548
adenosine kinase
59-295 2.18e-09

adenosine kinase


Pssm-ID: 178163 [Multi-domain]  Cd Length: 332  Bit Score: 57.80  E-value: 2.18e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  59 GAIRFVGAVGHDAFGElalkQMREFGLDTGsVRVIDDVDtgmaiiqvEETGQNTIAVCAGANARWSSADIDA---YGAD- 134
Cdd:PLN02548  70 GATSYMGCIGKDKFGE----EMKKCATAAG-VNVHYYED--------ESTPTGTCAVLVVGGERSLVANLSAancYKVEh 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 135 ---------IAKAR---ITLLQREVPHEANLAVAKAVRAAGGTVLLD-PAP-----VGDasQMADLIALSDIISPNETEA 196
Cdd:PLN02548 137 lkkpenwalVEKAKfyyIAGFFLTVSPESIMLVAEHAAANNKTFMMNlSAPficefFKD--QLMEALPYVDFLFGNETEA 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 197 ---AEITGIEPTDL---ASAEAAGRKLLERGPKIVILKLGSRGALLITADEVKHF--TPF-KVKVVDTVAAGDSFNGGFA 267
Cdd:PLN02548 215 rtfAKVQGWETEDVeeiALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFpvIPLpKEKLVDTNGAGDAFVGGFL 294
                        250       260
                 ....*....|....*....|....*...
gi 552104401 268 VAFSQARPLHDCVRYSSAAGAIAVTRVG 295
Cdd:PLN02548 295 SQLVQGKDIEECVRAGNYAANVIIQRSG 322
fruK PRK09513
1-phosphofructokinase; Provisional
160-297 3.00e-09

1-phosphofructokinase; Provisional


Pssm-ID: 181923 [Multi-domain]  Cd Length: 312  Bit Score: 57.01  E-value: 3.00e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 160 RAAGGTVLLDPApvgDASQMADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITA 239
Cdd:PRK09513 158 RSQCPCIIFDSS---REALVAGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALREQGIAHVVISLGAEGALWVNA 234
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 552104401 240 DEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAG 297
Cdd:PRK09513 235 SGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVSALAVSQSNVG 292
Phos_pyr_kin pfam08543
Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate ...
154-281 3.41e-09

Phosphomethylpyrimidine kinase; This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes.


Pssm-ID: 430062 [Multi-domain]  Cd Length: 246  Bit Score: 56.34  E-value: 3.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  154 AVAKAVRAAGGTVLLDP-------APVGDASQMA----DLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGP 222
Cdd:pfam08543  77 AVAEKLDKYGVPVVLDPvmvaksgDSLLDDEAIEalkeELLPLATLITPNLPEAEALTGRKIKTLEDMKEAAKKLLALGA 156
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 552104401  223 KIVILK---LGSRGA----LLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVR 281
Cdd:pfam08543 157 KAVLIKgghLEGEEAvvtdVLYDGGGFYTLEAPRIPTKNTHGTGCTLSAAIAANLAKGLSLPEAVR 222
PLN02379 PLN02379
pfkB-type carbohydrate kinase family protein
55-305 2.37e-08

pfkB-type carbohydrate kinase family protein


Pssm-ID: 178005 [Multi-domain]  Cd Length: 367  Bit Score: 54.80  E-value: 2.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  55 AKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVdTGMAIIQVEETGQNTIAVCAGANARWSSADI---DAY 131
Cdd:PLN02379  98 AGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGP-TAQCVCLVDALGNRTMRPCLSSAVKLQADELtkeDFK 176
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 132 GADIAKARITLLQREVPHEAnLAVAKAVraaGGTVLLDPAP---VGDA-SQMADLIALSDI--ISPNETEAAEITGIEPT 205
Cdd:PLN02379 177 GSKWLVLRYGFYNLEVIEAA-IRLAKQE---GLSVSLDLASfemVRNFrSPLLQLLESGKIdlCFANEDEARELLRGEQE 252
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 206 dlASAEAAgRKLLERGPKIVILKLGSRGALLITADEVKHFTPFK-VKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSS 284
Cdd:PLN02379 253 --SDPEAA-LEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGeTNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGA 329
                        250       260
                 ....*....|....*....|.
gi 552104401 285 AAGAiAVTRVGAGAAAPTARE 305
Cdd:PLN02379 330 CSGG-SVVRALGGEVTPENWQ 349
PTZ00247 PTZ00247
adenosine kinase; Provisional
59-296 2.49e-08

adenosine kinase; Provisional


Pssm-ID: 240328 [Multi-domain]  Cd Length: 345  Bit Score: 54.65  E-value: 2.49e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  59 GAIRFVGAVGHDAFGElalkQMREfGLDTGSVRVIDDVDTGmaiiqvEETGqnTIAVCA-----------GANARWSSAD 127
Cdd:PTZ00247  81 GFVCYVGCVGDDRFAE----ILKE-AAEKDGVEMLFEYTTK------APTG--TCAVLVcgkerslvanlGAANHLSAEH 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 128 ID--AYGADIAKARITLLQ---REVPHEANLAVAKAVRAAGGTVLLD-PAP-VGDA--SQMADLIALSDIISPNETEA-- 196
Cdd:PTZ00247 148 MQshAVQEAIKTAQLYYLEgffLTVSPNNVLQVAKHARESGKLFCLNlSAPfISQFffERLLQVLPYVDILFGNEEEAkt 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 197 -AEITGIEPTDLAS--AEAAG-RKLLERGPKIVILKLGSRGALLITADEVKHFTPFKV---KVVDTVAAGDSFNGGFAVA 269
Cdd:PTZ00247 228 fAKAMKWDTEDLKEiaARIAMlPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLdqeKIVDTNGAGDAFVGGFLAQ 307
                        250       260
                 ....*....|....*....|....*..
gi 552104401 270 FSQARPLHDCVRYSSAAGAIAVTRVGA 296
Cdd:PTZ00247 308 YANGKDIDRCVEAGHYSAQVIIQHNGC 334
PLN02813 PLN02813
pfkB-type carbohydrate kinase family protein
48-266 2.74e-08

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215434 [Multi-domain]  Cd Length: 426  Bit Score: 54.81  E-value: 2.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  48 ANQAVAVAKLGGA--------IRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVdTGMAIIQVEETGQNTIAVCAGA 119
Cdd:PLN02813 130 SNTLVALARLGSQsaagpalnVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGT-TGTVIVLTTPDAQRTMLSYQGT 208
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 120 NarwSSADIDAYGAD-IAKARITLLQR---EVPH--EANLAVAKAVRAAGGTVLLDPAPVGDAS----QMADLIALS-DI 188
Cdd:PLN02813 209 S---STVNYDSCLASaISKSRVLVVEGylwELPQtiEAIAQACEEAHRAGALVAVTASDVSCIErhrdDFWDVMGNYaDI 285
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 552104401 189 ISPNETEAAEITGIEPTDlaSAEAAGRKLLERGPkIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGF 266
Cdd:PLN02813 286 LFANSDEARALCGLGSEE--SPESATRYLSHFCP-LVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGI 360
pyridox_kin TIGR00687
pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal ...
183-286 1.02e-07

pyridoxal kinase; E. coli has an enzyme PdxK that acts in vitro as a pyridoxine/pyridoxal/pyridoxamine kinase, but mutants lacking PdxK activity retain a specific pyridoxal kinase, PdxY. PdxY acts in the salvage pathway of pyridoxal 5'-phosphate biosynthesis. Mammalian forms of pyridoxal kinase are more similar to PdxY than to PdxK. The PdxK isozyme is omitted from the seed alignment but scores above the trusted cutoff.ThiD and related proteins form an outgroup. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine]


Pssm-ID: 273221 [Multi-domain]  Cd Length: 287  Bit Score: 52.52  E-value: 1.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  183 IALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILK-LGSRGA--------LLITADEVKHF-TPFKVKV 252
Cdd:TIGR00687 136 IPVADIITPNQFELELLTGRRINTEEEALAAADALIAMGPDIVLVThLIRAGSqrdrsfegLVATQEGRWHIsRPLAVFD 215
                          90       100       110
                  ....*....|....*....|....*....|....
gi 552104401  253 VDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAA 286
Cdd:TIGR00687 216 PPPVGTGDLIAALLLATLLHGNSLKEALEKTVSA 249
Ketohexokinase cd01939
Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to ...
209-295 1.03e-07

Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose. KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.


Pssm-ID: 238914 [Multi-domain]  Cd Length: 290  Bit Score: 52.41  E-value: 1.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 209 SAEAAGRKLLERG--PKIVILKLGSRGALLITAD-EVKHFTPFK-VKVVDTVAAGDSFNGGFAVAFSQA-RPLHDCVRYS 283
Cdd:cd01939  197 SPEECLRGEGPRAkkAALLVCTWGDQGAGALGPDgEYVHSPAHKpIRVVDTLGAGDTFNAAVIYALNKGpDDLSEALDFG 276
                         90
                 ....*....|..
gi 552104401 284 SAAGAIAVTRVG 295
Cdd:cd01939  277 NRVASQKCTGVG 288
PRK06427 PRK06427
bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
160-281 4.12e-07

bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed


Pssm-ID: 180561 [Multi-domain]  Cd Length: 266  Bit Score: 50.51  E-value: 4.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 160 RAAGGTVLLDPApvGDASQMADLIALSDIISPNETEAAEITGIEPTDLASA-EAAGRKLLERGPKIVILKLGSRGA---- 234
Cdd:PRK06427 110 IAKSGDPLLADD--AVAALRERLLPLATLITPNLPEAEALTGLPIADTEDEmKAAARALHALGCKAVLIKGGHLLDgees 187
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 552104401 235 --LLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVR 281
Cdd:PRK06427 188 vdWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELAKGASLLDAVQ 236
MAK32 cd01943
MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the ...
187-295 4.69e-07

MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.


Pssm-ID: 238918 [Multi-domain]  Cd Length: 328  Bit Score: 50.42  E-value: 4.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 187 DIISPNETEAAEITGI---EPTDLASAEAAGRKLLE-----RGPKIVILKLGSRGALLITAD--EVKHFTPF---KVKVV 253
Cdd:cd01943  182 DVFSPNLEEAARLLGLptsEPSSDEEKEAVLQALLFsgilqDPGGGVVLRCGKLGCYVGSADsgPELWLPAYhtkSTKVV 261
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 552104401 254 DTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVG 295
Cdd:cd01943  262 DPTGGGNSFLGGFAAGLALTKSIDEACIYGSVAASFAIEQVG 303
PRK05756 PRK05756
pyridoxal kinase PdxY;
182-266 4.92e-07

pyridoxal kinase PdxY;


Pssm-ID: 235592 [Multi-domain]  Cd Length: 286  Bit Score: 50.25  E-value: 4.92e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 182 LIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILK--------LGSRGALLITADEVKHF-TPFKVKV 252
Cdd:PRK05756 135 ALPAADIITPNLFELEWLSGRPVETLEDAVAAARALIARGPKIVLVTslaragypADRFEMLLVTADGAWHIsRPLVDFM 214
                         90
                 ....*....|....
gi 552104401 253 VDTVAAGDSFNGGF 266
Cdd:PRK05756 215 RQPVGVGDLTSALF 228
ribokinase_group_D cd01937
Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ...
185-300 3.34e-06

Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238912 [Multi-domain]  Cd Length: 254  Bit Score: 47.40  E-value: 3.34e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 185 LSDIISPNETEAAEITgiEPTDLAsaeaagRKLLERGPKIVILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNG 264
Cdd:cd01937  155 LHDVLKLSRVEAEVIS--TPTELA------RLIKETGVKEIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLA 226
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 552104401 265 GFavafsqarplhdCVRYSSAAGAIAVTRVGAGAAA 300
Cdd:cd01937  227 AF------------LYSRLSGKDIKEAAEFAAAAAA 250
PLN02967 PLN02967
kinase
49-225 1.06e-05

kinase


Pssm-ID: 215521 [Multi-domain]  Cd Length: 581  Bit Score: 46.96  E-value: 1.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEETGQ---NTIAVCAGANARWSS 125
Cdd:PLN02967 248 GVAIALASLGGKVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRlktTCVKPCAEDSLSKSE 327
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 126 ADIDAygadIAKARI------TLLQREVPHEANLAVaKAVRAAGGTVLLD---PAPVGDASQMADLIA-----LSDIISP 191
Cdd:PLN02967 328 INIDV----LKEAKMfyfnthSLLDPTMRSTTLRAI-KISKKLGGVIFYDlnlPLPLWSSSEETKSFIqeawnLADIIEV 402
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 552104401 192 NETEAAEITGIEPTD-LASAEAAGRKLLERGPKIV 225
Cdd:PLN02967 403 TKQELEFLCGIEPTEeFDTKDNDKSKFVHYSPEVV 437
PTZ00344 PTZ00344
pyridoxal kinase; Provisional
179-228 1.94e-05

pyridoxal kinase; Provisional


Pssm-ID: 240372 [Multi-domain]  Cd Length: 296  Bit Score: 45.46  E-value: 1.94e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 552104401 179 MADLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILK 228
Cdd:PTZ00344 133 YRELIPYADVITPNQFEASLLSGVEVKDLSDALEAIDWFHEQGIPVVVIT 182
PLN02630 PLN02630
pfkB-type carbohydrate kinase family protein
225-295 4.57e-05

pfkB-type carbohydrate kinase family protein


Pssm-ID: 178237  Cd Length: 335  Bit Score: 44.41  E-value: 4.57e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 552104401 225 VILKLGSRGALLITADEVKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVG 295
Cdd:PLN02630 206 VIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLAVPDAALLGNYFGSLAVEQVG 276
PRK09954 PRK09954
sugar kinase;
12-290 2.58e-04

sugar kinase;


Pssm-ID: 182165 [Multi-domain]  Cd Length: 362  Bit Score: 42.23  E-value: 2.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  12 VFGSVNVDVSArMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLD-TGSV 90
Cdd:PRK09954  62 VVGAINMDIRG-MADIRYPQAASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSAIGDDFYGETLLEETRRAGVNvSGCI 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401  91 RViddvdtgmaiiqveeTGQNTIAVCAGANARWSSAdidaygadIAKARITLLQREVPHEANlAVAKAVRAAgGTVLLD- 169
Cdd:PRK09954 141 RL---------------HGQSTSTYLAIANRQDETV--------LAINDTHILQQLTPQLLN-GSRDLIRHA-GVVLADc 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 170 ---PAPVGDASQMADLIA-----------------LSDI--ISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVIL 227
Cdd:PRK09954 196 nltAEALEWVFTLADEIPvfvdtvsefkagkikhwLAHIhtLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFV 275
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 552104401 228 KLGSRgALLITADEVKHF--TPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIA 290
Cdd:PRK09954 276 YLPDE-SVFCSEKDGEQFllTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAAIS 339
PRK07105 PRK07105
pyridoxamine kinase; Validated
178-227 6.83e-04

pyridoxamine kinase; Validated


Pssm-ID: 180840 [Multi-domain]  Cd Length: 284  Bit Score: 40.67  E-value: 6.83e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 552104401 178 QMADLIALSDIISPNETEAAEITGiEPTDLASA-----EAAGRKLLERGPKIVIL 227
Cdd:PRK07105 130 EMRKLIQKADVITPNLTEACLLLD-KPYLEKSYseeeiKQLLRKLADLGPKIVII 183
PRK08573 PRK08573
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
108-230 3.48e-03

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 236297 [Multi-domain]  Cd Length: 448  Bit Score: 38.94  E-value: 3.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 108 TGQNTIAVCA------GANARWSSADIDAYGADIAKARItLLQREVPHeanlAVAKAVRAAGGTVLLDP-------APVG 174
Cdd:PRK08573  41 TAQNTYEVRAihdlppEVVAAQIEAVWEDMGIDAAKTGM-LSNREIIE----AVAKTVSKYGFPLVVDPvmiaksgAPLL 115
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 552104401 175 DASQMADLI----ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLER-GPKIVILKLG 230
Cdd:PRK08573 116 REDAVDALIkrllPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKYIVEElGAEAVVVKGG 176
PRK13508 PRK13508
tagatose-6-phosphate kinase; Provisional
188-271 4.21e-03

tagatose-6-phosphate kinase; Provisional


Pssm-ID: 237405 [Multi-domain]  Cd Length: 309  Bit Score: 38.17  E-value: 4.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 188 IISPNETEAAEITGIEPT-DLASAEAAGRKLLERGPKIVILKLGSRGALlitadeVKHFTPF------KVKVVDTVAAGD 260
Cdd:PRK13508 180 VIKPNIEELSQLLGKEVSeDLDELKEVLQQPLFEGIEWIIVSLGADGAF------AKHNDTFykvdipKIEVVNPVGSGD 253
                         90
                 ....*....|.
gi 552104401 261 SFNGGFAVAFS 271
Cdd:PRK13508 254 STVAGIASGLL 264
PLN02543 PLN02543
pfkB-type carbohydrate kinase family protein
48-105 6.39e-03

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215299  Cd Length: 496  Bit Score: 37.96  E-value: 6.39e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 552104401  48 ANQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQV 105
Cdd:PLN02543 176 SNVAISHVRLGGRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKI 233
PLN02898 PLN02898
HMP-P kinase/thiamin-monophosphate pyrophosphorylase
152-230 7.72e-03

HMP-P kinase/thiamin-monophosphate pyrophosphorylase


Pssm-ID: 215486 [Multi-domain]  Cd Length: 502  Bit Score: 37.83  E-value: 7.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 552104401 152 NLAVAKAVRAAGGTVLLDPAPVGDASQmaDLIALSDIISPNETEAAEITGIEPTD-LASAEAAGRKLLERGPKIVILKLG 230
Cdd:PLN02898 107 ALVVDPVMVSTSGDVLAGPSILSALRE--ELLPLATIVTPNVKEASALLGGDPLEtVADMRSAAKELHKLGPRYVLVKGG 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH