NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|553642319|gb|ESD61100|]
View 

arginine/agmatine antiporter [Escherichia coli 908524]

Protein Classification

arginine/agmatine antiporter( domain architecture ID 11484839)

arginine/agmatine antiporter exchanges extracellular arginine for its intracellular decarboxylation product agmatine (Agm) thereby expelling intracellular protons

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PRK10644 PRK10644
arginine/agmatine antiporter;
1-445 0e+00

arginine/agmatine antiporter;


:

Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 763.95  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   1 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRC 80
Cdd:PRK10644   1 MSSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRC 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
Cdd:PRK10644  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
Cdd:PRK10644 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 241 LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
Cdd:PRK10644 241 LSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 321 GTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIW 400
Cdd:PRK10644 321 GTPVAGLLIVGVLMTIFQLSSISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTLIAFVYCIW 400
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 553642319 401 AVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD 445
Cdd:PRK10644 401 AVVGSGAKEVMWSFVTLMVITAFYALNYNRLHKNPYPLDAPISKD 445
 
Name Accession Description Interval E-value
PRK10644 PRK10644
arginine/agmatine antiporter;
1-445 0e+00

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 763.95  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   1 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRC 80
Cdd:PRK10644   1 MSSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRC 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
Cdd:PRK10644  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
Cdd:PRK10644 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 241 LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
Cdd:PRK10644 241 LSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 321 GTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIW 400
Cdd:PRK10644 321 GTPVAGLLIVGVLMTIFQLSSISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTLIAFVYCIW 400
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 553642319 401 AVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD 445
Cdd:PRK10644 401 AVVGSGAKEVMWSFVTLMVITAFYALNYNRLHKNPYPLDAPISKD 445
his_histam_anti TIGR04298
histidine-histamine antiporter; Members of this protein family are antiporters that exchange ...
9-426 1.54e-119

histidine-histamine antiporter; Members of this protein family are antiporters that exchange histidine with histamine, product of histidine decarboxylation. A system consisting of this protein, and a histidine decarboxylase encoded by an adjacent gene, creates decarboxylation/antiport proton-motive cycle that provides a transient resistance to acidic conditions.


Pssm-ID: 213911  Cd Length: 429  Bit Score: 355.42  E-value: 1.54e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    9 KVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQ 88
Cdd:TIGR04298   1 KMGVIALTLVTASNMMGSGVFLLPTNLAGIGAISIFGWIFTIIGVIALALVFAKTSLIHERIGGIVAYARDAFGPFIGFQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   89 TNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLT----ITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVG 164
Cdd:TIGR04298  81 STIAYWISAWIGNVALLVAGVGYLAFFFPELKDPTVGTtygcIAAIIILWAFVFLASFGAKVAGRAQSFTAICGLAVILG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  165 IAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:TIGR04298 161 VGIFGWFWFKPEMYLEVINATGNSNFSAIIAAASIALWGFLGIESAVVSTGQVENPEKTVPKATVMGLLIAAVCYVASCT 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  245 AIMGMIPNAALRVSASPFGDAARMALGDT-AGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTP 323
Cdd:TIGR04298 241 VIAGIIPHEVLINSAAPFADAAKYMFDNElAGNIASALSIIACFGSISGWFILQSEAPRAAAEQGLFPKFFADLNKNDVP 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  324 VAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT---IAFLYCIW 400
Cdd:TIGR04298 321 MKSLIFTAILMCCVLLLTASPNLAEQFEIIILMSVFASLLPYLYAIIALPIILTAKKLKKDGNFKFHCLlvlIGIIYCIF 400
                         410       420
                  ....*....|....*....|....*.
gi 553642319  401 AVVGSGAKEVMWSFVTLMVITAMYAL 426
Cdd:TIGR04298 401 ALLGSGADSIFWGILLMMFMIPLFSF 426
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
9-426 8.95e-69

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 225.16  E-value: 8.95e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   9 KVGLIPVTLMVSGNIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGY 87
Cdd:COG0531   12 KLGLFDLVALGVGAIIGAGIFVLPGLAAGLaGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGF 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  88 QTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVltitCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAV 167
Cdd:COG0531   92 LAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLI----ALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 168 FGWFWFRGETYMAAWNVSGlgTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIM 247
Cdd:COG0531  168 VGLFAFDPANFTPFLPAGG--GLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALT 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 248 GMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAG 326
Cdd:COG0531  246 GVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHpRFGTPVNA 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 327 LIIVGILMTIFQLSSISPnatkeFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARP---AYLAVTTIAFLYCIWAVV 403
Cdd:COG0531  326 ILLTGVIALLLLLLGAAS-----FTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPfrvPLPLIPILGILLCLFLLY 400
                        410       420
                 ....*....|....*....|...
gi 553642319 404 GSGAKEVMWSFVTLMVITAMYAL 426
Cdd:COG0531  401 LLGPGALLIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
11-403 7.65e-31

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 123.19  E-value: 7.65e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   11 GLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTN 90
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   91 VLYWLACWIGNIAMVVIGVGYLSYFF--PILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL-ALIPIVGIAV 167
Cdd:pfam13520  82 WSNWFAYVLGLASSASVAASYLLSALgpDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILkLLLPLILIII 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  168 FGWFWFRGETY---MAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGvvKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:pfam13520 162 LGLVTADGGGFnllSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSE--EVKKRNVPKAIFIGVIIVGVLYILVNI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  245 AIMGMIP---NAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFP--PIFARVNK 319
Cdd:pfam13520 240 AFFGVVPddeIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVNK 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  320 AGTPVAGLIIVGILMTIfqLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAR-PAYLAVTTIAFLYC 398
Cdd:pfam13520 320 FGSPIRAIILTAILSLI--LLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRiPGRWPVAIFGILFS 397

                  ....*
gi 553642319  399 IWAVV 403
Cdd:pfam13520 398 LFLIV 402
 
Name Accession Description Interval E-value
PRK10644 PRK10644
arginine/agmatine antiporter;
1-445 0e+00

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 763.95  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   1 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRC 80
Cdd:PRK10644   1 MSSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRC 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
Cdd:PRK10644  81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
Cdd:PRK10644 161 PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 241 LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
Cdd:PRK10644 241 LSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 321 GTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIW 400
Cdd:PRK10644 321 GTPVAGLLIVGVLMTIFQLSSISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTLIAFVYCIW 400
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 553642319 401 AVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD 445
Cdd:PRK10644 401 AVVGSGAKEVMWSFVTLMVITAFYALNYNRLHKNPYPLDAPISKD 445
his_histam_anti TIGR04298
histidine-histamine antiporter; Members of this protein family are antiporters that exchange ...
9-426 1.54e-119

histidine-histamine antiporter; Members of this protein family are antiporters that exchange histidine with histamine, product of histidine decarboxylation. A system consisting of this protein, and a histidine decarboxylase encoded by an adjacent gene, creates decarboxylation/antiport proton-motive cycle that provides a transient resistance to acidic conditions.


Pssm-ID: 213911  Cd Length: 429  Bit Score: 355.42  E-value: 1.54e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    9 KVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQ 88
Cdd:TIGR04298   1 KMGVIALTLVTASNMMGSGVFLLPTNLAGIGAISIFGWIFTIIGVIALALVFAKTSLIHERIGGIVAYARDAFGPFIGFQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   89 TNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLT----ITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVG 164
Cdd:TIGR04298  81 STIAYWISAWIGNVALLVAGVGYLAFFFPELKDPTVGTtygcIAAIIILWAFVFLASFGAKVAGRAQSFTAICGLAVILG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  165 IAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:TIGR04298 161 VGIFGWFWFKPEMYLEVINATGNSNFSAIIAAASIALWGFLGIESAVVSTGQVENPEKTVPKATVMGLLIAAVCYVASCT 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  245 AIMGMIPNAALRVSASPFGDAARMALGDT-AGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTP 323
Cdd:TIGR04298 241 VIAGIIPHEVLINSAAPFADAAKYMFDNElAGNIASALSIIACFGSISGWFILQSEAPRAAAEQGLFPKFFADLNKNDVP 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  324 VAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT---IAFLYCIW 400
Cdd:TIGR04298 321 MKSLIFTAILMCCVLLLTASPNLAEQFEIIILMSVFASLLPYLYAIIALPIILTAKKLKKDGNFKFHCLlvlIGIIYCIF 400
                         410       420
                  ....*....|....*....|....*.
gi 553642319  401 AVVGSGAKEVMWSFVTLMVITAMYAL 426
Cdd:TIGR04298 401 ALLGSGADSIFWGILLMMFMIPLFSF 426
cadB PRK10435
cadaverine/lysine antiporter;
5-425 5.69e-112

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 336.34  E-value: 5.69e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   5 ADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRcFGPF 84
Cdd:PRK10435   2 SSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGSIAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGE-ISPA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVG 164
Cdd:PRK10435  81 FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 165 IAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:PRK10435 161 TAIVGWHWFDAATYAANWNTSDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQ 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 245 AIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPV 324
Cdd:PRK10435 241 VISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDKNGIPK 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 325 AGLIIVGILMTIFQ-----LSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLgHGHFGKARPAYLAvTTIAFLYCI 399
Cdd:PRK10435 321 KGLLLAAVKMTALMilitlMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRF-EGVNIRNFVSLIC-SVLGCVFCF 398
                        410       420
                 ....*....|....*....|....*.
gi 553642319 400 WAVVGSGAKEVMWSFVTLMVITAMYA 425
Cdd:PRK10435 399 IALMGASSFELAGTFIVSLIILMFYA 424
potE PRK10655
putrescine transporter; Provisional
5-413 1.34e-105

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 320.05  E-value: 1.34e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   5 ADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPF 84
Cdd:PRK10655   3 AKSNKMGVVQLTILTAVNMMGSGIIMLPTKLAQVGTISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVG 164
Cdd:PRK10655  83 GNFMANYTYGVSLLIANVAIAISAVGYGTELFGATLSPVQICLATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 165 IAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:PRK10655 163 LSIIGWFWFSPSLYVAAWNPHHLPFFSAVGSSIAMTLWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYIVSTN 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 245 AIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPV 324
Cdd:PRK10655 243 VIAGIVPNMELANSTAPFGLAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKIFSRVTKVDAPV 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 325 AGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLL---GHGHFGKARPAyLAVTTIAFLYCIWA 401
Cdd:PRK10655 323 QGMLIIVVIQSLLSLMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIqkvANVPPSKAKVA-NFIAFVGALYSFYA 401
                        410
                 ....*....|..
gi 553642319 402 VVGSGAKEVMWS 413
Cdd:PRK10655 402 LYSSGEEAMLYG 413
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
3-426 3.62e-98

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 302.36  E-value: 3.62e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    3 SDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARR 79
Cdd:TIGR00905   2 SEAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAgpGAVIIGWIITGVGMLALAFVFAILATKKPElDGGIYAYARE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   80 CFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157
Cdd:TIGR00905  82 GFGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGsgNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  158 ALIPIVGIAVFGWFWFRGETYMAAWN---VSGLGTFG-AIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVL 233
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWghdVPSLGSVFsQVKNTMLVTLWVFIGIEGAVVSSGRAKN-KSDVGKATVLGTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  234 IAAVCYVLSTTAIMGMIPNAALRVSASPFGDA-ARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPP 312
Cdd:TIGR00905 241 GALVIYILITLLSLGVLPQQELANLPNPSMAAvLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  313 IFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATkeFGLVSSVSVIFTLVPYLYTCAALLLLG--HGHFGKARPAYLAV 390
Cdd:TIGR00905 321 IFGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSA--YNVLVSLAVVMILVPYLLSAAYLLKLAkvGTYPKIKNRKALIV 398
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 553642319  391 TTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYAL 426
Cdd:TIGR00905 399 GVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGR 434
antiport_PotE TIGR04299
putrescine-ornithine antiporter; Members of this protein family are putrescine-ornithine ...
5-426 1.45e-76

putrescine-ornithine antiporter; Members of this protein family are putrescine-ornithine antiporter. They work together with an enzyme that decarboxylates ornithine to putrescine. This two-gene system has the net effect of removing a protein from the cytosol, providing transient resistance to acid conditions.


Pssm-ID: 213912  Cd Length: 430  Bit Score: 245.18  E-value: 1.45e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    5 ADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPF 84
Cdd:TIGR04299   1 AKKKKMSVVQLTILTAVNMMGSGIIMLPTNLAQVGTMSIISWLVTAVGAMALAWAFARAGMYSSKSGGMGGYAEYSFGKA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVG 164
Cdd:TIGR04299  81 GNFMANYTYGVSLVIANAAIAISAVGYGAELLGAHLSPVQIALATIGVLWIATVLNFGGARITGQISSFTVWGVIIPVVG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  165 IAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:TIGR04299 161 ISIIGWFWFSGTLYADSWNPHHAGFFSGVGSSISITLWAFLGLESACANTDVVENPKKNVPIAVLGGTIGAAVMYIISTN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  245 AIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPV 324
Cdd:TIGR04299 241 VIAGIVPNMELANSNAPFGLAFSQMFNPTVGKIVMGLMVISCFGSLLGWQFTIAEVFRSSADEGYFPKIFSKTIGNGTPL 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  325 AGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLA--VTTIAFLYCIWAV 402
Cdd:TIGR04299 321 IGMLIITILQSLLALMTISPSLSKQFTILVNLAVVTNIIPYILSMAALKTMQKVANVPPKGAKVTnfIAFVAALYSLYAL 400
                         410       420
                  ....*....|....*....|....
gi 553642319  403 VGSGAKEVMWSFVTLMVITAMYAL 426
Cdd:TIGR04299 401 YSSGEEAMLYGSIVTFAGWTLYGL 424
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
9-426 8.95e-69

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 225.16  E-value: 8.95e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   9 KVGLIPVTLMVSGNIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGY 87
Cdd:COG0531   12 KLGLFDLVALGVGAIIGAGIFVLPGLAAGLaGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGF 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  88 QTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVltitCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAV 167
Cdd:COG0531   92 LAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLI----ALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 168 FGWFWFRGETYMAAWNVSGlgTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIM 247
Cdd:COG0531  168 VGLFAFDPANFTPFLPAGG--GLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALT 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 248 GMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAG 326
Cdd:COG0531  246 GVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHpRFGTPVNA 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 327 LIIVGILMTIFQLSSISPnatkeFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARP---AYLAVTTIAFLYCIWAVV 403
Cdd:COG0531  326 ILLTGVIALLLLLLGAAS-----FTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPfrvPLPLIPILGILLCLFLLY 400
                        410       420
                 ....*....|....*....|...
gi 553642319 404 GSGAKEVMWSFVTLMVITAMYAL 426
Cdd:COG0531  401 LLGPGALLIGLVLLAIGLLLYLL 423
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
9-425 1.27e-49

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 175.24  E-value: 1.27e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    9 KVGLIPVTLMVSGNIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFL 85
Cdd:TIGR03810   2 KLGLGALTALVVGSMIGSGIFSLPSDMAAGAaaGAVLIGWVITGVGMLALAFSFQNLANKKPElDGGVYSYAKAGFGPFM 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   86 GYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD--PLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIV 163
Cdd:TIGR03810  82 GFISAWGYWLSAWLGNVAYATLLFSTLGYFFPIFGGgnNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVPLF 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  164 GIAVFGWFWFRGETYMAAW--NVSGLGTFGAI----QSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVLIAAV 237
Cdd:TIGR03810 162 VFIVIGIFAFKGDTFTNDFwgNANGGFSLGSVmtqvKNMMLVTVWVFIGIEGASMLSARAEK-RSDVGKATVIGLIGVLA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  238 CYVLSTTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFAR 316
Cdd:TIGR03810 241 IYVLVSVLSYGIMTQAQLAGLKNPsMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKYFGK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  317 VNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIftLVPYLYTCA-ALLLLGHGHFGKARPAYLAVTTIAF 395
Cdd:TIGR03810 321 ENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAI--LVPYLWSAAyQVKLSWRGGQERGRRKQLLIGLVAL 398
                         410       420       430
                  ....*....|....*....|....*....|
gi 553642319  396 LYCIWAVVGSGAKEVMWSFVTLMVITAMYA 425
Cdd:TIGR03810 399 LYAVWLIYAAGLKYLLLSAILYAPGIYFYA 428
AA_permease_2 pfam13520
Amino acid permease;
11-403 7.65e-31

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 123.19  E-value: 7.65e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   11 GLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTN 90
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   91 VLYWLACWIGNIAMVVIGVGYLSYFF--PILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL-ALIPIVGIAV 167
Cdd:pfam13520  82 WSNWFAYVLGLASSASVAASYLLSALgpDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILkLLLPLILIII 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  168 FGWFWFRGETY---MAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGvvKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:pfam13520 162 LGLVTADGGGFnllSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSE--EVKKRNVPKAIFIGVIIVGVLYILVNI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  245 AIMGMIP---NAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFP--PIFARVNK 319
Cdd:pfam13520 240 AFFGVVPddeIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVNK 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  320 AGTPVAGLIIVGILMTIfqLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAR-PAYLAVTTIAFLYC 398
Cdd:pfam13520 320 FGSPIRAIILTAILSLI--LLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRiPGRWPVAIFGILFS 397

                  ....*
gi 553642319  399 IWAVV 403
Cdd:pfam13520 398 LFLIV 402
frlA PRK11357
amino acid permease;
1-337 1.11e-29

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 119.96  E-value: 1.11e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   1 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGL---SMVYAKMSFLDPSPGGSYAYA 77
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVipqMCVYAELSTAYPENGADYVYL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  78 RRCFGPFLGYqtnvLYWLACWIGNIA-----MVVIGVGYLSYFFPIlkDPLVLTITCVVVLWIFVLLNIVGPKMITRVQA 152
Cdd:PRK11357  81 KNAGSRPLAF----LSGWASFWANDApslsiMALAIVSNLGFLTPI--DPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQT 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 153 VATVLALIPIVGIAVFGWFWFRGETYMAA--WNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIG 230
Cdd:PRK11357 155 LITIAKIIPFTIVIGLGIFWFKAENFAAPttTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIG 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 231 GVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARM--ALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDG 308
Cdd:PRK11357 235 SCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWipALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDN 314
                        330       340       350
                 ....*....|....*....|....*....|
gi 553642319 309 LFPPIFARVN-KAGTPVAGLIIVGILMTIF 337
Cdd:PRK11357 315 LFFKCFGHVHpKYNTPDVSIILQGALGIFF 344
AA_permease pfam00324
Amino acid permease;
15-363 1.03e-25

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 108.95  E-value: 1.03e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   15 VTLMVSGNIMGSGVFLLPANLASTGGI--AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVL 92
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPagALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   93 YWLaCWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFW 172
Cdd:pfam00324  82 YWL-SWITVLALELTAASILIQFWELVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  173 FRGE-----------TYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL 241
Cdd:pfam00324 161 LSGGnpndgaifrylGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  242 STTAIMGMIP------NAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFA 315
Cdd:pfam00324 241 SLLAIGLLVPwndpglLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 553642319  316 RVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLV 363
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIV 368
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
15-430 2.11e-20

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 93.26  E-value: 2.11e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFLlpanlASTGGIAIYG---WLVTIIGALGLSMVY---AKMSFLDPSPGGSYAYARRCFGPFLGYQ 88
Cdd:COG1113   22 IQMIALGGAIGTGLFL-----GSGKAIALAGpavLLSYLIAGLIVFLVMralGEMAVANPVSGSFSDYAREYLGPWAGFV 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  89 TNVLYWLaCWIGNIAMVVIGVG-YLSYFFPILkdPLVLTITCVVVlwIFVLLNIVGPK----------MITrvqaVATVL 157
Cdd:COG1113   97 TGWLYWF-FWVLVGMAEATAVGiYLQFWFPDV--PQWVWALVFLV--LLTAINLLSVKlfgefefwfaLIK----VVAIV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 158 ALIpIVGIA--VFGWFWFRGETYMAA--WNVSGL---GTFGAIQSTLnVTLWSFIGVESASVAAGVVKNPKRNVPIATIG 230
Cdd:COG1113  168 AFI-VVGLLliFFGFGLPGGPPAGLSnlWDHGGFfpnGIGGVLAALQ-IVVFAFGGIELVGIAAAEAKDPEKTIPKAINS 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 231 GVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSF---CAAAGCLGSlGGWTllAGQTAKAAADD 307
Cdd:COG1113  246 VIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFvvlTAALSSLNS-GLYS--TSRMLYSLAER 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 308 GLFPPIFARVNKAGTPVAGLII--VGILMTIFqLSSISPNatKEFGLVSSVSVIFTLVPYLYTCAALLLL--GHGHFGKA 383
Cdd:COG1113  323 GDAPKFFGKLSKRGVPVRAILLsaVVLLIGVV-LNYLLPE--KAFTFLLSISGFGALFVWLMILVSQLKFrrRLPREGAA 399
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 553642319 384 RPA-------YLAVTTIAFLYCIWAVVG---SGAKEVMWSFVTLMVITAMYALNYNR 430
Cdd:COG1113  400 ALKfkmpgfpYTSYLTLAFLAAVLVLMAfdpDTRIALIVGPVWLALLVVGYFLVRRR 456
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
9-341 2.58e-19

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 90.19  E-value: 2.58e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319    9 KVGLIPVTLMVSGNIMGSGVFLLPA---NLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFL 85
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKgvlKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   86 GYqtnvlywLACWIgniAMVVIGVG------------YLSYFFPILKDP-LVLTITCVVVLWIFVLLNIVGPKMITRVQA 152
Cdd:TIGR00911 123 AF-------LRLWI---ELLVIRPGsqavnalnfaiyILTPVFPDCEVPeWAIRLVAVLCVLLLTLVNCLSVKWATRVQD 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  153 VATVLALIPIVGIAVFGWFWF-RGETYMAAWNVSGLGT---FGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIAT 228
Cdd:TIGR00911 193 IFTACKLLALLLIIITGWVQLgKGGVESLNPKNAFEGTetsAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAI 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  229 IGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAgCLGSLGGWTLLAGQTAKAAADDG 308
Cdd:TIGR00911 273 IISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLS-CFGSVNGSLFSSSRLFFVGGREG 351
                         330       340       350
                  ....*....|....*....|....*....|....
gi 553642319  309 LFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSS 341
Cdd:TIGR00911 352 HLPSLLSMIHvKRLTPLPSLLIVCTLTLLMLFSG 385
PRK11021 PRK11021
putative transporter; Provisional
10-334 3.91e-18

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 85.73  E-value: 3.91e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  10 VGLIPVTLMvsgnimGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQ 88
Cdd:PRK11021   7 IGLLSTSLL------GTGVFAVPALAALVaGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  89 TNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLT-ITCVVVLWifvLLNIVGPKMITRVQAVATVLAlipivgIAV 167
Cdd:PRK11021  81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAeLLTLALLW---LLNLRGASSSANLQTVIALLI------VAL 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 168 FGWFWFRGETYMA--AWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTA 245
Cdd:PRK11021 152 VVAIWWAGDIKPAdiPFPAPGSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVV 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 246 IMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVA 325
Cdd:PRK11021 232 VLHFPAYGDKQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVPVN 311

                 ....*....
gi 553642319 326 GLIIVGILM 334
Cdd:PRK11021 312 ALNAVLGCC 320
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
21-377 4.02e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 83.71  E-value: 4.02e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   21 GNIMGSGVFLLPANLA--STGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACW 98
Cdd:TIGR00906  41 GSTIGAGIYVLTGEVArnDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGWNLILEYV 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   99 IGNIAmvvIGVGYLSYFFPILKDP-----------------LVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIP 161
Cdd:TIGR00906 121 IGTAA---VARSWSAYFDELLNKQigqfrrtyfklnydglaEYPDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILV 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  162 IVGIAVFGWFWFRGETYMAAWNvSGLGTF------GAIQSTlNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA 235
Cdd:TIGR00906 198 LLFVIIAGFTKADVANWSITEE-KGAGGFmpygftGVLSGA-ATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVC 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  236 AVCYVLSTTAIMGMIPNAALRvSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFA 315
Cdd:TIGR00906 276 FVAYFLMSAALTLMMPYYLLD-PDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLA 354
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 553642319  316 RVN-KAGTPVAGLIIVGILMTIFQLssispnATKEFGLVSSVSvIFTLVPYLYTCAALLLLGH 377
Cdd:TIGR00906 355 QINsKTKTPINATVVSGAIAALMAF------LFDLKALVDLLS-IGTLLAYSLVAACVLILRY 410
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
18-342 1.81e-14

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 75.21  E-value: 1.81e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  18 MVS-GNIMGSGVFLlpanlASTGGIAIYGWLVTIIG-ALGLSMVYAKMSFLD------PSPGGSYAYARRCFGPFLGYQT 89
Cdd:COG0833   21 MIAlGGVIGTGLFL-----ASGYTISQAGPGGALLAyLLGGLMVYFLMTSLGelavamPVSGSFQTYATRFIDPAFGFAV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  90 NVLYWLaCWIGNIAMVVIGVGYL-SYFFPILKDplvlTITCVVVLWIFVLLNIVGPK----------MITrvqaVATVLA 158
Cdd:COG0833   96 GWNYWL-NWAITVAAELTAAGIImQYWFPDVPV----WIWSLLFLALIFLLNALSVKafgesefwfsLIK----VITVIA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 159 LIPIVGIAVFGWF-----WFRGETYMAAWNVSGlgtFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIA---TIG 230
Cdd:COG0833  167 FIIVGLLMIFGIIgghapGFSNFTTGDGPFPGG---FLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAirqVFW 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 231 GVLIaavCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSF--------CAAAGCLGS---LggWTLlagq 299
Cdd:COG0833  244 RILL---FYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAviltavlsAGNSGLYAStrmL--WSL---- 314
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 553642319 300 takaaADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSI 342
Cdd:COG0833  315 -----AKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSF 352
PRK11387 PRK11387
S-methylmethionine permease;
21-404 4.74e-14

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 73.73  E-value: 4.74e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  21 GNIMGSGVFLLPANLASTGGiAIYGWLVTIIGALGLSMVYA---KMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLAc 97
Cdd:PRK11387  27 GGVIGTGLFFNTGYIISTTG-AAGTLLAYLIGALVVYLVMQclgELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLT- 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  98 WIGNIAMVVIGVGY-LSYFFPILKDPLVLTITCVVVLwifvLLNIVGPKMITR------VQAVATVLALIPIVGIAVFGW 170
Cdd:PRK11387 105 WTVALGSSLTAAGFcMQYWFPQVPVWPWCLLFCALIF----GLNVVSTRFFAEgefwfsLIKVVTILAFIVLGGAAIFGF 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 171 FWFR-GETYMAAWNVSGLGTFGA----IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTA 245
Cdd:PRK11387 181 IPMQdGSPAPGLRNLTAEGWFPHgglpILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGTVLV 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 246 IMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVA 325
Cdd:PRK11387 261 LAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLT 340
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 326 GLII--VGILMTIFQlSSISPNATkeFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAR---------PAYLAVTTIA 394
Cdd:PRK11387 341 ALSVsmLGGLLALFS-SVVAPDTV--FVALSAISGFAVVAVWLSICASHFMFRRRHLRDGKalselayraPWYPLTPILG 417
                        410
                 ....*....|
gi 553642319 395 FLYCIWAVVG 404
Cdd:PRK11387 418 FVLCLLACVG 427
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
15-369 1.52e-11

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 66.15  E-value: 1.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   15 VTLMVSGNIMGSGVFLLPANLASTGGIA--IYGWLvtIIGALGLSMVYA--KMSFLDPSPGGSYA-YARRCFGPFLGYQT 89
Cdd:TIGR00913   9 IQMIALGGTIGTGLLVGSGTALATGGPAglLIGYA--IMGSIIYCVMQSlgEMATFYPVVSGSFAtYASRFVDPAFGFAV 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   90 NVLYWLACWIGNIAMVVIGVGYLSYFfpilKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG 169
Cdd:TIGR00913  87 GWNYWLQWLIVLPLELVTASMTIQYW----TDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  170 WFWFRG----ETYMAA--WNVSG-------LGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAA 236
Cdd:TIGR00913 163 IILNCGggpnHGYIGFryWHDPGafaggtiGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  237 VCYVLSTTAIMGMIP---------NAALRVSASPFGDAAR----MALGDTAGAIVSFCAAAGCLGSL--GGWTLLagqta 301
Cdd:TIGR00913 243 VFYILTLFLIGFLVPyndprllssSSSSDSAASPFVIAIQnhgiKVLPHIFNAVILISVLSAANSSLyaSSRTLY----- 317
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 553642319  302 kAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSiSPNATKEFGLVSSVSVIFTLVPYLYTC 369
Cdd:TIGR00913 318 -ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAV-SKKEAEVFTWLLNISGLSGFFTWMCIC 383
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
82-372 1.58e-11

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 65.91  E-value: 1.58e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  82 GPFLGYQTNVLYWLaCW-IGNIAMVVIGVGYLSYFFPILkDPLVLTITCVVVLwifVLLNIVGPKMITRVQ------AVA 154
Cdd:PRK11049  95 GPWAGYFTGWTYWF-CWvVTGIADVVAITAYAQFWFPDL-SDWVASLAVVLLL---LSLNLATVKMFGEMEfwfamiKIV 169
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 155 TVLALIpIVGIAVFGWFWFRGETYMAA----WNVSGL------GTFGAIQstlnVTLWSFIGVESASVAAGVVKNPKRNV 224
Cdd:PRK11049 170 AIVALI-VVGLVMVAMHFQSPTGVEASfahlWNDGGMfpkglsGFFAGFQ----IAVFAFVGIELVGTTAAETKDPEKSL 244
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 225 PIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA 304
Cdd:PRK11049 245 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGL 324
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 305 ADDGLFPPIFARVNKAGTPVAGLIIVGI-LMTIFQLSSISPNATKEFGLVSSVS-VIFTLVPYLYTCAAL 372
Cdd:PRK11049 325 AQEGVAPKAFAKLSKRAVPAKGLTFSCIcLLGGVVLLYVNPSVIGAFTLVTTVSaILFMFVWTIILCSYL 394
PRK10249 PRK10249
phenylalanine transporter; Provisional
15-373 2.37e-11

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 65.39  E-value: 2.37e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFL-LPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
Cdd:PRK10249  28 IQLIALGGAIGTGLFLgIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNY 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  94 WLACWIGNIAMVVIGVGYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG-WFW 172
Cdd:PRK10249 108 WVMFVLVGMAELTAAGIYMQYWFP----DVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGlWLL 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 173 FRGETYMAA-----WNVSGL---GTFGAIQStLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTT 244
Cdd:PRK10249 184 FSGHGGEKAsidnlWRYGGFfatGWNGLILS-LAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLV 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 245 AIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPV 324
Cdd:PRK10249 263 VLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPI 342
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 553642319 325 AGLIIVGILMTIFQL-SSISPNatKEFGLVSSVSVIFTLVPYLYTCAALL 373
Cdd:PRK10249 343 NSLMLSGAITSLVVLiNYLLPQ--KAFGLLMALVVATLLLNWIMICLAHL 390
PRK10746 PRK10746
putative transport protein YifK; Provisional
15-399 8.93e-09

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 57.14  E-value: 8.93e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFLLPAN-LASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
Cdd:PRK10746  17 IELIALGGTIGVGLFMGAAStLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  94 WLAcWI--GNIAMVVIGVgYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQ------AVATVLALIpIVGI 165
Cdd:PRK10746  97 WFM-WMavGISEITAIGV-YVQFWFP----EMAQWIPALIAVALVALANLAAVRLYGEIEfwfamiKVTTIIVMI-VIGL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 166 AVFGWFWFRGETYMAAWNVSGLGTFGA-----IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV 240
Cdd:PRK10746 170 GVIFFGFGNGGQSIGFSNLTEHGGFFAggwkgFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 241 LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKA 320
Cdd:PRK10746 250 GAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRH 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 321 GTPVAGLII-VGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGH--------FGKARPAYLAVT 391
Cdd:PRK10746 330 GVPVAGVAVsILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHkaaiashpFRSILFPWANYL 409

                 ....*...
gi 553642319 392 TIAFLYCI 399
Cdd:PRK10746 410 TMAFLICV 417
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
202-383 9.77e-07

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 50.90  E-value: 9.77e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  202 WSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV---CYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIV 278
Cdd:TIGR00907 228 WSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAIGIVtgfCFNIVLFFSMGDIDSLISSTTGQPIAQIFYNALGNKAGAIF 307
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  279 SFCAAAGCLGSLGGWTLLAG-QTAKAAADDGLFP--PIFARVNK-AGTPVAGLIIVGILMTIFQLssISPNATKEFGLVS 354
Cdd:TIGR00907 308 LLCLILVTSFFCAITCMTANsRMIYAFSRDGGLPfsPLWSRVNPrTQVPLNAVWLSAVWIILIGL--LGLGSSTAFQAIF 385
                         170       180
                  ....*....|....*....|....*....
gi 553642319  355 SVSVIFTLVPYLYTCAALLLLGHGHFGKA 383
Cdd:TIGR00907 386 SVCTVALDVSYVIPIICKLAKGRNTIAPG 414
proY PRK10580
putative proline-specific permease; Provisional
15-344 5.22e-06

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 48.66  E-value: 5.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFLLPANLASTGGIAIY-GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
Cdd:PRK10580  16 IRFMALGSAIGTGLFYGSADAIKMAGPSVLlAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTY 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  94 WLACWIGNIAMVVIGVGYLSYFFPILKDplvlTITCVVVLWIFVLLNIVGPKMITRVQ------AVATVLALIpIVGIAV 167
Cdd:PRK10580  96 CFEILIVAIADVTAFGIYMGVWFPTVPH----WIWVLSVVLIICAVNLMSVKVFGELEfwfsffKVATIIIMI-VAGIGI 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 168 FGWFWFRGETYMAAWNVSGLGTF------GAIQStLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL 241
Cdd:PRK10580 171 IIWGIGNGGQPTGIHNLWSNGGFfsngwlGMVMS-LQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVG 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 242 STTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAG 321
Cdd:PRK10580 250 TLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRG 329
                        330       340
                 ....*....|....*....|....
gi 553642319 322 TP-VAGLIIVGILMTIFQLSSISP 344
Cdd:PRK10580 330 IPwVTVLVMTTALLFAVYLNYIMP 353
2a30 TIGR00930
K-Cl cotransporter; [Transport and binding proteins, Other]
71-286 4.13e-04

K-Cl cotransporter; [Transport and binding proteins, Other]


Pssm-ID: 273347 [Multi-domain]  Cd Length: 953  Bit Score: 42.78  E-value: 4.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319   71 GGSYAYARRCFGPFLGYQTNVLYWLACWIGnIAMVVigVGYLSYFFPILK--------DPLV-LTITCVVVLWIFVLLNI 141
Cdd:TIGR00930 143 GGAYYLISRSLGPEFGGSIGLIFAFANAVA-VAMYV--VGFAETVLDLLRengskimvDPINdIRIYGTVTVVVLLGISF 219
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  142 VGPKMITRVQAVATVLALIPIVGIAV-----------FGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESA 210
Cdd:TIGR00930 220 AGMEWENKAQVLFLVIVLLSILNIFVgtiipafdkpaKGFFGLGNEIFSENFIPGIPGPEGGFFSLFGIFFPSVTGILAG 299
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 553642319  211 SVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIpnaalrvsaspfgdaARMALGDTAGAIVSFCAAAGC 286
Cdd:TIGR00930 300 ANISGDLKDPQKAIPKGTLLAILTTTVVYLGSVVLFGACV---------------VRDATGDKNDTLVTNCTSAAC 360
PRK10197 PRK10197
GABA permease;
35-251 1.54e-03

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 40.76  E-value: 1.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  35 LASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWlacwigniamvvigvgylsy 114
Cdd:PRK10197  20 IAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW-------------------- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 115 FFPILKDPLVLTITCVVV--------LWIFVL---LNIVGPKMIT-----------RVQAVATVLALIPIVGIAVFGWFW 172
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILhswvpgipIWLFSLvitLALTGSNLLSvknygefefwlALCKVIAILAFIFLGAVAISGFYP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 173 FRGETYMAA-WNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGM 249
Cdd:PRK10197 160 YAEVSGISRlWDSGGFmpNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239

                 ..
gi 553642319 250 IP 251
Cdd:PRK10197 240 IP 241
PRK15049 PRK15049
L-asparagine permease;
15-328 1.75e-03

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 40.76  E-value: 1.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFL-LPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
Cdd:PRK15049  35 VQMIAIGGAIGTGLFLgAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMY 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  94 WLACWIGNIAMVVIGVGYLSYFFPILKDPLvlTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFwF 173
Cdd:PRK15049 115 FINWAMTGIVDITAVALYMHYWGAFGGVPQ--WVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTV-F 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 174 RGETYMAAWNVSGL------GTF---GAIQSTLNV--TLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLS 242
Cdd:PRK15049 192 LGSGQPLDGNTTGFhlitdnGGFfphGLLPALVLIqgVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGS 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319 243 TTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGT 322
Cdd:PRK15049 272 VVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQHV 351

                 ....*.
gi 553642319 323 PVAGLI 328
Cdd:PRK15049 352 PYAGIL 357
CodB COG1457
Purine-cytosine permease or related protein [Nucleotide transport and metabolism];
15-168 5.16e-03

Purine-cytosine permease or related protein [Nucleotide transport and metabolism];


Pssm-ID: 441066 [Multi-domain]  Cd Length: 448  Bit Score: 39.08  E-value: 5.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 553642319  15 VTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGA----LGLSMvyakmsfldpspggsYAYARRCFGPFLGYQTN 90
Cdd:COG1457   45 LATFVIGALLGLGLGFWQALLAILLGNLIGFLLGALIAYigarTGLPT---------------MLLSRAAFGYRGSTLPS 109
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 553642319  91 VLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLwiFVLLNIVGPKMITRVQAVATVLALIPIVGIAVF 168
Cdd:COG1457  110 LLNALTTIGWFAVEAAIAAQALAALLGGLGIPLVLAYLIVGLL--VILLAIFGYRAISRLQRWAVPLLLVLFVLLVVL 185
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH