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Conserved domains on  [gi|578272094|gb|EUM32014|]
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hypothetical protein L462_00176 [Enterobacter sp. BIDMC 26]

Protein Classification

DUF2496 domain-containing protein( domain architecture ID 10013714)

DUF2496 domain-containing protein similar to Escherichia coli protein YbaM

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11038 PRK11038
hypothetical protein; Provisional
 1-47 4.84e-21

hypothetical protein; Provisional


:

Pssm-ID: 182920  Cd Length: 47  Bit Score: 76.59  E-value: 4.84e-21
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 578272094  1 MSLENAPDEVKLAVDLIMLLENHDIPAQTVLKALEIVKTDFEGKVKA 47
Cdd:PRK11038  1 MSLENAPDEVKLAVDLIYLLEENEIPPRTALAALEIVKRDYEKKLKS 47
 
Name Accession Description Interval E-value
PRK11038 PRK11038
hypothetical protein; Provisional
 1-47 4.84e-21

hypothetical protein; Provisional


Pssm-ID: 182920  Cd Length: 47  Bit Score: 76.59  E-value: 4.84e-21
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 578272094  1 MSLENAPDEVKLAVDLIMLLENHDIPAQTVLKALEIVKTDFEGKVKA 47
Cdd:PRK11038  1 MSLENAPDEVKLAVDLIYLLEENEIPPRTALAALEIVKRDYEKKLKS 47
DUF2496 pfam10689
Protein of unknown function (DUF2496); This family consists of proteins from ...
 2-44 4.27e-19

Protein of unknown function (DUF2496); This family consists of proteins from Gammaproteobacteria spp. Many members are annotated as being like the E coli protein YbaM.


Pssm-ID: 431437  Cd Length: 43  Bit Score: 71.54  E-value: 4.27e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 578272094   2 SLENAPDEVKLAVDLIMLLENHDIPAQTVLKALEIVKTDFEGK 44
Cdd:pfam10689  1 SLENAPEEVKLAVDLIYLLESNQIEPETALAALEIVKRDFEKK 43
 
Name Accession Description Interval E-value
PRK11038 PRK11038
hypothetical protein; Provisional
 1-47 4.84e-21

hypothetical protein; Provisional


Pssm-ID: 182920  Cd Length: 47  Bit Score: 76.59  E-value: 4.84e-21
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 578272094  1 MSLENAPDEVKLAVDLIMLLENHDIPAQTVLKALEIVKTDFEGKVKA 47
Cdd:PRK11038  1 MSLENAPDEVKLAVDLIYLLEENEIPPRTALAALEIVKRDYEKKLKS 47
DUF2496 pfam10689
Protein of unknown function (DUF2496); This family consists of proteins from ...
 2-44 4.27e-19

Protein of unknown function (DUF2496); This family consists of proteins from Gammaproteobacteria spp. Many members are annotated as being like the E coli protein YbaM.


Pssm-ID: 431437  Cd Length: 43  Bit Score: 71.54  E-value: 4.27e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 578272094   2 SLENAPDEVKLAVDLIMLLENHDIPAQTVLKALEIVKTDFEGK 44
Cdd:pfam10689  1 SLENAPEEVKLAVDLIYLLESNQIEPETALAALEIVKRDFEKK 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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