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Conserved domains on  [gi|576713583|gb|EUB85509|]
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amine oxidase [Pseudomonas sp. GM30]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11465281)

NAD(P)/FAD-dependent oxidoreductase such as polyamine oxidase (PAO), flavin-containing monoamine oxidases (MAOs), D-amino acid dehydrogenase, and linoleic acid isomerase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
1-328 7.68e-140

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


:

Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 398.87  E-value: 7.68e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSLGWVAE 80
Cdd:COG3380    2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRLDGGRFDHGAQYFTARDPRFQALVEEWLAAGLVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  81 WTPQLYTFQGGQL-NLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVFRGEEHWHLQDAEGFTHGPFSHVVIATP 159
Cdd:COG3380   82 WTFDFVVLDADGLvSPRDDGEPRYVGVPGMNALAKHLAAGLDVRLGTRVTALERDGDGWRLTDEDGEEYGPFDAVVLAIP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 160 APQATA--LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSPIDWLARNRSKPGRDTTcDTWVLHASSAW 237
Cdd:COG3380  162 APQAAAllEPSLAPELAAALASVRYRPCWAVMLGFDQPLDPDWDAAFVDDGPLAWIARDSSKPGRPGE-EAWVLHASPEW 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 238 SRQHIDLSKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPATGHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQ 317
Cdd:COG3380  241 SREHLDDDPEEVAAALLAAFAELLGLPLAEPDWAQAHRWRYALPEAPLGAPFLWDADLGLGLCGDWCAGGRVEGAWLSGL 320

                        330
                 ....*....|.
gi 576713583 318 EAARRLHEHLQ 328
Cdd:COG3380  321 ALARALLARLA 331
 
Name Accession Description Interval E-value
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
1-328 7.68e-140

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 398.87  E-value: 7.68e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSLGWVAE 80
Cdd:COG3380    2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRLDGGRFDHGAQYFTARDPRFQALVEEWLAAGLVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  81 WTPQLYTFQGGQL-NLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVFRGEEHWHLQDAEGFTHGPFSHVVIATP 159
Cdd:COG3380   82 WTFDFVVLDADGLvSPRDDGEPRYVGVPGMNALAKHLAAGLDVRLGTRVTALERDGDGWRLTDEDGEEYGPFDAVVLAIP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 160 APQATA--LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSPIDWLARNRSKPGRDTTcDTWVLHASSAW 237
Cdd:COG3380  162 APQAAAllEPSLAPELAAALASVRYRPCWAVMLGFDQPLDPDWDAAFVDDGPLAWIARDSSKPGRPGE-EAWVLHASPEW 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 238 SRQHIDLSKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPATGHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQ 317
Cdd:COG3380  241 SREHLDDDPEEVAAALLAAFAELLGLPLAEPDWAQAHRWRYALPEAPLGAPFLWDADLGLGLCGDWCAGGRVEGAWLSGL 320

                        330
                 ....*....|.
gi 576713583 318 EAARRLHEHLQ 328
Cdd:COG3380  321 ALARALLARLA 331
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
7-69 4.84e-12

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 60.62  E-value: 4.84e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 576713583    7 IIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEV 69
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFHGSDEPNVRDL 63
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 5-61 4.31e-07

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 51.00  E-value: 4.31e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQAL--TEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTAR 61
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLhkKGPDADITLLEASDRLGGKIQTVRKDGFPIELGPESFLAR 61
 
Name Accession Description Interval E-value
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
1-328 7.68e-140

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 398.87  E-value: 7.68e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSLGWVAE 80
Cdd:COG3380    2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRLDGGRFDHGAQYFTARDPRFQALVEEWLAAGLVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  81 WTPQLYTFQGGQL-NLSPDEQTRWVGTPRMSAITRGLLDGLEVHFACRITEVFRGEEHWHLQDAEGFTHGPFSHVVIATP 159
Cdd:COG3380   82 WTFDFVVLDADGLvSPRDDGEPRYVGVPGMNALAKHLAAGLDVRLGTRVTALERDGDGWRLTDEDGEEYGPFDAVVLAIP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 160 APQATA--LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDTPIEGCFVQDSPIDWLARNRSKPGRDTTcDTWVLHASSAW 237
Cdd:COG3380  162 APQAAAllEPSLAPELAAALASVRYRPCWAVMLGFDQPLDPDWDAAFVDDGPLAWIARDSSKPGRPGE-EAWVLHASPEW 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 238 SRQHIDLSKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWLYARPATGHEWGTLADADLGLYACGDWCLSGRVEGAWLSGQ 317
Cdd:COG3380  241 SREHLDDDPEEVAAALLAAFAELLGLPLAEPDWAQAHRWRYALPEAPLGAPFLWDADLGLGLCGDWCAGGRVEGAWLSGL 320

                        330
                 ....*....|.
gi 576713583 318 EAARRLHEHLQ 328
Cdd:COG3380  321 ALARALLARLA 331
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
7-69 4.84e-12

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 60.62  E-value: 4.84e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 576713583    7 IIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFVTEV 69
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFHGSDEPNVRDL 63
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 12-324 1.04e-10

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 62.12  E-value: 1.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   12 IAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFT-------------------------------- 59
Cdd:pfam01593   1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHgaqppllallkelgledrlvlpdpapfytvlf 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   60 ARDRRFVTEVQRWQ----------------------------------------SLGWVAE------------------W 81
Cdd:pfam01593  81 AGGRRYPGDFRRVPagwegllefgrllsipeklrlglaalasdaldefdlddfsLAESLLFlgrrgpgdvevwdrlidpE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   82 TPQLYTFQGGQLNLSPDEQTR-----------------WVGTPRMSAITRGL---LDGLEVHFACRITEV-FRGEEHW-H 139
Cdd:pfam01593 161 LFAALPFASGAFAGDPSELSAglalpllwallgeggslLLPRGGLGALPDALaaqLLGGDVRLNTRVRSIdREGDGVTvT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  140 LQDAEGFThgpFSHVVIATPAP---QATALLAAAPKLAGAAAGVKMDPTWAVALAFDTPLdTPIEGCFVQDSPI------ 210
Cdd:pfam01593 241 LTDGEVIE---ADAVIVTVPLGvlkRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKF-WPDLGLLGLLSELltglgt 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  211 --DWLA-RNRSKPGRDTTCDTWVLHAssAWSRQHIDLSKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWL---------- 277
Cdd:pfam01593 317 afSWLTfPNRAPPGKGLLLLVYVGPG--DRARELEGLSDEELLQAVLRDLRKLFGEEAPEPLRVLVSDWHtdpwprgsys 394

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|..
gi 576713583  278 YARPATGHEW--GTLADADLGLYACGDWC---LSGRVEGAWLSGQEAARRLH 324
Cdd:pfam01593 395 LPQYGPGHDDyrPLARTPDPGLFFAGEHTstgYPGTVEGAIESGRRAARAVL 446
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
5-327 2.41e-09

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 58.01  E-value: 2.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSL--DMGAQYF------------------------ 58
Cdd:COG1231   10 VVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLyaELGAMRIppshtnllalarelglplepfpne 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  59 -----------TAR------------------DRRFVTEVQRWQSL--------------------------------GW 77
Cdd:COG1231   90 ngnallylggkRVRageiaadlrgvaellaklLRALAAALDPWAHPaaeldreslaewlrrngaspsarrllgllgagEY 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  78 VAEWTPQ--LYTFQGGQLNLSPDEQTRWVGTprMSAITRGLLDGLE--VHFACRITEVFRGEEHWHLQDAEGFTHGpFSH 153
Cdd:COG1231  170 GADPDELslLDLLRYAASAGGGAQQFRIVGG--MDQLPRALAAELGdrIRLGAPVTRIRQDGDGVTVTTDDGGTVR-ADA 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 154 VVIATPAPQATA---LLAAAPKLAGAAAGVKMDPTWAVALAFDTPL---DTPIEGCFVQDSPIDWLARNRskPGRDTTCD 227
Cdd:COG1231  247 VIVTVPPSVLRRiefDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFweeDGLYGGISLTDLPIRQTWYPS--NGPDGGAG 324

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 228 TWVLHASSAWSRQHIDLSKEAVIEQLHGAFAELLHSAMPAPTFSLAHRWL----------YARPATGHEWG-TLADADLG 296
Cdd:COG1231  325 VLLGYVGGDDARALAALSPEERVAAALEQLARIFGVYAAEPVDYVSTDWGrdpwsrgayaAAPPGQLTAAGpALAEPDGR 404

                        410       420       430
                 ....*....|....*....|....*....|....
gi 576713583 297 LYACGDWC---LSGRVEGAWLSGQEAARRLHEHL 327
Cdd:COG1231  405 IHFAGEHTsdeWPGWVEGALESGERAAAEILARL 438
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 3-76 9.49e-08

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 53.30  E-value: 9.49e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 576713583   3 VPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARDRRFvteVQRWQSLG 76
Cdd:COG1232    2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFLTRDPEV---LELLRELG 72
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 5-61 4.31e-07

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 51.00  E-value: 4.31e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQAL--TEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTAR 61
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLhkKGPDADITLLEASDRLGGKIQTVRKDGFPIELGPESFLAR 61
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 5-39 4.64e-07

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 50.93  E-value: 4.64e-07
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGG 39
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERADRIGG 180
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 1-327 6.48e-07

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 50.62  E-value: 6.48e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSS-KRSDAG-SLDMG------------------------ 54
Cdd:COG3349    2 MPPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSfPDPDTGlPIDNGqhvllgcyrntldllrrigaadnl 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  55 -----------------------------------AQYFTARDR----RFVTEVQRWQSLGW----VAEW------TPQL 85
Cdd:COG3349   82 vgpeplqfplpggrrwtlraprlpaplhllrallrAPGLSLADRlallRLLTACRERRWRELddisVADWlrrhgqSPRL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  86 Y------TFQGGqLNLSPDE---------------QTRWVGTPRMsaITRGLLD-------------GLEVHFACRITEV 131
Cdd:COG3349  162 IrrlwepLLLAA-LNTPPEQasarlaltvlretllAGPAASDLLV--PRGPLSElfvdpalaylearGGEVRLGTRVRAL 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 132 FRGEEHWHLQDAEGFTHGPFSHVVIATPAPQATALLAAAPKLAGAAAGVKMDPTW--AVALAFDTPLDTPIEGCF-VQDS 208
Cdd:COG3349  239 EFDGGRVTGLVLADGETVPADAVVLAVPPEVAARLLPELARLPELGLLAPLEYSPivNVHLWLDRPVTLGPPPFAgLVGS 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583 209 PIDWL-ARNRSKPGRDttcdtWVLHASSAWSRQHIDLSKEAVIEQLHGAFAELL---HSAMP---------APTFSLAHR 275
Cdd:COG3349  319 TSQWVfDRGAGDGGQG-----GVLSVVISAADRLLDLSREELAAEVWAELAALLpaaREALPvwsrvvrekRATFAATPG 393

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 576713583 276 WLYARPATGHEWGtladadlGLYACGDW-------CLsgrvEGAWLSGQEAARRLHEHL 327
Cdd:COG3349  394 SDRLRPGARTPIP-------NLFLAGDWtatglpaTM----EGAVRSGRRAANAILARL 441
PRK07233 PRK07233
hypothetical protein; Provisional
 5-52 1.39e-06

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 49.50  E-value: 1.39e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLD 52
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFEFGGLPIE 49
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 1-78 2.23e-06

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 49.08  E-value: 2.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQYFTARD--RRFVTEVQRWQSLGWV 78
Cdd:COG1233    2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGvlERLFRELGLEDYLELV 81
PRK06753 PRK06753
hypothetical protein; Provisional
 5-33 4.60e-06

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 47.76  E-value: 4.60e-06
                         10        20
                 ....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDK 33
Cdd:PRK06753   3 IAIIGAGIGGLTAAALLQEQGHEVKVFEK 31
PLN02487 PLN02487
zeta-carotene desaturase
 5-58 6.09e-06

zeta-carotene desaturase


Pssm-ID: 215268 [Multi-domain]  Cd Length: 569  Bit Score: 47.87  E-value: 6.09e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSS-KRSDAGSLDMGAQYF 58
Cdd:PLN02487  78 VAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSfVDKNGNHIEMGLHVF 132
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 2-39 9.44e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 46.78  E-value: 9.44e-06
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 576713583   2 TVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGG 39
Cdd:COG2072    6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
1-158 1.23e-05

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 46.44  E-value: 1.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDK-------SRGSGGRMSSKRSDAGSLDMGAQYFTARDR---------- 63
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERgrpgsgaSGRNAGQLRPGLAALADRALVRLAREALDLwrelaaelgi 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  64 --------------------RFVTEVQRWQSLGWVAEWtpqlytfqggqlnLSPDEQTR---WVGTPRM----------- 109
Cdd:COG0665   81 dcdfrrtgvlylarteaelaALRAEAEALRALGLPVEL-------------LDAAELRErepGLGSPDYagglydpddgh 147

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 576713583 110 ---SAITRGLLD-----GLEVHFACRITEVFRGEEHWH-LQDAEGFTHGPfsHVVIAT 158
Cdd:COG0665  148 vdpAKLVRALARaaraaGVRIREGTPVTGLEREGGRVTgVRTERGTVRAD--AVVLAA 203
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 5-33 1.96e-05

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 45.90  E-value: 1.96e-05
                         10        20
                 ....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDK 33
Cdd:COG0493  124 VAVVGSGPAGLAAAYQLARAGHEVTVFEA 152
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 5-158 3.34e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 45.08  E-value: 3.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583    5 IAIIGTGIAGLSAAQALTEAGHTVQLFDK--------SRGSGGRMSSKRSDAGSLDMGAQYFTARDR------------- 63
Cdd:pfam01266   2 VVVIGGGIVGLSTAYELARRGLSVTLLERgddpgsgaSGRNAGLIHPGLRYLEPSELARLALEALDLweeleeelgidcg 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   64 ----------------RFVTEVQRWQSLGWVAEW---------TPQLYTFQGGqlNLSPDEqtrwvGTPRMSAITRGLLD 118
Cdd:pfam01266  82 frrcgvlvlardeeeeALEKLLAALRRLGVPAELldaeelrelEPLLPGLRGG--LFYPDG-----GHVDPARLLRALAR 154

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 576713583  119 -----GLEVHFACRITEVFRGEEHWHLQdaegfTHGPFSHVVIAT 158
Cdd:pfam01266 155 aaealGVRIIEGTEVTGIEEEGGVWGVV-----TTGEADAVVNAA 194
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 5-41 7.67e-05

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 44.33  E-value: 7.67e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRM 41
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMM 232
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 5-33 8.00e-05

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 44.01  E-value: 8.00e-05
                         10        20
                 ....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDK 33
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEA 171
PLN02268 PLN02268
probable polyamine oxidase
 7-57 9.50e-05

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 43.91  E-value: 9.50e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 576713583   7 IIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSLDMGAQY 57
Cdd:PLN02268   5 VIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHTDYSFGFPVDMGASW 55
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 1-145 1.25e-04

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 43.00  E-value: 1.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRG--SGGRmsskrsdAGSLDMGAQYFTAR---DRRFVTEVQRWQSL 75
Cdd:COG0654    2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPprPDGR-------GIALSPRSLELLRRlglWDRLLARGAPIRGI 74

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 576713583  76 GWVAEWTPQLYTfqggQLNLSPDEQTRWVGTPRmSAITRGLLD-----GLEVHFACRITEVFRGEEHWHLQDAEG 145
Cdd:COG0654   75 RVRDGSDGRVLA----RFDAAETGLPAGLVVPR-ADLERALLEaaralGVELRFGTEVTGLEQDADGVTVTLADG 144
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
5-39 1.30e-04

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 43.18  E-value: 1.30e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 576713583   5 IAIIGTGIAGLSAAQALTEAgHTVQLFDKSRGSGG 39
Cdd:COG2907    6 IAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
PRK07208 PRK07208
hypothetical protein; Provisional
 1-112 1.43e-04

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 43.34  E-value: 1.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGrMSSKRSDAG-SLDMGAQyftardrRFVTEVQRWQSLgwva 79
Cdd:PRK07208   3 NKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGG-ISRTVTYKGnRFDIGGH-------RFFSKSPEVMDL---- 70

                         90       100       110
                 ....*....|....*....|....*....|...
gi 576713583  80 eWTpqlytfqggqlNLSPDEQtrWVGTPRMSAI 112
Cdd:PRK07208  71 -WN-----------EILPDDD--FLLRPRLSRI 89
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 5-41 2.44e-04

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 42.55  E-value: 2.44e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRM 41
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMM 176
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
5-41 3.27e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.15  E-value: 3.27e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRM 41
Cdd:COG1148  143 ALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRA 179
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 5-158 4.89e-04

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 41.76  E-value: 4.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDK-----SRGSGGR-------MSSKRSDAGSLDMGAQYFTardRRFVTEVQRW 72
Cdd:PRK01747 263 AAIIGGGIAGAALALALARRGWQVTLYEAdeapaQGASGNRqgalyplLSKDDNALSRFFRAAFLFA---RRFYDALPAA 339

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 576713583  73 QS-----------LGW------------VAEWTPQLYTFqggqlnLSPDEQTRWVGTP--------------RMSAITRG 115
Cdd:PRK01747 340 GVafdhdwcgvlqLAWdeksaekiakmlALGLPAELARA------LDAEEAEELAGLPvpcggifypqggwlCPAELCRA 413

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 576713583 116 LL----DGLEVHFACRITEVFRGEEHWHLQDAEGfthGPFSH--VVIAT 158
Cdd:PRK01747 414 LLalagQQLTIHFGHEVARLEREDDGWQLDFAGG---TLASApvVVLAN 459
PLN03000 PLN03000
amine oxidase
 5-59 5.78e-04

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 41.54  E-value: 5.78e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRMSSKRSDAGSL----DMGAQYFT 59
Cdd:PLN03000 187 VVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKMEANRVgaaaDLGGSVLT 245
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 5-41 9.55e-04

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 40.36  E-value: 9.55e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGGRM 41
Cdd:PRK12770  21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLM 57
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
 5-35 9.55e-04

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 40.78  E-value: 9.55e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSR 35
Cdd:PRK12409   4 IAVIGAGITGVTTAYALAQRGYQVTVFDRHR 34
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 5-52 1.89e-03

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 39.84  E-value: 1.89e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGG---RMSSKRSDAGSLD 52
Cdd:PLN02172  13 VAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGlwvYTPKSESDPLSLD 63
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
1-52 2.13e-03

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 39.39  E-value: 2.13e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFdkSRGSGG-RMSSkrsdaGSLD 52
Cdd:COG3075    1 MKFDVVVIGGGLAGLTAAIRAAEAGLRVAIV--SAGQSAlHFSS-----GSLD 46
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 5-32 2.15e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 39.22  E-value: 2.15e-03
                          10        20
                  ....*....|....*....|....*...
gi 576713583    5 IAIIGTGIAGLSAAQALTEAGHTVQLFD 32
Cdd:pfam07992   3 VVVIGGGPAGLAAALTLAQLGGKVTLIE 30
PRK08268 PRK08268
3-hydroxy-acyl-CoA dehydrogenase; Validated
 3-32 2.25e-03

3-hydroxy-acyl-CoA dehydrogenase; Validated


Pssm-ID: 236211 [Multi-domain]  Cd Length: 507  Bit Score: 39.44  E-value: 2.25e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 576713583   3 VPIAIIGTGIAGLSAAQALTEAGHTVQLFD 32
Cdd:PRK08268   8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYD 37
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
5-32 2.47e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 39.12  E-value: 2.47e-03
                         10        20
                 ....*....|....*....|....*...
gi 576713583   5 IAIIGTGIAGLSAAQALTEAGHTVQLFD 32
Cdd:PRK07494  10 IAVIGGGPAGLAAAIALARAGASVALVA 37
PRK08163 PRK08163
3-hydroxybenzoate 6-monooxygenase;
1-71 2.99e-03

3-hydroxybenzoate 6-monooxygenase;


Pssm-ID: 181262 [Multi-domain]  Cd Length: 396  Bit Score: 39.25  E-value: 2.99e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGgrmsskRSDAGsLDMGAQYFTARDRRFVTEVQR 71
Cdd:PRK08163   3 KVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG------EIGAG-IQLGPNAFSALDALGVGEAAR 66
NAD_binding_2 pfam03446
NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of ...
 5-35 4.75e-03

NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.


Pssm-ID: 427298 [Multi-domain]  Cd Length: 159  Bit Score: 37.06  E-value: 4.75e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 576713583    5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSR 35
Cdd:pfam03446   2 IGFIGLGVMGSPMALNLLKAGYTVTVYNRTP 32
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
1-52 5.70e-03

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 38.29  E-value: 5.70e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFdkSRGSGG-RMSSkrsdaGSLD 52
Cdd:PRK05329   1 MKFDVLVIGGGLAGLTAALAAAEAGKRVALV--AKGQGAlHFSS-----GSID 46
PLN02676 PLN02676
polyamine oxidase
 7-55 6.72e-03

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 38.16  E-value: 6.72e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 576713583   7 IIGTGIAGLSAAQALTEAGHT-VQLFDKSRGSGGRMSSKRSDAGSLDMGA 55
Cdd:PLN02676  31 IVGAGMSGISAAKTLSEAGIEdILILEATDRIGGRMRKANFAGVSVELGA 80
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 1-43 7.66e-03

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 37.89  E-value: 7.66e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 576713583   1 MTVPIAIIGTGIAGLSAAQALTEAGHTVQLFDKS--RGSGGRMSS 43
Cdd:COG1053    2 HEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVppRGGHTAAAQ 46
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 5-39 8.69e-03

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 37.65  E-value: 8.69e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 576713583    5 IAIIGTGIAGLSAAQALTEAGHTVQLFDKSRGSGG 39
Cdd:pfam00890   2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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